mRNA_P-wetherbeei_contig7074.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7074.2.1
Unique NamemRNA_P-wetherbeei_contig7074.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7074.2.1 vs. uniprot
Match: A0A6H5JI30_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI30_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.220e-46
Identity = 83/163 (50.92%), Postives = 110/163 (67.48%), Query Frame = 1
Query:    1 EGDDNDFILLPEELGLPPMPKRFVQAELGDHAKGVARFKRTLAWREEQKTDSVLRLPHPRFDFIKRCYSTSFHLPDKQGRLVYFERPGTIQWAKLTAVGISVDELIRHYMYCMEFLWQELLPRQTDTVSIVVDLEGMRLMDVRGDVSAFMKATINMMSRHYPQ 489
            E  DN F   P    L PMP RF+ AE  D AK  AR++ TL WR+E + D++L  PHP+F  IK  Y+  FHLPDK GR+ Y+ERPG    A+L  +GI+  EL+ HY+YCMEFLW+ L PRQ+  ++IV+DL G+R  D+ G+  AF+K ++ MMSRHYPQ
Sbjct: 1344 EDIDNLFYPPPSGSSLAPMPHRFLLAESMDVAKAWARWEATLDWRKETEADTILDRPHPKFALIKSKYAHCFHLPDKDGRVTYYERPGMSDIAELKRLGITKSELLDHYVYCMEFLWKVLQPRQSQRITIVIDLAGVRFRDLVGESLAFLKTSVGMMSRHYPQ 1506          
BLAST of mRNA_P-wetherbeei_contig7074.2.1 vs. uniprot
Match: A0A7S3XQ11_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ11_HETAK)

HSP 1 Score: 147 bits (370), Expect = 1.070e-40
Identity = 68/150 (45.33%), Postives = 100/150 (66.67%), Query Frame = 1
Query:   40 LGLPPMPKRFVQAELGDHAKGVARFKRTLAWREEQKTDSVLRLPHPRFDFIKRCYSTSFHLPDKQGRLVYFERPGTIQWAKLTAVGISVDELIRHYMYCMEFLWQELLPRQTDTVSIVVDLEGMRLMDVRGDVSAFMKATINMMSRHYPQ 489
            LG   +P+ FV+AE G+ A  + R+++TL WR E   D +L  PH +FD  K+CY  SF+  D++G +VY E+ G +    +   G+S+D+L+RHYMY ME+LW  L P + D ++ V+DLEG+RL D  G+V+AF+K+ I M S HYPQ
Sbjct:   26 LGEGDVPQLFVEAEFGNRAAALDRYRKTLLWRWEVGADRILDEPHLKFDIFKKCYPHSFYGRDREGNVVYIEQAGRVDVEGMRRHGLSLDDLLRHYMYNMEYLWGRLSPGKADRMTAVLDLEGVRLRDFAGEVAAFVKSAIGMNSTHYPQ 175          
BLAST of mRNA_P-wetherbeei_contig7074.2.1 vs. uniprot
Match: A0A8K1CNM5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNM5_PYTOL)

HSP 1 Score: 130 bits (326), Expect = 6.250e-32
Identity = 64/164 (39.02%), Postives = 92/164 (56.10%), Query Frame = 1
Query:    1 EGDDNDFILLPEELGLP-PMPKRFVQAELGDHAKGVARFKRTLAWREEQKTDSVLRLPHPRFDFIKRCYSTSFHLPDKQGRLVYFERPGTIQWAKLTAVGISVDELIRHYMYCMEFLWQELLPRQTDTVSIVVDLEGMRLMDVRGDVSAFMKATINMMSRHYPQ 489
            E D+ D   L +  G P P   RF+ AE GD  KG  R++ TL WR+E   D +L  PHP F+ IK+ Y   FH   K G  +Y+E+PG I    L   G+S+++L+RHYMY  E+LW+ + P  T     V+D+ G+ + D+ G+V  F+K        HYP+
Sbjct:  468 ESDNGDIAYLKQISGGPLPFSHRFIAAEKGDEEKGRQRYENTLQWRKENDIDDILIRPHPTFETIKKYYPQFFHGRSKAGLPIYYEQPGKINLPALKKEGLSIEDLLRHYMYITEYLWRVIEPSDTGRSVTVLDVSGIGMSDLGGEVLDFIKRASAFTGAHYPE 631          
BLAST of mRNA_P-wetherbeei_contig7074.2.1 vs. uniprot
Match: A0A4D9D3L4_9STRA (CRAL-TRIO domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3L4_9STRA)

HSP 1 Score: 130 bits (326), Expect = 7.370e-32
Identity = 63/153 (41.18%), Postives = 90/153 (58.82%), Query Frame = 1
Query:   28 LPEELGLPPMPKRFVQAELGDHAKGVARFKRTLAWREEQKTDSVLRLPHPRFDFIKRCYSTSFHLPDKQGRLVYFERPGTIQWAKLTAVGISVDELIRHYMYCMEFLWQELLPRQTDTVSIVVDLEGMRLMDVRGDVSAFMKATINMMSRHYP 486
            LP    +PP    F++AE GD  K  AR+ RT AWR   + D +L  PHP+F  IKR Y  +FH  DK+G + ++E  G +Q  +L   G+S+ +L  H +   EFLW  L P Q+D V++V+DL+G+ L DV G+V    K  + + S HYP
Sbjct:  848 LPSPASVPPT---FLEAEKGDEVKARARWARTQAWRASHQVDQILAQPHPKFSLIKRHYPQAFHFRDKEGHVCFYELLGRLQVGELLRQGVSLSDLTEHVILQQEFLWGVLQPEQSDRVTLVLDLKGVSLADVTGEVVNVAKMAVGLTSTHYP 997          
BLAST of mRNA_P-wetherbeei_contig7074.2.1 vs. uniprot
Match: A0A5D6YF42_9STRA (Threonine ammonia-lyase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YF42_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.010e-31
Identity = 67/162 (41.36%), Postives = 92/162 (56.79%), Query Frame = 1
Query:    4 GDDNDFILLPEELGLPPMPKRFVQAELGDHAKGVARFKRTLAWREEQKTDSVLRLPHPRFDFIKRCYSTSFHLPDKQGRLVYFERPGTIQWAKLTAVGISVDELIRHYMYCMEFLWQELLPRQTDTVSIVVDLEGMRLMDVRGDVSAFMKATINMMSRHYPQ 489
            GDD D  +    L   P   RFV AE GD  KG  R+  TL WR+E + D++L  PHP F  IK+ Y   FH   K G+ VY+ERPG I  A L   G+S+++L+RHYMY  E+LW+ + P  T     V+D+ G+ + D+ G+V  F+K        HYP+
Sbjct:  476 GDDADAKISGGPL---PFSARFVAAEKGDEEKGRQRYVNTLQWRKENRIDNILVTPHPTFATIKQHYPQFFHGRSKAGQPVYYERPGKIDLAALKREGLSIEDLLRHYMYITEYLWRVIEPSDTGRSLTVLDVSGIGMYDLGGEVLDFIKRASAFTGAHYPE 634          
BLAST of mRNA_P-wetherbeei_contig7074.2.1 vs. uniprot
Match: T0S085_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S085_SAPDV)

HSP 1 Score: 129 bits (324), Expect = 1.140e-31
Identity = 64/151 (42.38%), Postives = 87/151 (57.62%), Query Frame = 1
Query:   37 ELGLPPMPKRFVQAELGDHAKGVARFKRTLAWREEQKTDSVLRLPHPRFDFIKRCYSTSFHLPDKQGRLVYFERPGTIQWAKLTAVGISVDELIRHYMYCMEFLWQELLPRQTDTVSIVVDLEGMRLMDVRGDVSAFMKATINMMSRHYPQ 489
            EL   P   RF+ AE GD AKG AR++ TL WR E   D +L    P F  IK+CY   FH   K G  VY+E+ G I   +L + G+S+D+L+RHYMY  E+LW  L P  T     V+D EG+   D+ G+V  F++  +  +S HYP+
Sbjct:  471 ELAFSP---RFLAAEKGDEAKGRARYEATLQWRRENHVDGILYEVQPHFHLIKQCYPQYFHGRSKNGNCVYYEKLGKIDLKRLKSAGLSLDQLLRHYMYITEYLWLILEPSDTGRTISVLDAEGVGFYDLTGEVMEFVRRAMAFVSAHYPE 618          
BLAST of mRNA_P-wetherbeei_contig7074.2.1 vs. uniprot
Match: K3X232_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X232_GLOUD)

HSP 1 Score: 129 bits (323), Expect = 1.670e-31
Identity = 60/146 (41.10%), Postives = 87/146 (59.59%), Query Frame = 1
Query:   52 PMPKRFVQAELGDHAKGVARFKRTLAWREEQKTDSVLRLPHPRFDFIKRCYSTSFHLPDKQGRLVYFERPGTIQWAKLTAVGISVDELIRHYMYCMEFLWQELLPRQTDTVSIVVDLEGMRLMDVRGDVSAFMKATINMMSRHYPQ 489
            P   RF+ AE GD  KG  R++ TL WR+E   D++L  PHP F+ IK+ Y   FH   K G+ VY+ERPG I  A L   G+S+++L+RHYMY  E+LW+ + P        V+D+ G+ + D+ G+V  F+K   +    HYP+
Sbjct:  512 PFSARFIAAEKGDEEKGRQRYQNTLQWRKENDIDNILVTPHPTFETIKKYYPQYFHGRSKAGQPVYYERPGKIDLAALKREGLSIEDLLRHYMYITEYLWRVIEPSDMGRSLTVLDVTGIGMYDLGGEVLDFIKRASSFTGAHYPE 657          
BLAST of mRNA_P-wetherbeei_contig7074.2.1 vs. uniprot
Match: A0A225WCR7_9STRA (SEC14 cytosolic factor n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WCR7_9STRA)

HSP 1 Score: 127 bits (318), Expect = 7.530e-31
Identity = 60/142 (42.25%), Postives = 86/142 (60.56%), Query Frame = 1
Query:   64 RFVQAELGDHAKGVARFKRTLAWREEQKTDSVLRLPHPRFDFIKRCYSTSFHLPDKQGRLVYFERPGTIQWAKLTAVGISVDELIRHYMYCMEFLWQELLPRQTDTVSIVVDLEGMRLMDVRGDVSAFMKATINMMSRHYPQ 489
            RF+  E GD  KG ARF  TL WR+E   D++L  PHP F+ IK+ Y   FH   ++G+ VY+ERPG IQ   L   G+S+D+L+RHYMY  E+LW+ + P  +     V+D+ G+ + D+ G+V  F+K        HYP+
Sbjct:  484 RFIAGEKGDAEKGHARFLATLEWRKENDIDNILVTPHPNFETIKQYYPQYFHGRTREGQPVYYERPGKIQLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPE 625          
BLAST of mRNA_P-wetherbeei_contig7074.2.1 vs. uniprot
Match: A0A0P1ALM7_PLAHL (Sec14 cytosolic n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ALM7_PLAHL)

HSP 1 Score: 126 bits (317), Expect = 8.840e-31
Identity = 59/142 (41.55%), Postives = 82/142 (57.75%), Query Frame = 1
Query:   64 RFVQAELGDHAKGVARFKRTLAWREEQKTDSVLRLPHPRFDFIKRCYSTSFHLPDKQGRLVYFERPGTIQWAKLTAVGISVDELIRHYMYCMEFLWQELLPRQTDTVSIVVDLEGMRLMDVRGDVSAFMKATINMMSRHYPQ 489
            RF+  E GD  KG AR+  TL WR+E   D++L  PHP F+ IKR Y   FH   + G  VY+ERPG I    L   G+S+D+L+RHYMY  E+LW+ + P        V+D+ G+ + D+ G+V  F+K        HYP+
Sbjct:  416 RFIAGEKGDEEKGRARYLATLKWRKENNIDNILVTPHPNFEIIKRSYPQYFHGRTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDLGRSITVLDVSGIGMYDLGGEVLDFIKRASAFTGEHYPE 557          
BLAST of mRNA_P-wetherbeei_contig7074.2.1 vs. uniprot
Match: A0A024FT24_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FT24_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.610e-30
Identity = 58/142 (40.85%), Postives = 85/142 (59.86%), Query Frame = 1
Query:   64 RFVQAELGDHAKGVARFKRTLAWREEQKTDSVLRLPHPRFDFIKRCYSTSFHLPDKQGRLVYFERPGTIQWAKLTAVGISVDELIRHYMYCMEFLWQELLPRQTDTVSIVVDLEGMRLMDVRGDVSAFMKATINMMSRHYPQ 489
            RF+ AE G+  KG  R+ +T+AWR+E + D +LR PH  FD IK+CY   FH   K G  VY+E+PG I    L  +G+S+++LI HYMY  EFLW  + P        V+D+ G+ +  + G+V  F+K   +  + HYP+
Sbjct:  455 RFIAAEKGNEEKGKERYLQTVAWRKEHELDQILRKPHHNFDKIKKCYPQYFHGRSKAGNPVYYEKPGKIDLVALKQLGLSIEDLIYHYMYITEFLWTYIEPEDAARSITVLDVSGIGMSSLGGEVLDFIKRASSFTAAHYPE 596          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7074.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JI30_9PHAE1.220e-4650.92CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S3XQ11_HETAK1.070e-4045.33Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8K1CNM5_PYTOL6.250e-3239.02Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9D3L4_9STRA7.370e-3241.18CRAL-TRIO domain-containing protein n=2 Tax=Monodo... [more]
A0A5D6YF42_9STRA1.010e-3141.36Threonine ammonia-lyase n=1 Tax=Pythium brassicum ... [more]
T0S085_SAPDV1.140e-3142.38Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
K3X232_GLOUD1.670e-3141.10Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A225WCR7_9STRA7.530e-3142.25SEC14 cytosolic factor n=1 Tax=Phytophthora megaka... [more]
A0A0P1ALM7_PLAHL8.840e-3141.55Sec14 cytosolic n=1 Tax=Plasmopara halstedii TaxID... [more]
A0A024FT24_9STRA1.610e-3040.85Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7074contigP-wetherbeei_contig7074:1830..3080 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog115417.EPrPW00000014609
PFAMsCRAL_TRIO
Model size498
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons3
Evalue7.84e-33
EggNOG OGsKOG1471@1|root,KOG1471@2759|Eukaryota,1MDQ7@121069|Pythiales
DescriptionDomain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
Cds size498
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186956.3657753-CDS-P-wetherbeei_contig7074:1829..21581683186956.3657753-CDS-P-wetherbeei_contig7074:1829..2158Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7074 1830..2158 +
1683186956.3757937-CDS-P-wetherbeei_contig7074:2554..26781683186956.3757937-CDS-P-wetherbeei_contig7074:2554..2678Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7074 2555..2678 +
1683186956.3865292-CDS-P-wetherbeei_contig7074:3035..30801683186956.3865292-CDS-P-wetherbeei_contig7074:3035..3080Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7074 3036..3080 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7074.2.1prot_P-wetherbeei_contig7074.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7074 1830..3080 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7074.2.1

>prot_P-wetherbeei_contig7074.2.1 ID=prot_P-wetherbeei_contig7074.2.1|Name=mRNA_P-wetherbeei_contig7074.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
EGDDNDFILLPEELGLPPMPKRFVQAELGDHAKGVARFKRTLAWREEQKT
DSVLRLPHPRFDFIKRCYSTSFHLPDKQGRLVYFERPGTIQWAKLTAVGI
SVDELIRHYMYCMEFLWQELLPRQTDTVSIVVDLEGMRLMDVRGDVSAFM
KATINMMSRHYPQVC*
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mRNA from alignment at P-wetherbeei_contig7074:1830..3080+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7074.2.1 ID=mRNA_P-wetherbeei_contig7074.2.1|Name=mRNA_P-wetherbeei_contig7074.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1251bp|location=Sequence derived from alignment at P-wetherbeei_contig7074:1830..3080+ (Phaeothamnion wetherbeei SAG_119_79)
GAGGGAGACGACAACGATTTTATACTGCTGCCCGAGGAGCTGGGTCTTCC GCCGATGCCCAAGCGCTTCGTCCAGGCAGAACTGGGGGACCATGCCAAAG GGGTTGCGCGTTTCAAGCGGACGCTGGCGTGGAGAGAAGAGCAAAAGACG GATTCTGTCCTGCGACTACCGCACCCGCGCTTTGATTTCATCAAGCGTTG CTACTCGACTAGCTTTCACTTGCCCGACAAGCAAGGAAGGCTAGTTTACT TCGAGCGGCCGGGCACGATCCAATGGGCTAAGCTCACCGCAGTGGGGATC AGCGTTGATGAGTTGATTCGTCACTACATGTGAGTGGTGAAGTCTCGTTG GAGCATGTTCTTGAATATTTTGCTGCATATTGCTCTTGGACAAAGCAAAT TTAGAACGGAGTTTAGAACGAGATGCCTCTAAAGCGTTGCCCGTGAACCC TTCCCTGCACGAGCTCTCTATCTAGCGCTGGCTAGTTTATGTGTCCTTTT CGCAGTGAAATTAAAATAGTGTGGTAGGCGTACGTGCGTGGAAAGCGGCA AGCCTAGGGCCGCTGTGCTATCTCCTCCTTCCAATCAATTCTCGTGAACC AGACACCTCAGGAAAGAGAGCTCGTCAGTTTAAGCTAATGTACCATCGAA CCGGTTTCTTCTCCCCACACTGCTCTTGTTATCACCCCTCTATCATCGTT GCCGTCGTCGCTACGGCTGCTGCAGGTACTGCATGGAGTTCCTGTGGCAG GAGTTGCTGCCGCGGCAGACGGACACGGTGTCCATCGTGGTGGACCTCGA GGGGATGCGATTGATGGACGTCCGCGGCGACGTCTCCGCCTTCATGAAGG TCCGTCCGTCCGTCCCGTCCGTTCGCATCGCGCTTGGCTTCTCATCTCAT TTTCTATTAATGGTGCCGGAAGAGTTTAGGAATGGGGTGGGCGTGGTCCA TATATGGGGTTTGACTTTTCCTTTATCTCTGAGAAGCAGGGCTGAAACTG GGGTTAGAAGATCGTTGGGCGTTTGTCTACATCTTCTTGCCAACGCCGTC GCCGTCGCCGCTTCGCATTCTTTCTGCAAGCCGAAAGGTCTGCTTCCTCT CACGATGGGGAGCGAACAGCGAATCGCATGCGCCGGTTGCCCTCTGCGTG TCTTGCGCTGCGATTCCCCCTGCCACGACGCACTCCTCGATTCCCATTAA AAACAGGCCACCATCAACATGATGTCCCGGCACTATCCACAGGTGTGCTG A
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7074:1830..3080+

>mRNA_P-wetherbeei_contig7074.2.1 ID=mRNA_P-wetherbeei_contig7074.2.1|Name=mRNA_P-wetherbeei_contig7074.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig7074:1830..3080+ (Phaeothamnion wetherbeei SAG_119_79)
GAGGGAGACGACAACGATTTTATACTGCTGCCCGAGGAGCTGGGTCTTCC
GCCGATGCCCAAGCGCTTCGTCCAGGCAGAACTGGGGGACCATGCCAAAG
GGGTTGCGCGTTTCAAGCGGACGCTGGCGTGGAGAGAAGAGCAAAAGACG
GATTCTGTCCTGCGACTACCGCACCCGCGCTTTGATTTCATCAAGCGTTG
CTACTCGACTAGCTTTCACTTGCCCGACAAGCAAGGAAGGCTAGTTTACT
TCGAGCGGCCGGGCACGATCCAATGGGCTAAGCTCACCGCAGTGGGGATC
AGCGTTGATGAGTTGATTCGTCACTACATGTACTGCATGGAGTTCCTGTG
GCAGGAGTTGCTGCCGCGGCAGACGGACACGGTGTCCATCGTGGTGGACC
TCGAGGGGATGCGATTGATGGACGTCCGCGGCGACGTCTCCGCCTTCATG
AAGGCCACCATCAACATGATGTCCCGGCACTATCCACAGGTGTGCTGA
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