mRNA_P-wetherbeei_contig709.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: D8LNZ8_ECTSI (60S ribosomal export protein NMD3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ8_ECTSI) HSP 1 Score: 607 bits (1566), Expect = 1.430e-208 Identity = 340/611 (55.65%), Postives = 420/611 (68.74%), Query Frame = 1
Query: 337 IMAPGADATAGNDKASPVAAANRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRA-RQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEKEEVEEIG------RREAAAVETDYERFLQQLEADKEMRQQVNLYRRPAAGAGTAFGTRGVAAASALGTGASAMETGEDGGGSEADVEEVRLEELLDDLMLDXTSXXXXXXXXXXXXXXXXXXXXXXVFAAGAAPAPSQVWQGFGEDDPDL 2148
++AP D A P ++PT+LCCMC + I PNPT MC CI +Q+DITEGI NLT++QCRGC+R+LRP WV LESREL+A+CLRKISGLK VKL+DA+WIWTEPHSRRLK++LTVQKEV NGA++QQA VV FVVRNQQCDTC A+FT+NTW AVVQVRQRVDHKRTFFYLEQLILKHNAH+ C ++T +DGMDF+FTE+S +A+FVDFLE VVP KVKHSKKL+SADNHSN FNF +TYLVT+ PVCK+DLVLLPKRLA LG++ RL + QR+T A+ VDPLTAQTA+++ ++YWR+EFP LL S RL +V LG EPLPE P+AP R R R+AR A V LARE DLG ND + TA +HLGH++RAGDT+L YD+++ANL E G+A G + +PDVV+V+K Y R W+L ELEK+ + +R+ AA E DYERFLQQLE+DK+MR+QVNLY+ +G+AA A G AME E E D EEVRL+ELLD + LD + +F AGAAPAP+ + +DDP+L
Sbjct: 3 VVAPPTDGLAAPPPPEPE---KQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLAYDVSSANLPE--GEAT----GDLKGRLPDVVLVRKVY-------------PRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYK------------QGLAAKPAAADGDGAMEDVE-----EMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASAS-------IFEAGAAPAPNA--ELLLDDDPEL 565
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: A0A835ZB23_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB23_9STRA) HSP 1 Score: 590 bits (1520), Expect = 4.980e-202 Identity = 332/596 (55.70%), Postives = 405/596 (67.95%), Query Frame = 1
Query: 373 DKASPVAAANRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRA---RQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEKEEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYRRPAAGAGTAFGTRGVAAASALGTGASAMETGEDGGGSEADVEEVRLEELLDDLMLDXTSXXXXXXXXXXXXXXXXXXXXXXVFAAGAAPAPSQVWQGFG-EDDPDL 2148
D P +A L TV CC+C I+PNPT MC QCI +Q+DITEGI TI+QCRGC R+L+P WV A LESREL+AICLRK+SGL VKL+DA+W+WTE HSRRLKL+LTVQKEV NGAI+QQA +VEF VRNQQC CQAS+TNNTWKAVVQ+RQRVDHKRTFFYLEQLILKHNAH N V+T +DGMDFF+ ER+QAA+ + FLE+V+P ++K+SKKLISADNHSNT+NF +TYLVTVAPVCK+DLVLLP RLA LG RL +VQR+++ + LVDP+TAQTA+++ D Y RHEF LL S RL FV LG EPLP LP+AP A R RRAR A VT+ARE DLG+ND Q TA +HLGHL++AGDT+L YD+ +ANL ED L +TA+PDVV+V+K Y +G +RAWRL LEK+ E+ +R+A A + DYERF+QQLEADKEMR+QVNL++ A GA A +TG +E D E++R+EELLDD+ LD VF+AG AP + EDD DL
Sbjct: 5 DVRPPPSALPELATVACCICSAPIKPNPTHMCVQCIRTQVDITEGIALKPTIFQCRGCMRWLKPNWVEATLESRELMAICLRKVSGLNRVKLVDASWVWTEAHSRRLKLKLTVQKEVQNGAILQQALIVEFTVRNQQCTECQASYTNNTWKAVVQIRQRVDHKRTFFYLEQLILKHNAHVNAINVQTHKDGMDFFYAERNQAARMLSFLESVIPCRIKNSKKLISADNHSNTYNFHYTYLVTVAPVCKDDLVLLPARLAETLGQFARLAVVQRISNGIALVDPVTAQTADVNVDHYARHEFVALLSSTRLVPFVVLGLEPLP---LPSAPTMAQGRRMRRARLAEVTVARECDLGANDTQFTAISHLGHLLKAGDTVLGYDVASANLPEDHLRGL-------KTALPDVVLVRKVYTSGAG-------------------KRAWRLEALEKDREAELSKRDADAHDADYERFMQQLEADKEMRRQVNLFKDLAIGA--------------------AAKTGGSDDDNEVDEEQIRVEELLDDMRLDDPDAAPDDGDAQ-------------VFSAGEAPGVNFAALALDDEDDDDL 538
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV) HSP 1 Score: 480 bits (1235), Expect = 2.500e-159 Identity = 246/477 (51.57%), Postives = 320/477 (67.09%), Query Frame = 1
Query: 406 LPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEK-EEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYR 1833
LP +LCCMC + I+ N MC C+ Q+D+TEGI K + ++QCRGC ++ RPPWVAA+LESRELLAICL+KISGL VKL+DA W+WTEPHS+RLKL+LTVQKEV NGAI+QQ+FVV F+VRNQQCD CQASFTNN+WKAVVQVRQ+VDHKRTFFYLEQLILKH H +E+ DG+DFFF ER+ A +FVDFL VP+K+K +KKLISADNHSNT N+ FTY V +A VCK+DLV LP +LA +LG++ LC+V +VT ++H++DP T Q AE+ D+YWR+ F L S +L + L + PL L P R R+ R A + + R D G ND + TTHLG L+ GDT + YDL+ + + L AG +PDV++V+K + R R W+L+ +E E + + E E DY+ FL +LE DKEMR ++N+Y+
Sbjct: 9 LPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPLQIPTLGGVPVRT-NRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLDEAG----ITLPDVILVRKQF-----------------LRRVQKRSRNWKLKNIEGIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYK 463
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: A0A7S2WJE1_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJE1_9STRA) HSP 1 Score: 478 bits (1230), Expect = 6.660e-158 Identity = 270/545 (49.54%), Postives = 361/545 (66.24%), Query Frame = 1
Query: 388 VAAANRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWR------HEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEKEEVEEIGR-REAAAVETD---YERFLQQLEADKEMRQQVNLYRRPAAGAGTAFGTRGVAAASALGTGASAMETGEDGGGSEADVEEVRLEELLDDL 1992
VAA L TVLCC CG I NP+ MCA C+ + DITEGI L++++CRGC+R+LRP WV A+LES+EL+A+CLRKI GL V L+DA WIWTEPHS RLK+++T+QKEV GAI+QQ+FVVEFV+RNQQC+ CQ +T+ TWKAVVQVRQRVDHKRTF+YLEQL+LKHN H+ C +++ RDGMDF+F E+++A +F DFL+ +PV++K++KKLIS+DNHSN FNF FT+L + P+CK+DL +LP RLA L + L LV+RVT +HLVDPLT A +D Y + F ++ + RL ++ LG EP+ + A + + + R A V +AR DLG ND + +HLGH++R GDT+L YD++AANL +DA A A+P+VV+V+K YG +S ++R W LR+LE + VEE R R+ +E+D YERF+QQLE DKEMR+ VNLYRR A G R AAA+ +E E G E D E+V ++ELL+ L
Sbjct: 10 VAATPGLATVLCCQCGNPIAANPSMMCAHCLSVRSDITEGIATQLSVHRCRGCERWLRPSWVTAELESKELMALCLRKIKGLSKVNLVDAQWIWTEPHSMRLKIKVTIQKEVDGGAILQQSFVVEFVIRNQQCEDCQKQYTDGTWKAVVQVRQRVDHKRTFYYLEQLLLKHNVHSRCISIQSFRDGMDFYFAEKNEAVRFTDFLQGNIPVRIKNTKKLISSDNHSNIFNFKFTFLCIIIPLCKDDLTVLPVRLAKTLSDISPLVLVERVTRLVHLVDPLTCDRATFDSDHYGKLTSGVESSFGGIMSAPRLIEYIVLGIEPILASERAGAASKVFKSKTRLAHVEVARASDLGVNDTKFHTVSHLGHILRTGDTVLGYDVSAANL-DDADVARIE----KRRALPEVVLVRKLYGVES-------------------QRRGWTLRKLEYDAVEEPTRTRKKDDMESDSADYERFIQQLEGDKEMRKHVNLYRREA-------GPRKAAAAAV-----DPLEEDE-GEEDEMDEEQVHIDELLEGL 517
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA) HSP 1 Score: 465 bits (1197), Expect = 1.280e-153 Identity = 239/481 (49.69%), Postives = 323/481 (67.15%), Query Frame = 1
Query: 394 AANRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEKEEVEEIGRREAAAV-ETDYERFLQQLEADKEMRQQVNLYR 1833
A + LP +LCC+C + I+ N MC C+ Q+D+TEGI K + ++QCRGC ++ RP WV+A+LESRELLAICL+KI+GL VKL+DA WIWTEPHS+RLKL+LTVQKEV NGAI+QQ+F+V F+VRNQQCD CQASFTN++WKAVVQVRQ+V+HKRTFFYLEQLILKH H +E+ DG+DFFF ER+ A +FVDFL+ VP+ +K +KKLISADNHSNT N+ FTY V +APVCK+DLV LP +LA +LG++ LCLV +VT ++H++DP T Q AE+ ++YWR+ F L S +L + L + P+ E + P R+ R A + + R D G ND + +HLG L+ GDT + YDL + + L AG +PDVV+V+K + RQR W+L+ +E +E +G+++ + DYE FL LE DKEMR ++N+Y+
Sbjct: 4 AEHSLPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPM-EIPMKGGVPVRTNRKTRLAELEIVRNSDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLVTSVFNDADTKPLDEAG----ITLPDVVLVRKQF-----------------LRRVQKRQRKWKLKTIEG--IESMGKKDDPTKHDLDYEHFLNDLEQDKEMRSRINIYK 460
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: W2I7I2_PHYPR (60S ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR) HSP 1 Score: 465 bits (1197), Expect = 1.370e-153 Identity = 248/481 (51.56%), Postives = 326/481 (67.78%), Query Frame = 1
Query: 400 NRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQ--RRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEK-EEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYR 1833
+++PT+LCCMC I N C C+ SQ+D+TEGI K + I+QCRGC R+ RPPWVAA+LESRELLA+CL+KI+ L VKLIDA WIWTEPHSRRLKL+LTVQKEV + I+QQ+FVV FVVRNQQCD CQASF N +W+AVVQVRQRVDHKRTFF+LEQLILKH AH +E+ DG+DFFF+ER+ A +FVDFL+ VP+KVK +KKLISADNHSNT N+ FTY V +APVCK+DLVLLP +LA LG+M LCLVQ VT ++H+VDP T Q AE+ +++YWR+ F L + F L + P+ +P+ RA + R+ R A + + R+ D G ND + +HLG L+ GD+ YDLT+A + L +G +PDVV+V+K + R R W+L+++E E+ + + + + E DYE+FL +LE DKE+R Q+NLY+
Sbjct: 6 SQMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPMA---IPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSG----MTLPDVVLVKKMF-----------------PRRIQKRARNWKLKKMEGVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYK 462
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: A0A485KPH2_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPH2_9STRA) HSP 1 Score: 465 bits (1196), Expect = 2.060e-153 Identity = 238/477 (49.90%), Postives = 319/477 (66.88%), Query Frame = 1
Query: 406 LPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEK-EEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYR 1833
LP +LCC+C + I+ N MC C+ Q+D+TEGI K + I+QCRGC ++ RPPWV+ADLESRELLAICL+KI+GL VKL+DA WIWTEPHS+RLKL+LTVQKEV NGAI+QQ+F+V F+VRNQQCD CQASFTN++WKAVVQVRQ+V+HKRTFF+LEQLILKH H +E+ DG+DFFF ER+ A +FVDFL+ VP+ +K +KKLISADNHSNT N+ FTY+V +APVCK+DLV LP +LA +LG++ LCLV +VT ++H++DP T Q AE+ D+YWR F L S +L + L + P+ E + P R+ R A + + R D G ND + +HLG L+ GDT + YDL+ + + L AG +PDV++V+K + R R W+L+ +E E + + + + DYE FL LE DKEMR ++N+Y+
Sbjct: 9 LPNILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIIHQCRGCLKWSRPPWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYMVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRSPFKALCSSKKLTEYTVLDSTPM-EIPVKGGVPVRTNRKTRLAELEVVRNVDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLDEAG----ITLPDVILVRKQF-----------------LRRVQKRSRKWKLKTIEGIEPAVPLKKADQTKQDLDYEHFLNDLEEDKEMRAKINIYK 463
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: A0A024UHG0_9STRA (60S ribosomal export protein NMD3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UHG0_9STRA) HSP 1 Score: 464 bits (1193), Expect = 5.820e-153 Identity = 239/479 (49.90%), Postives = 320/479 (66.81%), Query Frame = 1
Query: 400 NRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEK-EEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYR 1833
+ LP +LCC+C + I+ N MC C+ Q+D+TEGI K + ++QCRGC ++ RP WV+ADLESRELLAICL+KI+GL VKL+DA WIWTEPHS+RLKL+LTVQKEV NGAI+QQ+F+V F+VRNQQCD CQASFTN++WKAVVQVRQ+V+HKRTFF+LEQLILKH H +E+ DG+DFFF ER+ A +FVDFL+ VP+ +K +KKLISADNHSNT N+ FTY V +APVCK+DLV LP +LA +LG++ LCLV +VT ++H++DP T Q AE+ D+YWR+ F L S +L + L + PL + P R R+ R A V + R D G ND + THLG L+ GDT + YDL+ + + L AG ++PDVV+V+K + R R W+L+ +E E + + + + DYE FL LE DK+MR ++N+Y+
Sbjct: 7 HELPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLTEYTVLDSSPLEISTKGGIPVRT-NRKTRLADVDIVRNSDFGVNDMRFHTVTHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLDEAG----ISLPDVVLVRKQF-----------------LRRVQKRSRKWKLKTIEGIEPTMPLKKADQTKHDLDYEHFLNDLEEDKDMRSRINIYK 463
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: A0A0P1APN2_PLAHL (60S ribosomal export protein NMD3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APN2_PLAHL) HSP 1 Score: 463 bits (1191), Expect = 1.050e-152 Identity = 244/481 (50.73%), Postives = 329/481 (68.40%), Query Frame = 1
Query: 400 NRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQ--RRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEK-EEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYR 1833
+ +PT+LCCMC I N C C+ SQ+D+TEGI K + I+QCRGC R+ RPPWVAADLESRELLA+CL+KI+ L VKLIDA W+WTEPHSRRLKL+LTVQKEV + I+QQAFVV FVVRNQQCD CQASF N +W+AVVQVRQRVDHKRTFF+LEQLILKH AH +E+ DG+DFFF+ER+ A +FVDFL+ VP+KVK +KKLISADNHSNT N+ FTY V +APVCK+DLV+LP +LA LG++ LCL+Q VT ++H+VDP T Q AE+ +++YWR+ F L +++F L + P+ +P+ RA + R+ R A + + R+ D G ND + +HLG ++ AGD+ YDLT+A + L +G ++PDVV+V+K + R R W+L+++E E+ + + + + E DYE+FL +LE +K++R Q+NLY+
Sbjct: 3 SHMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAADLESRELLALCLKKITNLNRVKLIDANWVWTEPHSRRLKLKLTVQKEVLSKMIMQQAFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVVLPVKLARMLGNISCLCLIQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFHALRSIKAMSNFTILDSSPMA---IPSGGGRAIRVSRKTRLADLEIVRDVDFGVNDTRFRTVSHLGMILHAGDSARGYDLTSAVFNDADLVPLVQSG----ISMPDVVLVKKTF-----------------PSRIQKRTRNWKLKKIEGVEQAGTVRKTDLSKEEQDYEQFLDELEENKDLRSQINLYK 459
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: D0MSQ0_PHYIT (60S ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT) HSP 1 Score: 463 bits (1191), Expect = 1.160e-152 Identity = 247/481 (51.35%), Postives = 325/481 (67.57%), Query Frame = 1
Query: 400 NRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQ--RRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEK-EEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYR 1833
+++PT+LCCMC I N C C+ SQ+D+TEGI K + I+QCRGC R+ RPPWVAA+LESRELLA+CL+KI+ L VKLIDA WIWTEPHSRRLKL+LTVQKEV + I+QQ+FVV FVVRNQQCD CQASF N +W+AVVQVRQRVDHKRTFF+LEQLILKH AH +E+ DG+DFFF+ER+ A +FVDFL+ VP+KVK +KKLISADNHSNT N+ FTY V +APVCK+DLVLLP +LA LG+M LCLVQ VT ++H+VDP T Q AE+ +++YWR+ F L + L + P+ +P+ RA + R+ R A + + R+ D G ND + +HLG L+ GD+ YDLT+A + L +G +PDVV+V+K + R R W+L+++E E+ + + + + E DYE+F+ +LE DKEMR Q+NLY+
Sbjct: 6 SQMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPMA---IPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSG----LTLPDVVLVKKMF-----------------PRRIQKRARNWKLKKMEGVEQAGPVRKADLSKEEQDYEQFMDELEEDKEMRSQINLYK 462 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig709.3.1 >prot_P-wetherbeei_contig709.3.1 ID=prot_P-wetherbeei_contig709.3.1|Name=mRNA_P-wetherbeei_contig709.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=609bp MATMIMAPGADATAGNDKASPVAAANRLPTVLCCMCGIGIRPNPTGMCAQback to top mRNA from alignment at P-wetherbeei_contig709:4464..7964+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig709.3.1 ID=mRNA_P-wetherbeei_contig709.3.1|Name=mRNA_P-wetherbeei_contig709.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3501bp|location=Sequence derived from alignment at P-wetherbeei_contig709:4464..7964+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig709:4464..7964+ >mRNA_P-wetherbeei_contig709.3.1 ID=mRNA_P-wetherbeei_contig709.3.1|Name=mRNA_P-wetherbeei_contig709.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1827bp|location=Sequence derived from alignment at P-wetherbeei_contig709:4464..7964+ (Phaeothamnion wetherbeei SAG_119_79)back to top |