mRNA_P-wetherbeei_contig7117.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7117.2.1
Unique NamemRNA_P-wetherbeei_contig7117.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7117.2.1 vs. uniprot
Match: A0A835YVB9_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB9_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.960e-43
Identity = 72/130 (55.38%), Postives = 100/130 (76.92%), Query Frame = 1
Query:    1 STLFTARLRGSIEYVSIKRVRKSNASPSFAVELRLMRQLSFPNIVKLLAAHETQNSIWIVMEPCAGGDLAAVLQQDGFEPEHAVRGFGVDLMAGLQHLHSAGVLHCDLRPCNVLLDEHGTLKLSGFGLAR 390
            S ++  RL+ SIEYV+IKRV KS    S   E++ + +L  PN++K    +ET+N++W+++E CAGG L ++++QDG EPE AVR FGVDLMAGLQH+H+AG+LHCDLRP N+L+DE+G LKLSGF  A+
Sbjct:   16 SQVYKGRLKMSIEYVAIKRVDKSRMD-SVVTEVQAIHRLCSPNVLKFHDWYETRNNVWLILEYCAGGSLKSLIEQDGGEPESAVRLFGVDLMAGLQHVHAAGLLHCDLRPANILVDEYGILKLSGFSCAQ 144          
BLAST of mRNA_P-wetherbeei_contig7117.2.1 vs. uniprot
Match: A0A6H5JTL8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL8_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 3.850e-37
Identity = 71/130 (54.62%), Postives = 96/130 (73.85%), Query Frame = 1
Query:    1 STLFTARLRGSIEYVSIKRVRKSNASPSFAVELRLMRQLSFPNIVKLLAAHETQNSIWIVMEPCAGGDLAAVLQQDGFEPEHAVRGFGVDLMAGLQHLHSAGVLHCDLRPCNVLLDEHGTLKLSGFGLAR 390
            S +F  R +  IEYV+IKRV KS    S   E++++ +LS PN++K    +ET+N++W+++E C+GGDL  +++QD  EPE AVR FGVDL+AGLQ  H+ G LH DLRP NVL+DE+G LKLSGFGLAR
Sbjct:   16 SQVFKGREKMDIEYVAIKRVEKSRME-SIVKEVQVIHRLSSPNVLKFYDWYETRNNVWLILEFCSGGDLLTLIKQDHQEPESAVRLFGVDLLAGLQQTHACGYLHGDLRPSNVLIDEYGILKLSGFGLAR 144          
BLAST of mRNA_P-wetherbeei_contig7117.2.1 vs. uniprot
Match: D7G7P3_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P3_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 5.050e-37
Identity = 71/130 (54.62%), Postives = 95/130 (73.08%), Query Frame = 1
Query:    1 STLFTARLRGSIEYVSIKRVRKSNASPSFAVELRLMRQLSFPNIVKLLAAHETQNSIWIVMEPCAGGDLAAVLQQDGFEPEHAVRGFGVDLMAGLQHLHSAGVLHCDLRPCNVLLDEHGTLKLSGFGLAR 390
            S +F  R +  IEYV+IKRV KS    S   E++++ +LS PN++K    +ET+N++W+++E C GGDL  +++QD  EPE AVR FGVDL+AGLQ  H+ G LH DLRP NVL+DE+G LKLSGFGLAR
Sbjct:   16 SQVFKGREKMDIEYVAIKRVEKSRME-SIVKEVQVIHRLSSPNVLKFYDWYETRNNVWLILEFCTGGDLLTLIKQDHQEPESAVRLFGVDLLAGLQQTHACGYLHGDLRPSNVLIDEYGILKLSGFGLAR 144          
BLAST of mRNA_P-wetherbeei_contig7117.2.1 vs. uniprot
Match: A0A7S3HE98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HE98_9STRA)

HSP 1 Score: 128 bits (321), Expect = 9.940e-34
Identity = 59/126 (46.83%), Postives = 93/126 (73.81%), Query Frame = 1
Query:    1 STLFTARLRGSIEYVSIKRVRKSNASPSFAVELRLMRQLSFPNIVKLLAAHETQNSIWIVMEPCAGGDLAAVLQQDGFEPEHAVRGFGVDLMAGLQHLHSAGVLHCDLRPCNVLLDEHGTLKLSGF 378
            S +F  R +  IEYV+IKR+ KS  S   + E+++M +LS  +++K    +ET+N++W+++E C GGDL A+++QDG  PE +VR FG+D++A ++++H  G+LHCD+RPCN L+DE+G LKLS F
Sbjct:    5 SQVFKGREKKKIEYVAIKRIEKSMMSKVVS-EVQVMHKLSCAHMLKFHDWYETRNNLWLILEYCTGGDLEALIKQDGHLPETSVRIFGLDIVAAIKYMHGEGMLHCDIRPCNFLVDEYGILKLSDF 129          
BLAST of mRNA_P-wetherbeei_contig7117.2.1 vs. uniprot
Match: F0Y9X4_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9X4_AURAN)

HSP 1 Score: 125 bits (314), Expect = 1.560e-33
Identity = 60/130 (46.15%), Postives = 91/130 (70.00%), Query Frame = 1
Query:    1 STLFTARLRGSIEYVSIKRVRKSNASPSFAVELRLMRQLSFPNIVKLLAAHETQNSIWIVMEPCAGGDLAAVLQQDGFEPEHAVRGFGVDLMAGLQHLHSAGVLHCDLRPCNVLLDEHGTLKLSGFGLAR 390
            S +F  R + ++ YV+IKR+ K         E+++M  LS P+ +K    +ET+N++W+++E C+GGDL ++L+ D   P  AV  FG DL++GLQ+LH  G+L+CDL+P NVL+D+HG LKL+GFGLAR
Sbjct:   15 SQVFKGRQKKTVNYVAIKRIEKGQMD-KVVNEVQMMHALSHPHTLKFYDWYETRNNLWLILEYCSGGDLKSLLKVDKQLPIPAVTLFGGDLLSGLQYLHHNGLLYCDLKPSNVLIDDHGVLKLAGFGLAR 143          
BLAST of mRNA_P-wetherbeei_contig7117.2.1 vs. uniprot
Match: A0A7S3K321_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K321_9STRA)

HSP 1 Score: 131 bits (329), Expect = 7.680e-33
Identity = 61/130 (46.92%), Postives = 94/130 (72.31%), Query Frame = 1
Query:    1 STLFTARLRGSIEYVSIKRVRKSNASPSFAVELRLMRQLSFPNIVKLLAAHETQNSIWIVMEPCAGGDLAAVLQQDGFEPEHAVRGFGVDLMAGLQHLHSAGVLHCDLRPCNVLLDEHGTLKLSGFGLAR 390
            S +F  R + ++ YV+IKRV K         E+++M  LS P+ +K    +ET+N++W+++E C+GGDL ++L+ DG  P  +V+ FG DL+AGLQ+LH +G+L+CDL+P N+L+DE+G LKL+GFGLAR
Sbjct:   16 SQVFKGRCKKTVNYVAIKRVEKGQME-KVVNEVQMMHCLSHPHTLKFYDWYETRNNLWLILEYCSGGDLKSLLRSDGQLPLRSVKLFGGDLLAGLQYLHYSGILYCDLKPSNILIDEYGVLKLAGFGLAR 144          
BLAST of mRNA_P-wetherbeei_contig7117.2.1 vs. uniprot
Match: A0A7S0R147_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R147_9CHLO)

HSP 1 Score: 125 bits (315), Expect = 9.220e-33
Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 1
Query:    1 STLFTARLRGSIEYVSIKRVRKSNASPSFAVELRLMRQLSFPNIVKLLAAHETQNSIWIVMEPCAGGDLAAVLQQDGFEPEHAVRGFGVDLMAGLQHLHSAGVLHCDLRPCNVLLDEHGTLKLSGFGLAR 390
            S ++  R + SI+Y +IK V K N       E+R M  L   NI+K  A +ETQN +W+V+E C GGDL  +L+QD   PE AV GF VDL+  L  LHS G+++CDL+P NVLLDE+G LKL  FGL R
Sbjct:   16 SVVYKGRKKKSIKYYAIKSVEK-NQRARVLQEVRTMHALDHDNILKFYAWYETQNHLWLVLEYCVGGDLLTILRQDVRLPEDAVHGFAVDLVTALSFLHSHGLVYCDLKPSNVLLDENGHLKLGDFGLTR 144          
BLAST of mRNA_P-wetherbeei_contig7117.2.1 vs. uniprot
Match: A0A2D4BXX3_PYTIN (ULK/ULK protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXX3_PYTIN)

HSP 1 Score: 124 bits (312), Expect = 1.030e-32
Identity = 63/130 (48.46%), Postives = 89/130 (68.46%), Query Frame = 1
Query:    1 STLFTARLRGSIEYVSIKRVRKSNASPSFAVELRLMRQLSFPNIVKLLAAHETQNSIWIVMEPCAGGDLAAVLQQDGFEPEHAVRGFGVDLMAGLQHLHSAGVLHCDLRPCNVLLDEHGTLKLSGFGLAR 390
            S ++ AR + SIEYV++K   KS        E++L+ +L   +I+K    +E+QN IW++ E C GGDL  ++ QD   PE AVR FG DL+AGLQ+LHS G++ CDL+P N+L+DE G+LKL+ FGLAR
Sbjct:   16 SFVYKARRKRSIEYVAVKSTVKSRMD-KILNEVQLLHKLDNRHILKFFNWYESQNHIWLIFEYCMGGDLLNLITQDRQLPEKAVRSFGWDLVAGLQYLHSQGIIFCDLKPANILIDECGSLKLADFGLAR 144          
BLAST of mRNA_P-wetherbeei_contig7117.2.1 vs. uniprot
Match: A0A2D4CKA7_PYTIN (ULK/ULK protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CKA7_PYTIN)

HSP 1 Score: 124 bits (312), Expect = 2.310e-32
Identity = 63/130 (48.46%), Postives = 89/130 (68.46%), Query Frame = 1
Query:    1 STLFTARLRGSIEYVSIKRVRKSNASPSFAVELRLMRQLSFPNIVKLLAAHETQNSIWIVMEPCAGGDLAAVLQQDGFEPEHAVRGFGVDLMAGLQHLHSAGVLHCDLRPCNVLLDEHGTLKLSGFGLAR 390
            S ++ AR + SIEYV++K   KS        E++L+ +L   +I+K    +E+QN IW++ E C GGDL  ++ QD   PE AVR FG DL+AGLQ+LHS G++ CDL+P N+L+DE G+LKL+ FGLAR
Sbjct:   16 SFVYKARRKRSIEYVAVKSTVKSRMD-KILNEVQLLHKLDNRHILKFFNWYESQNHIWLIFEYCMGGDLLNLITQDRQLPEKAVRSFGWDLVAGLQYLHSQGIIFCDLKPANILIDECGSLKLADFGLAR 144          
BLAST of mRNA_P-wetherbeei_contig7117.2.1 vs. uniprot
Match: A0A7S2MMZ0_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2MMZ0_9DINO)

HSP 1 Score: 119 bits (298), Expect = 3.070e-32
Identity = 58/124 (46.77%), Postives = 84/124 (67.74%), Query Frame = 1
Query:   19 RLRGSIEYVSIKRVRKSNASPSFAVELRLMRQLSFPNIVKLLAAHETQNSIWIVMEPCAGGDLAAVLQQDGFEPEHAVRGFGVDLMAGLQHLHSAGVLHCDLRPCNVLLDEHGTLKLSGFGLAR 390
            R R +I YV++K + KS        E+R++ QL  P++V  +  +ET+N +WI+ E CAGGDL  +++QDG  PE  VR FG D+  GL H+HS G+++ DL+P N+LLDE G L+LSGFG A+
Sbjct:    1 RKRYTIRYVAVKSIEKSRRE-KVMTEVRVLSQLQHPSVVGFVNWYETRNHLWIIFEYCAGGDLLHLMKQDGRLPEPQVRNFGEDICGGLLHVHSRGIIYSDLKPGNLLLDEGGGLRLSGFGHAQ 123          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7117.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVB9_9STRA2.960e-4355.38Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5JTL8_9PHAE3.850e-3754.62Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G7P3_ECTSI5.050e-3754.62Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S3HE98_9STRA9.940e-3446.83Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
F0Y9X4_AURAN1.560e-3346.15Protein kinase domain-containing protein (Fragment... [more]
A0A7S3K321_9STRA7.680e-3346.92Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S0R147_9CHLO9.220e-3350.00Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A2D4BXX3_PYTIN1.030e-3248.46ULK/ULK protein kinase n=1 Tax=Pythium insidiosum ... [more]
A0A2D4CKA7_PYTIN2.310e-3248.46ULK/ULK protein kinase n=1 Tax=Pythium insidiosum ... [more]
A0A7S2MMZ0_9DINO3.070e-3246.77Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7117contigP-wetherbeei_contig7117:2177..2887 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G7P3
PFAMsLigB,Pkinase
Model size390
Max annot lvl2759|Eukaryota
KEGG rclassRC00387
KEGG koko:K15777,ko:K17545
KEGG ReactionR08836
KEGG Pathwayko00965,map00965
Hectar predicted targeting categorymitochondrion
Exons3
Evalue8.28e-38
EggNOG OGsKOG0597@1|root,KOG0597@2759|Eukaryota
EC2.7.11.1
Descriptionpositive regulation of hh target transcription factor activity
Cds size390
COG categoryS
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186959.4836497-CDS-P-wetherbeei_contig7117:2176..24011683186959.4836497-CDS-P-wetherbeei_contig7117:2176..2401Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7117 2177..2401 +
1683186959.4970498-CDS-P-wetherbeei_contig7117:2561..26621683186959.4970498-CDS-P-wetherbeei_contig7117:2561..2662Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7117 2562..2662 +
1683186959.5073442-CDS-P-wetherbeei_contig7117:2823..28871683186959.5073442-CDS-P-wetherbeei_contig7117:2823..2887Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7117 2824..2887 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7117.2.1prot_P-wetherbeei_contig7117.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7117 2177..2887 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7117.2.1

>prot_P-wetherbeei_contig7117.2.1 ID=prot_P-wetherbeei_contig7117.2.1|Name=mRNA_P-wetherbeei_contig7117.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp
STLFTARLRGSIEYVSIKRVRKSNASPSFAVELRLMRQLSFPNIVKLLAA
HETQNSIWIVMEPCAGGDLAAVLQQDGFEPEHAVRGFGVDLMAGLQHLHS
AGVLHCDLRPCNVLLDEHGTLKLSGFGLAR
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mRNA from alignment at P-wetherbeei_contig7117:2177..2887+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7117.2.1 ID=mRNA_P-wetherbeei_contig7117.2.1|Name=mRNA_P-wetherbeei_contig7117.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig7117:2177..2887+ (Phaeothamnion wetherbeei SAG_119_79)
TCCACCCTCTTCACTGCACGCCTTCGAGGAAGCATAGAATACGTGTCGAT AAAACGAGTGCGCAAGTCGAATGCCAGCCCCAGCTTTGCCGTAGAGCTAC GGCTGATGCGTCAACTCTCCTTCCCAAACATCGTAAAGCTGTTAGCCGCT CACGAGACGCAAAACAGCATCTGGATAGTGATGGAGCCTTGTGCTGGCGG AGATCTGGCTGCGGTCTTGCAGCAGGTAAGAAGAGCACAAAAGTATCTCG AAAGTTGTTTTGTCTTCAGATGCAGCAACAGCCCCAACGTTCTCAATACA ATGTTTCTTTGTCATCGTTTGTCATCGTGCCGCCCGCATCTTCCCAGAAG CACCCACAGCCCCCTGCTCTTGCTACATCCCACAGGACGGGTTTGAGCCG GAGCACGCTGTACGGGGCTTCGGTGTCGACCTCATGGCGGGCTTGCAGCA CCTCCACTCGGCAGGAGTGCTGCACTGTGACCTCCGGTAAGAGTCGAAGC CGCCTCTGATTCTTTCGAACGCTGCAGTCGACAAAGAGAAAGTTGCAACT TTCCATCTTTCTTTTCCTTGTCTAGACAGCAAAGTCGCATCTGGTGTGCA GCCATTATCTCCTCCGCTGTATCCCTGCAACAACTCACCGTGCGCAGGCC CTGCAACGTGCTGCTGGACGAGCATGGCACATTGAAACTGTCCGGCTTCG GGCTGGCGCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7117:2177..2887+

>mRNA_P-wetherbeei_contig7117.2.1 ID=mRNA_P-wetherbeei_contig7117.2.1|Name=mRNA_P-wetherbeei_contig7117.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig7117:2177..2887+ (Phaeothamnion wetherbeei SAG_119_79)
TCCACCCTCTTCACTGCACGCCTTCGAGGAAGCATAGAATACGTGTCGAT
AAAACGAGTGCGCAAGTCGAATGCCAGCCCCAGCTTTGCCGTAGAGCTAC
GGCTGATGCGTCAACTCTCCTTCCCAAACATCGTAAAGCTGTTAGCCGCT
CACGAGACGCAAAACAGCATCTGGATAGTGATGGAGCCTTGTGCTGGCGG
AGATCTGGCTGCGGTCTTGCAGCAGGACGGGTTTGAGCCGGAGCACGCTG
TACGGGGCTTCGGTGTCGACCTCATGGCGGGCTTGCAGCACCTCCACTCG
GCAGGAGTGCTGCACTGTGACCTCCGGCCCTGCAACGTGCTGCTGGACGA
GCATGGCACATTGAAACTGTCCGGCTTCGGGCTGGCGCGG
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