mRNA_P-wetherbeei_contig7112.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7112.1.3 vs. uniprot
Match: D7G485_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G485_ECTSI) HSP 1 Score: 183 bits (465), Expect = 2.030e-46 Identity = 201/614 (32.74%), Postives = 253/614 (41.21%), Query Frame = 3
Query: 228 MEALKEAVAGALGALLSAVALYPLDIAKTHVQIDTPIVKKGRK----------SLTSEGTRAVE--KAGPRN-----------------VLARLALLLREHGFRRLFHGLDFKMLQTLASSFIYFYAYAWLKVAARRRQPGGR--------LAPVVNLLAAALAGAFNIMLTLPLENIVTHMQTR-----HIHDNDRGGDXXXXXXXXHSARGDCXXXXXXXXVSGSVGGCSGHSRAA--AATDSAGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMGSRLRVVRQLYAQRGSVARFWHGLAPSLALTSNPAINYTAFDYLKALYLRRLHRS------GGGXXXXXXXXXXXTAGKD-YLGPGSAFLVACVAKAVATVATYPLIRAKVVLMAHGHGGHDYXXXEAGDAPRTDTLPAVAVXXXXXXXXXXXXXXXXXXXXXXAGXXXXXXGSAGRITWRRPLHGEGSGNAEGVWAGVPLPDRRKVKGRAVAVPPQMEAVEPASRHDCSGGGGSAESDNXXXXXXXNSKISPCPVCCGSRIDAGFDSGNVGGGGGDSGGLALQQPRLGMLGALAAIVRDEGPGGLYAGCGGQLLHTILKSALLLVAKEEL 1916
+ AL +A+AGALG++++ YP+DIAKT Q +P+ + R S T E + A E + G N + A L+++ E G RL+ G++ K+LQ L SF+YFYAYA++K RR L P +NLLAAA+AGA N TLPLENI T MQT + +ND G+ + G V G A A AGG R S V +LY + G + RFW G APSL LT NPAINYTAFD LKAL+LRR + G XXXXX G + +L P AFLVA AK++AT+ TYPLIRAKVVLM AP + + P V G GS G+I GE +G EG G + A A +A + D G G ++ S + V S G G GG M L I R EG GGLYAGCG QLLHTILKSALLL KE++
Sbjct: 40 LAALSDALAGALGSVVAVAVFYPIDIAKTRAQASSPVTTRSRHDHDESSGGHGSSTEESSTAPEGGRVGSSNTALAGDGRRRVWFRSRTLAALLSIVRTEGGLTRLYEGIEAKVLQALLGSFVYFYAYAFIKGLMRRXXXXXXXXXXASKPLRPSLNLLAAAMAGAVNQAFTLPLENITTRMQTAPQRTPSVENND--GEGAGERGGHGAMEGSSPLDGRRCGVGNDTNGTWRDPVPATTAKVTQAGGDNQAPIKRGQR---------------------RPRQSVAAVTGELYREGGGLGRFWRGFAPSLILTCNPAINYTAFDILKALWLRRRDAAAVAAGVGSSTTAGASXXXXXXXGTEGFLNPLEAFLVAAAAKSLATLVTYPLIRAKVVLMT---------------APSSPSAPIVDRGRGNCSSPAVPPAASASQLITPKGHVFGSCGS-GKI-------GEPTG--EGRDGGDERLSNNGEERAATAXXXXADA-DATGMSDRGGSGHPIDAS-------LGSAAAESTVAASSASAVGRGEGTTGG------------EMHSMATVLVDIFRREGIGGLYAGCGAQLLHTILKSALLLATKEQI 585
BLAST of mRNA_P-wetherbeei_contig7112.1.3 vs. uniprot
Match: A0A835YZE1_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZE1_9STRA) HSP 1 Score: 138 bits (347), Expect = 5.140e-31 Identity = 150/365 (41.10%), Postives = 188/365 (51.51%), Query Frame = 3
Query: 228 MEALKEAVAGALGALLSAVALYPLDIAKTHVQI------DTPIVKKGRKSLTSEGTRAVEKA-----------GPRNVLARLALLLREHGFRRLFHGLDFKMLQTLASSFIYFYAYAWLKVAARRRQPGGRLAPV-VNLLAAALAGAFNIMLTLPLENIVTHMQTRHIHDNDRGG-DXXXXXXXXHSARGDCXXXXXXXXVSGSVGGCSGHSRAAAATDSAGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMGSRLRVVRQLYAQRGSVARFWHGLAPSLALTSNPAINYTAFDYLKALYLRRLHRSGGGXXXXXXXXXXXTAGKDYLGPGSAFLVACVAKAVATVATYPLIRAKVVLM 1265
M AL +A+AG++G+ ++A+ +PLD AKT VQ DT AVE++ G R + A L + RE G LF GLD K+L L+S FIYFYAYA+LKV PV ++LL AALAGA N++LTLP++N+ T +QT D H +G G + + + S GG XXXXXXXXXXXXXXXXXXXXXXX S V L+ + G V RFW GL PS+ LT NPAINYTAFD LKA YL R G ++LGP +AF +A AKAVAT+ TYPLIRAKV++M
Sbjct: 1 MAALADALAGSIGSCIAAILFFPLDTAKTRVQASHSGSSDTDGSGXXXXXXXXXXXSAVERSQRSDAAVRRVLGSRTLAALLDVYTRE-GPSALFRGLDAKVLSALSSGFIYFYAYAFLKV------------PVPLSLLTAALAGAINMLLTLPIDNVCTRLQTADAPAQPPARRDGESKAAVTHGETAQQTPSAVEAGDAGGDGNGAPQQQQHSEDVSVGGTPVATSLREXXXXXXXXXXXXXXXXXXXXXXX--XXSLSAAVADLHDE-GGVPRFWRGLLPSMILTCNPAINYTAFDALKAAYLARWVNRGRPPGHHA----------EFLGPLAAFGLAAAAKAVATLVTYPLIRAKVIMM 339
BLAST of mRNA_P-wetherbeei_contig7112.1.3 vs. uniprot
Match: A0A2D4BVE0_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVE0_PYTIN) HSP 1 Score: 123 bits (308), Expect = 6.150e-27 Identity = 116/351 (33.05%), Postives = 150/351 (42.74%), Query Frame = 3
Query: 231 EALKEAVAGALGALLSAVALYPLDIAKTHVQI----DTPIVKKGRKSLTSEGTRAVE-KAGPRNVLARLALLLREHGFRRLFHGLDFKMLQTLASSFIYFYAYAWLKVAARRRQPGGRLAPVVNLLAAALAGAFNIMLTLPLENIVTHMQTRHIHDNDRGGDXXXXXXXXHSARGDCXXXXXXXXVSGSVGGCSGHSRAAAATDSAGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMGSRLRVVRQLYAQRGSVARFWHGLAPSLALTSNPAINYTAFDYLKALYLRRLHRSGGGXXXXXXXXXXXTAGKDYLGPGSAFLVACVAKAVATVATYPLIRAKVVLMA 1268
+A +A AGA+GAL +AV LYPLD+ KT Q+ D+ S +GTRA+ K RN+ + R G LF GL KM T+ SSF FY Y++LK A RR G ++ NLL AALAGA N+ +TLPLE I T Q I D+D D DSA K S +V+++YA+ G V FW G PSL L SNP+INYT FD LK + + AF++A VAKA+AT+ TYP+IRAKV++ A
Sbjct: 13 KAFVDASAGAMGALFAAVLLYPLDVVKTRQQVAQDADSKSXTGADGSKRDDGTRALAPKPRQRNMWLLCWAIYRHEGLEGLFAGLSSKMAHTVFSSFAXFYWYSFLKQATERRT-GHAISTGANLLVAALAGALNMSMTLPLEMINTRAQ---ITDDDDSED-----------------------------------------DSAAXKPAHK-------------------------------STWAIVQEIYAENG-VLSFWKGYVPSLVLVSNPSINYTVFDSLKLRVQQWKQQRTNAKRLVALTML------------EAFVLAAVAKAIATIITYPVIRAKVLMQA 274
BLAST of mRNA_P-wetherbeei_contig7112.1.3 vs. uniprot
Match: F0WC73_9STRA (Mitochondrial Carrier (MC) Family putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WC73_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.920e-22 Identity = 104/353 (29.46%), Postives = 154/353 (43.63%), Query Frame = 3
Query: 234 ALKEAVAGALGALLSAVALYPLDIAKTHVQIDTPIVKKGRKSLTSEGTRAVEKAGPRNVLARLALLLREHGFRRLFHGLDFKMLQTLASSFIYFYAYAWLKVAARRR-QPGGRLAPVVNLLAAALAGAFNIMLTLPLENIVTHMQTRHIHDNDRGGDXXXXXXXXHSARGDCXXXXXXXXVSGSVGGCSGHSRAAAATDSAGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMGSRLRVVRQLYAQRGSVARFWHGLAPSLALTSNPAINYTAFDYLKALYLRRLHRSGGGXXXXXXXXXXXTAGKDYLGPGSAFLVACVAKAVATVATYPLIRAKVVLMAHGHGGHD 1289
A +A AGA+GAL++A+ LYPLDI KT Q D ++ + +AV + +++ L + +E G L+ GL+ K+L T+ S+F YFY Y++LK ++R G ++ + LL A LAGA N+ +TLPLE I T Q +D S ++ S ++Y + G +A FW G P+L LTSNP+INYT FD LK L+R +S TA + AFL+A ++KA+AT+ATYP+IRAKV++ + HD
Sbjct: 12 AFVDASAGAMGALVAAILLYPLDIVKTRHQAD--------RTYSESKLQAVSRKN--GIVSMLYRIYKEEGLSGLYAGLNSKILHTMISNFAYFYWYSFLKHLTQKRWMKGKQITTSLRLLIATLAGAINMTMTLPLEVINTRAQLSTENDT------------------------------------SPKTKGILPLSS----------------------------------------------EIYHEDGLMA-FWRGYVPALVLTSNPSINYTIFDQLKDT-LQRWKQSN---MTKHSQQATFTALE-------AFLLAAISKAIATIATYPIIRAKVLMQSEKQSTHD 260
BLAST of mRNA_P-wetherbeei_contig7112.1.3 vs. uniprot
Match: A0A024GMU3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GMU3_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.730e-22 Identity = 108/349 (30.95%), Postives = 153/349 (43.84%), Query Frame = 3
Query: 234 ALKEAVAGALGALLSAVALYPLDIAKTHVQIDTPIVKKGRKSLTSEGTRAVEKAGPRNVLARLALLLREHGFRRLFHGLDFKMLQTLASSFIYFYAYAWLKVAARRRQPGGR-LAPVVNLLAAALAGAFNIMLTLPLENIVTHMQTRHIHDNDRGGDXXXXXXXXHSARGDCXXXXXXXXVSGSVGGCSGHSRAAAATDSAGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMGSRLRVVRQLYAQRGSVARFWHGLAPSLALTSNPAINYTAFDYLKALYLRRLHRSGGGXXXXXXXXXXXTAGKDYLGPGSAFLVACVAKAVATVATYPLIRAKVVLMAHGH 1277
A +A AGA+GAL++A+ LYPLD+ KT Q + R S+ V K G +++L R+ +E G L+ GL+ K+L T+ S+F YFY Y++LK ++R G+ L ++LL A LAGA N+ +TLPLE I T Q SA+ + GS ++Y + G A FW G AP+L LTSNP+INYT FD LK L+R R+ TA + AFL+A ++KA+ATV TYP+IRAKV++ + H
Sbjct: 11 AFVDASAGAMGALVAAILLYPLDVVKTRHQAE-------RTYPDSKSGAIVRKNGIKSMLYRI---YKEEGPSGLYAGLNSKILHTMISNFAYFYWYSFLKHFTQKRWTKGKQLTTSLSLLVATLAGAINMTMTLPLEVINTRAQL--------------------SAKNETKFKSKGVFALGS--------------------------------------------------------------EIYHEDGLTA-FWRGYAPALVLTSNPSINYTIFDTLKDT-LQRWKRTA---LTKHCQRATFTALE-------AFLLAAISKAIATVVTYPIIRAKVLMQSEKH 255
BLAST of mRNA_P-wetherbeei_contig7112.1.3 vs. uniprot
Match: A0A8K1FIS1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIS1_PYTOL) HSP 1 Score: 102 bits (255), Expect = 6.170e-20 Identity = 102/348 (29.31%), Postives = 144/348 (41.38%), Query Frame = 3
Query: 231 EALKEAVAGALGALLSAVALYPLDIAKTHVQIDTPIVKKGRKSLTSEGTRAVEK--AGPRNVLARLALLLREHGFRRLFHGLDFKMLQTLASSFIYFYAYAWLKVAARRRQPGGRLAPVVNLLAAALAGAFNIMLTLPLENIVTHMQTRHIHDNDRGGDXXXXXXXXHSARGDCXXXXXXXXVSGSVGGCSGHSRAAAATDSAGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMGSRLRVVRQLYAQRGSVARFWHGLAPSLALTSNPAINYTAFDYLKALYLRRLHRSGGGXXXXXXXXXXXTAGKDYLGPGSAFLVACVAKAVATVATYPLIRAKVVLMA 1268
+A +A AGA+GA+ +AV LYPLD+ KT Q+ K ++ T+ ++ R++ A L+ + G LF GL K++ T SSF YFY Y++LK A RR G + +NL+ AALAGA N+ +TLPLE I T X TD + S + +++YA+ G ++ FW G PSL L SNP+IN+T FD LK A L AF++A +AKA+ATV TYP+IRAKV++ A
Sbjct: 14 KAFVDASAGAMGAVFAAVLLYPLDVVKTRQQVAVDDSKDKKEEDKEAKTQQLQPHVKKQRSMWALCWLIYKAEGVEGLFAGLSSKVVHTFISSFAYFYWYSFLKQATERRTGKG-ITTGMNLIVAALAGALNMSMTLPLEMINTRXXXXXXXXXXXXXXXD------------------------------------TTTDKTAPQHK---------------------------------SMWDLTKEIYAEDGLLS-FWKGYIPSLVLVSNPSINFTIFDKLKL------------NVQEWKTQRAQAARLVALTAFEAFVIAAIAKAIATVLTYPIIRAKVLMQA 278
BLAST of mRNA_P-wetherbeei_contig7112.1.3 vs. uniprot
Match: A0A4D9D199_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D199_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.770e-18 Identity = 101/376 (26.86%), Postives = 149/376 (39.63%), Query Frame = 3
Query: 234 ALKEAVAGALGALLSAVALYPLDIAKTHVQIDTPIVKKGRKSL-----------------TSEGTR------AVEKAGPRNVLARLALLLREHGFRRLFHGLDFKMLQTLASSFIYFYAYAWLKVAARR--RQPGGRLAPVVNLLAAALAGAFNIMLTLPLENIVTHMQTRHIHDNDRGGDXXXXXXXXHSARGDCXXXXXXXXVSGSVGGCSGHSRAAAATDSAGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMGSRLRVVRQLYAQRGSVARFWHGLAPSLALTSNPAINYTAFDYLKALYLRRLHRSGGGXXXXXXXXXXXTAGKDYLGPGSAFLVACVAKAVATVATYPLIRAKVVLMAHGHGGH 1286
A EA GA+GAL + + YPLD+AK +Q + ++GR TSE V+K GPR L + ++L++ + GL K+ ++ S+FIYFY Y LK R ++P + + NL A++AG N++LT+PL+ +VT +Q G + S H A MG + V+R+L ARFWHG P+L LTSNPAINY A+D +K L G+ + FL+ ++K +AT+ TYPLIRAKV++M+ H
Sbjct: 10 AFAEATGGAIGALWTTLLFYPLDVAKLRLQAEADSEEEGRNDEDYDVGREKGFTPKVNTDTSEDASRLHALTTVQKKGPRTFLGEVLVVLKQPELW--YAGLGLKLQLSVLSTFIYFYVYTALKRVFTRAFKRP---VTFLPNLALASMAGVVNVLLTMPLDTLVTRLQVAPAGQRPSLGKMLRLVWEEDGPDREPVVKP------------SSHEEGACGVG--------------------------------------MGGVMPVLRRL-------ARFWHGCLPALLLTSNPAINYAAYDAMKTLV-------------------PLPQGRRHHNVRETFLIGMLSKFLATLITYPLIRAKVIMMSDTKRAH 304
BLAST of mRNA_P-wetherbeei_contig7112.1.3 vs. uniprot
Match: A0A090LXN0_OSTTA (Mitochondrial substrate/solute carrier n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090LXN0_OSTTA) HSP 1 Score: 89.7 bits (221), Expect = 1.110e-15 Identity = 98/347 (28.24%), Postives = 142/347 (40.92%), Query Frame = 3
Query: 237 LKEAVAGALGALLSAVALYPLDIAKTHVQID--TPIVKKGRKSLTSEGTRAVEKAGPRNVLARLALLLREHGFRRLFHGLDFKMLQTLASSFIYFYAYAWLKVAARRRQPGGRLAPVVNLLAAALAGAFNIMLTLPLENIVTHMQTRHIHDNDRGGDXXXXXXXXHSARGDCXXXXXXXXVSGSVGGCSGHSRAAAATDSAGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMGSRLRVVRQLYAQRGSVAR-FWHGLAPSLALTSNPAINYTAFDYLKALYLRRLHRSGGGXXXXXXXXXXXTAGKDYLGPGSAFLVACVAKAVATVATYPLIRAKVVLMA 1268
L EAVAGALG +A+ALYP+D+ KT +Q + T ++ S ++ G V PR A L L+R G ++ G K ++ASSF+YFYA++ ++ R G ++ L++AALAG N+++T PL+ VT Q + TD+ GK + L+ +R + AR + GLA SLALT NPAI YTAF+ L+ + L+ T AF++ V+KA ATV TYPL+RAKV+ A
Sbjct: 21 LVEAVAGALGGAFAALALYPIDVVKTRIQAEGETSSDERDGASASARGRFRV----PRWARA-LRDLMRSEGVDGVYRGAMGKTAHSIASSFLYFYAFSGMRREYEART-GRKIGTGATLVSAALAGCVNVLVTEPLDTYVTRKQLK-------------------------------------------TKNTTKTTDAKEGKGSESDEG--------------------------LKETLKALRGASDSETAEARGLYSGLAASLALTINPAIQYTAFEQLRQRLMTMLNVRAQRHGILKPVVELSTF--------DAFILGAVSKAAATVLTYPLVRAKVLQKA 284
BLAST of mRNA_P-wetherbeei_contig7112.1.3 vs. uniprot
Match: A0A2P2IWL5_RHIMU (Peroxisomal adenine nucleotide carrier 1-like isoform X1 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2IWL5_RHIMU) HSP 1 Score: 77.4 bits (189), Expect = 9.390e-12 Identity = 52/147 (35.37%), Postives = 72/147 (48.98%), Query Frame = 3
Query: 228 MEALKEAVAGALGALLSAVALYPLDIAKTHVQIDTPIVKKGRKSLTSEGTRAVEKAGPRNVLARLALLLREHGFRRLFHGLDFKMLQTLASSFIYFYAYAWLKVAARRRQPGGRLAPVVNLLAAALAGAFNIMLTLPLENIVTHMQT 668
+E+L EA +GA+GAL S ALYPLD KT Q + RA + +NV + F L+ GL K LQ+ S FIYFY Y++ K + + P NL+ AA AGA +++T PL+ + MQT
Sbjct: 5 LESLSEATSGAIGALFSTTALYPLDTCKTKYQAEV---------------RAHHQRKYKNVADVFWEAISSRQFLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLEKSENKSIGPKANLIVAAAAGACTVIVTQPLDTASSRMQT 136
BLAST of mRNA_P-wetherbeei_contig7112.1.3 vs. uniprot
Match: A0A7S1NHX6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NHX6_9EUGL) HSP 1 Score: 77.0 bits (188), Expect = 1.260e-11 Identity = 45/106 (42.45%), Postives = 60/106 (56.60%), Query Frame = 3
Query: 948 SRLRVVRQLYAQRGSVARFWHGLAPSLALTSNPAINYTAFDYLKALYLRRLHRSGGGXXXXXXXXXXXTAGKDYLGPGSAFLVACVAKAVATVATYPLIRAKVVLM 1265
S + V++ +Y Q G + FW G+ PSL LTSNPAI +TAFD LK + L ++ D L +FL+A VAK +A V TYPLIRAKVV++
Sbjct: 142 SMMEVIKTIYEQDGGLGAFWSGIVPSLMLTSNPAITFTAFDQLKQMVAPMLGKT-----------------VDALSVSQSFLLASVAKCLALVLTYPLIRAKVVML 230 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7112.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7112.1.3 >prot_P-wetherbeei_contig7112.1.3 ID=prot_P-wetherbeei_contig7112.1.3|Name=mRNA_P-wetherbeei_contig7112.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=564bp MEALKEAVAGALGALLSAVALYPLDIAKTHVQIDTPIVKKGRKSLTSEGTback to top mRNA from alignment at P-wetherbeei_contig7112:4..2287- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7112.1.3 ID=mRNA_P-wetherbeei_contig7112.1.3|Name=mRNA_P-wetherbeei_contig7112.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2284bp|location=Sequence derived from alignment at P-wetherbeei_contig7112:4..2287- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7112:4..2287- >mRNA_P-wetherbeei_contig7112.1.3 ID=mRNA_P-wetherbeei_contig7112.1.3|Name=mRNA_P-wetherbeei_contig7112.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1692bp|location=Sequence derived from alignment at P-wetherbeei_contig7112:4..2287- (Phaeothamnion wetherbeei SAG_119_79)back to top |