mRNA_P-wetherbeei_contig7038.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7038.1.1 vs. uniprot
Match: A0A836CNH3_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH3_9STRA) HSP 1 Score: 315 bits (807), Expect = 2.030e-98 Identity = 176/244 (72.13%), Postives = 199/244 (81.56%), Query Frame = 1
Query: 1 KLTGSSSSRQIPSYTEHALGGATRSRLASYDSATSIGLPRVVSNRVRLESWEWPGWGSHFKMAVPQGALQEIEATQQEP-PKLGEWEATAICGNDILSSVLYVSGLVTTRAGWLSPVCLLVVAGILYLYRYIYAEAISALPMNGGSYNVLINTASKAVASFAACLAIISYIATGVVSASTAVAYLQTLLPGLAPVWSTVGLLFFFACLTALGISESARLATGMFVLHVFTLAALCVLSGIYGEF 729
KLTG+ ++ +TEH LGG TR RLASYDSAT +GL R VS+RVRLESWE+PGWGSHF+M VPQ L+ IE ++ PKLGEW ATAICGNDILSSVLYVSGLVT+ AGWLSPVCLL+VAG+LYLYR+IY EAISALPMNGGSYNVLINT SKA+ASFAACLAIISYIATGVVSA+TA+AYL+TL P L +TV LLFFFACL GISES+ +A GMFVLHV TL AL V + Y F
Sbjct: 19 KLTGARTNDAPRYHTEHPLGGPTRGRLASYDSAT-LGLSRRVSDRVRLESWEFPGWGSHFRMTVPQDELRLIEEEHEKHHPKLGEWAATAICGNDILSSVLYVSGLVTSSAGWLSPVCLLMVAGLLYLYRFIYGEAISALPMNGGSYNVLINTTSKAIASFAACLAIISYIATGVVSAATAIAYLRTLWPELDAQLATVALLFFFACLMGYGISESSDVALGMFVLHVATLFALAVGAAAYACF 261
BLAST of mRNA_P-wetherbeei_contig7038.1.1 vs. uniprot
Match: D7FXC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC3_ECTSI) HSP 1 Score: 310 bits (793), Expect = 2.620e-95 Identity = 172/242 (71.07%), Postives = 192/242 (79.34%), Query Frame = 1
Query: 1 KLTGSSSSRQ-IPSYTEHALGGATRSRLASYDSATSIGLPRVVSNRVRLESWEWPGWGSHFKMAVPQG-ALQEIEATQQEPPKLGEWEATAICGNDILSSVLYVSGLVTTRAGWLSPVCLLVVAGILYLYRYIYAEAISALPMNGGSYNVLINTASKAVASFAACLAIISYIATGVVSASTAVAYLQTLLPGLAPVWSTVGLLFFFACLTALGISESARLATGMFVLHVFTLAALCVLSGIY 720
KL G S R +YTE LG RSR+ASYDSAT++GLPR VS+RVRLESWE+PGWGSHF M P G AL KLGEW ATAI GNDILSSVLYV+GLVT AGWLSPVCLL+VAGILYLYR+IY EAISALPMNGG+YNVLINT SK VASFAACLA+ISYIATGVVSA+TAV+YLQTL+P + T+GLLFFFACL +GISESA +A GMFV+HVFTL A+CVLS Y
Sbjct: 94 KLKGGSGDRGGTTAYTEGPLGSGARSRMASYDSATTLGLPRRVSSRVRLESWEFPGWGSHFTMNPPPGLALSNPSKDNGGHEKLGEWYATAISGNDILSSVLYVTGLVTGFAGWLSPVCLLMVAGILYLYRFIYGEAISALPMNGGAYNVLINTTSKPVASFAACLAVISYIATGVVSAATAVSYLQTLIPAAGLMTCTIGLLFFFACLMTMGISESAGVALGMFVVHVFTLTAVCVLSACY 335
BLAST of mRNA_P-wetherbeei_contig7038.1.1 vs. uniprot
Match: A0A397BNY9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BNY9_9STRA) HSP 1 Score: 226 bits (576), Expect = 7.090e-69 Identity = 129/220 (58.64%), Postives = 158/220 (71.82%), Query Frame = 1
Query: 61 GATRSRLASYDSATSIGLPRVVSNRVR-LESWEWPGWGSHFKMAVPQGALQEIEAT--QQEPPKLGEWEATAICGNDILSSVLYVSGLVTTRAGWLSPVCLLVVAGILYLYRYIYAEAISALPMNGGSYNVLINTASKAVASFAACLAIISYIATGVVSASTAVAYLQTLLPGLAPVWSTVGLLFFFACLTALGISESARLATGMFVLHVFTLAALCVLS 711
G T ++A+ S ++ G S ++ ++ WE+PGWG + +P L EI AT +E PKL EW ATAICGNDILSS LYVSGLV ++AG L+PV L +VAGILYLYR+IY E ++A+PMNGGSYNVL+NT SK VAS AA LAI+SYIATGVVS ++A YL + PG+ V STVGLLFFFA LT GISESA +A G+FVLH TL LC LS
Sbjct: 8 GLTTDKMAA--SRSTYGSDEETSRSMQHMKPWEFPGWGQVSNVTIPDDKLAEINATLKSREHPKLAEWPATAICGNDILSSCLYVSGLVASKAGKLAPVSLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASVAASLAILSYIATGVVSGTSACTYLASTFPGIPIVGSTVGLLFFFAALTCFGISESAVVALGIFVLHTLTLVTLCGLS 225
BLAST of mRNA_P-wetherbeei_contig7038.1.1 vs. uniprot
Match: A0A3R6ZRY7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZRY7_9STRA) HSP 1 Score: 226 bits (576), Expect = 2.560e-67 Identity = 129/220 (58.64%), Postives = 158/220 (71.82%), Query Frame = 1
Query: 61 GATRSRLASYDSATSIGLPRVVSNRVR-LESWEWPGWGSHFKMAVPQGALQEIEAT--QQEPPKLGEWEATAICGNDILSSVLYVSGLVTTRAGWLSPVCLLVVAGILYLYRYIYAEAISALPMNGGSYNVLINTASKAVASFAACLAIISYIATGVVSASTAVAYLQTLLPGLAPVWSTVGLLFFFACLTALGISESARLATGMFVLHVFTLAALCVLS 711
G T ++A+ S ++ G S ++ ++ WE+PGWG + +P L EI AT +E PKL EW ATAICGNDILSS LYVSGLV ++AG L+PV L +VAGILYLYR+IY E ++A+PMNGGSYNVL+NT SK VAS AA LAI+SYIATGVVS ++A YL + PG+ V STVGLLFFFA LT GISESA +A G+FVLH TL LC LS
Sbjct: 8 GLTTDKMAA--SRSTYGSDEETSRSMQHMKPWEFPGWGQVSNVTIPDDKLAEINATLKSREHPKLAEWPATAICGNDILSSCLYVSGLVASKAGKLAPVSLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASVAASLAILSYIATGVVSGTSACTYLASTFPGIPIVGSTVGLLFFFAALTCFGISESAVVALGIFVLHTLTLVTLCGLS 225
BLAST of mRNA_P-wetherbeei_contig7038.1.1 vs. uniprot
Match: A0A485L902_9STRA (Aste57867_17415 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L902_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.940e-66 Identity = 128/206 (62.14%), Postives = 154/206 (74.76%), Query Frame = 1
Query: 109 GLPRVVSNRVRLES---WEWPGWGSHFKMAVPQGALQEIE--ATQQEPPKLGEWEATAICGNDILSSVLYVSGLVTTRAGWLSPVCLLVVAGILYLYRYIYAEAISALPMNGGSYNVLINTASKAVASFAACLAIISYIATGVVSASTAVAYLQTLLPGLAPVWSTVGLLFFFACLTALGISESARLATGMFVLHVFTLAALCVLS 711
G PR + +RV ++ WE+PGWG + +M + Q L EIE ++E PKL EW ATAICGNDILSS LYVSGLV +AG L+PV L++VAGILYLYR+IY E ++A+PMNGGSYNVL+NT SK VAS AA LAI+SYIATGVVS ++A YL PG+ V STVGLLFFFA LT+LGISESA A G+FV+H TL LC LS
Sbjct: 27 GTPRSMLSRVAAQNVKPWEFPGWGKYVQMNIDQAKLDEIEDDLKKREHPKLSEWPATAICGNDILSSCLYVSGLVAAKAGMLAPVALVIVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASVAASLAILSYIATGVVSGTSACTYLAATFPGVPVVGSTVGLLFFFAVLTSLGISESAIFALGIFVVHTVTLTVLCGLS 232
BLAST of mRNA_P-wetherbeei_contig7038.1.1 vs. uniprot
Match: A0A835YT58_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT58_9STRA) HSP 1 Score: 229 bits (584), Expect = 1.550e-65 Identity = 124/226 (54.87%), Postives = 165/226 (73.01%), Query Frame = 1
Query: 55 LGGATRSRLASYDSATSIG-LPRVVSNRVRLESWEWPGWGSHFKMAVPQGALQEIEATQQEPPKLGEWEATAICGNDILSSVLYVSGLVTTRAGWLSPVCLLVVAGILYLYRYIYAEAISALPMNGGSYNVLINTASKAVASFAACLAIISYIATGVVSASTAVAYLQTLLPGLAPVWSTVGLLFFFACLTALGISESARLATGMFVLHVFTLAALCVLSGIYGEF 729
LGG RS S+ + S L R +++ +ES++ PG+G H+K+ VP G L+ IE + LGEW +TAIC NDILSSV+Y SGLV+ AG L+PVCL +VAG+L+L++ IY EAISALP NGGSYNVL+N SK+VA+ AAC+ ++SY+ TGVVSA++A+AYL + P + V+ TV LL FFACLTA G+SESAR+A G+F LHV TL A+C+LS +Y F
Sbjct: 13 LGGHDRSHSFSHATPDSAHYLIRQTLSKLSVESFQHPGFGRHYKVDVPAGPLELIEGQAKPKHLLGEWMSTAICANDILSSVIYTSGLVSATAGVLAPVCLFIVAGVLHLFKSIYCEAISALPSNGGSYNVLLNATSKSVAALAACVTVLSYVTTGVVSAASAIAYLHVVFPQVHLVYGTVLLLLFFACLTAFGVSESARVAVGIFALHVLTLTAVCLLSSVYVAF 238
BLAST of mRNA_P-wetherbeei_contig7038.1.1 vs. uniprot
Match: A0A7S4DDZ5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDZ5_HETAK) HSP 1 Score: 216 bits (549), Expect = 2.070e-64 Identity = 123/192 (64.06%), Postives = 145/192 (75.52%), Query Frame = 1
Query: 139 RLESWEWPGWGSHFKMAVPQGALQEIEATQQ----EPPKLGEWEATAICGNDILSSVLYVSGLVTTRAGWLSPVCLLVVAGILYLYRYIYAEAISALPMNGGSYNVLINTASKAVASFAACLAIISYIATGVVSASTAVAYLQTLLPGLAPVWSTVGLLFFFACLTALGISESARLATGMFVLHVFTLAALC 702
RLES ++PG+G F + P+ L+ IE Q+ E KL EW TAICGNDILSS LYVSG+VT AG LSPVCL +VAGILYL R++Y EAI+ALPMNGGSYN+L+NTASK VAS AACLAIISYIAT VVS ++AV YL+T++P L T+GLLF FA L LGISESA +A +FV HV TLAALC
Sbjct: 56 RLESHDFPGFGGAFMLKAPEDQLRAIERQQKSRHSEHDKLSEWLTTAICGNDILSSCLYVSGVVTAEAGILSPVCLAMVAGILYLMRFVYGEAITALPMNGGSYNLLLNTASKPVASVAACLAIISYIATAVVSGTSAVEYLKTVVPALDVDTCTIGLLFAFAALAYLGISESAAVALALFVAHVATLAALC 247
BLAST of mRNA_P-wetherbeei_contig7038.1.1 vs. uniprot
Match: A0A024UN93_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UN93_9STRA) HSP 1 Score: 226 bits (576), Expect = 2.350e-64 Identity = 125/209 (59.81%), Postives = 154/209 (73.68%), Query Frame = 1
Query: 94 SATSIGLPRVVSNRVR-LESWEWPGWGSHFKMAVPQGALQEIEAT--QQEPPKLGEWEATAICGNDILSSVLYVSGLVTTRAGWLSPVCLLVVAGILYLYRYIYAEAISALPMNGGSYNVLINTASKAVASFAACLAIISYIATGVVSASTAVAYLQTLLPGLAPVWSTVGLLFFFACLTALGISESARLATGMFVLHVFTLAALCVLS 711
S ++ G S ++ ++ WE+PGWG +++P +L EI A +E PKL EW ATAICGNDILSS LYVSGLV +AG L+PVCL +VAGILYLYR+IY E ++A+PMNGGSYNVL+NT SK VAS AA LAI+SYIATGVVS ++A YL + PG+ V +TVGLLFFFA LT LGISESA +A +FV+H TLA LC LS
Sbjct: 15 SRSTYGSDEETSRSLQHMQPWEFPGWGQVTSVSIPDSSLAEINAALKSREHPKLAEWPATAICGNDILSSCLYVSGLVAAKAGKLAPVCLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASVAASLAILSYIATGVVSGTSACTYLASTFPGIPVVGATVGLLFFFAALTCLGISESAVVALVIFVVHTLTLATLCGLS 223
BLAST of mRNA_P-wetherbeei_contig7038.1.1 vs. uniprot
Match: A0A397AS30_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AS30_9STRA) HSP 1 Score: 224 bits (572), Expect = 9.390e-64 Identity = 125/209 (59.81%), Postives = 152/209 (72.73%), Query Frame = 1
Query: 94 SATSIGLPRVVSNRVR-LESWEWPGWGSHFKMAVPQGALQEIEAT--QQEPPKLGEWEATAICGNDILSSVLYVSGLVTTRAGWLSPVCLLVVAGILYLYRYIYAEAISALPMNGGSYNVLINTASKAVASFAACLAIISYIATGVVSASTAVAYLQTLLPGLAPVWSTVGLLFFFACLTALGISESARLATGMFVLHVFTLAALCVLS 711
S ++ G S ++ ++ WE+PGWG + +P L EI AT +E PKL EW ATAICGNDILSS LYVSGLV ++AG L+PV L +VAGILYLYR+IY E ++A+PMNGGSYNVL+NT SK VAS AA LAI+SYIATGVVS ++A YL + PG+ V ST+GLLFFFA LT GISESA +A G+FVLH TL LC LS
Sbjct: 17 SRSTYGSDEETSRSMQHMKPWEFPGWGQVSNVTIPDDKLAEINATLKSREHPKLAEWPATAICGNDILSSCLYVSGLVASKAGKLAPVSLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASVAASLAILSYIATGVVSGTSACTYLASTFPGIPIVGSTIGLLFFFAALTCFGISESAVVALGIFVLHTLTLVTLCGLS 225
BLAST of mRNA_P-wetherbeei_contig7038.1.1 vs. uniprot
Match: A0A1V9YA40_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YA40_9STRA) HSP 1 Score: 224 bits (571), Expect = 1.160e-63 Identity = 123/195 (63.08%), Postives = 148/195 (75.90%), Query Frame = 1
Query: 142 LESWEWPGWGSHFKMAVPQGALQ--EIEATQQEPPKLGEWEATAICGNDILSSVLYVSGLVTTRAGWLSPVCLLVVAGILYLYRYIYAEAISALPMNGGSYNVLINTASKAVASFAACLAIISYIATGVVSASTAVAYLQTLLPGLAPVWSTVGLLFFFACLTALGISESARLATGMFVLHVFTLAALCVLSGIY 720
L+ W++PGWG + VP L+ E E ++E PKL EW ATAICGNDILSS LYVSGLVT +AG L+PV L +VAGILYLYR+IY E ++A+PMNGGSYNVL+NT SK VAS AA LAI+SYIATGVVS ++A YL + P L V S+VGLLFFFA LT++GISESA A G+F+LH TL ALCV S I+
Sbjct: 42 LKPWDFPGWGKYISTEVPADELRLIEDELKKREHPKLSEWPATAICGNDILSSCLYVSGLVTAKAGKLAPVSLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASIAASLAILSYIATGVVSGTSACTYLSSTFPALPVVPSSVGLLFFFAVLTSMGISESAMFALGIFILHTLTLIALCVASIIF 236 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7038.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7038.1.1 >prot_P-wetherbeei_contig7038.1.1 ID=prot_P-wetherbeei_contig7038.1.1|Name=mRNA_P-wetherbeei_contig7038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=375bp KLTGSSSSRQIPSYTEHALGGATRSRLASYDSATSIGLPRVVSNRVRLESback to top mRNA from alignment at P-wetherbeei_contig7038:1345..3194+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7038.1.1 ID=mRNA_P-wetherbeei_contig7038.1.1|Name=mRNA_P-wetherbeei_contig7038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1850bp|location=Sequence derived from alignment at P-wetherbeei_contig7038:1345..3194+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7038:1345..3194+ >mRNA_P-wetherbeei_contig7038.1.1 ID=mRNA_P-wetherbeei_contig7038.1.1|Name=mRNA_P-wetherbeei_contig7038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1125bp|location=Sequence derived from alignment at P-wetherbeei_contig7038:1345..3194+ (Phaeothamnion wetherbeei SAG_119_79)back to top |