mRNA_P-wetherbeei_contig708.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig708.4.1 vs. uniprot
Match: A0A7S4DAB1_HETAK (E3 ubiquitin-protein ligase listerin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAB1_HETAK) HSP 1 Score: 298 bits (764), Expect = 1.580e-88 Identity = 138/213 (64.79%), Postives = 166/213 (77.93%), Query Frame = 3
Query: 1512 DMAVLALVAFRRTLHAFPALVRAWWSDDCERRLRPWVEATTQEFVSPAVVQHESDLIAAAAAGGRW-DPSEMTVRASRVSREVTATYVKDECALEVTVKLPPTYPLRNVEVQCTRRLGIPEARWRRWVLQIVTLLSMQDGTVLDAVLLWKRNVDKEFEGLEPCVICYSILHPRDMALPSLECRQCKNKFHSRCLYTWFQSSHKSKCPLCQQPW 2147
DM + F +T+ AFPALVR WWS DC R L V T+E V P ++Q E D I A A G+W D SEMTVR S+VSREVTATY+KDEC+LEV +K+P +YPL NVEV CTRRLG+ E RWRRWVLQIVTLL QDG+VLDAVLLWK+NVD+EFEG++PC IC+SIL+P+D ALP+L C+ C+NKFHS CLY WF +S K+KCPLCQQP+
Sbjct: 153 DMMPFCMKVFYQTVEAFPALVRHWWSHDCRRGLNGRVSRFTEEHVGPMIMQREIDKIREAEANGKWGDTSEMTVRGSKVSREVTATYMKDECSLEVVIKVPASYPLANVEVNCTRRLGVAEGRWRRWVLQIVTLLGTQDGSVLDAVLLWKQNVDREFEGVDPCPICFSILYPKDHALPTLPCKTCQNKFHSACLYKWFHTSRKNKCPLCQQPF 365
BLAST of mRNA_P-wetherbeei_contig708.4.1 vs. uniprot
Match: D8LU39_ECTSI (E3 ubiquitin-protein ligase listerin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU39_ECTSI) HSP 1 Score: 324 bits (830), Expect = 2.080e-88 Identity = 164/300 (54.67%), Postives = 209/300 (69.67%), Query Frame = 3
Query: 1278 LSWLLLMER-RPLLELAVENVWAGLSAFVASRLGMPGPLVRTCAHFLRPHM-------RGLRRRFSRAGALERVQVWRLDPRRRPGDMAVLALVAFRRTLHAFPALVRAWWSDDCERRLRPWVEATTQEFVSPAVVQHESDLIAAAAAGGRWDPS-EMTVRASRVSREVTATYVKDECALEVTVKLPPTYPLRNVEVQCTRRLGIPEARWRRWVLQIVTLLSMQDGTVLDAVLLWKRNVDKEFEGLEPCVICYSILHPRDMALPSLECRQCKNKFHSRCLYTWFQSSHKSKCPLCQQPWA 2150
L+WLL +E R EL ++ A FVA R G P++ C LR G SR G + V+V RLDPR+ P D+A LAL + RT+H FPAL R+WWSDDC R LR WV T+ VSPA++Q E+ +I A G WD EM+VRAS SR+V A+Y+K+EC LE ++LPP YPLRNVEV C++R+G+ E+RWR+WVLQIVTLLS+QDG+VLDAV++WK+NVDKEFEG+EPCVICYS+LHP+ M LP + C+ C N+FHS CLY WF +SHK+KCP+CQQ WA
Sbjct: 1888 LTWLLWLEHCRRASELEAKSRSAA-RVFVA-RAGALSPVMEACFRVLRASQDDGGRSNSGSIGGASRLGPAQAVRVSRLDPRK-PHDLARLALAVYFRTVHVFPALSRSWWSDDCARGLRVWVADFTKRHVSPALIQIEAQIITRATDKGVWDDGGEMSVRASANSRQVVASYLKEECTLEAVIQLPPDYPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKSMDLPQMTCKTCNNRFHSSCLYKWFHTSHKNKCPICQQTWA 2184
BLAST of mRNA_P-wetherbeei_contig708.4.1 vs. uniprot
Match: A0A835ZJN0_9STRA (E3 ubiquitin-protein ligase listerin (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJN0_9STRA) HSP 1 Score: 264 bits (674), Expect = 1.560e-78 Identity = 120/169 (71.01%), Postives = 139/169 (82.25%), Query Frame = 3
Query: 1644 VSPAVVQHESDLIAAAAAGGRWDPSEMTVRASRVSREVTATYVKDECALEVTVKLPPTYPLRNVEVQCTRRLGIPEARWRRWVLQIVTLLSMQDGTVLDAVLLWKRNVDKEFEGLEPCVICYSILHPRDMALPSLECRQCKNKFHSRCLYTWFQSSHKSKCPLCQQPWA 2150
V+PA++ E +++A AGGRWD + VRAS EV ATYVKDE L +T++LPP+YPLR VEV C R+LGI EARWRRWVLQIVTLLS++DG+VLDAVLLWKRNVDKEFEG+EPCVICYS LHPRDMALP+L CR C N+FH CLY WFQ+SHKSKCPLCQQ WA
Sbjct: 3 VTPAIIAREIAHLSSARAGGRWDSEGLAVRASEAVGEVVATYVKDESELSMTIRLPPSYPLRAVEVSCARQLGIGEARWRRWVLQIVTLLSVRDGSVLDAVLLWKRNVDKEFEGMEPCVICYSTLHPRDMALPTLACRTCSNRFHPSCLYKWFQTSHKSKCPLCQQTWA 171
BLAST of mRNA_P-wetherbeei_contig708.4.1 vs. uniprot
Match: A0A2P4YRS2_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YRS2_9STRA) HSP 1 Score: 277 bits (708), Expect = 2.260e-78 Identity = 127/229 (55.46%), Postives = 165/229 (72.05%), Query Frame = 3
Query: 1476 QVWRLDPRRRPGDMAVLALVAFRRTLHAFPALVRAWWSDDCERRLRPWVEATTQEFVSPAVVQHESDLIAAAA-----AGGRWDPSEMTVRASRVSREVTATYVKDECALEVTVKLPPTYPLRNVEVQCTRRLGIPEARWRRWVLQIVTLLSMQDGTVLDAVLLWKRNVDKEFEGLEPCVICYSILHPRDMALPSLECRQCKNKFHSRCLYTWFQSSHKSKCPLCQQPW 2147
++W L R + L F RT+ PA+VR+WW+DDC R R W ++ ++P+V+ E DLI A G WD EMTV+ SRVSRE+T TY+KDECALE+ V++P +YPLR VEV+CT+R+GI E RWRRWVLQI+ + S +DG++LDAVLLWKRNVDKEFEG+EPC ICYSIL+P++M LPSL C+ C NK+H+ CLY WF S K+KCP+CQQP+
Sbjct: 318 EIWSLHKAR----VFQLGTCVFFRTVVRLPAMVRSWWNDDCSRAARSWAAKYFEDHITPSVLAAELDLIQKAGENTLTGGESWDDEEMTVKGSRVSREITTTYMKDECALEMVVRVPSSYPLRCVEVECTKRIGISEDRWRRWVLQIIRVTSSRDGSLLDAVLLWKRNVDKEFEGVEPCPICYSILNPKNMGLPSLPCKTCNNKYHNSCLYKWFNQSGKNKCPICQQPF 542
BLAST of mRNA_P-wetherbeei_contig708.4.1 vs. uniprot
Match: A0A6G0WLG8_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLG8_9STRA) HSP 1 Score: 287 bits (735), Expect = 1.680e-76 Identity = 145/294 (49.32%), Postives = 192/294 (65.31%), Query Frame = 3
Query: 1272 LMLSWLLLMERRPLLELAVENVWAGLSAFVASRLGMPGPLVRTCAHFLRPHMRGLRRRFSRAGALERVQVWRLDPRRRPGDMAVLALVAFRRTLHAFPALVRAWWSDDCERRLRPWVEATTQEFVSPAVVQHESDLIAAAAAG-GRWDPSEMTVRASRVSREVTATYVKDECALEVTVKLPPTYPLRNVEVQCTRRLGIPEARWRRWVLQIVTLLSMQDGTVLDAVLLWKRNVDKEFEGLEPCVICYSILHPRDMALPSLECRQCKNKFHSRCLYTWFQSSHKSKCPLCQQPWA 2150
L+L W L + P E + V + L AFV R + PL+ C H L+ L + GA LD R +A LA F RT+ P +VR WW+D+C R R WV +E VSP ++ E I AA+A WDP EMTVR S+VSRE+T TY+KDEC+LE+ +++PP+YPLR VEV+CT+R+GI E RWRRW+LQI+ + + QDG++LDAVLLWK NVDKEF+G+EPC IC+SIL+P+ M LP+L CR C NK+H+ CLY WF S K+KCP+CQQP++
Sbjct: 1350 LLLVWDLYLRMFP--ETSNPLVTSALGAFVG-RQKLLTPLLTLCGHVLQSSKVQLGSNEAVEGAFPA-----LDGLDREIAVAPLAAAVFYRTVVKLPTMVRLWWNDECSRSARSWVSKFCEELVSPLMLNEEIQSIQAASAEQSLWDPDEMTVRGSKVSREITTTYLKDECSLEMVIRVPPSYPLRTVEVECTKRIGISEERWRRWILQILKVTTSQDGSLLDAVLLWKSNVDKEFDGVEPCPICFSILNPKTMGLPNLPCRTCNNKYHNSCLYKWFNQSSKNKCPICQQPFS 1635
BLAST of mRNA_P-wetherbeei_contig708.4.1 vs. uniprot
Match: A0A1V9ZGZ7_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGZ7_9STRA) HSP 1 Score: 281 bits (718), Expect = 2.430e-74 Identity = 124/214 (57.94%), Postives = 161/214 (75.23%), Query Frame = 3
Query: 1506 PGDMAVLALVAFRRTLHAFPALVRAWWSDDCERRLRPWVEATTQEFVSPAVVQHESDLIAAAAAGGRWDPSEMTVRASRVSREVTATYVKDECALEVTVKLPPTYPLRNVEVQCTRRLGIPEARWRRWVLQIVTLLSMQDGTVLDAVLLWKRNVDKEFEGLEPCVICYSILHPRDMALPSLECRQCKNKFHSRCLYTWFQSSHKSKCPLCQQPW 2147
PG +A LA F RT+ P +VR WW+D+C R R WV +E VSP ++Q E I AAA WDP EM VR S+VSREV +Y+KDEC+LE+ V++P +YPLR+VEV+CT+R+GI E RWRRWVLQI+ + S QDG++LDAVLLWK NVD+EF+G++PC ICYSIL+P+ M LP+L C+ CKNK+H+ CLY WF S K+KCP+CQQP+
Sbjct: 1456 PGLLAPLAGALFYRTVVKLPTMVRLWWNDECSRSARSWVAKFCEENVSPLLLQEEIAAIHAAAEKDLWDPEEMNVRGSKVSREVVTSYIKDECSLEMVVRVPASYPLRSVEVECTKRIGISEERWRRWVLQIIKVTSSQDGSLLDAVLLWKSNVDREFDGVDPCPICYSILNPKTMGLPNLSCKTCKNKYHNSCLYKWFNQSSKNKCPICQQPF 1669
BLAST of mRNA_P-wetherbeei_contig708.4.1 vs. uniprot
Match: A0A225WNQ7_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WNQ7_9STRA) HSP 1 Score: 275 bits (702), Expect = 5.920e-74 Identity = 122/206 (59.22%), Postives = 158/206 (76.70%), Query Frame = 3
Query: 1539 FRRTLHAFPALVRAWWSDDCERRLRPWVEATTQEFVSPAVVQHESDLIAAA---AAGGRWDPSEMTVRASRVSREVTATYVKDECALEVTVKLPPTYPLRNVEVQCTRRLGIPEARWRRWVLQIVTLLSMQDGTVLDAVLLWKRNVDKEFEGLEPCVICYSILHPRDMALPSLECRQCKNKFHSRCLYTWFQSSHKSKCPLCQQPW 2147
F RT+ PA+VR+WW+DDC R R W ++ ++P+V+ E +LI A A G WD EMTV+ SRVSRE+T TY+KDECALE+ V++P +YPLR VEV+CT+R+GI E RWRRWVLQI+ + S +DG++LDAVLLWK NVDKEFEG+EPC ICYSIL+P++M LPSL C+ C NK+H+ CLY WF S K+KCP+CQQP+
Sbjct: 761 FFRTVVRLPAMVRSWWNDDCSRATRSWAAKYFEDHITPSVLAAELELIQKAGTSATGESWDDEEMTVKGSRVSREITTTYMKDECALEMVVRVPSSYPLRCVEVECTKRIGISEDRWRRWVLQIIRVTSSRDGSLLDAVLLWKHNVDKEFEGVEPCPICYSILNPKNMGLPSLPCKTCNNKYHNSCLYKWFNQSGKNKCPICQQPF 966
BLAST of mRNA_P-wetherbeei_contig708.4.1 vs. uniprot
Match: A0A8K1C458_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C458_PYTOL) HSP 1 Score: 279 bits (713), Expect = 1.140e-73 Identity = 122/214 (57.01%), Postives = 163/214 (76.17%), Query Frame = 3
Query: 1506 PGDMAVLALVAFRRTLHAFPALVRAWWSDDCERRLRPWVEATTQEFVSPAVVQHESDLIAAAAAGGRWDPSEMTVRASRVSREVTATYVKDECALEVTVKLPPTYPLRNVEVQCTRRLGIPEARWRRWVLQIVTLLSMQDGTVLDAVLLWKRNVDKEFEGLEPCVICYSILHPRDMALPSLECRQCKNKFHSRCLYTWFQSSHKSKCPLCQQPW 2147
P + +A +F RT+ PA+VRAWW+D+C R LR W +E ++P V+ E +I A++ WD EMTV+ S+VSRE+T TY+KDECALE+ +++P +YPLR+VEV+CTRR+GI E RWRRWVLQI+ + S QDG++LDAVLLWK+NVDKEFEG+EPC ICYSIL+P+ M LP+L C+ C NK+H+ CLY WF S K+KCP+CQQP+
Sbjct: 1586 PSFVTSIAARSFFRTVIRLPAMVRAWWNDECGRGLRSWASKYFEEHITPYVLASELAIIQKASSLNSWDVDEMTVKGSKVSREITTTYMKDECALEMVIRVPSSYPLRSVEVECTRRIGISEDRWRRWVLQIIKVTSAQDGSLLDAVLLWKQNVDKEFEGVEPCPICYSILNPKTMGLPNLSCKTCSNKYHNSCLYKWFNQSGKNKCPICQQPF 1799
BLAST of mRNA_P-wetherbeei_contig708.4.1 vs. uniprot
Match: A0A3R7KUP7_9STRA (E3 ubiquitin-protein ligase listerin n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KUP7_9STRA) HSP 1 Score: 276 bits (706), Expect = 2.250e-73 Identity = 124/229 (54.15%), Postives = 169/229 (73.80%), Query Frame = 3
Query: 1476 QVWRLDPRRRPGDMAVLALVAFRRTLHAFPALVRAWWSDDCERRLRPWVEATTQEFVSPAVVQHESDLIAAAA-----AGGRWDPSEMTVRASRVSREVTATYVKDECALEVTVKLPPTYPLRNVEVQCTRRLGIPEARWRRWVLQIVTLLSMQDGTVLDAVLLWKRNVDKEFEGLEPCVICYSILHPRDMALPSLECRQCKNKFHSRCLYTWFQSSHKSKCPLCQQPW 2147
+VW ++ R + L F RT+ PA+VR+WW+DDC R +R W ++ ++P+V+ E +LI A+ AG +WD EMTV+ SRVSRE+T TYVKDECALE+ +++P +YPLR+VEV+CT+R+GI E RWRRWVLQI+ + + DG++LDAV+LWK NVDKEFEG+EPC ICYSIL+P++M LPSL C+ C NK+H+ CLY WF S K+KCP+CQQP+
Sbjct: 1007 EVWSIEKTR----VFQLGTRVFFRTVVRLPAMVRSWWNDDCSRAMRSWAAKYFEDHITPSVLAAELELIQKASGSTSSAGDQWDEDEMTVKGSRVSREITTTYVKDECALEMVLRVPSSYPLRSVEVECTKRIGISEDRWRRWVLQIIRVTASSDGSLLDAVMLWKGNVDKEFEGVEPCPICYSILNPKNMGLPSLPCKTCSNKYHNSCLYKWFNQSGKNKCPICQQPF 1231
BLAST of mRNA_P-wetherbeei_contig708.4.1 vs. uniprot
Match: A0A3M6VL59_9STRA (E3 ubiquitin-protein ligase listerin n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL59_9STRA) HSP 1 Score: 278 bits (710), Expect = 2.810e-73 Identity = 122/208 (58.65%), Postives = 162/208 (77.88%), Query Frame = 3
Query: 1539 FRRTLHAFPALVRAWWSDDCERRLRPWVEATTQEFVSPAVVQHESDLI-----AAAAAGGRWDPSEMTVRASRVSREVTATYVKDECALEVTVKLPPTYPLRNVEVQCTRRLGIPEARWRRWVLQIVTLLSMQDGTVLDAVLLWKRNVDKEFEGLEPCVICYSILHPRDMALPSLECRQCKNKFHSRCLYTWFQSSHKSKCPLCQQPW 2147
F RT+ PA+VR+WW+DDC R R W +++++P+V+ E LI ++++AG WD EMTV+ SRVSRE+T TYVKDECALE+ V++P +YPLR VEV+CT+R+GI E RWRRWVLQI+ + S +DG++LDAVLLWK NVDKEFEG+EPC ICYSIL+P++M+LPSL C+ C NK+H+ CLY WF S K+KCP+CQQP+
Sbjct: 1657 FFRTVVRLPAMVRSWWNDDCSRATRSWAAKYFEDYITPSVLASELKLIQNASESSSSAGASWDDEEMTVKGSRVSREITTTYVKDECALEMVVRVPSSYPLRCVEVECTKRIGISEDRWRRWVLQIIRVTSSRDGSLLDAVLLWKHNVDKEFEGVEPCPICYSILNPKNMSLPSLACKTCSNKYHNSCLYKWFNQSGKNKCPICQQPF 1864 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig708.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig708.4.1 >prot_P-wetherbeei_contig708.4.1 ID=prot_P-wetherbeei_contig708.4.1|Name=mRNA_P-wetherbeei_contig708.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=681bp MVLDACQGVIAAATAPALPDNSGAAAMARAAGAMSLQRRAAAGGGTASAGback to top mRNA from alignment at P-wetherbeei_contig708:5195..8421- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig708.4.1 ID=mRNA_P-wetherbeei_contig708.4.1|Name=mRNA_P-wetherbeei_contig708.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3227bp|location=Sequence derived from alignment at P-wetherbeei_contig708:5195..8421- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig708:5195..8421- >mRNA_P-wetherbeei_contig708.4.1 ID=mRNA_P-wetherbeei_contig708.4.1|Name=mRNA_P-wetherbeei_contig708.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2043bp|location=Sequence derived from alignment at P-wetherbeei_contig708:5195..8421- (Phaeothamnion wetherbeei SAG_119_79)back to top |