mRNA_P-wetherbeei_contig7115.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7115.1.1 vs. uniprot
Match: D7FJN4_ECTSI (VPS9 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN4_ECTSI) HSP 1 Score: 552 bits (1423), Expect = 2.160e-175 Identity = 306/489 (62.58%), Postives = 364/489 (74.44%), Query Frame = 1
Query: 1 QSPAGALWSLVRWLEQELPDVGIFSNSHRAGGGLPVMGDLQWKDVCQHLERFIFEQVFDQCLQAAPDYGAGDAEVTERLASLRFLKPRHWCVDFLDD--GGGGGAAGREWELAQRELCRIIECRCPMDMVDCVKACVRLVALSVEASLQRRHSESAGNSAKKK-KVISVGADDLLAALTWVA--ANPPRLASRLWYMCYYMRDAASGGGGEGAYCLTQLASALQFARSADASVLADVTQAQFDAGLARYAKTQAAIRAASFGDREGVEKLLFEDADPNGLSADQQHTVLTAAVAGRHVPVVKTVLQHPATEL---NVRVCPNYGRRRGRTALMLAAEGGDITVVLALLGRAGSEGRTAIDADGLNAVDYAKSAA---VASVLLADPAKVTLCQAAKAGNLQYVEALLLQSQDSNAT-DATGQFTPLVSATLLGNLAVMETLLRHPNCDVNKRNARGETALMYSVQREGHATPDSQVAAAVMLLAHGADR 1431
Q PA LWSL+RWLEQELPDVGIF+N+HRAGGGLP MG+LQW DV QHLER IFEQVFD+CL +AP YG GD E+ +LASLRFL+PRHWCVD L D G+ GREWELAQ ELCR++E RCP+DM+DCVKACV+LVALSVEASL +R E +S K ++ GADD+L ALTWV +NPPRLASRLW+ YYMR A G G EGAYCLTQLASAL+FAR ADASVLAD+++ + + GL ++ TQ I+AA GD E V L ADPNGLS+DQQ TVLTAA+ R V+K +L+ +++ N ++CPNYG RGR+ALM+AA GD+ VL+LL G + R A A+G +AVDYA VASVLLADPAK TLCQAAKAGNL YV+ALLLQ QD N T D TGQFTP+++A L ++ V+E+LL P CD N NARGETALMY QREG+AT D+QVAAAV LLA GADR
Sbjct: 1238 QGPAVMLWSLIRWLEQELPDVGIFNNNHRAGGGLPAMGELQWTDVKQHLERHIFEQVFDRCLTSAPVYGRGDEELAAKLASLRFLRPRHWCVDSLKDTDAESAGSYGREWELAQGELCRLVEYRCPLDMLDCVKACVKLVALSVEASLVKRQRELDPSSRSGGLKPVAFGADDILPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGMG-EGAYCLTQLASALEFARHADASVLADISEDELNEGLEKHKATQNLIKAAREGDSESVSYWLGAGADPNGLSSDQQFTVLTAAITHRRRGVIKILLEGAWSDMVDPNRQICPNYGVERGRSALMVAAAMGDMATVLSLLRIPGIDRRLAC-ANGKDAVDYAVQQGHLEVASVLLADPAKATLCQAAKAGNLSYVKALLLQGQDPNQTSDYTGQFTPIIAAAFLAHIEVLESLLESPLCDPNLPNARGETALMYCSQREGYATGDTQVAAAVKLLAKGADR 1724
BLAST of mRNA_P-wetherbeei_contig7115.1.1 vs. uniprot
Match: A0A835YQM7_9STRA (VPS9 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM7_9STRA) HSP 1 Score: 460 bits (1184), Expect = 5.870e-142 Identity = 293/628 (46.66%), Postives = 354/628 (56.37%), Query Frame = 1
Query: 1 QSPAGALWSLVRWLEQELPDVGIFSNSHRAGGGLPVMGDLQWKDVCQHLERFIFEQ-----------VFDQCLQAAPDYGAGDAEVTERLASLRFLKPRHWCVDFLDDGGGGGAAGREWELAQREL--------------------CRIIECRCPMDMVDCVKACVRLVALSVEAS-LQRRHSESA---------GNSAKKKKVISVGADDLLAALTWVA--ANPPR----------------------------------------------------LASRLWYMCYYMRDAASGGGGEGAYCLTQLASALQFARSADASVLADVTQAQFDAGLARYAKTQAAIRAASFGDREGVEKLLFEDADPNGLSADQQHTVLTAAVAGRHVPVVKTVLQHPATELNVRVCPNYGRRRGRTALMLAA------EGGDITVVLALLGRAGSEGRTAIDADGLNAVDYAK---------SAA-----VASVLLADPAKVTLCQAAKAGNLQYVEALLLQSQDSNATDATGQFTPLVSATLLGNLAVMETLLRHPNCDVN-------------------KRNARGETALMYSVQRE-----------------GHATPDSQVAAAVMLLAHGADR 1431
++P LWSLVRW EQEL +G+F+NSH+AGGGLPVMGDLQW+DV HLER IF+ VF++CL AAP+Y GDA + RLASLRFL+PRHWCVD LDDGGG GREWELAQREL CRI+ +CP D++ C++ACVRLVALSVEAS L +R + + AK++K + GADDLLAALTWV ANPP LASR+W+M Y+MR G GEG YCLTQLASA++FA+ DASVLAD+T+ + ++G+ +A TQA I A+ G+ + +LL E DPNGLS DQQ+T LTAAV G H+ V+K +L+H +T+ NV VCPNYG RGRTALMLAA E G + VL LL R G R A+GL AVDYA SAA VAS+LLADP +V L QA AG L YV ALL Q D+NA DATGQFTPL+ A L G + + LLR + DV +RNARGETAL+Y + RE G P QVA AV LLAHGADR
Sbjct: 1971 RAPPVMLWSLVRWTEQELQGLGVFNNSHKAGGGLPVMGDLQWRDVKHHLERHIFDMLLXXXXXXXXXVFERCLTAAPEYAEGDAAIAYRLASLRFLRPRHWCVDSLDDGGG---YGREWELAQRELXXXXXXXXXXXXXXXXXXXXCRIVHYKCPRDLMGCIRACVRLVALSVEASMLPKRITRLVDFCVALSVEASMAKRQKSVVFGADDLLAALTWVVVQANPPSAFXXXXXXXXXXXXYLGGEGDVDHVLREKNAPKRREAVGKPQTVDKSKQFYWLASRMWFMAYFMRQDDPEGIGEGGYCLTQLASAMEFAKECDASVLADITEEELESGIRAHATTQAMIEASLAGNAQRAAELLREGGDPNGLSTDQQNTALTAAVLGSHLDVMKVLLEHRSTDPNVTVCPNYGPNRGRTALMLAAQRGSLDERGSLDEVLLLL-RRGGVNRGVTCAEGLKAVDYALQGGHKASLLSAAILTSEVASILLADPDRVGLTQAVAAGALPYVRALLRQGCDANAVDATGQFTPLIVAALQGQMGAADVLLREGSADVAVVSIAAIRXXXXXXXXXVCRRNARGETALVYCMGREATQPARXXXXXXXXXXXGRTAPHQQVAFAVKLLAHGADR 2594
BLAST of mRNA_P-wetherbeei_contig7115.1.1 vs. uniprot
Match: A0A6H5KV84_9PHAE (VPS9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV84_9PHAE) HSP 1 Score: 333 bits (853), Expect = 9.660e-98 Identity = 224/491 (45.62%), Postives = 282/491 (57.43%), Query Frame = 1
Query: 22 WSLVRWLEQELPDVGIFSNSHRAGGGLPVMGDLQWKDVCQHLERFIFEQVFDQCLQAAPDYGAGDAEVTERLASLRFLKPRHWCVDFLDDGGGGGAAGREWELAQRELCRIIECRCPMDMVDCVKACVRLVALSVEASLQRRHSESAGNSAKKK-KVISVGADDLLAALTWVAANPPRLASRLWYMCYYMRDAASGGGGEGAYCLTQLASALQFARSADASVLADVTQAQFDAGLARYAKTQAAIRAASFGDREGVEKLLFEDADPNGLSADQQHTVLTAAVAGRHVPVVKTVLQHPATEL---NVRVCPNYGRRRGRTALMLAAEGGDITVVLALLGRAGSEGRTAIDADGLNAVDYA------------KSAA-----VASVLLADPAKVTLCQAAKAGNLQYVEALLLQSQDSNAT-DATGQFTPLVSATLLGNLAVMETLLRHPNCDVNKRNARGETALMYSVQREGHATPDSQVAAAVMLLAHGAD 1428
W + VGIF+N+HRAGGGLP MG+LQW DV QHLER IFEQ A + + A L +D D G+ GREWELAQ ELCR++E RCP+DM+DCVKACV+LVALSVEASL +R E +S K ++ GADD+L ALTWV G + TQ + ++ AR D+ + +++ G A T + E V L ADPNGLS+DQQ TVLTAA+ R V+K +L+ +++ N ++CPNYG RGR+ALM+AA GD+ VL+LL G + R A A+G +AVDYA K+AA VASVLLADPAK TLCQAAKAGNL YV+ALLLQ QD N T D TGQ+TP+++A LG++ V+E+LL P CD N NARGETALMY QREG+AT D+QV + LLA G D
Sbjct: 1130 WDTIFHQHHMETQVGIFNNNHRAGGGLPAMGELQWTDVKQHLERHIFEQ-------------ASGEQGQDNKAHL---------IDSAADVESAGSYGREWELAQGELCRLVEYRCPLDMLDCVKACVKLVALSVEASLVKRQRELDPSSRSGGLKPVACGADDILPALTWVVVQ-----------------------GLEKHKATQ--NLIKAAREGDSCIGVAISEEGNCVGRRFAAATSNPSCPQNMNGSESVSYWLGAGADPNGLSSDQQSTVLTAAITHRRRGVIKILLEGAWSKMVDPNRQICPNYGVDRGRSALMVAAAMGDMATVLSLLRIPGIDRRLAC-ANGKDAVDYAVQQGEKKRDLKEKAAAGGHLEVASVLLADPAKATLCQAAKAGNLSYVKALLLQGQDPNQTSDYTGQYTPIIAAAFLGHIEVLESLLESPLCDPNLPNARGETALMYCSQREGYATGDTQVK--IFLLARGRD 1570
BLAST of mRNA_P-wetherbeei_contig7115.1.1 vs. uniprot
Match: A0A7S3NHB6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NHB6_9STRA) HSP 1 Score: 134 bits (337), Expect = 9.680e-30 Identity = 150/540 (27.78%), Postives = 220/540 (40.74%), Query Frame = 1
Query: 1 QSPAGALWSLVRWLEQELPDVGIFSNSH-----RAGGGLPVMGDLQ-------WKDVCQHLERFIFEQVFDQCLQAAPDY-GAGDAEVTERLASLRFLK------------------------PRHWCVDFLDDGGGGGAAGREWELAQRELCRIIECRCPMDMVDCVKACVRLVALSVEASLQRRHSESAGNSAKKKKVISVGADDLLAALTW--VAANPPRLASRLWYMCYYMRDAASGGGGEGAYCLTQLASALQFARSA--DASVLAD-VTQAQFDAGLARYAKTQAAIRAASFGDREGVEKLLFEDADPNGLSADQQHTVLTAAVAGRHVPVVKTVLQHPAT----------------------------ELNVRVCP-----NYGRRRGRTALMLAAEGGDITVVLALLGRAGSEGRTAIDADGLNAVDYAKSAAVASVLLA-DPAKVTLCQAAKAGNLQY--------VEALLLQSQDSNATDATGQFTPLVSATLLGNLAVMETLLRHPNCDVNKRNARG----ETALMYSV 1356
+ P WS V + + L D G+ R+ GG+ W DV +H+E+ I ++F+ +QA+P+ GD ++ LA LRFL+ + + ++ G EW +AQ EL + + R P + +D + + VR +A +VEA R +A N+ +GAD+LL A+TW + ANPPRLAS LW++ Y RD E Y L++A+ FAR D L +++ FD G+ TQ A+ AA D + LL AD +G S DQ T L AA+ + V L + A+ + ++R N G R+G TALM+AA G+ V LL R +DA G +A A+ A A D T L Y LLL+ D N T P+V+A G++A + LL P DV+ G +TALM V
Sbjct: 520 KKPGSMFWSAVDFAVRFLKDKGLLGGPRTIPPGRSRGGIASGSSRTEEKEASFWADVRRHIEKKIMARIFEAIMQASPEARNKGDEALSLHLARLRFLRLADLGVVTKIRSSSKNDEATPIDDAKEEQIPMQEERNTPVEEGAEWVVAQYELFEVAQSRTPSEALDRLASSVRFIASAVEACSNRGRPLAAYNA--------IGADELLPAITWTVIQANPPRLASMLWFIDEYARDDMLRA--EYGYAYANLSAAVNFARETLVDVKPLEGLISKDDFDKGVKTAHLTQKAVDAALKKDARQLRLLLAAGADVSGPSVDQSTTPLVAAIESKEPECVAAALAYLASXXXXXXXXXXXXXXXXXXRVAAATNNQSQAHIRSSQVDAPINRGSRQGMTALMVAAALGETDAVCGLLALGADPER--VDARGRSAGHLARDAGYLDCAEALDCGSPTDPDFPDTNPLVYRALADVATTRGLLLRGADVNKTCGLLGCPPIVAAAAAGDVATLSALLSVPEVDVDACATSGPFAGQTALMRCV 1047
BLAST of mRNA_P-wetherbeei_contig7115.1.1 vs. uniprot
Match: A0A7S2FWS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWS3_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.320e-20 Identity = 114/381 (29.92%), Postives = 169/381 (44.36%), Query Frame = 1
Query: 217 AEVTERLASLRFLKPRHWCVDFLDDGGGGGAAGREWELAQRELCRIIECRCPMDMVDCVKACVRLVALSVEASLQRRHSESAGNSAKKKKVISVGADDLLAALTW--VAANPPRLASRLWYMCYYMRDAASGGGGEGAYCLTQLASALQFAR-----------SADASVLADVTQAQFDAGLARYA-----------------------KTQAAIRAASFGDREGVEKLL--FEDA----DPNGLSADQQHTVLTAAVAGRHVPVVKTVLQHPATELNV--RVCPNYGRRRGRTALMLAAEGG---DITVVLALLGRAGSEGRTAIDADGLNAVDYAKSAA---VASVLLADPAKVTLCQAAKAGNLQYVEALLLQSQDSN 1209
A + ERLA+LRF+ + F G EW AQ L R+ E M++ + R++ A+ Q+ +S G K SV ADDL+ A+ W + ANPP LASRLW++ ++ GE + + L +A++F+ +AD V+ + D G+ R + +TQ I A D + +L F D DPN L DQ+ T+L+AAV + + +K+VL T + V R+ P G RTALM+AA +VL LL AG+E R D +GL+A D A++ + V +L ADP + L A KA ++ LL Q N
Sbjct: 17 AGLPERLAALRFISLSRLGLSFAVPKDRD--MGDEWIFAQTLLSRMCEAESVWGMLEILTDAFRVIT----AATQKLQMKSCG------KRESVTADDLMPAIIWTVIQANPPNLASRLWFLDHFTEPNLFIRTGEAGFMIANLVAAVEFSLHLDPSSLTALDTADGGVVLPLKGGNDDDGVVRVSGDDEAMDSYLDSLSFEDAIKLNQRTQECIAAVETRDVNHLRRLCENFPDGTARIDPNALRVDQKETLLSAAVRSQSLSKLKSVLTTCGTRIRVDTRISPCRGPPSRRTALMIAAASPGPQSKDMVLELLS-AGAE-RLLRDGEGLSADDLARAISNTEVLEILRADPRHLNLLDAIKAQDMSLARGLLAQGARVN 383 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7115.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7115.1.1 >prot_P-wetherbeei_contig7115.1.1 ID=prot_P-wetherbeei_contig7115.1.1|Name=mRNA_P-wetherbeei_contig7115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=478bp QSPAGALWSLVRWLEQELPDVGIFSNSHRAGGGLPVMGDLQWKDVCQHLEback to top mRNA from alignment at P-wetherbeei_contig7115:44..3079+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7115.1.1 ID=mRNA_P-wetherbeei_contig7115.1.1|Name=mRNA_P-wetherbeei_contig7115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3036bp|location=Sequence derived from alignment at P-wetherbeei_contig7115:44..3079+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7115:44..3079+ >mRNA_P-wetherbeei_contig7115.1.1 ID=mRNA_P-wetherbeei_contig7115.1.1|Name=mRNA_P-wetherbeei_contig7115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1434bp|location=Sequence derived from alignment at P-wetherbeei_contig7115:44..3079+ (Phaeothamnion wetherbeei SAG_119_79)back to top |