mRNA_P-wetherbeei_contig707.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig707.4.1
Unique NamemRNA_P-wetherbeei_contig707.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig707.4.1 vs. uniprot
Match: A0A836CJS3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS3_9STRA)

HSP 1 Score: 389 bits (998), Expect = 1.400e-124
Identity = 192/258 (74.42%), Postives = 221/258 (85.66%), Query Frame = 1
Query:    4 VVSKAHNRVLLKDVSGQILGGLLAVMGPSGSGKSTLLNALALRLDRGVTTEGEVRLNGRPYANSELKLMSGYVMQDDVLNGNLTVEETLTYTARLRCPQDTDAASRKLRVDRVISQMGLEKARHVIVGSPLKKGISGGERKRLCVAIELLTEPSLLFLDEPTSGLDSVTALSLCQSLQRLTDRCTIICTIHQPQGKIFALFDNLMLLKSGDIAYQGPASEAVAFFEESGFPCPPFTNPADHLLDSITIGRSDSSHSLV 777
            V +K   +VLLK +SGQI GG  A MGPSGSGKSTLLN LALRLD  V+  G++RLNGR Y N++LK MSGYVMQDD+ NGNLT EETLTYTARLRCPQD +AA RK+RVD V+ Q+GLE ARH  VG+PL+KGISGGERKRL VA ELL EP LLFLDEPT+GLDSVTALSLC +L++++D CT+ICTIHQPQ KIFALFDNL+LLKSGDIAYQGPA E++AFFE++GFPCPP TNPADHLLDSI++ RSDSSHSL 
Sbjct:   64 VTAKTRKQVLLKGLSGQIKGGFWACMGPSGSGKSTLLNTLALRLDPAVSVVGDLRLNGRAYDNAQLKRMSGYVMQDDLFNGNLTCEETLTYTARLRCPQDANAAQRKVRVDGVLRQVGLEHARHTPVGTPLRKGISGGERKRLAVAQELLVEPQLLFLDEPTTGLDSVTALSLCHTLRKISDTCTVICTIHQPQSKIFALFDNLILLKSGDIAYQGPAKESLAFFEKTGFPCPPLTNPADHLLDSISLTRSDSSHSLT 321          
BLAST of mRNA_P-wetherbeei_contig707.4.1 vs. uniprot
Match: A0A835ZBW7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW7_9STRA)

HSP 1 Score: 384 bits (986), Expect = 1.620e-122
Identity = 190/269 (70.63%), Postives = 225/269 (83.64%), Query Frame = 1
Query:    1 QVVSKAHNRVLLKDVSGQILGGLLAVMGPSGSGKSTLLNALALRLDRGVTTEGEVRLNGRPYANSELKLMSGYVMQDDVLNGNLTVEETLTYTARLRCPQDTDAASRKLRVDRVISQMGLEKARHVIVGSPLKKGISGGERKRLCVAIELLTEPSLLFLDEPTSGLDSVTALSLCQSLQRLTDRCTIICTIHQPQGKIFALFDNLMLLKSGDIAYQGPASEAVAFFEESGFPCPPFTNPADHLLDSITIGRSDSSHSLV---VSGQREI 798
            +VV+KA  ++LLK +SGQI GG  A MGPSGSGKSTLLN LALRLD GV   G++RLNGRP +N++LK MSGYVMQDD+ NGNLT EE LTYTARLRCPQDT AA RK RVD V+ Q+GLE ARH  VG+PLKKGISGGERKRL VA ELL EP LLFLDEPT+GLDSVTALSLC +L++++D C++ICTIHQPQ KIFALFDNL+LLK+GDIAYQGPA +A+ FFE +G PCPP TNPADHLLD +++ RS+SSHSL    ++ +RE+
Sbjct:   85 EVVAKARKQLLLKGISGQIRGGFWACMGPSGSGKSTLLNTLALRLDPGVKVTGDLRLNGRPCSNAQLKRMSGYVMQDDLFNGNLTCEEQLTYTARLRCPQDTSAAQRKARVDGVLRQVGLEHARHTSVGTPLKKGISGGERKRLAVAQELLVEPQLLFLDEPTTGLDSVTALSLCHTLRKISDACSVICTIHQPQSKIFALFDNLILLKAGDIAYQGPAKQALPFFESTGHPCPPLTNPADHLLDVVSLTRSESSHSLADVDLAAEREL 353          
BLAST of mRNA_P-wetherbeei_contig707.4.1 vs. uniprot
Match: A0A835YR02_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR02_9STRA)

HSP 1 Score: 374 bits (959), Expect = 3.720e-118
Identity = 190/290 (65.52%), Postives = 222/290 (76.55%), Query Frame = 1
Query:    4 VVSKAHNRVLLKDVSGQILGGLLAVMGPSGSGKSTLLNALALRLDRGVTTEGEVRLNGRPYANSELKLMSGYVMQDDVLNGNLTVEETLTYTARLRCPQDTDAASRKLRVDRVISQMGLEKARHVIVGSPLKKGISGGERKRLCVAIELLTEPSLLFLDEPTSGLDSVTALSLCQSLQRLTDRCTIICTIHQPQGKIFALFDNLMLLKSGDIAYQGPASEAVAFFEESGFPCP--------------------------------PFTNPADHLLDSITIGRSDSSHSLV 777
            V +KA N+VLLK +SGQ+ GG  A MGPSGSGKSTLLN LALRLDR V+  G++RLNGR Y N+ELK MSGYVMQDD+LNGNLT EETL YTARLRCPQD   A RK+RVDRV+ QMGLE ARH IVG+PL+KGISGGERKRL V +ELL EP LLFLDEPTSGLDSVTAL LC  L+ +++ CT++CTIHQPQ KI++LFDNL+LLK+GDIAYQGPA EA+AFFE++G+PCP                                P TNPADHLLDSI++ R+DSSHSL+
Sbjct:   66 VTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREISETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLM 355          
BLAST of mRNA_P-wetherbeei_contig707.4.1 vs. uniprot
Match: D8TMA3_VOLCA (ABC transporter domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TMA3_VOLCA)

HSP 1 Score: 338 bits (868), Expect = 1.620e-105
Identity = 171/265 (64.53%), Postives = 204/265 (76.98%), Query Frame = 1
Query:    4 VVSKAHNRVLLKDVSGQILGGLLAVMGPSGSGKSTLLNALALRLDRGVTTEGEVRLNGRPYANSELKLMSGYVMQDDVLNGNLTVEETLTYTARLRCPQDTDAASRKLRVDRVISQMGLEKARHVIVGSPLKKGISGGERKRLCVAIELLTEPSLLFLDEPTSGLDSVTALSLCQSLQRL--TDRCTIICTIHQPQGKIFALFDNLMLLKSGDIAYQGPASEAVAFFEESGFPCPPFTNPADHLLDSITIGRSDSSHSLVVSGQR 792
            V ++   R LL  V+G+I  G  A+MGPSGSGKSTLLNAL+ RLDRGV+  GE++LNG+PY ++ELKLMSGYVMQDD+LN +LTVEETL YTA LR P+ T    R  RV+ V+ Q+GL   R V+VGSPLKKGISGGERKRLCVA+ELLT+P LLFLDEPTSGLDSVTALSLC+ L+RL  +  CT++CTIHQPQ KIF LFD L+LL  G I YQGPA  A+ FF+ SGFPCP + NPADH LD IT   +DS  SLV   ++
Sbjct:   43 VTARRQKRPLLNQVTGKITSGFYAIMGPSGSGKSTLLNALSCRLDRGVSMSGELKLNGQPYGSTELKLMSGYVMQDDLLNAHLTVEETLRYTAELRMPRTTTPEERMARVEEVMQQVGLSHVRSVVVGSPLKKGISGGERKRLCVAMELLTKPKLLFLDEPTSGLDSVTALSLCKLLRRLAASRTCTVVCTIHQPQAKIFNLFDQLLLLNRGTIVYQGPAQGALDFFDRSGFPCPAYENPADHFLDVITPSMNDSVESLVEKEEK 307          
BLAST of mRNA_P-wetherbeei_contig707.4.1 vs. uniprot
Match: A0A8J4CN86_9CHLO (ABC transporter domain-containing protein n=8 Tax=Volvox TaxID=3066 RepID=A0A8J4CN86_9CHLO)

HSP 1 Score: 334 bits (857), Expect = 6.600e-104
Identity = 172/260 (66.15%), Postives = 201/260 (77.31%), Query Frame = 1
Query:    4 VVSKAHNRVLLKDVSGQILGGLLAVMGPSGSGKSTLLNALALRLDRGVTTEGEVRLNGRPYANSELKLMSGYVMQDDVLNGNLTVEETLTYTARLRCPQDTDAASRKLRVDRVISQMGLEKARHVIVGSPLKKGISGGERKRLCVAIELLTEPSLLFLDEPTSGLDSVTALSLCQSLQRL-TDR-CTIICTIHQPQGKIFALFDNLMLLKSGDIAYQGPASEAVAFFEESGFPCPPFTNPADHLLDSITIGRSDSSHSLV 777
            V ++ H R LL  V+G+I  G  A+MGPSGSGKSTLLN L+ RLDRGVT  GE++LNG+ Y+N+ELKL+SGYVMQDD+LN +LTVEETL YTA LR P+ +    R  RV+ V+ Q+GL   R VIVGSP+KKGISGGERKRLCVA+ELLT P LLFLDEPTSGLDSVTALSLC+ L+RL T R CT++CTIHQPQ KIF LFD L+LL  G+I YQGPA  A+ FF  SGFPCP F NPADH LD IT   +DS  S V
Sbjct:   40 VTARRHMRPLLNGVTGKITAGFYAIMGPSGSGKSTLLNTLSCRLDRGVTVAGELKLNGQLYSNAELKLLSGYVMQDDLLNAHLTVEETLRYTAELRMPRGSTPEERMARVEEVMQQVGLTHVRSVIVGSPIKKGISGGERKRLCVAMELLTRPKLLFLDEPTSGLDSVTALSLCRLLRRLATSRTCTVVCTIHQPQAKIFNLFDQLLLLNRGNIVYQGPAQGALEFFGRSGFPCPAFENPADHFLDVITPNMNDSVESFV 299          
BLAST of mRNA_P-wetherbeei_contig707.4.1 vs. uniprot
Match: A0A150GN10_GONPE (ABC transporter domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GN10_GONPE)

HSP 1 Score: 334 bits (856), Expect = 1.590e-103
Identity = 169/260 (65.00%), Postives = 201/260 (77.31%), Query Frame = 1
Query:    4 VVSKAHNRVLLKDVSGQILGGLLAVMGPSGSGKSTLLNALALRLDRGVTTEGEVRLNGRPYANSELKLMSGYVMQDDVLNGNLTVEETLTYTARLRCPQDTDAASRKLRVDRVISQMGLEKARHVIVGSPLKKGISGGERKRLCVAIELLTEPSLLFLDEPTSGLDSVTALSLCQSLQRLTDR--CTIICTIHQPQGKIFALFDNLMLLKSGDIAYQGPASEAVAFFEESGFPCPPFTNPADHLLDSITIGRSDSSHSLV 777
            V ++   R LL  V+G+I+GG  A+MGPSGSGKSTLLN LA RLD GV+  GE++LNG  Y+N+ELK MSGYVMQDD+LN +LTV ETL+YTA LR P+ +    R  RV  V+ Q+GL   R VIVGSP+KKGISGGERKRLCVA+ELLT+P+LLFLDEPTSGLDSVTALSLC+ L+RL     CT++CTIHQPQ KIFALFD L+LL  G+I YQGPA  A+ FF+ SGFPCP + NPADH LD IT   +DS  SLV
Sbjct:   57 VTARRAKRPLLNGVTGKIVGGFYAIMGPSGSGKSTLLNTLACRLDHGVSISGELKLNGNEYSNAELKKMSGYVMQDDLLNAHLTVHETLSYTAELRMPRTSTPEERAQRVQEVMGQVGLSHVRDVIVGSPMKKGISGGERKRLCVAMELLTKPALLFLDEPTSGLDSVTALSLCRLLRRLASSKTCTVVCTIHQPQAKIFALFDQLLLLNRGNIVYQGPAQGALDFFDRSGFPCPAYENPADHFLDVITPNMNDSVESLV 316          
BLAST of mRNA_P-wetherbeei_contig707.4.1 vs. uniprot
Match: A0A835WTF6_9CHLO (ABC transporter domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WTF6_9CHLO)

HSP 1 Score: 330 bits (846), Expect = 4.020e-102
Identity = 169/261 (64.75%), Postives = 201/261 (77.01%), Query Frame = 1
Query:    4 VVSKAHNRVLLKDVSGQILGGLLAVMGPSGSGKSTLLNALALRLDRGVTTEGEVRLNGRPYANSELKLMSGYVMQDDVLNGNLTVEETLTYTARLRCPQDTDAASRKLRVDRVISQMGLEKARHVIVGSPLKKGISGGERKRLCVAIELLTEPSLLFLDEPTSGLDSVTALSLCQSLQRL--TDRCTIICTIHQPQGKIFALFDNLMLLKSGDIAYQGPASEAVAFFEESGFPCPPFTNPADHLLDSITIGRSDSSHSLVV 780
            V S+   R LL +V+G I  G  A+MGPSGSGKSTLLN L+ RLDRGVT EGE++LNG+ Y+N+ELK +SGYVMQDD+LN +LTVEETL YTA LR P+ T    R+ RV+ V++ +GL   R VIVGSP+KKGISGGERKRLCVA+ELLT+P LLFLDEPTSGLDSVTALSLC+ L+RL  +  CT++ TIHQPQ KIF LFD L+LL  G I YQGPA +A+ FF+ SGFPCP   NPADH LD IT   +DS  SLV 
Sbjct:   54 VTSRKVKRPLLNNVTGAITDGFYAIMGPSGSGKSTLLNTLSCRLDRGVTVEGELKLNGQEYSNAELKKLSGYVMQDDLLNAHLTVEETLRYTAELRMPRTTTPEERQERVETVMNSVGLSHVRDVIVGSPMKKGISGGERKRLCVAMELLTKPKLLFLDEPTSGLDSVTALSLCRLLRRLAMSRTCTVVTTIHQPQAKIFNLFDQLLLLNRGSIVYQGPAQDALDFFDRSGFPCPMHENPADHFLDVITPNHNDSVESLVA 314          
BLAST of mRNA_P-wetherbeei_contig707.4.1 vs. uniprot
Match: A0A836C0Y5_9CHLO (ABC transporter domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C0Y5_9CHLO)

HSP 1 Score: 327 bits (837), Expect = 9.400e-101
Identity = 165/260 (63.46%), Postives = 198/260 (76.15%), Query Frame = 1
Query:    4 VVSKAHNRVLLKDVSGQILGGLLAVMGPSGSGKSTLLNALALRLDRGVTTEGEVRLNGRPYANSELKLMSGYVMQDDVLNGNLTVEETLTYTARLRCPQDTDAASRKLRVDRVISQMGLEKARHVIVGSPLKKGISGGERKRLCVAIELLTEPSLLFLDEPTSGLDSVTALSLCQSLQRLTDR--CTIICTIHQPQGKIFALFDNLMLLKSGDIAYQGPASEAVAFFEESGFPCPPFTNPADHLLDSITIGRSDSSHSLV 777
            V +KA +R LL  V+G+I  G  A+MGPSGSGK+TLLN LA RLDRGV   G++RLNG  Y N+ELK M+GYVMQDD+LN +LTVEETL YTA LR P+ T    R  R++  +SQ+G+   R VIVGSP++KGISGGERKRLCVA+ELLT+P+LLFLDEPTSGLDSVTALSLC+ L+RL     CT++CTIHQPQ KIF LFDNL+LL  G I YQGPA  A+ FF+ SGFPCP   NPADH+LD IT   ++S   L 
Sbjct:   57 VQAKAMSRPLLNSVTGKITSGFYAIMGPSGSGKTTLLNTLAFRLDRGVAVSGDLRLNGMEYTNAELKRMAGYVMQDDLLNAHLTVEETLRYTAELRMPRTTSPRERLERIEGAMSQVGISHVRDVIVGSPMQKGISGGERKRLCVAMELLTKPALLFLDEPTSGLDSVTALSLCRLLRRLASARACTVVCTIHQPQAKIFNLFDNLLLLNRGSIVYQGPAGGALDFFDRSGFPCPQHENPADHILDVITPTMTESMEDLA 316          
BLAST of mRNA_P-wetherbeei_contig707.4.1 vs. uniprot
Match: A0A2K3DJM4_CHLRE (ABC transporter domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DJM4_CHLRE)

HSP 1 Score: 325 bits (832), Expect = 5.450e-100
Identity = 168/261 (64.37%), Postives = 198/261 (75.86%), Query Frame = 1
Query:    4 VVSKAHNRVLLKDVSGQILGGLLAVMGPSGSGKSTLLNALALRLDRGVTTEGEVRLNGRPYANSELKLMSGYVMQDDVLNGNLTVEETLTYTARLRCPQDTDAASRKLRVDRVISQMGLEKARHVIVGSPLKKGISGGERKRLCVAIELLTEPSLLFLDEPTSGLDSVTALSLCQSLQRL--TDRCTIICTIHQPQGKIFALFDNLMLLKSGDIAYQGPASEAVAFFEESGFPCPPFTNPADHLLDSITIGRSDSSHSLVV 780
            V S+   R LL +V+G I  G  A+MGPSGSGKSTLLNALA RLD GV  EGE++LNG+ Y+++ELK +SGYVMQDD+LN +LTVEETL YTA LR P+ T    R+ RV  V+ Q+GL   R+VIVGSP+KKGISGGERKRLCVA+ELLT P LLFLDEPTSGLDSVTALSLC+ L+RL  T  CT++ TIHQPQ KIF LFD L+LL  G I YQGPA +A+ FF+ SGFPCP   NPA+H LD IT   +DS  SL  
Sbjct:   59 VTSRKTQRALLSNVAGAITDGFYAIMGPSGSGKSTLLNALACRLDHGVKLEGELKLNGQNYSHAELKKVSGYVMQDDLLNAHLTVEETLRYTAELRLPRTTTPEERQERVQTVMEQVGLAHVRNVIVGSPMKKGISGGERKRLCVAMELLTRPKLLFLDEPTSGLDSVTALSLCRLLRRLAMTRTCTVVTTIHQPQAKIFHLFDQLLLLNRGTIVYQGPAQDALDFFDRSGFPCPAHENPANHFLDVITPNLNDSVESLTA 319          
BLAST of mRNA_P-wetherbeei_contig707.4.1 vs. uniprot
Match: A0A2J7ZUP2_9CHLO (ATP-binding cassette sub-family G member 2 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZUP2_9CHLO)

HSP 1 Score: 323 bits (827), Expect = 2.310e-99
Identity = 168/260 (64.62%), Postives = 200/260 (76.92%), Query Frame = 1
Query:    4 VVSKAHNRVLLKDVSGQILGGLLAVMGPSGSGKSTLLNALALRLDRGVTTEGEVRLNGRPYANSELKLMSGYVMQDDVLNGNLTVEETLTYTARLRCPQDTDAASRKLRVDRVISQMGLEKARHVIVGSPLKKGISGGERKRLCVAIELLTEPSLLFLDEPTSGLDSVTALSLCQSLQRL-TDR-CTIICTIHQPQGKIFALFDNLMLLKSGDIAYQGPASEAVAFFEESGFPCPPFTNPADHLLDSITIGRSDSSHSLV 777
            V +    R LL  V+G+I  G  A+MGPSGSGKSTLLN LALRLDR ++  GE++LNG+ Y+N+ELK +SGYVMQDD+LN +LTVEETL YTA LR P+ T    R+ RV  V+ Q+GL     VIVGSPL+KGISGGERKRLCVA+ELLT+P LLFLDEPTSGLDSVTALSLC+ L+RL T R CT++CTIHQPQ KIF LFD+L+LL  G I YQGPA +A+ FF+ SGFPCP   NPADH +D IT   +DS  SLV
Sbjct:   49 VTATRIKRPLLNSVTGKITTGYYAIMGPSGSGKSTLLNTLALRLDRNMSVSGELKLNGQDYSNAELKKISGYVMQDDLLNAHLTVEETLGYTAELRMPRTTTVEERRARVKEVMEQVGLTHVSAVIVGSPLRKGISGGERKRLCVAMELLTKPLLLFLDEPTSGLDSVTALSLCKLLKRLATGRTCTVVCTIHQPQAKIFNLFDHLLLLNRGTIMYQGPAPQALGFFDRSGFPCPLHENPADHFMDVITPNMNDSVESLV 308          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig707.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJS3_9STRA1.400e-12474.42P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835ZBW7_9STRA1.620e-12270.63P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835YR02_9STRA3.720e-11865.52P-loop containing nucleoside triphosphate hydrolas... [more]
D8TMA3_VOLCA1.620e-10564.53ABC transporter domain-containing protein n=1 Tax=... [more]
A0A8J4CN86_9CHLO6.600e-10466.15ABC transporter domain-containing protein n=8 Tax=... [more]
A0A150GN10_GONPE1.590e-10365.00ABC transporter domain-containing protein n=1 Tax=... [more]
A0A835WTF6_9CHLO4.020e-10264.75ABC transporter domain-containing protein n=3 Tax=... [more]
A0A836C0Y5_9CHLO9.400e-10163.46ABC transporter domain-containing protein n=1 Tax=... [more]
A0A2K3DJM4_CHLRE5.450e-10064.37ABC transporter domain-containing protein n=2 Tax=... [more]
A0A2J7ZUP2_9CHLO2.310e-9964.62ATP-binding cassette sub-family G member 2 n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig707contigP-wetherbeei_contig707:5065..8641 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog3067.XP_002947559.1
PFAMsABC2_membrane,ABC_tran
Model size1676
Max annot lvl3041|Chlorophyta
KEGG koko:K05681,ko:K21396
KEGG TC3.A.1.204
KEGG Pathwayko01523,ko02010,ko04976,map01523,map02010,map04976
Hectar predicted targeting categoryother localisation
Exons8
Evalue7.77e-104
EggNOG OGsCOG1131@1|root,KOG0061@2759|Eukaryota,37YH9@33090|Viridiplantae,34J9N@3041|Chlorophyta
DescriptionABC-2 type transporter
Cds size867
COG categoryQ
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig707.4.1prot_P-wetherbeei_contig707.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig707 5143..6917 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186955.9954479-UTR-P-wetherbeei_contig707:5064..51421683186955.9954479-UTR-P-wetherbeei_contig707:5064..5142Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig707 5065..5142 +
1683186956.047037-UTR-P-wetherbeei_contig707:6917..72741683186956.047037-UTR-P-wetherbeei_contig707:6917..7274Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig707 6918..7274 +
1683186956.0596008-UTR-P-wetherbeei_contig707:7624..77691683186956.0596008-UTR-P-wetherbeei_contig707:7624..7769Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig707 7625..7769 +
1683186956.0681171-UTR-P-wetherbeei_contig707:7957..79971683186956.0681171-UTR-P-wetherbeei_contig707:7957..7997Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig707 7958..7997 +
1683186956.0771759-UTR-P-wetherbeei_contig707:8197..82701683186956.0771759-UTR-P-wetherbeei_contig707:8197..8270Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig707 8198..8270 +
1683186956.0874598-UTR-P-wetherbeei_contig707:8525..86411683186956.0874598-UTR-P-wetherbeei_contig707:8525..8641Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig707 8526..8641 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186956.0072026-CDS-P-wetherbeei_contig707:5142..51551683186956.0072026-CDS-P-wetherbeei_contig707:5142..5155Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig707 5143..5155 +
1683186956.0173917-CDS-P-wetherbeei_contig707:5462..57221683186956.0173917-CDS-P-wetherbeei_contig707:5462..5722Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig707 5463..5722 +
1683186956.0275905-CDS-P-wetherbeei_contig707:6044..63561683186956.0275905-CDS-P-wetherbeei_contig707:6044..6356Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig707 6045..6356 +
1683186956.0371835-CDS-P-wetherbeei_contig707:6635..69171683186956.0371835-CDS-P-wetherbeei_contig707:6635..6917Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig707 6636..6917 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig707.4.1

>prot_P-wetherbeei_contig707.4.1 ID=prot_P-wetherbeei_contig707.4.1|Name=mRNA_P-wetherbeei_contig707.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=289bp
MGPSGSGKSTLLNALALRLDRGVTTEGEVRLNGRPYANSELKLMSGYVMQ
DDVLNGNLTVEETLTYTARLRCPQDTDAASRKLRVDRVISQMGLEKARHV
IVGSPLKKGISGGERKRLCVAIELLTEPSLLFLDEPTSGLDSVTALSLCQ
SLQRLTDRCTIICTIHQPQGKIFALFDNLMLLKSGDIAYQGPASEAVAFF
EESGFPCPPFTNPADHLLDSITIGRSDSSHSLVVSGQREIWKEETPEKKR
FRGSGQFSLSLSFSFSLSVLCSCCLKPSGDICPSGVDM*
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mRNA from alignment at P-wetherbeei_contig707:5065..8641+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig707.4.1 ID=mRNA_P-wetherbeei_contig707.4.1|Name=mRNA_P-wetherbeei_contig707.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3577bp|location=Sequence derived from alignment at P-wetherbeei_contig707:5065..8641+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGGTCTCGAAGGCCCACAACCGGGTCCTCCTGAAGGATGTCAGTGG CCAGATTCTGGGCGGACTCCTTGCTGTTATGGGCCCAAGCGGTGAGGCTA GTCAATGAGGAAATTTGGAATTGAGAGGGCCAATTTGACAACTGCCTTGG CTGGGAGGTTCTGGCGCTTTTTACCCGGTGGCCCGGAGAAAGGCCCTTCG TCTGCACGTCGCCCTTGCATGCCGTGCGGCAGTGCCGCCCTGCCTGCTGA ACGCGATGCGTTTCCCGATGCGCCTGTCGAAGGCGCTTCGCCAAAACAGT TGCTGAACAGATCCCCTTCCTCCAGGAAACCGAAATGAACCAAACCTCCC ATTTCCCCACCGCTTGACTCTGCTTCGAAATGCGAGAACAAACGCCAGGC TCGGGCAAGTCAACGCTGCTCAATGCGCTGGCGCTTCGGCTCGACCGTGG CGTCACGACTGAGGGCGAAGTCCGCCTCAATGGCCGCCCCTACGCCAATT CGGAACTCAAGCTCATGTCCGGCTACGTCATGCAGGACGACGTGCTGAAC GGCAACCTCACGGTGGAGGAGACGCTCACCTACACGGCGCGCCTCCGGTG TCCGCAGGACACCGACGCCGCCTCCCGCAAGCTCCGCGTTGACCGCGTCA TCTCCCAGGTAAATTAGTGACAGTGACAGCGCAGCGTATGGCGCGGCGTC CGTCTTTTTGTGCGCCGAAGGGTTGCCGTAAGTGCCGTTGCCGCCGTCGC GACCGTCTTTGCCGTTGTTGCTGATTCCCCTTGCAACTGGTGCTGCCGCT TCTTTGGGGGGCGGTTGTAACCCAACTTCTCTGCCTCTCGTTCTTCCTCT TCCCTTCTTGCGGCCCGCTCTGATATCGCGAGACCTCGCCCGCCCCGCCC GTCCTTTCGCCGCCATGTTCCTTCCTCCCTTGCCTCTTTATGTTTATCCT TCCTACGTCGTCCCTGCCGTCTCCCGGCAGATGGGCCTAGAGAAGGCGCG CCACGTCATCGTCGGCTCGCCGCTCAAGAAGGGCATCTCGGGCGGCGAGC GCAAGCGACTGTGCGTCGCCATCGAGCTGCTGACGGAGCCCAGCCTGCTT TTCCTGGACGAGCCGACCTCGGGCCTCGACTCCGTCACGGCGCTCTCGCT CTGCCAGTCGCTGCAGCGGCTGACGGACCGGTGTACAATTATCTGCACAA TCCACCAGCCGCAGGGCAAGATATTCGCGCTCTTCGACAATCTCATGCTG CTCAAGTCGGGCGACATCGCCTACCAGGGACCGGCCTCCGAAGTGAGTTG TTTTTACAGTTGCAGCAGTTACGCTGGCTCTTTCGTCGTTCCATTGTCCA GATCCGTTCTCCAGATCACCCTTAATGAAAGGGGCCCGCACTCCGGGTAG CGCGGGCGAGAGAAGCTTCAGGGACAATCTCAAGTGCGGTAGCGGTGGCT GGCAACTCTCCCAATCGTTCTTTTGTTCCGTGCCTCTCAACTAAGCGTCC AAACGGACGCCCACGACCCGCCAAACCGAATCCCGAATCTGCCGAATTTG CCGAACCTGCGCACATATCAGGCCGTGGCGTTCTTTGAGGAGTCCGGCTT CCCATGCCCGCCCTTCACCAACCCGGCCGACCACCTCCTCGACTCTATCA CCATCGGCCGCTCCGACTCGTCTCACTCCCTCGTGGTGAGTGGCCAGAGA GAGATATGGAAGGAAGAAACGCCTGAAAAGAAGAGGTTTCGAGGAAGTGG TCAATTCTCGTTGTCTCTCTCTTTCTCCTTTTCACTTTCGGTCCTCTGCA GCTGCTGCTTGAAGCCCTCGGGCGACATTTGTCCTTCCGGCGTTGATATG TAATCGCCGTCGCCGTCCGCCGTTGTTTTCTCCATTGCACTCCCGGCCCG TCGCCACCACTGTCGCCTGCCACTACGGCGCAAAAACAACACCGCAAACA CAACGACGACACGAAACGGTGAAAACAGGACATGGACAACGAGAGAATAG ACCGGCCTCGCCACCACTCGTTTGACCTCCATTTCGGCCATGACCATGGC GAGCTCCAGCTGCGCGACATCACGCCGTGGTTCACGCAGTTCGTCATTTT GATGGATCGCTGCTTCAAGGAGATCTTCCGCAAGCGCGAGGTGCTCTACA CTCAGCTGGCACAGACGACGGTCATGGCCGTCCTCGTCGGCACGGCCTTC CTACAGGTGCGTATGTTATTCTGTTCTTGAACACTTCTTGGAAACTTGCC GGTGGTGTTTTCTTATTCCGATTGCTGCGCTGTGTGTGAAACAAACGCGT TCCGTTTCTTGATAGACGTCTTCCTAGTTAAAAAGTGCTTCCTTCGCACT GTGTTGGCGCTTTTCCATTTTGGCGGTTATTTTTGTTTGAACGCAGCTTG TGGGATGGTGCAAATGCTTTCGGTCATGGCGCACTATAAATCTTCCCCTG GAATCTTGCTACCGCTGCCACTGCCGCTCGCCGCATCGCTCGCATCATCG CTCTTGTTTGCGCACACCAAAATCGACTCAAAAACGTCGAAAACTAAACA AACCAGATAGGGGACGACCAGGAGAGCGTGACACGGCGACAGCCGGTGCT GTTCTTCTGCGTCATCAACCAAGGCCTCTTCGGCGCCCTGACCACCATCA ACAGCTTTCCCGGCGAGCGCATGCTGGCGCTGCGTGAGCGGGCGGCCGGC ACCTAGTGAGTGTCTTCACTTCCTCGCGGGCGAGGCGAGCAGGAGAATTG GGGAGAGGAGCGGCTAAGCCAGTGTTCGCATTCATTTGAATTGTGAGCTG GCCTGCCCTCCCCTTGTGTATGTCCTCTGCCCCCGTGACTAACTTCTGCT CTTTCTGCCTTCCTTGTACGCTTCTATGCCGGCCCGCTCGCAGCTTCGCA TCGGCCTACTTCTGCGCCAAGGTGCTATCCGAGGTAAAAAGGGGATCTCG TCTTCTTTCTTCGGGCCCGTGGCATGTGCTGTTACCCCACTTTTGCTGCT TGTTACCGTCCAGTGCCACCGCGCGTCTATCCGTTCTTCGGGTCGTTGCG AAAATGATCTGCTTTGCTGACCCTCACTTTTCCGCCTCCCATCTCTCCTC CTGCCGCCCCTGCGACCGTTACTGCCATGCCAGACCCTGACGCAGCTGAT CCTGCCGGTCATCTTCTCGGTGATCGTCTACTTCCTCGTCGGCCTTCGCC CGAGCAGTGAGTCGTTGGCGAAAGGCAGACACGGCTGTTCATGGATTCGT TAAGTTCAACCATGCCATTCGATCTGGTTCTGTCTAGCATTACGCACGCA TCTCTGCTGCAGCACAACCTGCGCTCTTATTCGATAAAATGCCGCCTCCG CCCCTTCCGCCATTCCTCCTACTCCAGCTTTTCTTTTTCACCCTTGCCTG CTCACAACTGTCCTTTTCTCGTTCTTGGGGGGTCAAAACCGCTCTTTTCA CGTCTTCGCAGCATCGCACTTCTTCATTTTCGTGACGTTCATGTCGCTCT GCTCGCTGGCGGCGACATCCCTTGCTCTCATGGTCTCCGCCTTCTGCCGG ACGACTGACCTGTCGGTCACCGTCCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig707:5065..8641+

>mRNA_P-wetherbeei_contig707.4.1 ID=mRNA_P-wetherbeei_contig707.4.1|Name=mRNA_P-wetherbeei_contig707.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig707:5065..8641+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCCCAAGCGGCTCGGGCAAGTCAACGCTGCTCAATGCGCTGGCGCT
TCGGCTCGACCGTGGCGTCACGACTGAGGGCGAAGTCCGCCTCAATGGCC
GCCCCTACGCCAATTCGGAACTCAAGCTCATGTCCGGCTACGTCATGCAG
GACGACGTGCTGAACGGCAACCTCACGGTGGAGGAGACGCTCACCTACAC
GGCGCGCCTCCGGTGTCCGCAGGACACCGACGCCGCCTCCCGCAAGCTCC
GCGTTGACCGCGTCATCTCCCAGATGGGCCTAGAGAAGGCGCGCCACGTC
ATCGTCGGCTCGCCGCTCAAGAAGGGCATCTCGGGCGGCGAGCGCAAGCG
ACTGTGCGTCGCCATCGAGCTGCTGACGGAGCCCAGCCTGCTTTTCCTGG
ACGAGCCGACCTCGGGCCTCGACTCCGTCACGGCGCTCTCGCTCTGCCAG
TCGCTGCAGCGGCTGACGGACCGGTGTACAATTATCTGCACAATCCACCA
GCCGCAGGGCAAGATATTCGCGCTCTTCGACAATCTCATGCTGCTCAAGT
CGGGCGACATCGCCTACCAGGGACCGGCCTCCGAAGCCGTGGCGTTCTTT
GAGGAGTCCGGCTTCCCATGCCCGCCCTTCACCAACCCGGCCGACCACCT
CCTCGACTCTATCACCATCGGCCGCTCCGACTCGTCTCACTCCCTCGTGG
TGAGTGGCCAGAGAGAGATATGGAAGGAAGAAACGCCTGAAAAGAAGAGG
TTTCGAGGAAGTGGTCAATTCTCGTTGTCTCTCTCTTTCTCCTTTTCACT
TTCGGTCCTCTGCAGCTGCTGCTTGAAGCCCTCGGGCGACATTTGTCCTT
CCGGCGTTGATATGTAA
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