mRNA_P-wetherbeei_contig708.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig708.1.1
Unique NamemRNA_P-wetherbeei_contig708.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig708.1.1 vs. uniprot
Match: A0A835Z6B8_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6B8_9STRA)

HSP 1 Score: 328 bits (840), Expect = 3.610e-109
Identity = 157/202 (77.72%), Postives = 173/202 (85.64%), Query Frame = 1
Query:   10 LAVKMIHKAEVVSTTTLRRVDNEIRVLRRLRHGGIMRLYDVVHAPKCVYLVTDRAGRDLFEFFDEHLEGVSEATAALLLHKIMMPVRYCHAMGVCHRDLKPENILFADTDPFTAASRVLLCDFGLCARVETDAEEAALRAAGRRTRPLGEFCGSPGFFAPEMLVRGSYDGKLADVWSLGCILLELVLGHEDFCRLWMGAYEY 615
            LAVKMI K+ VV+ TTLRRVDNEI  L+RL H GIMRLYDVVHAP+C+Y++TD+AG+DLFEFFD HL+GVSEA AA LL KIM PV YCHA G+CHRDLKPENILFA+   FTAASRVLLCDFGLCARVETDAEEAALR A    R L EFCGSPGFFAPEMLVRG+YDGK AD WSLGCILLELVLGHEDFCRLW+  + +
Sbjct:  132 LAVKMIDKSGVVNVTTLRRVDNEIASLQRLDHPGIMRLYDVVHAPQCIYMITDKAGQDLFEFFDAHLDGVSEAIAAQLLAKIMDPVAYCHAQGICHRDLKPENILFAEKGAFTAASRVLLCDFGLCARVETDAEEAALRRAHAAPRALHEFCGSPGFFAPEMLVRGAYDGKKADAWSLGCILLELVLGHEDFCRLWVSDFNF 333          
BLAST of mRNA_P-wetherbeei_contig708.1.1 vs. uniprot
Match: A0A024TEC5_9STRA (CAMK/CAMKL protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEC5_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.310e-65
Identity = 123/276 (44.57%), Postives = 161/276 (58.33%), Query Frame = 1
Query:    1 PGTLAVKMIHKAEVVSTTTLRRVDNEIRVLR--RLRHGGIMRLYDVVHAPKCVYLVTDRAGRDLFEFFDEHLEGVSEATAALLLHKIMMPVRYCHAMGVCHRDLKPENILFADTDPFTAASRVLLCDFGLCARVETDAEEAALRAAGRRTRPLGEFCGSPGFFAPEMLVRGSYDGKLADVWSLGCILLELVLGHEDFCRLWMGAYEYDKLKVPVHFEAAVAASVAALGRELPSR--LSPELVDFILTALSLDDSRRRTVSDMLRHPWMAAHRLAPT 816
            P  LA+K I+K+++   T L RV +EI  L    LRH  ++ +++V+H  K +YLVT+R G+DLF+FF  H +GVSEATA  +  KI   V++ H  G CHRDLKPENILF   +       V + DFGLCA+V T               PL +FCGSPGFFAPEML+   YDG+ ADVWS+GCILLELVLG+  F + WM AY  D L    HF+  V  +V A+   L S    S E    + + L  D + R T+ D+  HPW   H   P+
Sbjct:  264 PPNLALKAINKSKLTDITGLVRVHSEIAALSDPALRHPSLLCVHEVIHTSKFIYLVTERGGKDLFDFFGPHDKGVSEATALRITFKIAEAVKHMHLHGYCHRDLKPENILFTHDNYM-----VKIVDFGLCAKVGT--------------APLYDFCGSPGFFAPEMLLHDQYDGQKADVWSIGCILLELVLGNTFFLKTWMTAYHLDVLSDRAHFQKLVQTNVTAMHTALASNESYSSEAKSLLKSMLCEDAATRPTIFDIAEHPWFDHHHRQPS 520          
BLAST of mRNA_P-wetherbeei_contig708.1.1 vs. uniprot
Match: W4FSE8_9STRA (CAMK/CAMKL protein kinase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FSE8_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.540e-64
Identity = 120/269 (44.61%), Postives = 160/269 (59.48%), Query Frame = 1
Query:    7 TLAVKMIHKAEVVSTTTLRRVDNEIRVLR--RLRHGGIMRLYDVVHAPKCVYLVTDRAGRDLFEFFDEHLEGVSEATAALLLHKIMMPVRYCHAMGVCHRDLKPENILFADTDPFTAASRVLLCDFGLCARVETDAEEAALRAAGRRTRPLGEFCGSPGFFAPEMLVRGSYDGKLADVWSLGCILLELVLGHEDFCRLWMGAYEYDKLKVPVHFEAAVAASVAALGRELPSRLSPELVDFILTALSLDDSRRR-TVSDMLRHPWMAAHR 804
            TLA+K I+K+++   T L RV +EI  L    LRH  ++ +  V+H  K +YLVT+R G+DLF+FF  H +GVSEATA  +  KI+  V++ H  G CHRDLKPENILF   +       V + DFGLCA+V T               PL +FCGSPGFFAPEML+   YDG+ ADVWS+GCILLEL+LG+  F + WM AY  D L    HF+  +  +VAA+ R +           +L A+  +D+  R T+ D+  HPW   HR
Sbjct:  265 TLALKAINKSKLNDITALVRVHSEISALSDPALRHPSLLSVKHVIHTSKFIYLVTERGGKDLFDFFGPHDKGVSEATALRIAFKIVEAVKHMHMHGYCHRDLKPENILFTHDNYM-----VKIVDFGLCAKVGTT--------------PLTDFCGSPGFFAPEMLLHDQYDGQKADVWSIGCILLELLLGNTFFLKTWMTAYHLDVLGDRTHFDTLLHENVAAMHRAVADAAYSAHAKALLQAMLTEDAENRPTIYDVAEHPWFDGHR 514          
BLAST of mRNA_P-wetherbeei_contig708.1.1 vs. uniprot
Match: A0A067CEG6_SAPPC (CAMK/CAMKL protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CEG6_SAPPC)

HSP 1 Score: 218 bits (555), Expect = 3.460e-64
Identity = 127/271 (46.86%), Postives = 167/271 (61.62%), Query Frame = 1
Query:   10 LAVKMIHKAEVVSTTTLRRVDNEIRVLRR--LRHGGIMRLYDVVHAPKCVYLVTDRAGRDLFEFFDEHLEGVSEATAALLLHKIMMPVRYCHAMGVCHRDLKPENILFADTDPFTAASRVLLCDFGLCARVETDAEEAALRAAGRRTRPLGEFCGSPGFFAPEMLVRGSYDGKLADVWSLGCILLELVLGHEDFCRLWMGAYEYDKLKVPVHFEAAVAASVAALGREL---PSRL-SPELVDFILTALSLDDSRRRTVSDMLRHPWMAAHR 804
            LAVK+I KA+++    L+R+  EI  L    LRH  ++ L DV+H PK +YLVTDR G+DLFE+F  H  G+SEATA+ LL KI+  +R+ H  G CHRDLKPENILFA   P +A+ +++  DFGLC+RV          A GR+   L +FCGSPGFFAPE+L+  SYDG  ADVWSLGCILLEL+LG+  F  +WM AY  D L     +   + A++A L   L   P +L S  + + +L  L      R T+ D+  HP   A R
Sbjct:  188 LAVKVIEKAKLLDVLALQRIQMEIAALSDPLLRHPSVLFLRDVIHTPKYMYLVTDRGGKDLFEYFGAHENGISEATASPLLFKIVDAIRHLHTHGYCHRDLKPENILFA---PESASVKIV--DFGLCSRV----------ARGRKAF-LSDFCGSPGFFAPEILLAESYDGFKADVWSLGCILLELLLGNAFFLSVWMTAYSLDVLGDRALYRDTLHANLAKLREALDAPPMQLYSGPMKELLLLMLDASAKTRLTIQDVYEHPVFEAQR 442          
BLAST of mRNA_P-wetherbeei_contig708.1.1 vs. uniprot
Match: A0A485LLZ7_9STRA (Aste57867_23102 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLZ7_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.800e-63
Identity = 117/270 (43.33%), Postives = 159/270 (58.89%), Query Frame = 1
Query:   10 LAVKMIHKAEVVSTTTLRRVDNEIRVLR--RLRHGGIMRLYDVVHAPKCVYLVTDRAGRDLFEFFDEHLEGVSEATAALLLHKIMMPVRYCHAMGVCHRDLKPENILFADTDPFTAASRVLLCDFGLCARVETDAEEAALRAAGRRTRPLGEFCGSPGFFAPEMLVRGSYDGKLADVWSLGCILLELVLGHEDFCRLWMGAYEYDKLKVPVHFEAAVAASVAALGRELPSRL----SPELVDFILTALSLDDSRRRTVSDMLRHPWMAAH 801
            LAVK I K+++    +L RV +EI  LR   LRH  ++ + +V+H  K +YLVT+R G+DLF+FF  H  GVSEATA  +  KI+  V++ H    CHRDLKPENILF   +       + + DFGLCA+V T              + L +FCGSPGFFAPEML+  SYDG+ ADVWS+GCILLEL+LG+  F + WM AY+ D L    HF   + A++A   + L        SP++   ++  L  D   R T+  + +HPW  AH
Sbjct:  249 LAVKAIDKSKLHDIVSLFRVHSEIAALRDVHLRHPSLLSVREVIHTSKFIYLVTERGGKDLFDFFGPHEHGVSEATALRIAFKIVEAVKHLHGHDYCHRDLKPENILFTQDNYM-----IKIVDFGLCAKVGT--------------KVLTDFCGSPGFFAPEMLLHESYDGQKADVWSVGCILLELILGNTFFLQTWMTAYQLDVLSDRQHFHKLIQANIATTQQTLADAAIDAYSPKVKSLLVAMLCEDPRERPTIFQVAQHPWFEAH 499          
BLAST of mRNA_P-wetherbeei_contig708.1.1 vs. uniprot
Match: A0A7S3HK97_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK97_9STRA)

HSP 1 Score: 220 bits (560), Expect = 2.980e-63
Identity = 121/268 (45.15%), Postives = 159/268 (59.33%), Query Frame = 1
Query:    1 PGTLAVKMIHKAEVVSTTTLRRVDNEIRVLRRLRHGGIMRLYDVVHAPKCVYLVTDRAGRDLFEFFDEHLEGVSEATAALLLHKIMMPVRYCHAMGVCHRDLKPENILFADTDPFTAASR----VLLCDFGLCARVETDAEEAALRAAGRRTRPLGEFCGSPGFFAPEMLVRGSYDGKLADVWSLGCILLELVLGHEDFCRLWMGAYEYDKLKVPVHFEAAVAASVAALGRELPSRLSPELVDFILTALSLDDSRRRTVSDMLRHPWM 792
            P   A+K+I+K  + S T L RV  EI  L+ L++  I+ + DV+H    +Y+VT++ GRDLFEFFDEH +GV E  A  ++  +M  V +CH  G+CHRDLKPENIL +    F AAS     + LCDFGL  + +  A              L +FCGSPGFFAPEM++ GSY G  ADVWS GCILLELV GHE FC +WM AY+Y+ LK    F   +  ++  L   L    SPEL  FIL  L L  S+R + + +  H W+
Sbjct:  177 PKEYALKIINKDRITSFTALMRVSTEIDNLKLLKNPYIVSVNDVIHTETKLYIVTEKGGRDLFEFFDEHPDGVPEDWAKQIIACVMKGVMFCHDQGICHRDLKPENILVS----FDAASGRCIDLKLCDFGLSTKFKPKAL-------------LVDFCGSPGFFAPEMIIHGSYYGDKADVWSTGCILLELVAGHEKFCDVWMTAYDYEVLKDKEKFTDTINDTLDQLPEML--NFSPELNSFILKFLELSQSKRPSTAQLCSHAWL 425          
BLAST of mRNA_P-wetherbeei_contig708.1.1 vs. uniprot
Match: A0A1V9Y9P6_9STRA (Protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y9P6_9STRA)

HSP 1 Score: 210 bits (535), Expect = 4.440e-61
Identity = 119/264 (45.08%), Postives = 160/264 (60.61%), Query Frame = 1
Query:   10 LAVKMIHKAEVVSTTTLRRVDNEIRVLRR--LRHGGIMRLYDVVHAPKCVYLVTDRAGRDLFEFFDEHLEGVSEATAALLLHKIMMPVRYCHAMGVCHRDLKPENILFADTDPFTAASRVLLCDFGLCARVETDAEEAALRAAGRRTRPLGEFCGSPGFFAPEMLVRGSYDGKLADVWSLGCILLELVLGHEDFCRLWMGAYEYDKLKVPVHFEAAVAASVAALGREL--PSR--LSPELVDFILTALSLDDSRRRTVSDMLRH 783
            LAVK+I K+++   T L+RV  E+  L    LRH  ++ L DV+H PK +YL+TDR G+DLFE+   H  G+SEAT   LL KI+  +R+ HA G CHRDLKPENIL+A   P +A  +V+  DFGLC +V   +           ++ LG+FCGSPGFFAPE+L+  +YDG  ADVWSLGCILLELVLG+  F  +WM AY  D L     F   V  ++A +   L  PS    S  + D +L  L  +   R +++D+  H
Sbjct:  199 LAVKVIDKSKLTDATALQRVQMELTALTDPVLRHPSVLFLRDVIHTPKYLYLITDRGGKDLFEYIGPHENGISEATTTPLLFKIVDAIRHLHAHGYCHRDLKPENILYA---PESAGVKVV--DFGLCTKVSRGS-----------SKKLGDFCGSPGFFAPEILLHETYDGFKADVWSLGCILLELVLGNSFFLSIWMAAYHLDVLGDRSLFRQTVHQNLAKMAEALRGPSMQLYSDAIKDLLLCMLVENPKERLSIADVYDH 446          
BLAST of mRNA_P-wetherbeei_contig708.1.1 vs. uniprot
Match: A0A6G0XJF5_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJF5_9STRA)

HSP 1 Score: 211 bits (536), Expect = 8.560e-61
Identity = 120/274 (43.80%), Postives = 161/274 (58.76%), Query Frame = 1
Query:    1 PGTLAVKMIHKAEVVSTTTLRRVDNEIRVLR--RLRHGGIMRLYDVVHAPKCVYLVTDRAGRDLFEFFDEHLEGVSEATAALLLHKIMMPVRYCHAMGVCHRDLKPENILFADTDPFTAASRVLLCDFGLCARVETDAEEAALRAAGRRTRPLGEFCGSPGFFAPEMLVRGSYDGKLADVWSLGCILLELVLGHEDFCRLWMGAYEYDKLKVPVHFEAAVAASVAALGRELPSR---LSPELVDFILTALSLDDSRRRTVSDMLRHPWMAAHRL 807
            P  LAVK I K+++     L RV+ EI  L+  +LRH  ++ L DVVH PK +YL+T+R GRDLF+FF  H E + EA A  +  KI+  V++ H+   CHRDLKPENILF    P T    + L DFGLCA+V                 PL +FCGSPGFFAPEML++ +YDG+ +DVWS+GCILLELVLGH  F   WM AY+ + L     F   + +++AAL + L      +SP+    +   L  D   R T+ ++  HPW  A +L
Sbjct:  246 PTNLAVKAIDKSKLHDVLALVRVNGEIGALKDAKLRHASLLSLRDVVHTPKFIYLITERGGRDLFDFFGSH-ERIPEAMAVRISFKIVEAVKHMHSQEYCHRDLKPENILFT---PETFV--IKLVDFGLCAKVGA--------------APLTDFCGSPGFFAPEMLLQETYDGQKSDVWSVGCILLELVLGHTFFVETWMTAYQLEVLSDRQLFHKLIRSNIAALHQALNRADCLVSPKGKALLEAILCEDIQARPTIFEVAEHPWFEAQQL 499          
BLAST of mRNA_P-wetherbeei_contig708.1.1 vs. uniprot
Match: A0A329SH67_9STRA (Protein kinase domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SH67_9STRA)

HSP 1 Score: 202 bits (515), Expect = 8.760e-58
Identity = 116/267 (43.45%), Postives = 154/267 (57.68%), Query Frame = 1
Query:   10 LAVKMIHKAEVVSTTTLRRVDNEIRVLR--RLRHGGIMRLYDVVHAPKCVYLVTDRAGRDLFEFFDEHLEGVSEATAALLLHKIMMPVRYCHAMGVCHRDLKPENILFADTDPFTAASRVLLCDFGLCARVETDAEEAALRAAGRRTRPLGEFCGSPGFFAPEMLVRGSYDGKLADVWSLGCILLELVLGHEDFCRLWMGAYEYDKLKVPVHFEAAVAASVAALGREL---PS-RLSPELVDFILTALSLDDSRRRTVSDMLRHPWM 792
            LAVK I K +++   +L R+ +EI  L    +RH GI+ L DV+H  K VYLVT+R G+DLFEFF  H++G+ E T   LL  +   V   H    CHRDLKPEN+L+A      ++  V L DFGLC +V T                L +FCGSPGFFAPE+L+   YDG  ADVWS+GCILLELVLG+  F  +WM  YE   LK P  F   V A++  + R+L   P  + S +L   +L  L  + S R ++  +L HPW+
Sbjct:  216 LAVKAIDKQKLMDLVSLHRISSEITSLSDAAIRHPGILELVDVIHTHKHVYLVTERGGKDLFEFFGAHVDGLGEDTIRPLLLHLAQAVEVLHRNNYCHRDLKPENVLYAPE----SSHLVKLIDFGLCTKVTTQ---------------LHDFCGSPGFFAPELLLHDGYDGCKADVWSIGCILLELVLGNTLFSSIWMSMYEISILKEPKKFAECVKAALTQI-RDLCHGPEWKYSAKLRSALLGMLCENPSERLSIHQVLAHPWL 462          
BLAST of mRNA_P-wetherbeei_contig708.1.1 vs. uniprot
Match: A0A6A3E9P6_9STRA (Protein kinase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3E9P6_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.060e-57
Identity = 113/267 (42.32%), Postives = 155/267 (58.05%), Query Frame = 1
Query:   10 LAVKMIHKAEVVSTTTLRRVDNEIRVLR--RLRHGGIMRLYDVVHAPKCVYLVTDRAGRDLFEFFDEHLEGVSEATAALLLHKIMMPVRYCHAMGVCHRDLKPENILFADTDPFTAASRVLLCDFGLCARVETDAEEAALRAAGRRTRPLGEFCGSPGFFAPEMLVRGSYDGKLADVWSLGCILLELVLGHEDFCRLWMGAYEYDKLKVPVHFEAAVAASVAALGREL---PS-RLSPELVDFILTALSLDDSRRRTVSDMLRHPWM 792
            LA+K I K +++   +L R+ +EI  L    +RH GI+ L DV+H  K +YLVT+R G+DLFEFF  HL+GV+E     L   +   V   H    CHRDLKPEN+L++  D    A  + L DFGLC +  ++  +A           L +FCGSPGFFAPE+L+  SYDG  AD+WS+GCILLELVLG+  F  +WM  YE   LK P  F   V  ++A   R+    P  + S +L   +L  L  D S R +++ +L HPW+
Sbjct:  223 LAIKAIDKQKLIDLVSLHRISSEIASLSDPAIRHAGILELVDVIHTRKHIYLVTERGGKDLFEFFGAHLDGVTEDIIRPLFLHLAQAVEVLHRNNYCHRDLKPENVLYSPED----AHLIKLIDFGLCTKAVSEHGQA-----------LHDFCGSPGFFAPELLLHESYDGLKADIWSIGCILLELVLGNTLFSSIWMSMYELSILKEPKKFAECVKVALAQT-RDFCHGPKWKYSGKLRTVLLGMLCEDPSERFSINQVLDHPWL 473          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig708.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6B8_9STRA3.610e-10977.72Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A024TEC5_9STRA1.310e-6544.57CAMK/CAMKL protein kinase n=1 Tax=Aphanomyces inva... [more]
W4FSE8_9STRA1.540e-6444.61CAMK/CAMKL protein kinase n=1 Tax=Aphanomyces asta... [more]
A0A067CEG6_SAPPC3.460e-6446.86CAMK/CAMKL protein kinase n=2 Tax=Saprolegnia TaxI... [more]
A0A485LLZ7_9STRA1.800e-6343.33Aste57867_23102 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S3HK97_9STRA2.980e-6345.15Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A1V9Y9P6_9STRA4.440e-6145.08Protein kinase n=1 Tax=Achlya hypogyna TaxID=12027... [more]
A0A6G0XJF5_9STRA8.560e-6143.80Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A329SH67_9STRA8.760e-5843.45Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A6A3E9P6_9STRA1.060e-5742.32Protein kinase domain-containing protein n=3 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig708contigP-wetherbeei_contig708:547..2109 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog157072.XP_008879638.1
PFAMsPkinase
Model size816
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.47e-63
EggNOG OGsKOG4717@1|root,KOG4717@2759|Eukaryota
Descriptionprotein kinase activity
Cds size795
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186956.6090643-CDS-P-wetherbeei_contig708:546..7921683186956.6090643-CDS-P-wetherbeei_contig708:546..792Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig708 547..792 -
1683186956.6182318-CDS-P-wetherbeei_contig708:1002..13031683186956.6182318-CDS-P-wetherbeei_contig708:1002..1303Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig708 1003..1303 -
1683186956.6262417-CDS-P-wetherbeei_contig708:1586..17091683186956.6262417-CDS-P-wetherbeei_contig708:1586..1709Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig708 1587..1709 -
1683186956.6342113-CDS-P-wetherbeei_contig708:1963..20881683186956.6342113-CDS-P-wetherbeei_contig708:1963..2088Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig708 1964..2088 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186956.6492834-UTR-P-wetherbeei_contig708:2088..21091683186956.6492834-UTR-P-wetherbeei_contig708:2088..2109Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig708 2089..2109 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig708.1.1prot_P-wetherbeei_contig708.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig708 547..2088 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig708.1.1

>prot_P-wetherbeei_contig708.1.1 ID=prot_P-wetherbeei_contig708.1.1|Name=mRNA_P-wetherbeei_contig708.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=265bp
MIHKAEVVSTTTLRRVDNEIRVLRRLRHGGIMRLYDVVHAPKCVYLVTDR
AGRDLFEFFDEHLEGVSEATAALLLHKIMMPVRYCHAMGVCHRDLKPENI
LFADTDPFTAASRVLLCDFGLCARVETDAEEAALRAAGRRTRPLGEFCGS
PGFFAPEMLVRGSYDGKLADVWSLGCILLELVLGHEDFCRLWMGAYEYDK
LKVPVHFEAAVAASVAALGRELPSRLSPELVDFILTALSLDDSRRRTVSD
MLRHPWMAAHRLAPT
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mRNA from alignment at P-wetherbeei_contig708:547..2109-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig708.1.1 ID=mRNA_P-wetherbeei_contig708.1.1|Name=mRNA_P-wetherbeei_contig708.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1563bp|location=Sequence derived from alignment at P-wetherbeei_contig708:547..2109- (Phaeothamnion wetherbeei SAG_119_79)
CCGGGAACCCTGGCGGTGAAGATGATTCACAAAGCCGAGGTGGTGAGCAC GACGACGCTGCGGCGTGTCGACAATGAGATCCGCGTGTTGCGGCGGCTGC GCCACGGCGGCATCATGCGCCTCTACGACGTCGTCCACGCCCCCAAGTGA GCCGCCGTGCCGCCGCGCCCGCGGGTCTTTTTTTCGTTTGTGTTCATTTG CGTGAGGTGGAGTTGGGGGTGCAAAATTGGCCCATTGCGTTCTGGCATGA AAATTGCCGAGCTCGCTAATCACTAAAACGCTTGTTGAGAGAAAGCGCGC GGCGCTGCCCCTTCGCTCCGTGTTCTCGGAGCCGCCTTTTGGCATTTTCA GAGACAAACAAACAATTGACCCCACCCTTTTAACCTGCATCTGCCGACAG GTGCGTGTACCTCGTGACGGACAGGGCGGGACGGGACCTGTTCGAGTTCT TCGACGAGCACCTCGAGGGCGTTTCGGAGGCGACGGCGGCGCTCCTCCTC CACAAGATTATGATGCCCGTCAGGTCAGTCAGCCGGCTGCGTTGTTGTCT CTGTGGTTGCTGCTGGTTGCGACGGGCGAGAGCTTCTTCCTAATCGTGGC ATTGGCCTCCCAAGCGCCGGCAGGTGGCGGCGGCGGGCGGTTTCATGCCT TTCTCCTTTGAAGTGTCGCCATACGGCAAAGTGGAACATAAATCGCAGCA TCCGCGTTTTCTCGCTTTCAAACGAACTCGCCGCGCGATCGCAAAATTTT GCCATGCCGGCACCTTCTGCCGCTCCCGGGCCGTTTTCTTCTTACCGCTG CTGCAGGTACTGCCATGCCATGGGCGTCTGCCACCGGGACCTCAAGCCCG AGAACATCCTCTTCGCCGACACGGACCCCTTCACCGCCGCCAGCCGCGTC CTCCTCTGTGATTTTGGCCTCTGCGCCCGCGTCGAGACCGACGCCGAGGA AGCCGCGCTGCGCGCCGCCGGCCGGCGGACGCGGCCGCTCGGCGAGTTCT GCGGGTCGCCGGGATTCTTCGCGCCAGAGATGCTGGTGCGCGGGTCGTAC GATGGCAAGCTGGCGGACGTGTGGTCGCTGGGCTGTATCCTCCTGGAGCT CGTGCTGGTACGTTTAGTCGTGAATGAGCGAAATCGTCCCTGGCAGTGTC TCAGTCTTCCATCTGTTTTTAACTGCTACTATAAATCGATTCCCCAGGTT ATGTTGCTCGTTTACGGCGGAGCTAGATTCCTGGTTCGATTCTGTGCTTC CGAGGTTCATTTGGCTCGAGAAACTTTAGCCTGTTTCCTCCGCCTTCTTT TCTCGAAATTGTCTCAGGGCCACGAGGACTTCTGCCGGCTGTGGATGGGT GCCTACGAATACGACAAGCTCAAGGTACCGGTGCACTTCGAGGCTGCCGT CGCCGCCAGCGTCGCTGCGCTCGGGCGGGAGCTTCCCAGTCGACTGTCGC CCGAGCTGGTGGACTTTATCCTGACGGCGCTCAGCCTGGACGATTCGCGG CGGCGAACTGTGTCGGACATGCTGCGGCACCCGTGGATGGCAGCGCACAG GCTGGCGCCGACC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig708:547..2109-

>mRNA_P-wetherbeei_contig708.1.1 ID=mRNA_P-wetherbeei_contig708.1.1|Name=mRNA_P-wetherbeei_contig708.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=795bp|location=Sequence derived from alignment at P-wetherbeei_contig708:547..2109- (Phaeothamnion wetherbeei SAG_119_79)
ATGATTCACAAAGCCGAGGTGGTGAGCACGACGACGCTGCGGCGTGTCGA
CAATGAGATCCGCGTGTTGCGGCGGCTGCGCCACGGCGGCATCATGCGCC
TCTACGACGTCGTCCACGCCCCCAAGTGCGTGTACCTCGTGACGGACAGG
GCGGGACGGGACCTGTTCGAGTTCTTCGACGAGCACCTCGAGGGCGTTTC
GGAGGCGACGGCGGCGCTCCTCCTCCACAAGATTATGATGCCCGTCAGGT
ACTGCCATGCCATGGGCGTCTGCCACCGGGACCTCAAGCCCGAGAACATC
CTCTTCGCCGACACGGACCCCTTCACCGCCGCCAGCCGCGTCCTCCTCTG
TGATTTTGGCCTCTGCGCCCGCGTCGAGACCGACGCCGAGGAAGCCGCGC
TGCGCGCCGCCGGCCGGCGGACGCGGCCGCTCGGCGAGTTCTGCGGGTCG
CCGGGATTCTTCGCGCCAGAGATGCTGGTGCGCGGGTCGTACGATGGCAA
GCTGGCGGACGTGTGGTCGCTGGGCTGTATCCTCCTGGAGCTCGTGCTGG
GCCACGAGGACTTCTGCCGGCTGTGGATGGGTGCCTACGAATACGACAAG
CTCAAGGTACCGGTGCACTTCGAGGCTGCCGTCGCCGCCAGCGTCGCTGC
GCTCGGGCGGGAGCTTCCCAGTCGACTGTCGCCCGAGCTGGTGGACTTTA
TCCTGACGGCGCTCAGCCTGGACGATTCGCGGCGGCGAACTGTGTCGGAC
ATGCTGCGGCACCCGTGGATGGCAGCGCACAGGCTGGCGCCGACC
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