mRNA_P-wetherbeei_contig7067.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7067.1.2
Unique NamemRNA_P-wetherbeei_contig7067.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7067.1.2 vs. uniprot
Match: A0A836CLK4_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK4_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.970e-83
Identity = 138/240 (57.50%), Postives = 169/240 (70.42%), Query Frame = 1
Query:    4 RWHLPACAALYVSAFVRFLLSLRDAQLYGYQLGQFAAAHFAAFVVLASTLVTFAMRAGLFWFLVPASLVITNDILAYLCGITAGRTPLTRLSTKKTWEGFLGAAIGTVAAAWLYAGRWQCWAWLTTPGNVFLRSAPALAVP----EGLFRPTTVLRLLGG---VRGSPAQVHAIGLALLASLVAPFGGFFASAVKRAAGVKDFGDTIPGHGGAADRFDCQLVMLPLVYFYVKGALPDLPV 702
            RWHLPA AALY+  F+ F+ SL+  Q Y YQLGQFAAAH+A F+ L+STLV+FAMRAG+FWF +P+ LVI NDI AYLCG   G+T LT LS +KT EGF+GAA+ T   A + A  W    W+  P NV LR       P    E L+ P      LGG   ++ + AQVHA+G++LL SL+ PFGGFFASAVKRA G KDFG++IPGHGG ADRFDCQ+++LPLVYFY+K   PDL V
Sbjct:   38 RWHLPATAALYMGIFISFIFSLQMRQSYSYQLGQFAAAHYATFICLSSTLVSFAMRAGMFWFALPSLLVIVNDIAAYLCGCMFGKTQLTVLSPRKTREGFIGAAVVTAFTAMILAQSWLSSPWIFEPSNVMLRGTMTEIAPTKMSEFLYLP------LGGNYELQLTRAQVHALGISLLVSLIGPFGGFFASAVKRAYGAKDFGNSIPGHGGVADRFDCQVLLLPLVYFYIKACCPDLGV 271          
BLAST of mRNA_P-wetherbeei_contig7067.1.2 vs. uniprot
Match: A0A6H5K305_9PHAE (Phosphatidate cytidylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K305_9PHAE)

HSP 1 Score: 244 bits (623), Expect = 1.510e-75
Identity = 131/234 (55.98%), Postives = 161/234 (68.80%), Query Frame = 1
Query:    4 RWHLPACAALYVSAFVRFLLSLRDAQLYGYQLGQFAAAHFAAFVVLASTLVTFAMRAGLFWFLVPASLVITNDILAYLCGITAGRTPLTRLSTKKTWEGFLGAAIGTVAAAWLYAGRWQCWA-WLTTPGNVFLRSAPALAVPEGLFRPTTVLRLLGGVRGSPAQVHAIGLALLASLVAPFGGFFASAVKRAAGVKDFGDTIPGHGGAADRFDCQLVMLPLVYFYVKGALPDLPV 702
            RWH+P CAALYV   + F+ +LR   L  YQLGQ +AAHFA+F+VL S LV+FA R GLFWF++ ++ VI NDI AY+CG   GRTPLT LS KKT EGF+GAA+ T    WL  GRW C   WLT   NV L           +F  T  L  +  +  S A++HA  +AL+ASL+ PFGGFFAS +KRA GVKDFGDTIPGHGGA DRFDCQ+++LPLV+FY+K   PDL +
Sbjct:  218 RWHVPGCAALYVGLLLWFINTLRSPLLIMYQLGQLSAAHFASFLVLPSALVSFAARGGLFWFVIASASVIINDITAYICGRLFGRTPLTVLSPKKTREGFVGAALCTSLTGWL-TGRWLCGVDWLTASRNVILAGQGGPVDAGDIFLKTAQLPWVN-IMVSKAEIHAFWIALMASLIGPFGGFFASGLKRAYGVKDFGDTIPGHGGAGDRFDCQVMLLPLVFFYLKAFAPDLDI 449          
BLAST of mRNA_P-wetherbeei_contig7067.1.2 vs. uniprot
Match: S8DLW9_9LAMI (Phosphatidate cytidylyltransferase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8DLW9_9LAMI)

HSP 1 Score: 189 bits (480), Expect = 4.750e-55
Identity = 111/238 (46.64%), Postives = 147/238 (61.76%), Query Frame = 1
Query:    1 LRWHLPACAALYVSAFVRFLLSLRDAQLYGYQLGQFAAAHFAAFVVLASTLVTFAMR-AGLFWFLVPASLVITNDILAYLCGITAGRTPLTRLSTKKTWEGFLGAAIGTVAAAWLYAGRWQCWAWLTTP----GNVFLRSAPAL-------AVPEGL--FRPTTVLRLLGGVRGSPAQVHAIGLALLASLVAPFGGFFASAVKRAAGVKDFGDTIPGHGGAADRFDCQLVMLPLVYFY 672
            +++H+  C  LY++ F+ F+LSL+  ++Y YQ GQ+A  H    VV A +  T A+   G+FWFL+PASL+I NDI AY+ G   GRTPL +LS KKTWEGF+GA++ T+ +A+L A     + WLT P       +LR  P L       A PE    + P + + +L      P Q HAI L L AS++APFGGFFAS  KRA  +KDFGD+IPGHGG  DR DCQ+VM    Y Y
Sbjct:  138 IKYHMVTCYFLYITGFIWFILSLKK-RMYKYQFGQYAWTHMILIVVFAQSSFTVAIIFEGIFWFLLPASLIIINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVTTIISAFLLANILGGFQWLTCPRRDLSTSWLRCDPGLLFKPEYFAFPEWFPKWLPWSEIAIL------PVQWHAIWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAVFAYIY 368          
BLAST of mRNA_P-wetherbeei_contig7067.1.2 vs. uniprot
Match: A0A2J6MC88_LACSA (Phosphatidate cytidylyltransferase n=7 Tax=Asteraceae TaxID=4210 RepID=A0A2J6MC88_LACSA)

HSP 1 Score: 189 bits (480), Expect = 1.540e-54
Identity = 105/235 (44.68%), Postives = 146/235 (62.13%), Query Frame = 1
Query:    1 LRWHLPACAALYVSAFVRFLLSLRDAQLYGYQLGQFAAAHFAAFVVLASTLVTFA-MRAGLFWFLVPASLVITNDILAYLCGITAGRTPLTRLSTKKTWEGFLGAAIGTVAAAWLYAGRWQCWAWLTTPGNVFLRSAPALAVPEGLFRPTTV----------LRLLGGVRGSPAQVHAIGLALLASLVAPFGGFFASAVKRAAGVKDFGDTIPGHGGAADRFDCQLVMLPLVYFY 672
            +++H+  C  LY++ FV F+LSL+  ++Y YQ GQ+A  H    VV   +  T A +  G+FWFL+PASL++ NDI AY+ G   G+TPL +LS KKTWEGF+GA++ T+ +A++ A  +  + WLT P    L +      P+ LF+P             +++L      P Q HA+GL L AS++APFGGFFAS  KRA  +KDFGD+IPGHGG  DR DCQ+VM    Y Y
Sbjct:  144 IKYHMVTCYFLYITGFVWFILSLKK-KMYKYQFGQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIAAYIFGFFFGKTPLIKLSPKKTWEGFIGASVSTIISAFVLANLFGRFQWLTCPRKD-LSTGWLQCDPDPLFKPENFVLPEWFPWKEMQIL------PVQWHALGLGLFASIIAPFGGFFASGFKRAFNIKDFGDSIPGHGGMTDRMDCQMVMAVFAYIY 370          
BLAST of mRNA_P-wetherbeei_contig7067.1.2 vs. uniprot
Match: CDS2_ARATH (Phosphatidate cytidylyltransferase 2 n=21 Tax=Brassicaceae TaxID=3700 RepID=CDS2_ARATH)

HSP 1 Score: 189 bits (479), Expect = 2.500e-54
Identity = 110/235 (46.81%), Postives = 144/235 (61.28%), Query Frame = 1
Query:    1 LRWHLPACAALYVSAFVRFLLSLRDAQLYGYQLGQFAAAHFAAFVVLASTLVTFA-MRAGLFWFLVPASLVITNDILAYLCGITAGRTPLTRLSTKKTWEGFLGAAIGTVAAAWLYAGRWQCWAWLTTPGNVFLRSAPALAVPEGLFRPTTVLRLLGG----------VRGSPAQVHAIGLALLASLVAPFGGFFASAVKRAAGVKDFGDTIPGHGGAADRFDCQLVMLPLVYFY 672
            +++H+  C +LY+S FV F+L+L+  ++Y YQ  Q+A  H    VV   +  T A +  G+FWFL+PASL++ NDI AY+CG   GRTPL +LS KKTWEGF+GA+I TV +A+L A     + WLT P    L +   L  P  LF+  T    L G          +   P Q HA+ L L AS++APFGGFFAS  KRA  +KDFGD+IPGHGG  DR DCQ+VM    Y Y
Sbjct:  147 IKYHMAICYSLYISGFVWFILTLKK-KMYKYQFSQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLIKLSPKKTWEGFIGASITTVISAFLLANIMGRFLWLTCPRED-LSTGWLLCDPGPLFKQET--HALPGWISDWLPWKEISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIY 377          
BLAST of mRNA_P-wetherbeei_contig7067.1.2 vs. uniprot
Match: UPI001CB97CC2 (phosphatidate cytidylyltransferase 1-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB97CC2)

HSP 1 Score: 188 bits (477), Expect = 5.060e-54
Identity = 108/239 (45.19%), Postives = 146/239 (61.09%), Query Frame = 1
Query:    1 LRWHLPACAALYVSAFVRFLLSLRDAQLYGYQLGQFAAAHFAAFVVLASTLVTFA-MRAGLFWFLVPASLVITNDILAYLCGITAGRTPLTRLSTKKTWEGFLGAAIGTVAAAWLYAGRWQCWAWLTTPGNVFLRSAPALAVPEGLFRPT--------------TVLRLLGGVRGSPAQVHAIGLALLASLVAPFGGFFASAVKRAAGVKDFGDTIPGHGGAADRFDCQLVMLPLVYFY 672
            +++H+  C +LY+  FV F+LSL+  +LY YQ GQ+A  H    VV   +  T A +  G+FWFL+PASL++ NDI AY+ G   G+TPL +LS KKTWEGF+GA+  T+ +A+L A  +  + WLT P    L +      P+ LF+P               T +++L      P Q HA+GL L AS++APFGGFFAS  KRA  +KDFGD+IPGHGG  DR DCQ+VM    Y Y
Sbjct:  147 IKYHMVTCYSLYLIGFVWFILSLKK-KLYKYQFGQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIAAYIFGFFFGKTPLIKLSPKKTWEGFIGASFTTIISAFLLANFFGRFQWLTCPRKD-LSTGWLQCDPDPLFKPENFALPGWLPEWFPWTEIQIL------PVQWHALGLGLFASIIAPFGGFFASGFKRAFNIKDFGDSIPGHGGMTDRMDCQMVMAVFAYIY 377          
BLAST of mRNA_P-wetherbeei_contig7067.1.2 vs. uniprot
Match: A0A7C8ZT41_OPUST (Phosphatidate cytidylyltransferase n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZT41_OPUST)

HSP 1 Score: 187 bits (475), Expect = 8.530e-54
Identity = 104/229 (45.41%), Postives = 142/229 (62.01%), Query Frame = 1
Query:    1 LRWHLPACAALYVSAFVRFLLSLRDAQLYGYQLGQFAAAHFAAFVVLASTLVTFA-MRAGLFWFLVPASLVITNDILAYLCGITAGRTPLTRLSTKKTWEGFLGAAIGTVAAAWLYAGRWQCWAWLTTPGNVFLRSAPALAVPEGLFRPTTVLRLLGG----VRGSPAQVHAIGLALLASLVAPFGGFFASAVKRAAGVKDFGDTIPGHGGAADRFDCQLVMLPLVYFY 672
            +++H+  C +LY++ F+ F+L+L+  ++Y YQ GQ+A  H    VV   +  T A +  G+FWFL+PASL++ NDI AYLCG   GRTPL +LS KKTWEGF+GA++ T+ +A+L A     + WLT P    L +      P   F+P +           +   P Q HA+ L L AS++APFGGFFAS  KRA  +KDFGD+IPGHGG  DR DCQ+VM    Y Y
Sbjct:  144 IKYHMVICYSLYIAGFMWFILTLKK-KMYKYQFGQYAWTHMILIVVFTQSAFTVANIFEGIFWFLLPASLIVINDIAAYLCGFFFGRTPLIKLSPKKTWEGFIGASVATIISAFLLANVMGQFEWLTCP-RTDLSAGWLHCDPGPFFKPESYNLPSWSPWKEISIMPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIY 370          
BLAST of mRNA_P-wetherbeei_contig7067.1.2 vs. uniprot
Match: B9RXC8_RICCO (Phosphatidate cytidylyltransferase n=2 Tax=Euphorbiaceae TaxID=3977 RepID=B9RXC8_RICCO)

HSP 1 Score: 187 bits (475), Expect = 9.800e-54
Identity = 106/232 (45.69%), Postives = 145/232 (62.50%), Query Frame = 1
Query:    1 LRWHLPACAALYVSAFVRFLLSLRDAQLYGYQLGQFAAAHFAAFVVLASTLVTFA-MRAGLFWFLVPASLVITNDILAYLCGITAGRTPLTRLSTKKTWEGFLGAAIGTVAAAWLYAGRWQCWAWLTTP----GNVFLRSAPA-LAVPEGLFRPTTVLRLLGGVRGS--PAQVHAIGLALLASLVAPFGGFFASAVKRAAGVKDFGDTIPGHGGAADRFDCQLVMLPLVYFY 672
            +++H+  C  LY++ F+ F+L+L+  ++Y YQ GQ+A  H    VV   +  T A +  G+FWFL+PASL++ NDI AY+CG   GRTPL +LS KKTWEGF+GA++ T+ +A++ A     + WLT P     + +L+  P  L  PE    P  V +       S  P Q HA+ L L AS++APFGGFFAS  KRA  +KDFGD+IPGHGG  DR DCQ+VM    Y Y
Sbjct:  146 IKYHMAMCYFLYIAGFMWFILTLKK-KMYKYQFGQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLIKLSPKKTWEGFIGASVTTMISAFVLANMMGRFQWLTCPRKDLSSGWLQCDPGPLFKPEYFILPEWVPQWFPWKEISILPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIY 376          
BLAST of mRNA_P-wetherbeei_contig7067.1.2 vs. uniprot
Match: A0A6A2WEJ9_HIBSY (Phosphatidate cytidylyltransferase n=3 Tax=Malvoideae TaxID=214907 RepID=A0A6A2WEJ9_HIBSY)

HSP 1 Score: 183 bits (465), Expect = 1.620e-53
Identity = 107/234 (45.73%), Postives = 145/234 (61.97%), Query Frame = 1
Query:    4 RWHLPACAALYVSAFVRFLLSLRDAQLYGYQLGQFAAAHFAAFVVLASTLVTFA-MRAGLFWFLVPASLVITNDILAYLCGITAGRTPLTRLSTKKTWEGFLGAAIGTVAAAWLYA---GRWQCWAWLTTP----GNVFLRSAPA-LAVPEGLFRPTTVLRLLGGVRGS--PAQVHAIGLALLASLVAPFGGFFASAVKRAAGVKDFGDTIPGHGGAADRFDCQLVMLPLVYFY 672
            ++H+  C  LY++ F+ F+L+L+  ++Y YQ GQ+A  H    VV   +  T A +  G+FWFL+PASL++ NDI AY+ G   GRTPL +LS KKTWEGF+GA++ T+ +A++ A   GR+Q   WLT P       +L+  P  L  PE  F P  + +       S  P Q HA+   L AS++APFGGFFAS  KRA  +KDFGD+IPGHGG  DR DCQ+VM    Y Y
Sbjct:   32 KYHMAICYFLYIAGFMWFILTLKK-KMYKYQFGQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYIFGFFFGRTPLIKLSPKKTWEGFIGASVTTIISAFVLANILGRFQ---WLTCPRKDLSTGWLQCDPGPLFKPENFFLPGWISQWFPWKEISVLPVQWHALCFGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIY 261          
BLAST of mRNA_P-wetherbeei_contig7067.1.2 vs. uniprot
Match: UPI000B7958A7 (phosphatidate cytidylyltransferase 1-like n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B7958A7)

HSP 1 Score: 184 bits (468), Expect = 7.580e-53
Identity = 108/231 (46.75%), Postives = 140/231 (60.61%), Query Frame = 1
Query:    4 RWHLPACAALYVSAFVRFLLSLRDAQLYGYQLGQFAAAHFAAFVVLASTLVTFA-MRAGLFWFLVPASLVITNDILAYLCGITAGRTPLTRLSTKKTWEGFLGAAIGTVAAAWLYAGRWQCWAWLTTP----GNVFLRSAPA-LAVPEGLFRPTTVLRLLGGVRGS--PAQVHAIGLALLASLVAPFGGFFASAVKRAAGVKDFGDTIPGHGGAADRFDCQLVMLPLVYFY 672
            ++H+  C  LY++ FV F+LSL+  ++Y YQ GQFA  H    VV   +  T A +  G+FWFL+PASL++ NDI AYL G   GRTPL +LS KKTWEGF+GA++ T+ +A+L A     + WLT P       +L   P  L  PE    P  +   L        P Q HA+ L L +S++APFGGFFAS  KRA  +KDFGD+IPGHGG  DR DCQ+VM    Y Y
Sbjct:  135 KYHMVICYFLYIAGFVWFILSLKK-KMYKYQFGQFAWTHMILIVVFTQSSFTVANIFEGMFWFLLPASLIVINDIAAYLFGFFFGRTPLIKLSPKKTWEGFIGASVTTIISAFLLANVMGRFEWLTCPREDLSTGWLHCDPGPLFKPEYYHLPGLIANWLPWKETPVMPVQWHALCLGLFSSIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIY 364          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7067.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLK4_9STRA1.970e-8357.50Phosphatidate cytidylyltransferase n=1 Tax=Tribone... [more]
A0A6H5K305_9PHAE1.510e-7555.98Phosphatidate cytidylyltransferase n=2 Tax=Ectocar... [more]
S8DLW9_9LAMI4.750e-5546.64Phosphatidate cytidylyltransferase (Fragment) n=1 ... [more]
A0A2J6MC88_LACSA1.540e-5444.68Phosphatidate cytidylyltransferase n=7 Tax=Asterac... [more]
CDS2_ARATH2.500e-5446.81Phosphatidate cytidylyltransferase 2 n=21 Tax=Bras... [more]
UPI001CB97CC25.060e-5445.19phosphatidate cytidylyltransferase 1-like n=1 Tax=... [more]
A0A7C8ZT41_OPUST8.530e-5445.41Phosphatidate cytidylyltransferase n=1 Tax=Opuntia... [more]
B9RXC8_RICCO9.800e-5445.69Phosphatidate cytidylyltransferase n=2 Tax=Euphorb... [more]
A0A6A2WEJ9_HIBSY1.620e-5345.73Phosphatidate cytidylyltransferase n=3 Tax=Malvoid... [more]
UPI000B7958A77.580e-5346.75phosphatidate cytidylyltransferase 1-like n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7067contigP-wetherbeei_contig7067:1371..2682 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FP19
Preferred nameCDS1
PFAMsCTP_transf_1
Model size705
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K00981,ko:K08818
KEGG ReactionR01799
KEGG Pathwayko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070
KEGG ModuleM00093
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004142,GO:0004605,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005783,GO:0005789,GO:0006139,GO:0006220,GO:0006221,GO:0006575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006656,GO:0006657,GO:0006658,GO:0006661,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0007602,GO:0007603,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009266,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009584,GO:0009605,GO:0009628,GO:0009653,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010511,GO:0010513,GO:0010562,GO:0010866,GO:0010868,GO:0010883,GO:0012505,GO:0016020,GO:0016021,GO:0016024,GO:0016056,GO:0016740,GO:0016772,GO:0016779,GO:0016780,GO:0017169,GO:0018130,GO:0019216,GO:0019220,GO:0019222,GO:0019438,GO:0019637,GO:0019866,GO:0019953,GO:0022412,GO:0022414,GO:0023052,GO:0030133,GO:0030154,GO:0031090,GO:0031224,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031410,GO:0031966,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0034641,GO:0034654,GO:0040007,GO:0040011,GO:0042175,GO:0042330,GO:0043052,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045017,GO:0045833,GO:0045834,GO:0045937,GO:0046341,GO:0046470,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0046488,GO:0046889,GO:0046890,GO:0048232,GO:0048468,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051055,GO:0051174,GO:0051606,GO:0051704,GO:0051716,GO:0055086,GO:0065007,GO:0065008,GO:0070085,GO:0070319,GO:0070382,GO:0070567,GO:0071071,GO:0071073,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0072527,GO:0072528,GO:0080090,GO:0080186,GO:0090207,GO:0090209,GO:0090407,GO:0097164,GO:0097708,GO:0098827,GO:0099503,GO:0104004,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903725,GO:1903727,GO:1905952
Exons3
Evalue3.19e-80
EggNOG OGsCOG0575@1|root,KOG1440@2759|Eukaryota
Ec32 ortholog descriptionphosphatidate cytidylyltransferase
Ec32 orthologEc-05_001740.1
EC2.7.11.22,2.7.7.41
Descriptionphosphatidate cytidylyltransferase activity
Cds size705
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186955.7091963-CDS-P-wetherbeei_contig7067:1370..15551683186955.7091963-CDS-P-wetherbeei_contig7067:1370..1555Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7067 1371..1555 +
1683186955.7269185-CDS-P-wetherbeei_contig7067:1893..22141683186955.7269185-CDS-P-wetherbeei_contig7067:1893..2214Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7067 1894..2214 +
1683186955.7350447-CDS-P-wetherbeei_contig7067:2483..26821683186955.7350447-CDS-P-wetherbeei_contig7067:2483..2682Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7067 2484..2682 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7067.1.2prot_P-wetherbeei_contig7067.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7067 1371..2682 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7067.1.2

>prot_P-wetherbeei_contig7067.1.2 ID=prot_P-wetherbeei_contig7067.1.2|Name=mRNA_P-wetherbeei_contig7067.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=235bp
LRWHLPACAALYVSAFVRFLLSLRDAQLYGYQLGQFAAAHFAAFVVLAST
LVTFAMRAGLFWFLVPASLVITNDILAYLCGITAGRTPLTRLSTKKTWEG
FLGAAIGTVAAAWLYAGRWQCWAWLTTPGNVFLRSAPALAVPEGLFRPTT
VLRLLGGVRGSPAQVHAIGLALLASLVAPFGGFFASAVKRAAGVKDFGDT
IPGHGGAADRFDCQLVMLPLVYFYVKGALPDLPV*
back to top

mRNA from alignment at P-wetherbeei_contig7067:1371..2682+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7067.1.2 ID=mRNA_P-wetherbeei_contig7067.1.2|Name=mRNA_P-wetherbeei_contig7067.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1312bp|location=Sequence derived from alignment at P-wetherbeei_contig7067:1371..2682+ (Phaeothamnion wetherbeei SAG_119_79)
CTGAGATGGCACCTGCCCGCGTGCGCCGCGCTGTACGTATCGGCCTTTGT GCGCTTCCTGCTGAGCCTGCGGGACGCGCAGCTGTATGGGTACCAGCTCG GACAGTTCGCGGCGGCGCACTTCGCCGCGTTCGTGGTGCTGGCGTCGACG CTGGTGACTTTTGCCATGCGGGCTGGCCTCTTCTGGTGAGCGGCGGCGGC GGTCGACGATTTTCCGTGCGGGGTGGCTTCTTTTTTCCATTCTTTTCTTC TGGAATTCCAACCGGCGTTCCTTTGTTCAAGTGCTTGCATCGATCTATCG ACGTATTTTATCGTAAGATGACACTGGTTATTCTTCTCTGTGTGGCTGCT CAGATGTGGTTGAAAAGGATGGCACGGCCATGGCAGGATTTGTGGAGGAT TAGTCGGCCGCCCAATTGATTTGTTTCGTCCTGCTTGTTCCCGCCTTCCC GTTATTTCGTCCTGTGGCCGATTGACTAAAACGTTCATTCTGCCGGATTC CGTCGTCTCCTTCGTCCTTTCAGGTTCCTGGTGCCGGCATCGCTCGTCAT CACCAACGACATCCTCGCCTACCTCTGCGGCATCACCGCCGGCCGCACCC CGCTCACGCGCCTCTCCACCAAGAAGACCTGGGAAGGCTTCCTCGGCGCC GCCATCGGCACCGTCGCCGCCGCCTGGCTCTACGCTGGCCGCTGGCAGTG CTGGGCCTGGCTGACGACCCCGGGAAACGTGTTTTTGAGGAGCGCGCCGG CGCTGGCGGTGCCGGAGGGGCTGTTCCGGCCGACGACCGTCCTGCGGCTG CTGGGCGGCGTACGCGGCTCGCCGGCGCAGGTCCACGCCATCGGGTGAGT CACCGGGGTGGACGGCATATCGGTTAATGTTGGTGTTGTGGGTTTTTGTC CAGCGCCCTTTCTTTGTCAGCATCTAAACGCTCAAGAAGATCGGTCCTGG AAGGCAGGTGGTCCGGAGCACAGGCGCCGCGCCTCGTCGTGAGAGTGCTC TGACAGGTTGAGCCTTGAAACCTTATCACTGTTCCAACCTTTTTTCTTTC CGCATTGGCTCTGACCCGGCGCCGATCCGTCACAAAACGCCCACTTCGAA CAATCCTTTCCAGGCTGGCGCTGCTGGCGTCGCTGGTGGCGCCGTTCGGC GGGTTCTTCGCCAGCGCCGTCAAGCGGGCAGCCGGTGTCAAGGACTTTGG GGACACCATCCCGGGCCACGGCGGCGCCGCCGACCGGTTCGACTGCCAGC TCGTCATGCTGCCGCTCGTTTACTTCTACGTCAAGGGCGCGCTGCCCGAT CTCCCCGTTTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig7067:1371..2682+

>mRNA_P-wetherbeei_contig7067.1.2 ID=mRNA_P-wetherbeei_contig7067.1.2|Name=mRNA_P-wetherbeei_contig7067.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=705bp|location=Sequence derived from alignment at P-wetherbeei_contig7067:1371..2682+ (Phaeothamnion wetherbeei SAG_119_79)
CTGAGATGGCACCTGCCCGCGTGCGCCGCGCTGTACGTATCGGCCTTTGT
GCGCTTCCTGCTGAGCCTGCGGGACGCGCAGCTGTATGGGTACCAGCTCG
GACAGTTCGCGGCGGCGCACTTCGCCGCGTTCGTGGTGCTGGCGTCGACG
CTGGTGACTTTTGCCATGCGGGCTGGCCTCTTCTGGTTCCTGGTGCCGGC
ATCGCTCGTCATCACCAACGACATCCTCGCCTACCTCTGCGGCATCACCG
CCGGCCGCACCCCGCTCACGCGCCTCTCCACCAAGAAGACCTGGGAAGGC
TTCCTCGGCGCCGCCATCGGCACCGTCGCCGCCGCCTGGCTCTACGCTGG
CCGCTGGCAGTGCTGGGCCTGGCTGACGACCCCGGGAAACGTGTTTTTGA
GGAGCGCGCCGGCGCTGGCGGTGCCGGAGGGGCTGTTCCGGCCGACGACC
GTCCTGCGGCTGCTGGGCGGCGTACGCGGCTCGCCGGCGCAGGTCCACGC
CATCGGGCTGGCGCTGCTGGCGTCGCTGGTGGCGCCGTTCGGCGGGTTCT
TCGCCAGCGCCGTCAAGCGGGCAGCCGGTGTCAAGGACTTTGGGGACACC
ATCCCGGGCCACGGCGGCGCCGCCGACCGGTTCGACTGCCAGCTCGTCAT
GCTGCCGCTCGTTTACTTCTACGTCAAGGGCGCGCTGCCCGATCTCCCCG
TTTAA
back to top