mRNA_P-wetherbeei_contig7099.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7099.2.1
Unique NamemRNA_P-wetherbeei_contig7099.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7099.2.1 vs. uniprot
Match: A0A2V7H3H2_9BACT ((2Fe-2S)-binding protein n=3 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7H3H2_9BACT)

HSP 1 Score: 253 bits (646), Expect = 1.650e-84
Identity = 119/149 (79.87%), Postives = 133/149 (89.26%), Query Frame = 1
Query:    1 VARLTINGKAVNFDVDPATPLLWVIREQAGLTGTKYGCGVGQCGACTVHMNGEAVRSCALPVSAAEGKKVTTIEGLAGNGALTKVQKAWIANDVPQCGYCQSGMIMAVSALLKVKPKPTDADIDAAITNICRCGTFQQVREAVHAAAKA 447
            +ARLTINGK    +VDP TPLLW IREQ GLTGTKYGCG+ QCGACTVH++G AVRSC +PV+AAEGKK+TTIEGLA   AL+KVQKAW+ N+VPQCGYCQSGMIMAV+ALLK KPKPTDADIDA ITNICRCGTFQQVR+A+HAAAKA
Sbjct:    1 MARLTINGKTQEINVDPNTPLLWAIREQVGLTGTKYGCGIAQCGACTVHLDGAAVRSCVMPVAAAEGKKITTIEGLANGSALSKVQKAWLDNEVPQCGYCQSGMIMAVAALLKEKPKPTDADIDAKITNICRCGTFQQVRQAIHAAAKA 149          
BLAST of mRNA_P-wetherbeei_contig7099.2.1 vs. uniprot
Match: A0A1Q4BER7_9HYPH ((2Fe-2S)-binding protein n=1 Tax=Rhizobiales bacterium 62-17 TaxID=1895810 RepID=A0A1Q4BER7_9HYPH)

HSP 1 Score: 251 bits (641), Expect = 9.550e-84
Identity = 117/149 (78.52%), Postives = 135/149 (90.60%), Query Frame = 1
Query:    1 VARLTINGKAVNFDVDPATPLLWVIREQAGLTGTKYGCGVGQCGACTVHMNGEAVRSCALPVSAAEGKKVTTIEGLAGNGALTKVQKAWIANDVPQCGYCQSGMIMAVSALLKVKPKPTDADIDAAITNICRCGTFQQVREAVHAAAKA 447
            +ARLT+NGK+   DVDP TPLLWV+R+  GLTGTKYGCGV QCGACTVH++GEA+RSC++PV+ AEGKKVTTIEGLA  G LTKVQKAW+ N+VPQCGYCQSGMIMAV+ALLK KP+PTDADIDA +TNICRCGT+QQVREA+HAAAKA
Sbjct:    1 MARLTVNGKSYTADVDPDTPLLWVLRDSLGLTGTKYGCGVAQCGACTVHIDGEAMRSCSIPVNMAEGKKVTTIEGLAVKGVLTKVQKAWLDNEVPQCGYCQSGMIMAVTALLKEKPQPTDADIDATLTNICRCGTYQQVREAIHAAAKA 149          
BLAST of mRNA_P-wetherbeei_contig7099.2.1 vs. uniprot
Match: A0A537ASE8_9PROT ((2Fe-2S)-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537ASE8_9PROT)

HSP 1 Score: 251 bits (640), Expect = 1.360e-83
Identity = 116/149 (77.85%), Postives = 134/149 (89.93%), Query Frame = 1
Query:    1 VARLTINGKAVNFDVDPATPLLWVIREQAGLTGTKYGCGVGQCGACTVHMNGEAVRSCALPVSAAEGKKVTTIEGLAGNGALTKVQKAWIANDVPQCGYCQSGMIMAVSALLKVKPKPTDADIDAAITNICRCGTFQQVREAVHAAAKA 447
            +ARLTINGK V+ DVDP TPLLW IREQ GLTGTKYGCG+ QCGACTVH++G AVRSC +PV AA+GKK+TTIEGLA  G L++VQ+AW+ +DVPQCGYCQSGMIMAV+ALLK KP PTDADIDAAITNICRCGT+QQVREA+HAAA++
Sbjct:    1 MARLTINGKTVDVDVDPGTPLLWAIREQVGLTGTKYGCGIAQCGACTVHIDGRAVRSCVMPVEAAQGKKITTIEGLAVEGKLSRVQQAWLEHDVPQCGYCQSGMIMAVAALLKEKPNPTDADIDAAITNICRCGTYQQVREAIHAAARS 149          
BLAST of mRNA_P-wetherbeei_contig7099.2.1 vs. uniprot
Match: A0A2V6X6L0_9BACT ((2Fe-2S)-binding protein n=3 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6X6L0_9BACT)

HSP 1 Score: 250 bits (638), Expect = 2.740e-83
Identity = 119/149 (79.87%), Postives = 133/149 (89.26%), Query Frame = 1
Query:    1 VARLTINGKAVNFDVDPATPLLWVIREQAGLTGTKYGCGVGQCGACTVHMNGEAVRSCALPVSAAEGKKVTTIEGLAGNGALTKVQKAWIANDVPQCGYCQSGMIMAVSALLKVKPKPTDADIDAAITNICRCGTFQQVREAVHAAAKA 447
            +AR+TINGK++   VDP+TPLLW IREQAGLTGTKYGCGV  CGACTVH++G+AVRSC LPVS+AEGK+VTTIEGLA    L KVQKAW+  +VPQCGYCQSGMIMAV+ALLK KPKPTDADIDA ITNICRCGTFQQVREA+HAAAKA
Sbjct:    1 MARMTINGKSLELKVDPSTPLLWAIREQAGLTGTKYGCGVAMCGACTVHLDGKAVRSCVLPVSSAEGKQVTTIEGLASGSTLHKVQKAWVDFEVPQCGYCQSGMIMAVAALLKDKPKPTDADIDAGITNICRCGTFQQVREAIHAAAKA 149          
BLAST of mRNA_P-wetherbeei_contig7099.2.1 vs. uniprot
Match: A0A2V6PE89_9BACT ((2Fe-2S)-binding protein n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6PE89_9BACT)

HSP 1 Score: 248 bits (633), Expect = 1.580e-82
Identity = 117/149 (78.52%), Postives = 130/149 (87.25%), Query Frame = 1
Query:    1 VARLTINGKAVNFDVDPATPLLWVIREQAGLTGTKYGCGVGQCGACTVHMNGEAVRSCALPVSAAEGKKVTTIEGLAGNGALTKVQKAWIANDVPQCGYCQSGMIMAVSALLKVKPKPTDADIDAAITNICRCGTFQQVREAVHAAAKA 447
            +ARLTINGK    +VDP+TPLLW +REQ GLTGTKYGCG+ QCGACTVH++G+ VRSC +PV AA GK+VTTIEGLA  G L KVQKAW+ NDVPQCGYCQSGMIMAV+ALLK KPKPTDADID  ITNICRCGTFQQVREA+HAAAKA
Sbjct:    1 MARLTINGKTSEVNVDPSTPLLWALREQVGLTGTKYGCGIAQCGACTVHVDGKPVRSCIMPVGAAVGKRVTTIEGLANGGTLHKVQKAWLDNDVPQCGYCQSGMIMAVAALLKEKPKPTDADIDRTITNICRCGTFQQVREAIHAAAKA 149          
BLAST of mRNA_P-wetherbeei_contig7099.2.1 vs. uniprot
Match: A0A2V6ZY67_9BACT ((2Fe-2S)-binding protein n=4 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A2V6ZY67_9BACT)

HSP 1 Score: 246 bits (629), Expect = 6.440e-82
Identity = 117/149 (78.52%), Postives = 130/149 (87.25%), Query Frame = 1
Query:    1 VARLTINGKAVNFDVDPATPLLWVIREQAGLTGTKYGCGVGQCGACTVHMNGEAVRSCALPVSAAEGKKVTTIEGLAGNGALTKVQKAWIANDVPQCGYCQSGMIMAVSALLKVKPKPTDADIDAAITNICRCGTFQQVREAVHAAAKA 447
            +ARLTINGK+   +VDP TPLLW IREQ GLTGTKYGCGV  CGACTVH++G AVRSC  PVS A GK++TTIEGLA NG L KVQKAW+ N+VPQCGYCQ+GMIMAV+ALLK KPKPTDADID +ITNICRCGTFQQVREA+HAAAKA
Sbjct:    1 MARLTINGKSSEVNVDPNTPLLWAIREQVGLTGTKYGCGVALCGACTVHLDGRAVRSCVTPVSTAVGKQITTIEGLAANGVLHKVQKAWVDNEVPQCGYCQAGMIMAVAALLKDKPKPTDADIDGSITNICRCGTFQQVREAIHAAAKA 149          
BLAST of mRNA_P-wetherbeei_contig7099.2.1 vs. uniprot
Match: A0A536XM75_9PROT ((2Fe-2S)-binding protein n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XM75_9PROT)

HSP 1 Score: 246 bits (628), Expect = 9.150e-82
Identity = 119/147 (80.95%), Postives = 128/147 (87.07%), Query Frame = 1
Query:    7 RLTINGKAVNFDVDPATPLLWVIREQAGLTGTKYGCGVGQCGACTVHMNGEAVRSCALPVSAAEGKKVTTIEGLAGNGALTKVQKAWIANDVPQCGYCQSGMIMAVSALLKVKPKPTDADIDAAITNICRCGTFQQVREAVHAAAKA 447
            RLTINGK+   DVDP TPLLWVIREQ GLTGTKYGCGV QCGACTVHMNG  VRSC++PVSAA G K+TTIEGLA    L KVQKAWI +DVPQCGYCQSGMIMAV+ALL+  PKP+DADIDAAITNICRCGTF QVREA+HAAAKA
Sbjct:    2 RLTINGKSHEVDVDPTTPLLWVIREQVGLTGTKYGCGVAQCGACTVHMNGLPVRSCSVPVSAASGAKITTIEGLASGKTLHKVQKAWIDHDVPQCGYCQSGMIMAVAALLRTNPKPSDADIDAAITNICRCGTFVQVREAIHAAAKA 148          
BLAST of mRNA_P-wetherbeei_contig7099.2.1 vs. uniprot
Match: A0A536SWT5_9PROT ((2Fe-2S)-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SWT5_9PROT)

HSP 1 Score: 246 bits (627), Expect = 1.490e-81
Identity = 118/145 (81.38%), Postives = 126/145 (86.90%), Query Frame = 1
Query:    7 RLTINGKAVNFDVDPATPLLWVIREQAGLTGTKYGCGVGQCGACTVHMNGEAVRSCALPVSAAEGKKVTTIEGLAGNGALTKVQKAWIANDVPQCGYCQSGMIMAVSALLKVKPKPTDADIDAAITNICRCGTFQQVREAVHAAA 441
            RLTINGKA   DVDP TPLLWVIRE  GLTGTKYGCG+ QCGACTVH++G AVRSC+ PVS A GKK+TTIEGLA    L KVQ+AWI NDVPQCGYCQSGMIMAV+ALLK KPKPTDADID AITNICRCGTFQQVREA+HAAA
Sbjct:    3 RLTINGKAQQVDVDPNTPLLWVIRENVGLTGTKYGCGIAQCGACTVHIDGAAVRSCSFPVSGAAGKKITTIEGLAQGATLHKVQQAWINNDVPQCGYCQSGMIMAVAALLKEKPKPTDADIDGAITNICRCGTFQQVREAIHAAA 147          
BLAST of mRNA_P-wetherbeei_contig7099.2.1 vs. uniprot
Match: A0A2V6XLN2_9BACT ((2Fe-2S)-binding protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6XLN2_9BACT)

HSP 1 Score: 245 bits (626), Expect = 1.850e-81
Identity = 114/149 (76.51%), Postives = 135/149 (90.60%), Query Frame = 1
Query:    1 VARLTINGKAVNFDVDPATPLLWVIREQAGLTGTKYGCGVGQCGACTVHMNGEAVRSCALPVSAAEGKKVTTIEGLAGNGALTKVQKAWIANDVPQCGYCQSGMIMAVSALLKVKPKPTDADIDAAITNICRCGTFQQVREAVHAAAKA 447
            + RLTING+++  +V+P+TPLLW +REQ GLTGTKYGCG+ QCGACTVH++G+A+RSC +PVSAA GK+VTTIEGLA NG L KVQKAW  ++VPQCGYCQSGMIMAV+ALLK KP+PTDADIDA+ITNICRCGTFQQVREA+HAAAKA
Sbjct:    1 MTRLTINGRSLEVNVNPSTPLLWALREQVGLTGTKYGCGIAQCGACTVHIDGKAIRSCVMPVSAAVGKQVTTIEGLAANGVLHKVQKAWGDHEVPQCGYCQSGMIMAVAALLKDKPRPTDADIDASITNICRCGTFQQVREAIHAAAKA 149          
BLAST of mRNA_P-wetherbeei_contig7099.2.1 vs. uniprot
Match: A0A1J5PEH7_9ZZZZ (Isoquinoline 1-oxidoreductase subunit alpha n=3 Tax=root TaxID=1 RepID=A0A1J5PEH7_9ZZZZ)

HSP 1 Score: 244 bits (624), Expect = 3.720e-81
Identity = 117/149 (78.52%), Postives = 130/149 (87.25%), Query Frame = 1
Query:    1 VARLTINGKAVNFDVDPATPLLWVIREQAGLTGTKYGCGVGQCGACTVHMNGEAVRSCALPVSAAEGKKVTTIEGLAGNGALTKVQKAWIANDVPQCGYCQSGMIMAVSALLKVKPKPTDADIDAAITNICRCGTFQQVREAVHAAAKA 447
            +A LTINGK+ + DV+P TPLLW IRE  GLTGTKYGCG+ QCGACTVH++G A+RSC + VS A GKK+TTIEGLA NGAL KVQ+AWIANDVPQCGYCQSGMIMAV+ALLK KPKPTD DID AITNICRCGTFQQVREA+HA AKA
Sbjct:    1 MANLTINGKSFDVDVEPDTPLLWAIRENIGLTGTKYGCGIAQCGACTVHVDGVAMRSCGMLVSEAVGKKITTIEGLADNGALHKVQQAWIANDVPQCGYCQSGMIMAVAALLKEKPKPTDKDIDEAITNICRCGTFQQVREAIHAVAKA 149          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7099.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V7H3H2_9BACT1.650e-8479.87(2Fe-2S)-binding protein n=3 Tax=Candidatus Rokuba... [more]
A0A1Q4BER7_9HYPH9.550e-8478.52(2Fe-2S)-binding protein n=1 Tax=Rhizobiales bacte... [more]
A0A537ASE8_9PROT1.360e-8377.85(2Fe-2S)-binding protein n=1 Tax=Betaproteobacteri... [more]
A0A2V6X6L0_9BACT2.740e-8379.87(2Fe-2S)-binding protein n=3 Tax=Candidatus Rokuba... [more]
A0A2V6PE89_9BACT1.580e-8278.52(2Fe-2S)-binding protein n=2 Tax=Candidatus Rokuba... [more]
A0A2V6ZY67_9BACT6.440e-8278.52(2Fe-2S)-binding protein n=4 Tax=unclassified Cand... [more]
A0A536XM75_9PROT9.150e-8280.95(2Fe-2S)-binding protein n=3 Tax=Betaproteobacteri... [more]
A0A536SWT5_9PROT1.490e-8181.38(2Fe-2S)-binding protein n=1 Tax=Betaproteobacteri... [more]
A0A2V6XLN2_9BACT1.850e-8176.51(2Fe-2S)-binding protein n=1 Tax=Candidatus Rokuba... [more]
A0A1J5PEH7_9ZZZZ3.720e-8178.52Isoquinoline 1-oxidoreductase subunit alpha n=3 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7099contigP-wetherbeei_contig7099:943..1392 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1298867.AUES01000001_gene1850
Preferred nameMA20_17490
PFAMsFer2,Fer2_2
Model size450
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07302
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.11e-82
EggNOG OGsCOG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2U6Z6@28211|Alphaproteobacteria,3JQR4@41294|Bradyrhizobiaceae
EC1.3.99.16
Description[2Fe-2S] binding domain
Cds size450
COG categoryC
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186958.013071-CDS-P-wetherbeei_contig7099:942..13921683186958.013071-CDS-P-wetherbeei_contig7099:942..1392Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7099 943..1392 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7099.2.1prot_P-wetherbeei_contig7099.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7099 943..1392 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7099.2.1

>prot_P-wetherbeei_contig7099.2.1 ID=prot_P-wetherbeei_contig7099.2.1|Name=mRNA_P-wetherbeei_contig7099.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp
VARLTINGKAVNFDVDPATPLLWVIREQAGLTGTKYGCGVGQCGACTVHM
NGEAVRSCALPVSAAEGKKVTTIEGLAGNGALTKVQKAWIANDVPQCGYC
QSGMIMAVSALLKVKPKPTDADIDAAITNICRCGTFQQVREAVHAAAKA*
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mRNA from alignment at P-wetherbeei_contig7099:943..1392+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7099.2.1 ID=mRNA_P-wetherbeei_contig7099.2.1|Name=mRNA_P-wetherbeei_contig7099.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig7099:943..1392+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGCACGCCTGACAATCAATGGTAAAGCAGTCAACTTCGACGTCGATCC GGCCACCCCCCTGCTCTGGGTGATCCGCGAACAGGCCGGCCTGACCGGCA CCAAGTACGGCTGCGGCGTCGGCCAGTGTGGCGCCTGCACGGTCCACATG AACGGCGAAGCGGTGCGCTCCTGCGCCCTGCCGGTCAGCGCGGCCGAAGG CAAGAAGGTCACCACCATCGAGGGACTCGCCGGCAACGGCGCGCTCACCA AGGTGCAGAAGGCCTGGATCGCCAACGACGTGCCGCAGTGCGGCTACTGC CAGTCGGGCATGATCATGGCGGTCTCGGCGCTGCTCAAGGTCAAGCCCAA GCCCACGGACGCGGACATCGACGCCGCGATCACCAACATCTGCCGCTGCG GGACCTTCCAGCAGGTCCGCGAAGCCGTGCACGCAGCGGCCAAGGCATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7099:943..1392+

>mRNA_P-wetherbeei_contig7099.2.1 ID=mRNA_P-wetherbeei_contig7099.2.1|Name=mRNA_P-wetherbeei_contig7099.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig7099:943..1392+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGCACGCCTGACAATCAATGGTAAAGCAGTCAACTTCGACGTCGATCC
GGCCACCCCCCTGCTCTGGGTGATCCGCGAACAGGCCGGCCTGACCGGCA
CCAAGTACGGCTGCGGCGTCGGCCAGTGTGGCGCCTGCACGGTCCACATG
AACGGCGAAGCGGTGCGCTCCTGCGCCCTGCCGGTCAGCGCGGCCGAAGG
CAAGAAGGTCACCACCATCGAGGGACTCGCCGGCAACGGCGCGCTCACCA
AGGTGCAGAAGGCCTGGATCGCCAACGACGTGCCGCAGTGCGGCTACTGC
CAGTCGGGCATGATCATGGCGGTCTCGGCGCTGCTCAAGGTCAAGCCCAA
GCCCACGGACGCGGACATCGACGCCGCGATCACCAACATCTGCCGCTGCG
GGACCTTCCAGCAGGTCCGCGAAGCCGTGCACGCAGCGGCCAAGGCATAA
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