mRNA_P-wetherbeei_contig7068.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7068.1.1
Unique NamemRNA_P-wetherbeei_contig7068.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7068.1.1 vs. uniprot
Match: A0A812TDU3_SYMMI (FUOM protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TDU3_SYMMI)

HSP 1 Score: 71.2 bits (173), Expect = 1.390e-14
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 1 
Query:    1 MPLIGVPESITPELLYALARMGHGDAVVIADANFPSDSVA 120
            MPL G+P SIT ELLYALARMGHGD++VIADANFPSDSVA
Sbjct:    1 MPLKGIPASITSELLYALARMGHGDSIVIADANFPSDSVA 40
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BLAST of mRNA_P-wetherbeei_contig7068.1.1 vs. uniprot
Match: A0A482RVU7_9ARCH (Fucose isomerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVU7_9ARCH)

HSP 1 Score: 67.8 bits (164), Expect = 3.140e-13
Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 1 
Query:    1 MPLIGVPESITPELLYALARMGHGDAVVIADANFPSDSVA 120
            MPL GVP+ I+PELLYALA+MGHGD +VIAD NFPSDSVA
Sbjct:    1 MPLRGVPDVISPELLYALAKMGHGDQLVIADGNFPSDSVA 40
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BLAST of mRNA_P-wetherbeei_contig7068.1.1 vs. uniprot
Match: A0A814U4P9_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814U4P9_ADIRI)

HSP 1 Score: 67.4 bits (163), Expect = 5.810e-13
Identity = 29/40 (72.50%), Postives = 37/40 (92.50%), Query Frame = 1 
Query:    1 MPLIGVPESITPELLYALARMGHGDAVVIADANFPSDSVA 120
            MPL G+P++I+PELLYALA MGHGD +V+AD+NFPSDS+A
Sbjct:    1 MPLKGIPQTISPELLYALASMGHGDEIVLADSNFPSDSIA 40
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BLAST of mRNA_P-wetherbeei_contig7068.1.1 vs. uniprot
Match: A0A819J2R9_9BILA (Hypothetical protein (Fragment) n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A819J2R9_9BILA)

HSP 1 Score: 63.9 bits (154), Expect = 6.200e-12
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:    1 MPLIGVPESITPELLYALARMGHGDAVVIADANFPSDSVA 120
            MPL G+P  I+PELLYALA MGHGD +V+AD+NFPS+S+A
Sbjct:    1 MPLKGIPHLISPELLYALASMGHGDEIVLADSNFPSESIA 40
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BLAST of mRNA_P-wetherbeei_contig7068.1.1 vs. uniprot
Match: A0A814IZ11_9BILA (Hypothetical protein n=3 Tax=Adineta steineri TaxID=433720 RepID=A0A814IZ11_9BILA)

HSP 1 Score: 64.7 bits (156), Expect = 6.470e-12
Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = 1 
Query:    1 MPLIGVPESITPELLYALARMGHGDAVVIADANFPSDSVA 120
            MPL G+P+ I+PELLYALA MGHGD +V+AD+NFPS+S+A
Sbjct:    1 MPLKGIPQLISPELLYALASMGHGDEIVLADSNFPSESIA 40
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BLAST of mRNA_P-wetherbeei_contig7068.1.1 vs. uniprot
Match: A0A818MND6_9BILA (Hypothetical protein n=5 Tax=Rotaria TaxID=231623 RepID=A0A818MND6_9BILA)

HSP 1 Score: 63.9 bits (154), Expect = 1.220e-11
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:    1 MPLIGVPESITPELLYALARMGHGDAVVIADANFPSDSVA 120
            MPL G+P  I+PELLYALA MGHGD +V+AD+NFPS+S+A
Sbjct:    1 MPLKGIPHLISPELLYALASMGHGDEIVLADSNFPSESIA 40
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BLAST of mRNA_P-wetherbeei_contig7068.1.1 vs. uniprot
Match: A0A816BBT2_9BILA (Hypothetical protein n=6 Tax=Rotaria TaxID=231623 RepID=A0A816BBT2_9BILA)

HSP 1 Score: 63.9 bits (154), Expect = 1.310e-11
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:    1 MPLIGVPESITPELLYALARMGHGDAVVIADANFPSDSVA 120
            MPL G+P  I+PELLYALA MGHGD +V+AD+NFPS+S+A
Sbjct:    1 MPLKGIPHLISPELLYALASMGHGDEIVLADSNFPSESIA 40
[Close]
BLAST of mRNA_P-wetherbeei_contig7068.1.1 vs. uniprot
Match: A0A814U8P7_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A814U8P7_9BILA)

HSP 1 Score: 63.9 bits (154), Expect = 8.070e-11
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:    1 MPLIGVPESITPELLYALARMGHGDAVVIADANFPSDSVA 120
            MPL G+P  I+PELLYALA MGHGD +V+AD+NFPS+S+A
Sbjct:    1 MPLKGIPHLISPELLYALASMGHGDEIVLADSNFPSESIA 40
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BLAST of mRNA_P-wetherbeei_contig7068.1.1 vs. uniprot
Match: A0A4W6DQP2_LATCA (Fucose mutarotase n=14 Tax=Percomorphaceae TaxID=1489872 RepID=A0A4W6DQP2_LATCA)

HSP 1 Score: 60.5 bits (145), Expect = 2.580e-10
Identity = 26/39 (66.67%), Postives = 34/39 (87.18%), Query Frame = 1 
Query:    7 LIGVPESITPELLYALARMGHGDAVVIADANFPSDSVAA 123
            LIG+P  ++PELLYALA+MGHGD +V+ADANFP+ S+ A
Sbjct:    4 LIGIPSVLSPELLYALAKMGHGDELVLADANFPASSICA 42
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BLAST of mRNA_P-wetherbeei_contig7068.1.1 vs. uniprot
Match: A0A8C9WL26_SCLFO (Fucose mutarotase n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9WL26_SCLFO)

HSP 1 Score: 60.5 bits (145), Expect = 2.580e-10
Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    7 LIGVPESITPELLYALARMGHGDAVVIADANFPSDSV 117
            L G+P +I+PELLYALARMGHGD +V ADANFPS S+
Sbjct:    4 LRGIPSAISPELLYALARMGHGDELVFADANFPSSSI 40
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7068.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812TDU3_SYMMI1.390e-1485.00FUOM protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A482RVU7_9ARCH3.140e-1380.00Fucose isomerase n=1 Tax=archaeon TaxID=1906665 Re... [more]
A0A814U4P9_ADIRI5.810e-1372.50Hypothetical protein n=2 Tax=Adineta ricciae TaxID... [more]
A0A819J2R9_9BILA6.200e-1270.00Hypothetical protein (Fragment) n=1 Tax=Rotaria sp... [more]
A0A814IZ11_9BILA6.470e-1270.00Hypothetical protein n=3 Tax=Adineta steineri TaxI... [more]
A0A818MND6_9BILA1.220e-1170.00Hypothetical protein n=5 Tax=Rotaria TaxID=231623 ... [more]
A0A816BBT2_9BILA1.310e-1170.00Hypothetical protein n=6 Tax=Rotaria TaxID=231623 ... [more]
A0A814U8P7_9BILA8.070e-1170.00Hypothetical protein n=1 Tax=Rotaria sordida TaxID... [more]
A0A4W6DQP2_LATCA2.580e-1066.67Fucose mutarotase n=14 Tax=Percomorphaceae TaxID=1... [more]
A0A8C9WL26_SCLFO2.580e-1072.97Fucose mutarotase n=1 Tax=Scleropages formosus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7068contigP-wetherbeei_contig7068:135..257 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog34839.XP_005402121.1
Preferred nameFUOM
PFAMsRbsD_FucU
Model size123
Max annot lvl33208|Metazoa
KEGG rclassRC00563
KEGG koko:K02431
KEGG ReactionR10764
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000003,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006004,GO:0007275,GO:0007399,GO:0007610,GO:0007617,GO:0007618,GO:0008150,GO:0008152,GO:0009987,GO:0010721,GO:0016853,GO:0016854,GO:0016857,GO:0019098,GO:0019318,GO:0019953,GO:0022008,GO:0022414,GO:0030154,GO:0030246,GO:0032501,GO:0032502,GO:0032504,GO:0036065,GO:0036094,GO:0042806,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0048029,GO:0048519,GO:0048523,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051239,GO:0051241,GO:0051704,GO:0051960,GO:0051961,GO:0060180,GO:0060284,GO:0065007,GO:0070085,GO:0071704,GO:2000026
Exons1
Evalue6.3e-11
EggNOG OGsCOG4154@1|root,2RZR7@2759|Eukaryota,3A1QW@33154|Opisthokonta,3BQNV@33208|Metazoa,3D6VK@33213|Bilateria,48DZ1@7711|Chordata,49B8Y@7742|Vertebrata,3JGMY@40674|Mammalia,35PWG@314146|Euarchontoglires,4Q54M@9989|Rodentia
Ec32 ortholog descriptionD-ribose pyranase RbsD/L-fucose mutarotase FucU
Ec32 orthologEc-18_003960.1
EC5.1.3.29
DescriptionFucose mutarotase
Cds size123
COG categoryG
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186955.8383007-CDS-P-wetherbeei_contig7068:134..2571683186955.8383007-CDS-P-wetherbeei_contig7068:134..257Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7068 135..257 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7068.1.1prot_P-wetherbeei_contig7068.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7068 135..257 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7068.1.1

>prot_P-wetherbeei_contig7068.1.1 ID=prot_P-wetherbeei_contig7068.1.1|Name=mRNA_P-wetherbeei_contig7068.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=41bp
MPLIGVPESITPELLYALARMGHGDAVVIADANFPSDSVAA
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mRNA from alignment at P-wetherbeei_contig7068:135..257-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7068.1.1 ID=mRNA_P-wetherbeei_contig7068.1.1|Name=mRNA_P-wetherbeei_contig7068.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=123bp|location=Sequence derived from alignment at P-wetherbeei_contig7068:135..257- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTCTGATCGGCGTTCCCGAGAGCATCACCCCCGAGCTCCTCTACGC
GCTCGCGCGCATGGGCCACGGCGATGCCGTCGTCATCGCCGACGCCAATT
TCCCTTCGGACAGCGTCGCCGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7068:135..257-

>mRNA_P-wetherbeei_contig7068.1.1 ID=mRNA_P-wetherbeei_contig7068.1.1|Name=mRNA_P-wetherbeei_contig7068.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=123bp|location=Sequence derived from alignment at P-wetherbeei_contig7068:135..257- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTCTGATCGGCGTTCCCGAGAGCATCACCCCCGAGCTCCTCTACGC
GCTCGCGCGCATGGGCCACGGCGATGCCGTCGTCATCGCCGACGCCAATT
TCCCTTCGGACAGCGTCGCCGCC
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