mRNA_P-wetherbeei_contig710.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig710.1.1
Unique NamemRNA_P-wetherbeei_contig710.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig710.1.1 vs. uniprot
Match: A0A836CBU4_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU4_9STRA)

HSP 1 Score: 1120 bits (2898), Expect = 0.000e+0
Identity = 556/679 (81.89%), Postives = 612/679 (90.13%), Query Frame = 1 
Query:    4 VNPWTGKPYSRQYYDILAKRQTLPVHQFLDELTEKVKNNQVVVVEGETGSGKTTQIPQFLVEAGYGKVGSKLVACTQPRRVAAMSIAARVADEMDVPLGDVVGYNIRFEACISPRTVLAFLTDGMLLREAMNDPRRVSFPVRYSCIVLDEAHERTLATDVLMGLLKEVMIKRPDLKVVVMSATLDAGKFQTYFDNAPLLKVPGRMFPVETYYTPEPERDYVEAAIRTVVQIHRCEEPGDVLLFLTGEDEIEDACRRIRAETANLG--ESAGECVVYPLYSTLPPAQQKKIFTEAPGPKTPGGPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRAGRAGRTRPGKCFRLYTEKSFKEELLEQTYPEILRSKMSTVVLTLLKLGITDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTELGSQMSELPLDPQLSKMLLASPDYNCSNEVLTIVAMLSVPQVFMRPKEAAQAADRAKAQFAHMDGDHLTLLNAYHAYQQAGCSKDWCYENFINSRAMGSAESVREQLGRLMKRLNLPLVSTDFSSRDYYTNIKKAIVAGMFMQVAHLERSGHYLTVKDNQVVSLHPSCVLDGKPKWVCFEEFVLTTKNFIRTCTGVQPEWLVEIAPHYFDLENFPECEAKQDLEATYRRML 2034
            +NPWTG+PYS++YY+IL KR+TLPVHQFL EL  KV  NQVVVVEGETGSGKTTQIPQFLVEAGYG+VG   VACTQPRRVAAMSIA RV+DEMDV LGD+VGY+IRFE C S RT+L F+TDGMLLREAMNDP       +Y CIVLDEAHERTLATDVLMGLLKEV+ +RPDLKVVVMSATLDAGKFQTYFD+APLLKVPGRMFPVE +YTPEPERDYVEAA+RTVVQIHRCEEPGD+L+FLTGE EIE AC +IR+E A     E+ GE +VYPLYS+L P  Q+KIF +APGPK PGGPPGRKVVVSTNIAETSLTIDG+VYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQR+GRAGRTRPGKCFRLYTE+SF+EELLEQTYPEILRSKMSTVVLTLLKLG+ DLVHFDFMDPPAPETLMRALELLNYLGALDD+G LTE+GSQMSELP+DPQL+KML+ASPDYNCSNE+LTIVAMLSVPQVFMRPKEAA+ AD AKAQFAHMDGDHLT LNAYHAY+Q   +KDWC+ NFIN+R+MGSA++VREQL RLM+RLNLPL ST+F++RDYYTNIKKA+ AGMFMQVAH ERS HYLTVKDNQ+V +HPS  LD KP+WV FEEFVLT+KNFIRT T VQPEWLVEIAPHY+DL  FPECEAK  LEA YRRML
Sbjct:   32 MNPWTGQPYSQKYYEILTKRKTLPVHQFLQELLSKVAANQVVVVEGETGSGKTTQIPQFLVEAGYGQVGQFSVACTQPRRVAAMSIAQRVSDEMDVTLGDIVGYSIRFEICTSQRTILNFMTDGMLLREAMNDPMLA----KYKCIVLDEAHERTLATDVLMGLLKEVLKRRPDLKVVVMSATLDAGKFQTYFDSAPLLKVPGRMFPVEIFYTPEPERDYVEAAVRTVVQIHRCEEPGDILVFLTGELEIETACAQIRSECAQFAGSETVGEVMVYPLYSSLAPQAQQKIFRDAPGPKYPGGPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRSGRAGRTRPGKCFRLYTERSFQEELLEQTYPEILRSKMSTVVLTLLKLGVEDLVHFDFMDPPAPETLMRALELLNYLGALDDEGCLTEIGSQMSELPVDPQLAKMLIASPDYNCSNEILTIVAMLSVPQVFMRPKEAAKEADAAKAQFAHMDGDHLTFLNAYHAYKQNDGNKDWCFNNFINTRSMGSADNVREQLSRLMQRLNLPLKSTEFTNRDYYTNIKKALCAGMFMQVAHRERSDHYLTVKDNQIVGIHPSSALDSKPEWVIFEEFVLTSKNFIRTVTAVQPEWLVEIAPHYYDLSQFPECEAKHALEAVYRRML 706
[Close]
BLAST of mRNA_P-wetherbeei_contig710.1.1 vs. uniprot
Match: D7G1I0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I0_ECTSI)

HSP 1 Score: 1111 bits (2873), Expect = 0.000e+0
Identity = 554/678 (81.71%), Postives = 608/678 (89.68%), Query Frame = 1 
Query:    1 GVNPWTGKPYSRQYYDILAKRQTLPVHQFLDELTEKVKNNQVVVVEGETGSGKTTQIPQFLVEAGYGKVGSKLVACTQPRRVAAMSIAARVADEMDVPLGDVVGYNIRFEACISPRTVLAFLTDGMLLREAMNDPRRVSFPVRYSCIVLDEAHERTLATDVLMGLLKEVMIKRPDLKVVVMSATLDAGKFQTYFDNAPLLKVPGRMFPVETYYTPEPERDYVEAAIRTVVQIHRCEEPGDVLLFLTGEDEIEDACRRIRAETANLGESA--GECVVYPLYSTLPPAQQKKIFTEAPGPKTPGGPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRAGRAGRTRPGKCFRLYTEKSFKEELLEQTYPEILRSKMSTVVLTLLKLGITDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTELGSQMSELPLDPQLSKMLLASPDYNCSNEVLTIVAMLSVPQVFMRPKEAAQAADRAKAQFAHMDGDHLTLLNAYHAYQQAGCSKDWCYENFINSRAMGSAESVREQLGRLMKRLNLPLVSTDFSSRDYYTNIKKAIVAGMFMQVAHLERSGHYLTVKDNQVVSLHPSCVLDGKPKWVCFEEFVLTTKNFIRTCTGVQPEWLVEIAPHYFDLENFPECEAKQDLEATYRR 2028
            G+NP+TG PYSR+YYDIL KR+ LPVHQFLD+L +KVKNNQ VVVEGETGSGKTTQIPQFLVEAGYG +G   VACTQPRRVAAMSIA RV+DEMDV LGD+VGY+IRFE    PRT+L F+TDGMLLREAMNDP    F  +Y CIVLDEAHERTLATDVLMGL+KEV+  RPD++VVVMSATLDA KFQ YFDNAPLLKVPGR FPVE +YTP PERDYVEAA+RTVVQIH+CE+PGDVLLFLTGE EIEDACR IRAE     +    GE  VYPLYS+LPPA Q+KIF EAPGPK PGGP GRKVVVSTN+AETSLTIDG+VYVVDPGFSKQKVYNPRIRVESLLVSPISRASA+QR+GRAGRTRPGKCFRLYTE+SFKEELLEQTYPEILRSKMS  VLTLLKLG+ DLVHFDFMDPPAPETLMRALELLNYLGALDD+G+LT+LG++MSELPLDPQL+K+LLASPDY CSNEVL+IVAMLSVPQVFMRPKEA +AAD AKA+FAH+DGDHLTLLNAYHAY+Q G SKDWC+ NFINSR+M SAE+VREQLGRLM RL L +VST+F++RDYYTNIKKA+ AGMFMQVAHLERSGHYLTVKDNQVVS+HPS VLD KP W  FEEFVLT+KN+IRT TGVQ +WLVEIAPHYFDLENFPECEAK DLEA YRR
Sbjct:   29 GINPFTGAPYSRKYYDILEKRKKLPVHQFLDDLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVNLGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDP----FLAKYKCIVLDEAHERTLATDVLMGLIKEVLKNRPDMRVVVMSATLDAEKFQKYFDNAPLLKVPGRTFPVEIFYTPTPERDYVEAAVRTVVQIHKCEDPGDVLLFLTGEVEIEDACRAIRAEVEKSQDPTKEGELAVYPLYSSLPPAAQQKIFREAPGPKFPGGPVGRKVVVSTNVAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEQSFKEELLEQTYPEILRSKMSNTVLTLLKLGVEDLVHFDFMDPPAPETLMRALELLNYLGALDDEGSLTDLGNKMSELPLDPQLAKVLLASPDYGCSNEVLSIVAMLSVPQVFMRPKEAQKAADEAKAEFAHIDGDHLTLLNAYHAYKQNGGSKDWCFSNFINSRSMVSAENVREQLGRLMGRLELRMVSTEFTARDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQADWLVEIAPHYFDLENFPECEAKHDLEAVYRR 702
[Close]
BLAST of mRNA_P-wetherbeei_contig710.1.1 vs. uniprot
Match: A0A7S2UZ15_9STRA (RNA helicase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ15_9STRA)

HSP 1 Score: 1059 bits (2738), Expect = 0.000e+0
Identity = 522/680 (76.76%), Postives = 600/680 (88.24%), Query Frame = 1 
Query:    4 VNPWTGKPYSRQYYDILAKRQTLPVHQFLDELTEKVKNNQVVVVEGETGSGKTTQIPQFLVEAGYGKVGSKLVACTQPRRVAAMSIAARVADEMDVPLGDVVGYNIRFEACISPRTVLAFLTDGMLLREAMNDPRRVSFPVRYSCIVLDEAHERTLATDVLMGLLKEVMIKRPDLKVVVMSATLDAGKFQTYFDNAPLLKVPGRMFPVETYYTPEPERDYVEAAIRTVVQIHRCEEPGDVLLFLTGEDEIEDACRRIRAETANLGESAGECVVYPLYSTLPPAQQKKIFTEAPGPKTPGGPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRAGRAGRTRPGKCFRLYTEKSFKEELLEQTYPEILRSKMSTVVLTLLKLGITDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTELGSQMSELPLDPQLSKMLLASPDYNCSNEVLTIVAMLSVPQVFMRPKEAAQAADRAKAQFAHMDGDHLTLLNAYHAYQQAGCSKDWCYENFINSRAMGSAESVREQLGRLMKRLNLPLVSTDFSSRDYYTNIKKAIVAGMFMQVAHLERSGHYLTVKDNQVVSLHPSCVLDGKPKWVCFEEFVLTTKNFIRTCTGVQPEWLVEIAPHYFDLENFPECEAKQDLEATYRRMLQQL 2043
            +NP T KPYS +YY+IL KR TLPV+ FL++L  KV+ NQVV+VEGETGSGKTTQIPQFLVE GY K G   VACTQPRRVAAMSIA RVA+EMDV +G+ VGY IRFE C S  T+L F+TDGMLLREAM DP    F  +Y  IVLDEAHERTL+TDVLMGL+KE++ +R DLKVVVMSATLDA KFQ YF++APLLKVPGRM+PVE +Y PEPERDYVEAAIRTV+QIH+CEEPGD+LLFLTGE EIED CR++R E  N  E+ GE VV+PLYS+LPP QQ+ IF  APGP+ PGGPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPIS+ASA QR+GRAGRTRPGKCFRLYTEKSF +EL EQTYPEILRSKMS VVLTLLKLG+ DLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLT+LG++MSELPLDPQL+KM+LASP+++CSNE+L+IVAM+SVP +F+RPKEA +AAD  KAQFAH+DGDHLTLLN YHAY+QAG S++WCYE+FINSR+M +AE+VR+QL R+M R+ L LVSTDF+S++YYTNIKK +V+GMFMQVAHLER+GHYLTVKDNQVVS+HPS VLD KP WV +E+FVLTTKN+IRTCT V+ EWLVEIAPHY+DL NFP+CEAK +LE+ YRRML+ L
Sbjct:   45 LNPHTLKPYSAKYYEILRKRTTLPVYDFLEDLKAKVRGNQVVIVEGETGSGKTTQIPQFLVEDGYAKEGYYSVACTQPRRVAAMSIAQRVAEEMDVVMGEHVGYTIRFEDCTSQNTILKFMTDGMLLREAMADP----FLEKYKVIVLDEAHERTLSTDVLMGLVKELLNQRADLKVVVMSATLDALKFQEYFNSAPLLKVPGRMYPVEIFYVPEPERDYVEAAIRTVIQIHKCEEPGDILLFLTGEQEIEDTCRKLRDEAGNSDENEGEMVVFPLYSSLPPKQQQLIFQSAPGPRFPGGPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPISKASANQRSGRAGRTRPGKCFRLYTEKSFHQELQEQTYPEILRSKMSNVVLTLLKLGVEDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTDLGNRMSELPLDPQLAKMILASPEFHCSNEMLSIVAMVSVPTIFLRPKEAQKAADEMKAQFAHVDGDHLTLLNTYHAYKQAGESREWCYEHFINSRSMQAAENVRQQLSRIMTRMGLTLVSTDFNSKNYYTNIKKCLVSGMFMQVAHLERTGHYLTVKDNQVVSIHPSSVLDVKPPWVMYEDFVLTTKNYIRTCTSVRGEWLVEIAPHYYDLSNFPQCEAKAELESIYRRMLENL 720
[Close]
BLAST of mRNA_P-wetherbeei_contig710.1.1 vs. uniprot
Match: A0A7S2SQY7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY7_9STRA)

HSP 1 Score: 1023 bits (2646), Expect = 0.000e+0
Identity = 510/679 (75.11%), Postives = 585/679 (86.16%), Query Frame = 1 
Query:    4 VNPWTGKPYSRQYYDILAKRQTLPVHQFLDELTEKVKNNQVVVVEGETGSGKTTQIPQFLVEAGYG--KVGS-KLVACTQPRRVAAMSIAARVADEMDVPLGDVVGYNIRFEACISPRTVLAFLTDGMLLREAMNDPRRVSFPVRYSCIVLDEAHERTLATDVLMGLLKEVMIKRPDLKVVVMSATLDAGKFQTYFDNAPLLKVPGRMFPVETYYTPEPERDYVEAAIRTVVQIHRCEEPGDVLLFLTGEDEIEDACRRIRAETANLGESAGECVVYPLYSTLPPAQQKKIFTEAPGPKTPGGPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRAGRAGRTRPGKCFRLYTEKSFKEELLEQTYPEILRSKMSTVVLTLLKLGITDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTELGSQMSELPLDPQLSKMLLASPDYNCSNEVLTIVAMLSVPQVFMRPKEAAQAADRAKAQFAHMDGDHLTLLNAYHAYQQAGCSKDWCYENFINSRAMGSAESVREQLGRLMKRLNLPLVSTDFSSRDYYTNIKKAIVAGMFMQVAHLERSGHYLTVKDNQVVSLHPSCVLDGKPKWVCFEEFVLTTKNFIRTCTGVQPEWLVEIAPHYFDLENFPECEAKQDLEATYRRM 2031
            VNP T +PYS QY+ ILA R+ LPV+QFLDEL  +VK +Q +VVEGETGSGKTTQIPQFLV+AGY   K G  ++VACTQPRRVAAMSIA RVA+EMDV LG+ VGY IRF+   +  T+L F+TDGMLLREAM DP       RY CIVLDEAHERTL+TDVLMGLLKEV+++R DLK+VVMSATLDA KFQ YFD+APLLKVPGR  PVE +YTPEPERDYVEA++RT VQIH CEEPGDVL+FLTGE EIED C+RIRAE    G   G   VYPLYS+LPPA+Q +IF  AP P+TPGGPPGRK+VVSTNIAETSLTIDG+VYVVDPGFSKQKVYNPRIRVESLLVSPISRASA+QR+GRAGRTRPGKCFRLYTEKSF +EL EQTYPEILRSKMSTVVLTL KLGI DLVHFDFMDPPAPETLMRALELLNYLGALDD+G++T LG+QM+ELP+DPQ ++ML+++P + CSNE+L+IVA+L+VPQ+FMRPKEA +AAD AK QFAH+DGDHLTLLNAYHAY+Q G  + WC++NFINSR + SA+SVR QL R+M+RL LPLVSTDFSSRDYY NI+K +V GMFMQVAHLERSGHYLTVKDNQVVS+HPS VLD KP WV FEEFVLT+KNF+RT T V+ +WLVE APHY+DL NFP CEAK +LEA +R++
Sbjct:   46 VNPLTMRPYSDQYHKILAVRKKLPVYQFLDELLARVKESQSIVVEGETGSGKTTQIPQFLVQAGYAGFKNGKQRMVACTQPRRVAAMSIARRVAEEMDVQLGEQVGYTIRFDDVTNQSTILKFMTDGMLLREAMTDP----LLERYQCIVLDEAHERTLSTDVLMGLLKEVLVQRKDLKLVVMSATLDAVKFQRYFDDAPLLKVPGRCHPVELFYTPEPERDYVEASVRTAVQIHLCEEPGDVLIFLTGEQEIEDVCQRIRAEADTFGPEVGPISVYPLYSSLPPAKQNEIFNPAPEPRTPGGPPGRKIVVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFHQELQEQTYPEILRSKMSTVVLTLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDEGDMTSLGTQMAELPVDPQHARMLISAPSHQCSNEMLSIVALLNVPQIFMRPKEAQKAADEAKGQFAHIDGDHLTLLNAYHAYKQNGDDRQWCWDNFINSRNISSADSVRNQLKRIMERLELPLVSTDFSSRDYYINIRKCLVEGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDQKPPWVLFEEFVLTSKNFVRTVTAVRVDWLVEQAPHYYDLSNFPPCEAKSELEACFRKV 720
[Close]
BLAST of mRNA_P-wetherbeei_contig710.1.1 vs. uniprot
Match: A0A7S3M5R1_9STRA (RNA helicase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5R1_9STRA)

HSP 1 Score: 1011 bits (2614), Expect = 0.000e+0
Identity = 497/678 (73.30%), Postives = 585/678 (86.28%), Query Frame = 1 
Query:    7 NPWTGKPYSRQYYDILAKRQTLPVHQFLDELTEKVKNNQVVVVEGETGSGKTTQIPQFLVEAGYGKVGSKLVACTQPRRVAAMSIAARVADEMDVPLGDVVGYNIRFEACISPRTVLAFLTDGMLLREAMNDPRRVSFPVRYSCIVLDEAHERTLATDVLMGLLKEVMIKRPDLKVVVMSATLDAGKFQTYFDNAPLLKVPGRMFPVETYYTPEPERDYVEAAIRTVVQIHRCEEPGDVLLFLTGEDEIEDACRRIRAETANLGESAGECVVYPLYSTLPPAQQKKIFTEAPGPKTPGGPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRAGRAGRTRPGKCFRLYTEKSFKEELLEQTYPEILRSKMSTVVLTLLKLGITDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTELGSQMSELPLDPQLSKMLLASPDYNCSNEVLTIVAMLSVPQVFMRPKEAAQAADRAKAQFAHMDGDHLTLLNAYHAYQQAGCSKDWCYENFINSRAMGSAESVREQLGRLMKRLNLPLVSTDFSSRDYYTNIKKAIVAGMFMQVAHLERSGHYLTVKDNQVVSLHPSCVLDGKPKWVCFEEFVLTTKNFIRTCTGVQPEWLVEIAPHYFDLENFPECEAKQDLEATYRRMLQQ 2040
            NPWT   YS +YYDIL+KR+ LPV++F  EL +KVK NQV+VVEGETGSGKTTQIPQFL+       G K +ACTQPRRVAAMSIA RVADEMDV +G+ VGY IRFE C +  T+L F+TDGMLLREAM+DP    +  RYSCIV+DEAHERTL+TDVLMGLLK+VM+KRPDLKVV+MSATLDA KFQ YFD APL+KVPGR  PVE +YTPEPERDYVEA++RTVVQIH+ E PGDVLLFLTGE+EIEDACRRIRAE   LG+S G   VYPLY++LPP QQ+ IF +APGP+ PGG PGRKV+VSTNIAETSLTIDG+V+VVDPGFSKQKV+NPRIRVESLLVSPIS+ASA+QR+GRAGRTRPGKCFRLYTE+SF +EL  QTYPEILRS+M TVVLTLLKLGI DLVHFDFMDPPAPET+MRALE LNYLGALDD+G +T LG  MSE+PL+PQ +KMLL SPDY CSNEVL+IVA+LSVP +FMRPKEAA+AAD AKAQFAH+DGDHLT+LNAYHA+ Q G SKDWC++NFIN R++ S ++VR+QL R+MK+L LPLVSTDFSS DYYTNI++ + AG+FMQVAHL++ GHYLTVKD+QVV++HPS VLD KP WV F+EFVLTT+N++RT + V+ EWLVE++PHY+DLEN+PE E K ++E  YRR+ Q+
Sbjct:   36 NPWTRATYSSKYYDILSKRKQLPVYEFKAELEQKVKANQVIVVEGETGSGKTTQIPQFLLPM-LAVPGQKCIACTQPRRVAAMSIAKRVADEMDVVMGEQVGYTIRFEDCTNQNTILKFMTDGMLLREAMHDP----YMHRYSCIVIDEAHERTLSTDVLMGLLKDVMLKRPDLKVVIMSATLDAEKFQKYFDGAPLMKVPGRTHPVEVFYTPEPERDYVEASVRTVVQIHQYESPGDVLLFLTGEEEIEDACRRIRAEADALGDSVGPMEVYPLYASLPPRQQQDIFKDAPGPRKPGGTPGRKVIVSTNIAETSLTIDGIVFVVDPGFSKQKVFNPRIRVESLLVSPISQASAQQRSGRAGRTRPGKCFRLYTERSFTDELQVQTYPEILRSRMETVVLTLLKLGIEDLVHFDFMDPPAPETMMRALEQLNYLGALDDEGAMTPLGHMMSEMPLEPQQAKMLLISPDYQCSNEVLSIVALLSVPNIFMRPKEAAKAADEAKAQFAHVDGDHLTMLNAYHAFMQNGESKDWCWDNFINHRSIVSVKNVRDQLQRIMKKLELPLVSTDFSSADYYTNIRRCLAAGLFMQVAHLQKQGHYLTVKDHQVVTIHPSSVLDTKPPWVLFQEFVLTTRNYVRTVSVVRLEWLVELSPHYYDLENWPEGETKLEIERAYRRIQQE 708
[Close]
BLAST of mRNA_P-wetherbeei_contig710.1.1 vs. uniprot
Match: A0A7S3ZQN2_9STRA (RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQN2_9STRA)

HSP 1 Score: 997 bits (2577), Expect = 0.000e+0
Identity = 499/678 (73.60%), Postives = 568/678 (83.78%), Query Frame = 1 
Query:    1 GVNPWTGKPYSRQYYDILAKRQTLPVHQFLDELTEKVKNNQVVVVEGETGSGKTTQIPQFLVEAGYGKVGSKLVACTQPRRVAAMSIAARVADEMDVPLGDVVGYNIRFEACISPRTVLAFLTDGMLLREAMNDPRRVSFPVRYSCIVLDEAHERTLATDVLMGLLKEVMIKRPDLKVVVMSATLDAGKFQTYFDNAPLLKVPGRMFPVETYYTPEPERDYVEAAIRTVVQIHRCEEPGDVLLFLTGEDEIEDACRRIRAETANLGESAGECVVYPLYSTLPPAQQKKIFTEAPGPKTPGGPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRAGRAGRTRPGKCFRLYTEKSFKEELLEQTYPEILRSKMSTVVLTLLKLGITDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTELGSQMSELPLDPQLSKMLLASPDYNCSNEVLTIVAMLSVPQVFMRPKEAAQAADRAKAQFAHMDGDHLTLLNAYHAYQQAGCSKDWCYENFINSRAMGSAESVREQLGRLMKRLNLPLVSTDFSSRDYYTNIKKAIVAGMFMQVAHLERSGHYLTVKDNQVVSLHPSCVLDGKPKWVCFEEFVLTTKNFIRTCTGVQPEWLVEIAPHYFDLENFPECEAKQDLEATYRRML 2034
            G NP+ GKPYSR+Y+DIL  R+ LPV+ FL+ L + VKNNQ VVVEGETGSGKTTQIPQFLV+  Y + GSK VACTQPRRVAAMSIA RVADEMDV LG+ VGY+IRFE    P T+L F+TDGMLLREAM+DP    F  R S IVLDEAHERTL+TDVLMGLLKE++ +R DLK VVMSATLDA KFQTYF+ APLL+VPGR FPVE +YTPEPERDYVEAA+RT  QIH CE  GD+L+FLTGE EIED C+R+R E    G   GE VVYPLYS+LPP QQK+IF +APGP+  GG PGRKVVVSTNIAETSLTIDG+VYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRAGRAGRTRPGKCFRLYTE SFK EL EQTYPEILRSKMS VVLTL KLGI DLVHFDFMDPPAPETLMRALELLNYLGALDDDG LT+LG QM+ELPLDPQL+K+LLASP+Y CSNE L++VA +SVPQ+F RP++  + AD AK QFAH DGDH TLLNAYHAY+       WC ENF++SR++ SA+SVR+QL R+M+RLN+PLVST F   DYY N++K I+AG F+QVAHLER G YLTVKDNQVV+LHPS VLD KP WVC+EEFVLT++NF+RTCT V+  WL EIAPHY+DL+NFP+ EAK  LE  YR+++
Sbjct:   38 GCNPFNGKPYSRRYHDILRGRKELPVYGFLERLLDAVKNNQTVVVEGETGSGKTTQIPQFLVK-DYARRGSKCVACTQPRRVAAMSIAQRVADEMDVQLGEEVGYSIRFEDTTGPNTLLKFMTDGMLLREAMSDP----FLERMSVIVLDEAHERTLSTDVLMGLLKELLQQRKDLKCVVMSATLDAEKFQTYFEGAPLLRVPGRTFPVEIFYTPEPERDYVEAAVRTAAQIHACESAGDILVFLTGEIEIEDVCQRLRNEAQKCGPERGELVVYPLYSSLPPRQQKRIFDKAPGPRVAGGMPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRAGRAGRTRPGKCFRLYTEASFKSELQEQTYPEILRSKMSNVVLTLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDDGALTDLGRQMAELPLDPQLAKLLLASPEYKCSNEALSVVACMSVPQIFQRPRQKQREADDAKNQFAHRDGDHPTLLNAYHAYKHHHSDPAWCSENFLSSRSLASADSVRQQLQRIMERLNIPLVSTPFDDPDYYVNLRKCILAGNFLQVAHLERGGSYLTVKDNQVVALHPSTVLDSKPPWVCYEEFVLTSRNFVRTCTAVECRWLCEIAPHYYDLQNFPKGEAKVALERCYRQIM 710
[Close]
BLAST of mRNA_P-wetherbeei_contig710.1.1 vs. uniprot
Match: A0A7S2HR77_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HR77_9STRA)

HSP 1 Score: 989 bits (2556), Expect = 0.000e+0
Identity = 498/670 (74.33%), Postives = 570/670 (85.07%), Query Frame = 1 
Query:   49 ILAKRQTLPVHQFLDELTEKVKNNQVVVVEGETGSGKTTQIPQFLVEAGYGKVGS---KLVACTQPRRVAAMSIAARVADEMDVPLGDVVGYNIRFEACISPRTVLAFLTDGMLLREAMNDPRRVSFPVRYSCIVLDEAHERTLATDVLMGLLKEVMIKRPDLKVVVMSATLDAGKFQTYFDNAPLLKVPGRMFPVETYYTPEPERDYVEAAIRTVVQIHRCEEPGDVLLFLTGEDEIEDACRRIRAETANLGESAGECVVYPLYSTLPPAQQKKIFTEAPGPKTPGGPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRAGRAGRTRPGKCFRLYTEKSFKEELLEQTYPEILRSKMSTVVLTLLKLGITDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTELGSQMSELPLDPQLSKMLLASPDYNCSNEVLTIVAMLSVPQVFMRPKEAAQAADRAKAQFAHMDGDHLTLLNAYHAYQQAGCSKDWCYENFINSRAMGSAESVREQLGRLMKRLNLPLVSTDFSSRDYYTNIKKAIVAGMFMQVAHLERSGHYLTVKDNQVVSLHPSCVL-DGKPKWVCFEEFVLTTKNFIRTCTGVQPEWLVEIAPHYFDLENFPECEAKQDLEATYRRMLQQLS 2046
            +LA R+ LPV+QFL+EL  +V+ NQ VVVEGETGSGKTTQIPQFLV AGY  V +   ++VACTQPRRVAAMSIA RVA+EMDV LG  VGY IRFE   SP+TVL F+TDGMLLREAM DP       RY  IVLDEAHERTLATDVLMGLLK V+++R DLK+VVMSATLDA KFQTYF ++PLL+VPGR  PVE +YTPE ERDYVEAA+RT VQIH CEEPGDVL+FLTGE+EIED CR++R E  + G   G   VYPLYS+LPPA+Q +IF  AP P TPGGPPGRKVVVSTNIAETSLTIDG+VYVVDPGFSKQKVYNPRIRVESLLVSPIS+ASA+QR+GRAGRTRPGKCFRLYTEKSF++EL EQTYPEILRSKMS VVLTL KLGI DLVHFDFMDPPAPETLMRALELLNYLGALDDDG LT LG +M+ELP+DPQ ++ML +SP+Y CSNE+++IVA+L+VPQ+FMRPKEA +AAD AK+ FAH+DGD LTLLNAYHAY+Q G  K WCY+NFINSR+M SA+SVR+QL R+M RL LPLVSTDFSSR+YY NI+K +V+GMFMQVAH ER+ HYLTVKDNQVVS+HPS V+ D KP WV FEEFVLT+KNF+RT T V  +WLVEIAPHY++L NFP+CEAK +LE  YRR+  Q S
Sbjct:    1 LLATRKKLPVYQFLNELLSRVEKNQGVVVEGETGSGKTTQIPQFLVSAGYATVRNGKQRMVACTQPRRVAAMSIAKRVAEEMDVTLGQQVGYTIRFEDITSPQTVLKFMTDGMLLREAMTDP----LLERYQAIVLDEAHERTLATDVLMGLLKAVLLQRKDLKLVVMSATLDAQKFQTYFSDSPLLRVPGRCHPVEVFYTPEAERDYVEAAVRTTVQIHLCEEPGDVLVFLTGEEEIEDVCRKLRTEQESFGPEVGPLEVYPLYSSLPPAKQSEIFNPAPSPVTPGGPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISQASAQQRSGRAGRTRPGKCFRLYTEKSFEQELQEQTYPEILRSKMSNVVLTLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDDGELTPLGEKMAELPVDPQHARMLTSSPEYRCSNEMVSIVALLNVPQIFMRPKEAQKAADEAKSTFAHIDGDQLTLLNAYHAYKQNGDDKKWCYDNFINSRSMASADSVRKQLERIMTRLQLPLVSTDFSSREYYPNIRKCLVSGMFMQVAHRERTNHYLTVKDNQVVSIHPSSVIGDQKPPWVLFEEFVLTSKNFVRTVTAVDVKWLVEIAPHYYELNNFPKCEAKVELEHEYRRIANQRS 666
[Close]
BLAST of mRNA_P-wetherbeei_contig710.1.1 vs. uniprot
Match: A0A0D3DV24_BRAOL (RNA helicase n=9 Tax=Brassica TaxID=3705 RepID=A0A0D3DV24_BRAOL)

HSP 1 Score: 969 bits (2506), Expect = 0.000e+0
Identity = 476/678 (70.21%), Postives = 561/678 (82.74%), Query Frame = 1 
Query:    1 GVNPWTGKPYSRQYYDILAKRQTLPVHQFLDELTEKVKNNQVVVVEGETGSGKTTQIPQFLVEAGYGKVGSK--LVACTQPRRVAAMSIAARVADEMDVPLGDVVGYNIRFEACISPRTVLAFLTDGMLLREAMNDPRRVSFPVRYSCIVLDEAHERTLATDVLMGLLKEVMIKRPDLKVVVMSATLDAGKFQTYFDNAPLLKVPGRMFPVETYYTPEPERDYVEAAIRTVVQIHRCEEPGDVLLFLTGEDEIEDACRRIRAETANLGESAGECVVYPLYSTLPPAQQKKIFTEAPGPKTPGGPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRAGRAGRTRPGKCFRLYTEKSFKEELLEQTYPEILRSKMSTVVLTLLKLGITDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTELGSQMSELPLDPQLSKMLLASPDYNCSNEVLTIVAMLSVPQVFMRPKEAAQAADRAKAQFAHMDGDHLTLLNAYHAYQQAGCSKDWCYENFINSRAMGSAESVREQLGRLMKRLNLPLVSTDFSSRDYYTNIKKAIVAGMFMQVAHLERSGHYLTVKDNQVVSLHPSCVLDGKPKWVCFEEFVLTTKNFIRTCTGVQPEWLVEIAPHYFDLENFPECEAKQDLEATYRR 2028
            G+N W GKPYS +YY+IL KR+TLPV    +E    +KNNQ +++ GETGSGKTTQIPQF+++A   +   +  LVACTQPRRVAAMS++ RVADEMDV +G+ VGY+IRFE C SPRTVL +LTDGMLLREAM DP       RY  I+LDEAHERTLATDVL GLLKEV+  RPDLK+VVMSATL+A KFQ YF  APL+KVPGR+ PVE +YT EPERDY+EAAIRTVVQIH CE PGD+L+FLTGE+EIEDACR+I  E  NLG+  G   V PLYSTLPPA Q+KIF  AP P T GGPPGRK+VVSTNIAETSLTIDG+VYV+DPGF+KQKVYNPRIRVESLLVSPIS+ASA QR+GRAGRTRPGKCFRLYTEKSF  +L  QTYPEILRS ++  VLTL KLGI DLVHFDFMDPPAPETLMRALE+LNYLGALDD+GNLT  G  MSE PLDPQ++KML+ SP++NCSNE+L++ AMLSVP  F+RP+E  +AAD AKA+FAH+DGDHLTLLN YHA++Q     +WCYEN+IN+RAM SA++VR+QL R+M R NL + STDF+SRDYY NI+KA++AG FMQVAHLER+G YLTVKDNQVV LHPS  LD KP+WV + E+VLTT+NFIRT T ++ EWLV++APHY+DL NFP CEAK+ LE  Y++
Sbjct:   33 GINKWNGKPYSAKYYEILEKRRTLPVWLQKEEFLSTLKNNQTIILVGETGSGKTTQIPQFVIDAVDAESSDRKWLVACTQPRRVAAMSVSRRVADEMDVAIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADP----LLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPEPVTKGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTRTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFLRPREYQKAADEAKAKFAHIDGDHLTLLNVYHAFKQNNEDPNWCYENYINNRAMKSADNVRQQLVRIMSRFNLKICSTDFNSRDYYINIRKAMLAGYFMQVAHLERAGSYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAPHYYDLTNFPNCEAKRVLEKLYKK 706
[Close]
BLAST of mRNA_P-wetherbeei_contig710.1.1 vs. uniprot
Match: W9QW63_9ROSA (RNA helicase n=4 Tax=Rosales TaxID=3744 RepID=W9QW63_9ROSA)

HSP 1 Score: 969 bits (2505), Expect = 0.000e+0
Identity = 478/679 (70.40%), Postives = 563/679 (82.92%), Query Frame = 1 
Query:    4 VNPWTGKPYSRQYYDILAKRQTLPVHQFLDELTEKVKNNQVVVVEGETGSGKTTQIPQFLVEAGYGKVGSK----LVACTQPRRVAAMSIAARVADEMDVPLGDVVGYNIRFEACISPRTVLAFLTDGMLLREAMNDPRRVSFPVRYSCIVLDEAHERTLATDVLMGLLKEVMIKRPDLKVVVMSATLDAGKFQTYFDNAPLLKVPGRMFPVETYYTPEPERDYVEAAIRTVVQIHRCEEPGDVLLFLTGEDEIEDACRRIRAETANLGESAGECVVYPLYSTLPPAQQKKIFTEAPGPKTPGGPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRAGRAGRTRPGKCFRLYTEKSFKEELLEQTYPEILRSKMSTVVLTLLKLGITDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTELGSQMSELPLDPQLSKMLLASPDYNCSNEVLTIVAMLSVPQVFMRPKEAAQAADRAKAQFAHMDGDHLTLLNAYHAYQQAGCSKDWCYENFINSRAMGSAESVREQLGRLMKRLNLPLVSTDFSSRDYYTNIKKAIVAGMFMQVAHLERSGHYLTVKDNQVVSLHPSCVLDGKPKWVCFEEFVLTTKNFIRTCTGVQPEWLVEIAPHYFDLENFPECEAKQDLEATYRR 2028
            VN WTGKPYS++Y++IL KR+TLPV Q  DE  + ++NNQ +++ GETGSGKTTQIPQF++EA   +   K    +VACTQPRRVAAMS++ RVA+EMDV +G+ VGY+IRFE C S RTVL +LTDGMLLREAM DP       RY  I+LDEAHERTLATDVL GLLKEV+  RPDLK+VVMSATL+A KFQ YF  APL+KVPGR+ PVE +YT EPERDY+EAAIRTVVQIH CE  GD+L+FLTGE+EIEDACR+I  E  NLG+  G     PLYSTLPPA Q+KIF  AP P   GGPPGRK+VVSTNIAETSLTIDG+VYV+DPGF+KQKVYNPR+RVESLLVSPIS+ASA QR+GRAGRT+PGKCFRLYTE+SF  +L  QTYPEILRS ++  VLTL KLGI DLVHFDFMDPPAPETLMRALE+LNYLGALDDDGNLT+LG  MSE PLDPQ+SKML+ SP++NCSNE+L+I AMLSVP  F+RP+EA +AAD AKA+F H+DGDHLTLLN YHAY+Q      WCYENF+N RA+ SA++VR+QL R+M R NL L STDF+SRDYY NI+KA++AG FMQVAHLER+GHYLTVKDNQVV LHPS  LD KP+WV + E+VLT++NFIRT T ++ EWLV+IAPHYFDLENFP+CEAK+ LE  Y++
Sbjct:  236 VNTWTGKPYSQRYFEILEKRKTLPVWQQKDEFMQVLRNNQTLILVGETGSGKTTQIPQFVLEAVEAEYPDKRRKWMVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDP----LLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPQGDILVFLTGEEEIEDACRKISKEIGNLGDQVGPVKAVPLYSTLPPAMQQKIFDPAPPPVNEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFSNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFVNHRALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYFDLENFPQCEAKRVLERLYKK 910
[Close]
BLAST of mRNA_P-wetherbeei_contig710.1.1 vs. uniprot
Match: A0A6J0P4R9_RAPSA (RNA helicase n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0P4R9_RAPSA)

HSP 1 Score: 969 bits (2504), Expect = 0.000e+0
Identity = 475/680 (69.85%), Postives = 561/680 (82.50%), Query Frame = 1 
Query:    1 GVNPWTGKPYSRQYYDILAKRQTLPVHQFLDELTEKVKNNQVVVVEGETGSGKTTQIPQFLVEAGYGKVGSK----LVACTQPRRVAAMSIAARVADEMDVPLGDVVGYNIRFEACISPRTVLAFLTDGMLLREAMNDPRRVSFPVRYSCIVLDEAHERTLATDVLMGLLKEVMIKRPDLKVVVMSATLDAGKFQTYFDNAPLLKVPGRMFPVETYYTPEPERDYVEAAIRTVVQIHRCEEPGDVLLFLTGEDEIEDACRRIRAETANLGESAGECVVYPLYSTLPPAQQKKIFTEAPGPKTPGGPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAKQRAGRAGRTRPGKCFRLYTEKSFKEELLEQTYPEILRSKMSTVVLTLLKLGITDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTELGSQMSELPLDPQLSKMLLASPDYNCSNEVLTIVAMLSVPQVFMRPKEAAQAADRAKAQFAHMDGDHLTLLNAYHAYQQAGCSKDWCYENFINSRAMGSAESVREQLGRLMKRLNLPLVSTDFSSRDYYTNIKKAIVAGMFMQVAHLERSGHYLTVKDNQVVSLHPSCVLDGKPKWVCFEEFVLTTKNFIRTCTGVQPEWLVEIAPHYFDLENFPECEAKQDLEATYRR 2028
            G+N W GKPYS +YY+IL KR+TLPV    +E  + +K+NQ +++ GETGSGKTTQIPQF+++A   +   K    LV CTQPRRVAAMS++ RVADEMDV +G+ VGY+IRFE C SPRTVL +LTDGMLLREAM DP       RY  I+LDEAHERTLATDVL GLLKEV+  RPDLK+VVMSATL+A KFQ YF  APL+KVPGR+ PVE +YT EPERDY+EAAIRTVVQIH CE PGD+L+FLTGE+EIEDACR+I  E  NLG+  G   V PLYSTLPPA Q+KIF  AP P T GGPPGRK+VVSTNIAETSLTIDG+VYV+DPGF+KQKVYNPRIRVESLLVSPIS+ASA QR+GRAGRTRPGKCFRLYTEKSF  +L  QTYPEILRS ++  VLTL KLGI DLVHFDFMDPPAPETLMRALE+LNYLGALDDDGNLT  G  MSE PLDPQ++KML+ SP++NCSNE+L++ AMLSVP  F+RP+E  + AD AKA+F H+DGDHLTLLN YHA++Q     +WCYEN+IN+RAM SA++VR+QL R+M R NL + STDF+SRDYYTNI+KA+++G FMQVAHLER+GHYLTVKDNQVV LHPS  LD KP+WV + E+VLTT+NFIRT T ++ EWLV++APHY+DL NFP CEAK+ LE  Y++
Sbjct:   34 GINKWNGKPYSAKYYEILEKRRTLPVWLQKEEFLKTLKDNQTLILVGETGSGKTTQIPQFVIDAVDAEFSHKHKKWLVGCTQPRRVAAMSVSRRVADEMDVAIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADP----LLERYKVIILDEAHERTLATDVLFGLLKEVLGNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGINDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTRTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFLRPRETQKQADEAKARFGHIDGDHLTLLNVYHAFKQHNEDPNWCYENYINTRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYTNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAPHYYDLINFPNCEAKRVLEKLYKK 709
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig710.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBU4_9STRA0.000e+081.89RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
D7G1I0_ECTSI0.000e+081.71RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A7S2UZ15_9STRA0.000e+076.76RNA helicase n=1 Tax=Fibrocapsa japonica TaxID=946... [more]
A0A7S2SQY7_9STRA0.000e+075.11Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3M5R1_9STRA0.000e+073.30RNA helicase n=1 Tax=Spumella elongata TaxID=89044... [more]
A0A7S3ZQN2_9STRA0.000e+073.60RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=... [more]
A0A7S2HR77_9STRA0.000e+074.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0D3DV24_BRAOL0.000e+070.21RNA helicase n=9 Tax=Brassica TaxID=3705 RepID=A0A... [more]
W9QW63_9ROSA0.000e+070.40RNA helicase n=4 Tax=Rosales TaxID=3744 RepID=W9QW... [more]
A0A6J0P4R9_RAPSA0.000e+069.85RNA helicase n=1 Tax=Raphanus sativus TaxID=3726 R... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig710contigP-wetherbeei_contig710:956..7639 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G1I0
Preferred nameDHX15
PFAMsAAA_22,DEAD,HA2,Helicase_C,OB_NTP_bind
Model size2049
Max annot lvl2759|Eukaryota
KEGG koko:K04615,ko:K12820,ko:K14305
KEGG TC1.l.1,9.A.14.15.1
KEGG Pathwayko03013,ko03040,ko04024,ko04080,ko04727,ko04742,ko04915,ko05032,map03013,map03040,map04024,map04080,map04727,map04742,map04915,map05032
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000375,GO:0000377,GO:0000390,GO:0000398,GO:0000460,GO:0000462,GO:0000463,GO:0000466,GO:0000470,GO:0001932,GO:0001934,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005689,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009507,GO:0009526,GO:0009536,GO:0009893,GO:0009941,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019220,GO:0019222,GO:0022411,GO:0022613,GO:0023051,GO:0023056,GO:0030490,GO:0030554,GO:0030684,GO:0030686,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032270,GO:0032553,GO:0032555,GO:0032559,GO:0032872,GO:0032874,GO:0032984,GO:0032988,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042254,GO:0042273,GO:0042274,GO:0042325,GO:0042327,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043408,GO:0043410,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045937,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0070013,GO:0070035,GO:0070302,GO:0070304,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1900744,GO:1900745,GO:1901265,GO:1901360,GO:1901363,GO:1902531,GO:1902533,GO:1990904
Exons13
Evalue0.0
EggNOG OGsCOG1643@1|root,KOG0925@2759|Eukaryota
Ec32 ortholog descriptionRNA helicase family protein
Ec32 orthologEc-07_001080.1
EC3.6.4.13
Descriptionhelicase activity
Cds size2049
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03019,ko03036,ko03041,ko04030
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig710.1.1prot_P-wetherbeei_contig710.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig710 956..7639 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186958.4064796-CDS-P-wetherbeei_contig710:955..12341683186958.4064796-CDS-P-wetherbeei_contig710:955..1234Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 956..1234 -
1683186958.4175007-CDS-P-wetherbeei_contig710:1650..17981683186958.4175007-CDS-P-wetherbeei_contig710:1650..1798Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 1651..1798 -
1683186958.4446325-CDS-P-wetherbeei_contig710:2122..22801683186958.4446325-CDS-P-wetherbeei_contig710:2122..2280Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 2123..2280 -
1683186958.45833-CDS-P-wetherbeei_contig710:2557..26941683186958.45833-CDS-P-wetherbeei_contig710:2557..2694Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 2558..2694 -
1683186958.4690473-CDS-P-wetherbeei_contig710:3059..32251683186958.4690473-CDS-P-wetherbeei_contig710:3059..3225Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 3060..3225 -
1683186958.4795449-CDS-P-wetherbeei_contig710:3529..36851683186958.4795449-CDS-P-wetherbeei_contig710:3529..3685Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 3530..3685 -
1683186958.4899716-CDS-P-wetherbeei_contig710:4653..49571683186958.4899716-CDS-P-wetherbeei_contig710:4653..4957Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 4654..4957 -
1683186958.5003002-CDS-P-wetherbeei_contig710:5256..54261683186958.5003002-CDS-P-wetherbeei_contig710:5256..5426Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 5257..5426 -
1683186958.5105503-CDS-P-wetherbeei_contig710:5776..58781683186958.5105503-CDS-P-wetherbeei_contig710:5776..5878Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 5777..5878 -
1683186958.520406-CDS-P-wetherbeei_contig710:6250..63851683186958.520406-CDS-P-wetherbeei_contig710:6250..6385Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 6251..6385 -
1683186958.530484-CDS-P-wetherbeei_contig710:6785..68751683186958.530484-CDS-P-wetherbeei_contig710:6785..6875Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 6786..6875 -
1683186958.5408778-CDS-P-wetherbeei_contig710:7237..73181683186958.5408778-CDS-P-wetherbeei_contig710:7237..7318Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 7238..7318 -
1683186958.5511253-CDS-P-wetherbeei_contig710:7516..76391683186958.5511253-CDS-P-wetherbeei_contig710:7516..7639Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig710 7517..7639 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig710.1.1

>prot_P-wetherbeei_contig710.1.1 ID=prot_P-wetherbeei_contig710.1.1|Name=mRNA_P-wetherbeei_contig710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=683bp
GVNPWTGKPYSRQYYDILAKRQTLPVHQFLDELTEKVKNNQVVVVEGETG
SGKTTQIPQFLVEAGYGKVGSKLVACTQPRRVAAMSIAARVADEMDVPLG
DVVGYNIRFEACISPRTVLAFLTDGMLLREAMNDPRRVSFPVRYSCIVLD
EAHERTLATDVLMGLLKEVMIKRPDLKVVVMSATLDAGKFQTYFDNAPLL
KVPGRMFPVETYYTPEPERDYVEAAIRTVVQIHRCEEPGDVLLFLTGEDE
IEDACRRIRAETANLGESAGECVVYPLYSTLPPAQQKKIFTEAPGPKTPG
GPPGRKVVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSP
ISRASAKQRAGRAGRTRPGKCFRLYTEKSFKEELLEQTYPEILRSKMSTV
VLTLLKLGITDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTELGS
QMSELPLDPQLSKMLLASPDYNCSNEVLTIVAMLSVPQVFMRPKEAAQAA
DRAKAQFAHMDGDHLTLLNAYHAYQQAGCSKDWCYENFINSRAMGSAESV
REQLGRLMKRLNLPLVSTDFSSRDYYTNIKKAIVAGMFMQVAHLERSGHY
LTVKDNQVVSLHPSCVLDGKPKWVCFEEFVLTTKNFIRTCTGVQPEWLVE
IAPHYFDLENFPECEAKQDLEATYRRMLQQLS*
back to top

mRNA from alignment at P-wetherbeei_contig710:956..7639-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig710.1.1 ID=mRNA_P-wetherbeei_contig710.1.1|Name=mRNA_P-wetherbeei_contig710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=6684bp|location=Sequence derived from alignment at P-wetherbeei_contig710:956..7639- (Phaeothamnion wetherbeei SAG_119_79)
GGAGTGAACCCCTGGACGGGAAAGCCATACTCGCGGCAGTACTACGACAT
CCTGGCGAAGCGCCAGACGCTGCCGGTGCATCAGTTTCTCGACGAACTGA
CGGAGAAAGTGAAGAACAACCAGGTCAGTGCAAGCGGAGTTTGCACTTTT
CCGCGGTTGGCAATGTCGTCTCCACCCTCCATGTGCGAGGCGTTTCCTTT
GAATTCCTCCTGCTCTCTCGATACCAGCTCTGTGTTGAGGAGTTTAACTG
TGATAGCCTCTTGTTGCGGCCTTTTCGTCCGTTTCACCTCCGACGTGTAC
TTGTGGTCATTTTTGCCGTAGGTGGTAGTGGTAGAGGGCGAGACCGGCAG
CGGAAAAACCACGCAGATCCCGCAGTTCCTGGTGGAGGCGGGCTACGGCA
AGGTGAGACAATGCGCTTGCGGCAAATGGGCTTGGCAACTATGCTTACAT
GGCGATCTTTTCTCTTGCTTTTCATTTCCAACCGGCCTTGTTTTCTTCGA
GGTGACGCAAGTGGTTTTCAAAGGGCCTCAGCTGATCATCATCCTGAAGT
TCATGGTTGAGACCTTTCATTTTTCCTTAACATTTGAACTCCCTTCCATT
GTTCCTCGTCGCCTTGTTGCCGGCAACCCTGTCTACTTTCTCTGGCCGTG
TGAATCCACGCTGACGTGTGCTGCTTGCTGTTTTCGCTTTGCGCAATTCG
TGTGCTTCTCCGAGAACTAAAAAGAAAACTCGTCGCGGTGCGCTCTTTTC
TCCAACCTTGACAGGTTGGCTCCAAGTTAGTGGCATGTACACAGCCGAGA
AGGGTGGCGGCAATGAGCATCGCGGCGCGCGTCGCCGACGAGATGGACGT
GCCGGTAAGCGAATAAGAAGGAGCTTGTGTTCGATTCAACCAAGCCGGGA
AACTATCAAGAATATTCTCGTGACGGGATGTCTGCCGTGAGTATTTGTTT
TCTTCTTCTCTCCGGGAAGCGACCTGATCTCTTAGCTAATTGGCTTCATT
ATGGAACCACCGCTGCGAGCGCTTGTCGCTTCGTCTGCAGCTTGCCGTTG
CCTTTCTTTCCTTTCGTTTCATACTTGTGATTGTAATAGCGTTGCTCTTG
TCGTCTTGCCTTTGGTGTCATATGTTCCTTCCAGAGGCGTTTCCCTATGT
CAACTGGCGTGTAACCGCGTGCCCTGTGTTCTTTTTTGGTCTTTGAAACC
GGAATATCTGTCCGTTTCGTCTCTTTTCGCTCCGTGTCTCTGTCCTGTGA
GCAGCTCGGAGACGTTGTCGGCTACAACATCCGTTTCGAGGCGTGTATCA
GTCCGCGCACTGTCCTTGCCTTCCTCACGGACGGAATGCTCCTGCGGGAA
GCCATGAACGACCCAAGGCGCGTTTCCTTCCCCGTTCGAGTTTTGTTGGC
ACGTGGGATGTTGGTGAATGCGTGTTTGTTTGACGTTTTGTCATTACTGT
GCGAACCTCTGAGGTGTCGAAATGATGCGCCGGAGCATTGTCGTTCCAGC
CTTTCTGTCCTGCCGCCAGCTGCCTGCAGTGCTGTCGGCCTTTCGCTTCT
TCCCGTTCCTCATGTTACTGTTTCCTCAAACATTTTTTTGGTGCCGCTTT
TAACCTCCGCCCGCTCCCCGCGACTGGTTGGAGGATGGCTTTGGCTTCGG
TGGGGTGTGACTGGCTTTGGCTTCGGTGGGGTGTGACTGATTGGGTAACT
GGTTTCCTGCGACCGGCGCGCATGTCACGGCCGTGCGGCCTGCATTTGCA
GGCTGGACAAGTATTCGTGCATCGTGCTCGACGAAGCGCACGAGCGGACG
CTGGCGACAGACGTTCTGATGGGGCTCCTGAAGGAAGTCATGATCAAGCG
CCCCGACTTGAAGGTCAGTCAGTTGGGGCAATTCGACAAACGGGCCGTCA
CTTGTTAAAGCTTGCTGACCGTTCCCTTTTATCGTGGAGGAGAGGTCGGC
GAAGAACATCTGCGGCTGTTCTGGCGTTCGGCCACCGTAAGAGCGACCGG
AAAGAGCGACCGGAACGGTGGAGGTTGCAATTAATCCCTCTTAAATCATC
CATTTCCTCCTGTGCAGGCGTCAAATTCAGTGGCACGCTTATTTTTGCGC
TTGTTTGCCTGCTTTGGTCTTTTCTAATGGCACTTTTCTTTCGTTGTCTT
CTGCGCCGGTTCACCTGCCTGCCAACTTGCCTACTTGCCTACCTGCCGGC
TTACTCCTTGCAGGTGGTAGTGATGTCGGCGACGCTAGACGCGGGCAAGT
TCCAGACGTACTTCGACAACGCGCCGCTGCTCAAAGTGCCGGGCCGCATG
TTCCCCGTTGAGACGTACTACACGCCTGAGCCCGAGCGGGACTACGTCGA
AGCTGCCATCCGCACCGTCGTGCAGATTCACAGGTTGATTGCAGCTGATT
CATATCTCTTCACGGCAAACAGCTCTTTGTTTCTAAAGATCCATCGCAAA
GTCAATTCTTGTCACTCGGCAATCCCCCTTCCTCCTTCTATATGTCTTTG
TACGTCTCTTGCTGCATTTTGGTGATAGTTGCATTGCTTTCTCCGCCCGC
CGGTGCCCACGGATGTCACCGCTCTGCGCCGCCGCTTCTCGCGCCATTCT
GCCTCTGCACCGCGCCGCTCTGCTTCCTTCCCGTATTGTTTCGGTTCCTC
GCTACTTCTTCCGCCACAATCGCGACCTCCAGGTGCGAGGAGCCGGGGGA
CGTGCTGCTCTTCCTGACGGGCGAAGACGAGATCGAGGACGCCTGCCGCC
GCATCCGCGCCGAGACGGCCAACCTCGGCGAGTCGGCTGGCGAGTGCGTC
GTCTACCCGCTCTACTCGACGCTGCCGCCGGCGCAGCAGAAGAAGATCTT
CACCGAGGCGCCGGGCCCCAAGACGCCGGGTGGGCCGCCGGGGCGCAAGG
TGGTGGTGAGTACTAACATCGCCGAGACGTCGCTAACCATCGACGGCGTC
GTCTACGTCGTCGACCCCGGCTTCTCTAAGCAAAAGGTAGGTAAGGGGTT
TCAATGTGAGACGGTGGGATCGTGGCGGTGGGAATCGTGGCGGCGTTTGT
GGTTAGGCCGGGTGGCTGGAGCGGGCGGTGTGTCGGTAGGAACTGGAGGT
GTGACAATGGGAACGGGCAGTAGCGACGGCGTGACGGTGGGAGCGGGCAG
TAAGGGCGTAGGCCTTGCGATCGCTGCGGTCACGGTGGTGACAGGGGCGG
CAGTGGTGGCGTAGTGGCTTCGATGGCGGCGGCGGCATAGCTACGATGGC
GGTGGCATGATGGTGGCATGGGATGGTGGCGGCGGCAGCGGCGGCAGCGG
CTACGGCGGCATCAGGGCGGCGGTGGTGGACGCGGCGTGGTAGTGGCCGC
AGTGATGCCACCGGAGGCATGGTAGCAGCGGTGGTGTGCGGGCCTCATGG
CGGCTCCGATGGTGGGGGCGGCGGCGACAGCATGATGTCTGCGACGACGT
GGTGTTTGCAGCGGTGACTGCAGCGGTATGGCGGCGGAGCAACGTGGACA
GCGTGTGCCAGAGAGCGGAGGCATCATGGTGGCGGTGACGGCTGCAGCGA
CGGCTGCGGCGGCGGCGGTGGCCGTAGCACCCAGCGGCGGCACACGGCGG
CAATATGGCCGTAGCAGCGGTGGCGGCAGTGGCGGCGACGCGGCGGAGAC
AGTCTTTGGGCTCAGGCTGGGGCTGGGTCTGGCGGTGACCGTAGCATCAG
CACACTTGAAGGGGGCGTGCGCGGAGAGGCTGGTCTTGGCTGGAAGCTTT
TCGAGAGCTGCTGGGATGGGATTACTTTAGTCTTTTGAAGAACATGACTG
CTCTTCGCCGCGAGAGTTAACCTTTTCGGCCTCTGCAATGCAGCAGCCGA
TGCAAGGAGTTTACCCGGGATGCGATGCGAATGCTTGCCTTTCCTGACGT
GTGCTCTTCGACGGCCGGGTCCACCTTTCTGCCCTCTTTCTTTCTCTCTC
ACAGGTGTACAACCCGCGGATCCGCGTGGAGTCGCTGCTGGTGTCGCCCA
TCTCGCGCGCCTCGGCGAAGCAGCGGGCGGGTCGCGCCGGGCGAACACGT
CCCGGCAAGTGCTTCCGGCTCTACACGGAGAAGAGTTTCAAAGAGGAGCT
CTTGGAGCAGGTGAGTGTCAGATGGTGGTTTGAAAAAACCGAATGGCAGT
TGTTTCATCCTTCATCCTCGCTGTTTGTTACCTTGTGACATTTGGTGCAA
GTTAGGGAAGAATGAGTTTTTATCTTCTACTCGTTCATGGACTTTGATGC
TTCCGGTGCCCAGTTTAGCGTAGGCGCCGTTTCTATCACTTATCCCAATG
TTTGAGAAAACTTGCTCGACAAAGCCATCCTCCCTCAATCGCCGCTTCGC
TCCACCTCCCGCCGCTCCCGGAACCACCCACCAAACGGCCGCAAAACCAA
ACGGCCGGATACAGACATACCCTGAGATTTTGCGGTCGAAGATGAGCACG
GTGGTGCTGACGCTGCTCAAGCTGGGCATTACGGACCTCGTGCACTTTGA
CTTCATGGACCCGCCTGCCCCCGAAACGCTCATGCGCGCCCTCGAGCTAC
TCAACTACCTAGGGGCCCTCGACGACGACGGTCAGTGGGCCAGAGCGAAG
AGCTTGTTTTGTTTTGAACGTTTCATTTCTGCCGTTTGCTCCTTTGCTTC
GATTGTTTTCGTCTCTTTTGACTTTGCGTGTTTCGTTTCCGTTAAGTTGA
AATCGTTCAGTTTTGCGCTCTGGCGGCTGGGAGGAGCGTCTTGTGGTCTG
TTTCAAAGAAAACATGGCTGTTTGGGTGTTTGTGGCTTTGGGGTTGCGGA
AAAGCTTCATGCTGTGCGAAAAGAGCTCCTTGCAGCGTTTCGCTCATCCT
ATTCCGCCTTTATCGCAGCCCTTCTTTTCTCAGGACTAATTTTATCGCCT
TCTGCCCTTGCCCTTGCACTGCCCGTTCTGCCCAATGCCTTGCAGGCAAC
CTGACAGAGCTGGGCAGCCAGATGAGCGAGCTGCCGCTGGACCCGCAGCT
TTCCAAAATGCTGCTGGCGAGCCCCGACTACAACTGCAGTAACGAGGTCC
TCACCATCGTCGCCATGCTCTCCGTGCCGCAGGTATTATGTATTGTAGGC
TGGCAAAAGCGGCATTTAGGAATATGGGAGCCCCCTAGCTGTTGCTGACG
AGGGCTCTGCTCTGGTTCTGGCCGGCAAGAAGGCCGCATCCCGCGAAAGC
CCGCGATTAGGGTTTCCTTCTCAAAGCCTTCCGACGCTACTGGACTAAGG
GCATCACCTGCCTTACAACTCTGTCGACCCGCCTTGGGCACCCGCGCTCC
CTTCCTCGCTTCTGTCTCCGCCACCGTCGTCATCCGCGGCCACCGTCGTC
ACCTGGCAGGTGTTCATGCGACCAAAGGAGGCAGCGCAGGCGGCGGACCG
GGCCAAGGCACAGTTCGCGCACATGGACGGCGACCACCTGACGCTGCTCA
ACGCCTATCACGCCTACCAGCAGGCCGGCTGCTCCAAGGACTGGTGCTAC
GAGAACTTCATCAACAGGTGCTCTTCTTTCATGGGACGCTGTGATGCTGG
TGGGCCCCTCACTTTTGATCTTCTTTCCGTTATTTATGTTCCATGATTCG
TTCCTGTCCACTTTCCCTGCTTTTCGTTTTTCGCCACATGTTCCGTTCTC
ACTCGGGATCACCGCTCTGCCGCTGGTCGGCCGACGACTCGTCTGACAAC
GATATTTCTGCTTTGTCTTTTGTTTCACCAGTCTGTCGAGAAGCTAGGTA
ACACCTTTATGGCGCTCATGCTCCTTCGCGCCTCTTCCGCTTTGGGGATC
GTGCCGCTTTGGTGGCCACTTGTTCGTTCTCTTGGTTGCAGCCGTGCGAT
GGGGAGTGCGGAGAGCGTGCGGGAGCAGCTGGGGCGGCTGATGAAGCGGC
TCAACCTGCCGCTCGTGTCGACGGACTTCTCGAGCCGGGATTACTACACC
AATATCAAGAAGGCTATCGTTGCCGGCATGTTCATGCAGGTGAGGGTGGA
GAATGACTATGGACCTAGACGAATGGAGGCTTCTACAAGGAAACGTGGTT
GCTTGGAAACGGAAGCGGAACGGAGGTTATGATTCTTCATTGCTAGACCC
TGTTGCCTGTTTGTATAATTTTGGGGGCAACCTGCTGGTAGGCCCCTGAA
GATTAAAGCTAGTCTCCCTTCCCTGCTGTCGAGGTGGAGAGTGGTTGTAC
CAGACAATGGCTGGCTCCTCTTCTTCTTCTGCTCAAGTCACTATGGATAG
GGTGGCAGCAGGATTGGAGCAGGAAACTGACTCTTTGCCTGCCTCGTTCC
TCTGCCTTCTGCTTCTGGTTCGCTCCTTTCGGGGCCTGCCTCCTCCGTTC
CTGGCCTGGCCTCTCTCTCCCGCTCTTCGGTCTTTCGCCCGGCCCTTCTG
CACAGGTGGCGCACCTCGAGCGGAGCGGACACTACCTGACGGTGAAGGAC
AACCAGGTGGTGTCTCTGCACCCATCGTGTGTGCTCGACGGCAAGCCCAA
GTGGGTTTGCTTCGAAGAGTTTGTGCTCACCACCAAGAACTTTATTCGGA
CCTGCACGGGCGTCCAGCCCGAGTGGCTGGTGGAGATCGCGCCGCATTAC
TTCGACCTCGAGAACTTTCCCGAGTGCGAGGCCAAGCAGGACCTGGAGGC
GACGTACCGCCGCATGCTCCAGCAGCTCTCGTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig710:956..7639-

>mRNA_P-wetherbeei_contig710.1.1 ID=mRNA_P-wetherbeei_contig710.1.1|Name=mRNA_P-wetherbeei_contig710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2049bp|location=Sequence derived from alignment at P-wetherbeei_contig710:956..7639- (Phaeothamnion wetherbeei SAG_119_79)
GGAGTGAACCCCTGGACGGGAAAGCCATACTCGCGGCAGTACTACGACAT
CCTGGCGAAGCGCCAGACGCTGCCGGTGCATCAGTTTCTCGACGAACTGA
CGGAGAAAGTGAAGAACAACCAGGTGGTAGTGGTAGAGGGCGAGACCGGC
AGCGGAAAAACCACGCAGATCCCGCAGTTCCTGGTGGAGGCGGGCTACGG
CAAGGTTGGCTCCAAGTTAGTGGCATGTACACAGCCGAGAAGGGTGGCGG
CAATGAGCATCGCGGCGCGCGTCGCCGACGAGATGGACGTGCCGCTCGGA
GACGTTGTCGGCTACAACATCCGTTTCGAGGCGTGTATCAGTCCGCGCAC
TGTCCTTGCCTTCCTCACGGACGGAATGCTCCTGCGGGAAGCCATGAACG
ACCCAAGGCGCGTTTCCTTCCCCGTTCGATATTCGTGCATCGTGCTCGAC
GAAGCGCACGAGCGGACGCTGGCGACAGACGTTCTGATGGGGCTCCTGAA
GGAAGTCATGATCAAGCGCCCCGACTTGAAGGTGGTAGTGATGTCGGCGA
CGCTAGACGCGGGCAAGTTCCAGACGTACTTCGACAACGCGCCGCTGCTC
AAAGTGCCGGGCCGCATGTTCCCCGTTGAGACGTACTACACGCCTGAGCC
CGAGCGGGACTACGTCGAAGCTGCCATCCGCACCGTCGTGCAGATTCACA
GGTGCGAGGAGCCGGGGGACGTGCTGCTCTTCCTGACGGGCGAAGACGAG
ATCGAGGACGCCTGCCGCCGCATCCGCGCCGAGACGGCCAACCTCGGCGA
GTCGGCTGGCGAGTGCGTCGTCTACCCGCTCTACTCGACGCTGCCGCCGG
CGCAGCAGAAGAAGATCTTCACCGAGGCGCCGGGCCCCAAGACGCCGGGT
GGGCCGCCGGGGCGCAAGGTGGTGGTGAGTACTAACATCGCCGAGACGTC
GCTAACCATCGACGGCGTCGTCTACGTCGTCGACCCCGGCTTCTCTAAGC
AAAAGGTGTACAACCCGCGGATCCGCGTGGAGTCGCTGCTGGTGTCGCCC
ATCTCGCGCGCCTCGGCGAAGCAGCGGGCGGGTCGCGCCGGGCGAACACG
TCCCGGCAAGTGCTTCCGGCTCTACACGGAGAAGAGTTTCAAAGAGGAGC
TCTTGGAGCAGACATACCCTGAGATTTTGCGGTCGAAGATGAGCACGGTG
GTGCTGACGCTGCTCAAGCTGGGCATTACGGACCTCGTGCACTTTGACTT
CATGGACCCGCCTGCCCCCGAAACGCTCATGCGCGCCCTCGAGCTACTCA
ACTACCTAGGGGCCCTCGACGACGACGGCAACCTGACAGAGCTGGGCAGC
CAGATGAGCGAGCTGCCGCTGGACCCGCAGCTTTCCAAAATGCTGCTGGC
GAGCCCCGACTACAACTGCAGTAACGAGGTCCTCACCATCGTCGCCATGC
TCTCCGTGCCGCAGGTGTTCATGCGACCAAAGGAGGCAGCGCAGGCGGCG
GACCGGGCCAAGGCACAGTTCGCGCACATGGACGGCGACCACCTGACGCT
GCTCAACGCCTATCACGCCTACCAGCAGGCCGGCTGCTCCAAGGACTGGT
GCTACGAGAACTTCATCAACAGCCGTGCGATGGGGAGTGCGGAGAGCGTG
CGGGAGCAGCTGGGGCGGCTGATGAAGCGGCTCAACCTGCCGCTCGTGTC
GACGGACTTCTCGAGCCGGGATTACTACACCAATATCAAGAAGGCTATCG
TTGCCGGCATGTTCATGCAGGTGGCGCACCTCGAGCGGAGCGGACACTAC
CTGACGGTGAAGGACAACCAGGTGGTGTCTCTGCACCCATCGTGTGTGCT
CGACGGCAAGCCCAAGTGGGTTTGCTTCGAAGAGTTTGTGCTCACCACCA
AGAACTTTATTCGGACCTGCACGGGCGTCCAGCCCGAGTGGCTGGTGGAG
ATCGCGCCGCATTACTTCGACCTCGAGAACTTTCCCGAGTGCGAGGCCAA
GCAGGACCTGGAGGCGACGTACCGCCGCATGCTCCAGCAGCTCTCGTAG
back to top