mRNA_P-wetherbeei_contig704.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig704.6.1 vs. uniprot
Match: A0A836CIZ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ0_9STRA) HSP 1 Score: 191 bits (484), Expect = 4.380e-54 Identity = 120/276 (43.48%), Postives = 159/276 (57.61%), Query Frame = 1
Query: 346 QVIDTLRTDYPTLFYEPLDFGIYTKDIEIRDPTGVAFRGINTYRRLFAVLRFFRQVLLESAQTSFKLTYDWQHQAVRVTWHVVAAMKSQRQRPLYLDGVSVYSLTDDGLVKSHVFETIIVNGTPVEPPFAYAWINLDSWLGAETPTMVPGGVASSLLAAPAKIXXXXXXXXXXXXXXPVQMAATALLTPVQVAAXXXXXXXXXXXXXAPRNEGGRSQRSSSSGNKNSARSKQDK-GWPKVDLPNSCESSWDCDSPQTCCDFVLFKVCCSQGGLGTP 1170
+VIDTLR+DYP L EPLD+ IYT DI ++DP+GV F+GI TY+RLFA LRFFR +++ T F++TYDW Q VRV WH+ + K++ P+++D +SVY + D+G V +H ETI+V + + W+ +E G A++ A + XXXXXXXXXXXXXX AA SS G+ RSK + WPKVDLP+ CE SWDC+SP TCCDF LFKVCC+QG +G+P
Sbjct: 46 KVIDTLRSDYPELLNEPLDYSIYTDDITVKDPSGVEFKGIGTYKRLFATLRFFRHTFVDTVDTRFRVTYDWARQRVRVNWHMALSFKARAGHPVFVDCISVYHINDEGFVSAHDLETIMVXXXXXXXXXXXXAM-MGLWVRSEKGV---GAAAAATTTAMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAALRGD--------------------SSGGGDAGKDRSKAPRLAWPKVDLPSGCEDSWDCESPMTCCDFALFKVCCNQG-MGSP 296
BLAST of mRNA_P-wetherbeei_contig704.6.1 vs. uniprot
Match: A0A6H5KRU5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRU5_9PHAE) HSP 1 Score: 193 bits (490), Expect = 4.270e-53 Identity = 116/312 (37.18%), Postives = 152/312 (48.72%), Query Frame = 1
Query: 346 QVIDTLRTDYPTLFYEPLDFGIYTKDIEIRDPTGVAFRGINTYRRLFAVLRFFRQVLLESAQTSFKLTYDWQHQAVRVTWHVVAAMKSQRQRPLYLDGVSVYSLTDDGLVKSHVFETIIVNGTPVEPPFAYAWINLDSWLGAETPTMVPGGVASSLLAAPAKIXXXXXXXXXXXXXXPVQMAATALLTPVQVAAXXXXXXXXXXXXXAPRNEGGRSQRSSSSGN-----------------------------------------KNSARSKQDKGW-PKVDLPNSCESSWDCDSPQTCCDFVLFKVCCSQG 1155
+VI TLR DYP +F++P F I+T++IE+RDPTGVAFRGI+ Y+R+FA LRFFRQ + A T+F+LTYDW Q VRVTW+VV +K+ RQRP+Y+DG+S Y + DGL H ET++VNG VEPPFAYAWINL +W+ P G A + L P + + A A+ + + + G S+ KN+A GW +CE+SWDC CCDFVL KVCCS G
Sbjct: 140 KVISTLREDYPRIFFDPPAFDIFTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNVVLQLKA-RQRPIYVDGISAYHINSDGLAHRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGA-VAKPSG-AGAALPTPHAVIGGAPTQLFEQQQGEAEDAVGAMFDAARTDSELRGDYMQALSTVLMMDTDGVSESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNNAG-----GWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNG 443
BLAST of mRNA_P-wetherbeei_contig704.6.1 vs. uniprot
Match: D8LJ76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ76_ECTSI) HSP 1 Score: 162 bits (409), Expect = 1.290e-42 Identity = 74/140 (52.86%), Postives = 98/140 (70.00%), Query Frame = 1
Query: 346 QVIDTLRTDYPTLFYEPLDFGIYTKDIEIRDPTGVAFRGINTYRRLFAVLRFFRQVLLESAQTSFKLTYDWQHQAVRVTWHVVAAMKSQRQRPLYLDGVSVYSLTDDGLVKSHVFETIIVNGTPVEPPFAYAWINLDSWL 765
+VIDTLR DY T+ EPL+F IYT D+++RDP+GV G+ Y+R+F RF R+ L+ T F+L+YD Q VR+TWH+V RP++LDG SVY L+ +GLV+ H ETIIVNGTPV+PPFA AW+ L SW+
Sbjct: 28 KVIDTLREDYATMLDEPLNFEIYTPDLQLRDPSGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQVRITWHLVLDATPMVVRPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPFAQAWMQLPSWV 167
BLAST of mRNA_P-wetherbeei_contig704.6.1 vs. uniprot
Match: A0A6H5JCH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH5_9PHAE) HSP 1 Score: 147 bits (371), Expect = 6.680e-36 Identity = 76/179 (42.46%), Postives = 99/179 (55.31%), Query Frame = 1
Query: 346 QVIDTLRTDYPTLFYEPLDFGIYTKDIEIRDPTGVAFRGINTYRRLFAVLRFFRQVLLESAQTSFKLTYDWQHQ---------------------------------------AVRVTWHVVAAMKSQRQRPLYLDGVSVYSLTDDGLVKSHVFETIIVNGTPVEPPFAYAWINLDSWL 765
+VIDTLR DYPT+ EPL+F IYT D+++RDP+GV G+ Y+R+F RF R+ L+ T F+L+YD Q VRVTWH+V RP++LDG SVY L+ +GLV+ H ETIIVNGTPV+PPFA AW+ L SW+
Sbjct: 116 KVIDTLREDYPTMLDEPLNFDIYTPDLQLRDPSGVILTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQDDEQLLVHPCEMQPWTGRNDWPSVIGSVGNNAPSSRGRVVRVTWHLVLDATPMVARPVHLDGTSVYGLSTEGLVRRHDLETIIVNGTPVKPPFAQAWMQLPSWV 294
BLAST of mRNA_P-wetherbeei_contig704.6.1 vs. uniprot
Match: F0YHN2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHN2_AURAN) HSP 1 Score: 139 bits (349), Expect = 7.200e-34 Identity = 83/276 (30.07%), Postives = 134/276 (48.55%), Query Frame = 1
Query: 346 QVIDTLRTDYPTLFYEPLDFGIYTKDIEIRDPTGVAFRGINTYRRLFAVLRFFRQVLLESAQTSFKLTYDWQHQAVRVTWHVVAAMKSQRQRPLYLDGVSVYSLTDDGLVKSHVFETIIVNGTPVEPPFAYAWINLDSWLGAETPTMVPGGVASSLLAAPAKIXXXXXXXXXXXXXXPVQMA-ATALLTPVQVAAXXXXXXXXXXXXXAPRNEGGRSQRSSSSGNKNSARSKQDKGWPKVDLPNSCESSWDCDSPQTCCDFVLFKVCCSQGGLGTP 1170
+ ID L+ D P ++ +YT D+++ DPTGV RG+ +Y++ FA++R FR+V+++ A+ +++L YDW + + VTW+ + R P ++D VS + L ++G + H + + +NG + PP++ W+ + V L APA + A L + VAA A + GRS+ + + K G K P +CE+ WDCDSP CCDFVLFK+CC+ GG+G P
Sbjct: 104 EAIDALKADVPDFPDREPNYAVYTADVQLADPTGVQTRGLTSYKQFFAMIRLFRRVMIDRAEVTYRLRYDWSGKRIIVTWYSSWTARGSRT-PAHVDAVSYFHLNEEGRIFKHEVDRVQINGQMMNPPYSVGWLAFRQY------------VLQGLDGAPAPAGAGAQAWFDARHRLEAAVTDADVLFSGTDVAAEPP----------AKAKKAGRSK---------NLKKKSPLGKLK---PGTCENMWDCDSPMQCCDFVLFKMCCN-GGVGIP 343
BLAST of mRNA_P-wetherbeei_contig704.6.1 vs. uniprot
Match: A0A0M0JBU2_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JBU2_9EUKA) HSP 1 Score: 107 bits (267), Expect = 3.330e-22 Identity = 93/303 (30.69%), Postives = 133/303 (43.89%), Query Frame = 1
Query: 346 QVIDTLRTDYPTLFYEPLDFGIYTKDIEIRDPTGVAFRGINTYRRLFAVLRFFRQVLLESAQTSFKLTYDWQHQAVRVTWHVVAAMKSQ----------RQRPLYLDGVSVYSLTDDGLVKSHVFETIIVNG-----TPVEPPFAYAWINLDSWLGAETP-TMVP--GGVASSLLA---APAKIXXXXXXXXXXXXXXPVQMAATALLTPVQVAAXXXXXXXXXXXXXAPRNEGGRSQRSSSSGNKNSARSKQDKGWPK--VDL-----PNSCESSWDCDSPQTCCDFVLFKVCCSQGGLGTP 1170
+ ID LR DYP LF E D I+T +IE+ DP+G G Y R+F LRF R+ ++ AQ +L D +++RV W+ M+ +++DGVSVY L DGL++ H E I++ G TP++ A+AW G TP VP +A +LL + + A T P Q +A P R + ++ + + K PK VDL P SCE+S+DCD+P CCD + VCC+ GGL P
Sbjct: 85 RAIDVLRHDYPRLFTERPDMSIFTDNIELHDPSGKRLAGKKQYERVFDALRFLRRTTMQDAQVGIRLVAD--DKSIRVRWNAKLWMRDPATGLTTLVNGEPALVHIDGVSVYDLDKDGLIRQHRLENIVLTGQEPLATPIQ--LAFAW----PATGYATPQAAVPFFQPLADALLNFGFSSTSSGASEAGTEGTESEDGRRAAPTRRAPPPQASASDDE---------TPLERAARERAEDAAKQQRLRDLRTPKTAPKSGVDLFGLTGPQSCETSYDCDAPMVCCDLLFATVCCT-GGLLIP 369
BLAST of mRNA_P-wetherbeei_contig704.6.1 vs. uniprot
Match: A0A7S0Q5J3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5J3_9EUKA) HSP 1 Score: 106 bits (264), Expect = 5.740e-22 Identity = 84/282 (29.79%), Postives = 121/282 (42.91%), Query Frame = 1
Query: 352 IDTLRTDYPTLFYEPLDFGIYTKDIEIRDPTGVAFRGINTYRRLFAVLRFFRQVLLESAQTSFKLTYDWQHQAVRVTWHVVAAMKSQR---QRPLYLDGVSVYSLTDDGLVKSHVFETIIVNGTPVEPPFAYAWINLDSWLGAETPTMVPGGVASSLLA--APAKIXXXXXXXXXXXXXXPVQMAATALLTPVQVA----AXXXXXXXXXXXXXAPRNEGGRSQRSSSSGNKNSARSKQDKGWPKVDLPNSCESSWDCDSPQTCCDFVLFKVCCSQGGLGTP 1170
IDTLR DYP LF D ++ DIE++D +G RG Y R F +LRF R+ + A+ ++ L + + +R+ W ++ QR +DGVSVY L +GL++ H E I++ G E P + +L +GA +P L AP + PV AA + TP+Q A A AP +GG + P CESS+DC+SP CCD + VCC+ GG+ P
Sbjct: 79 IDTLRFDYPRLFDASPDLSVFRDDIELQDLSGARLRGKKAYARCFDMLRFLRRTSMSDAEMTYHLYVNGR--TIRMRWSAKLLLRDPAFGIQRLDIVDGVSVYELDAEGLIRLHKLENIVLRGH--EQPMPVSLASLWPRVGATPELALPFFRVLRLAVEQAPQQPRLAQAQPTSRRAPVPVASAAASGETPMQRAQREQAEDAEKARRIAEQRAPDKKGGLGAAFG------------------LRAPQPCESSYDCESPMVCCDLIFASVCCT-GGMMIP 337
BLAST of mRNA_P-wetherbeei_contig704.6.1 vs. uniprot
Match: A0A7S2VCF0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCF0_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.540e-21 Identity = 53/157 (33.76%), Postives = 85/157 (54.14%), Query Frame = 1
Query: 346 QVIDTLRTDYPTLFYEPLDFGIYTKDIEIRDPTGVAFRGINTYRRLFAVLR-FFRQVLLESAQTSFKLTYDWQHQAVRVTWHVVAAMKSQRQRPLYLDGVSVYSLT-DDGLVKSHVFETIIVNGTPVEPPFAYAWINLDSWLGAETPTMVPGGVASS 810
+ +D LR+D + E DF IY K+IE+ DP+GV G+ Y+ FA + F R E + F++ YD+ ++R++W+VV K RPL++DG+S Y L G V H E +++N +PV PP+ + L +P VP G+ ++
Sbjct: 81 KAMDVLRSDMRDILTEKPDFSIYDKNIEVIDPSGVRLNGLKQYKSAFAFFQTFIRFWFSEKSGLQFRMVYDFARCSIRISWNVVLVPKVPLGRPLHVDGISYYQLDRKSGKVVEHKIENLLINNSPVAPPYGLFSLVQQDMLRIRSPQGVPAGIGAA 237
BLAST of mRNA_P-wetherbeei_contig704.6.1 vs. uniprot
Match: A0A7R9WVZ4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVZ4_9STRA) HSP 1 Score: 100 bits (249), Expect = 7.110e-21 Identity = 50/158 (31.65%), Postives = 86/158 (54.43%), Query Frame = 1
Query: 346 QVIDTLRTDYPTLFYEPLDFGIYTKDIEIRDPTGVAFRGINTYRRLFAVLRFFRQVLL-ESAQTSFKLTYDWQHQAVRVTWHVVAAMKSQRQRPLYLDGVSVYSL-TDDGLVKSHVFETIIVNGTPVEPPFAYAWINLDSWLGAETPTMVPGGVASSL 813
+ +DT+R D P + D+ IY KDI + DP+GV +G++ Y+ L+ F + E + F++ YD+ +++V+W+ V K RP+Y+DG+SVY L + G + H FE +I+N TPV PP+ + +G +V G+ + +
Sbjct: 82 KAMDTIRKDMPEILRRKPDYSIYHKDITVVDPSGVTIQGLDNYKSSIKFLQTFLKFWFKERSGLQFRMVYDFCRSSIKVSWNAVLIPKVPLGRPVYVDGISVYKLDVESGKIMEHKFENLIINNTPVVPPYGMFSMMQQDLMGLTPQGVVSPGIPAGI 239
BLAST of mRNA_P-wetherbeei_contig704.6.1 vs. uniprot
Match: A0A7S0PU43_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PU43_9EUKA) HSP 1 Score: 92.4 bits (228), Expect = 9.700e-18 Identity = 51/135 (37.78%), Postives = 75/135 (55.56%), Query Frame = 1
Query: 346 QVIDTLRTDYPTLFYEPLDFGIYTKDIEIRDPTGVAFRGINTYRRLFAVLRFFRQVLLESAQTSFKLTYDWQHQAVRVTWHVVAAMKSQR---QRPLYLDGVSVYSLTDDGLVKSHVFETIIVNGTPVEPPFAYA 741
+VIDTLR DYP LF + D I+ +D+E+RD +GV RG Y ++F +LRF R+ + A+ ++ + + +R+ W ++ QR LDGVSVY L DGLV+SH E I+ G P + A
Sbjct: 97 RVIDTLRYDYPRLFVDKPDLSIFREDVELRDESGVRLRGKGAYSKVFDMLRFLRRTGMSDAEVTYHIFVN--DATIRMRWSAKLKLRDPAFGMQRLDILDGVSVYELDSDGLVRSHTLEYIVPRGLEHLMPLSLA 229 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig704.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig704.6.1 >prot_P-wetherbeei_contig704.6.1 ID=prot_P-wetherbeei_contig704.6.1|Name=mRNA_P-wetherbeei_contig704.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=335bp MGTIHLPVFRACTVSIALRFCPKNPRPGTENLNHEPFGNPTFSPSSLPNAback to top mRNA from alignment at P-wetherbeei_contig704:6526..7695- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig704.6.1 ID=mRNA_P-wetherbeei_contig704.6.1|Name=mRNA_P-wetherbeei_contig704.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1170bp|location=Sequence derived from alignment at P-wetherbeei_contig704:6526..7695- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig704:6526..7695- >mRNA_P-wetherbeei_contig704.6.1 ID=mRNA_P-wetherbeei_contig704.6.1|Name=mRNA_P-wetherbeei_contig704.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1005bp|location=Sequence derived from alignment at P-wetherbeei_contig704:6526..7695- (Phaeothamnion wetherbeei SAG_119_79)back to top |