mRNA_P-wetherbeei_contig7032.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7032.1.1 vs. uniprot
Match: B6UYK6_MUSPR (Chitinase n=8 Tax=Musa TaxID=4640 RepID=B6UYK6_MUSPR) HSP 1 Score: 218 bits (556), Expect = 4.680e-66 Identity = 124/277 (44.77%), Postives = 165/277 (59.57%), Query Frame = 1
Query: 130 YTWCGGGAPNPSPSPAVIXXXXXXXXXXXPMPPTGGG-IGKYITATMFANMFPLITPGSSLYNTACTGAGFFTYQSFITAAAVYPAFGMSSDDATNKREIAAFLAQASQETNGANA----GQFNGGLCFKDELGQSTNPGYCVTSTEFPCVAGQYYFGRGPLQLSYNFNYGPAGRALGVDLLANPGAVSNDPILAFKTSLWFWMTPQAPKPSCHDAMIGLTSPS----------GFGATTKVINGGVLQCGNGNPTRSAAEMQKIGYYQAYETVFGL 915
Y WCG N P P P+GGG +G I++++F M + AC G GF+TY +FI AA + FG + DDAT KREIAAFLAQ S ET G A G + G CF E S++ YCV S+++PC AG+ Y+GRGP+Q+S+N+NYGPAGRA+G DLL NP V+ D ++FKT+LWFWMTPQ+PKPSCH+ + G +PS G+G TT +INGG L+CG G+ R A +IG+Y+ Y + G+
Sbjct: 40 YGWCG----NTDPYCGQGCQSQCTGSTPSPSTPSGGGSVGSIISSSLFEQML------KHRNDAACPGNGFYTYNAFIAAANSFSGFGTTGDDATKKREIAAFLAQTSHETTGGWATAPDGPYAWGYCFVQEQNPSSD--YCVASSQWPCAAGKKYYGRGPIQISFNYNYGPAGRAIGSDLLNNPDLVATDATISFKTALWFWMTPQSPKPSCHNVITGGWTPSNADRAAGRLPGYGVTTNIINGG-LECGKGSDARVA---DRIGFYKRYCDLLGV 300
BLAST of mRNA_P-wetherbeei_contig7032.1.1 vs. uniprot
Match: I7AXR1_OLEEU (Putative chitinase I n=2 Tax=Olea europaea TaxID=4146 RepID=I7AXR1_OLEEU) HSP 1 Score: 216 bits (551), Expect = 5.650e-66 Identity = 117/242 (48.35%), Postives = 152/242 (62.81%), Query Frame = 1
Query: 235 GGIGKYITATMFANMFPLITPGSSLYNTACTGAGFFTYQSFITAAAVYPAFGMSSDDATNKREIAAFLAQASQETNGANA----GQFNGGLCFKDELGQSTNPGYCVTSTEFPCVAGQYYFGRGPLQLSYNFNYGPAGRALGVDLLANPGAVSNDPILAFKTSLWFWMTPQAPKPSCHDAMIGLTSPS----------GFGATTKVINGGVLQCGNG-NPTRSAAEMQKIGYYQAYETVFGL 915
GG+ I+ ++F M G+ C GF+TY++FI AA + AFG + D T KREIAAFLAQ S ET G A G ++ G C+K E G P YCV S E+PC G+ YFGRGP+Q+SYN+NYGPAG+A+G DLL +P AV+NDP ++FKT+ WFWMTPQAPKPSCHDAM G+ PS G+G T +INGG+ +CG G NP +IG+Y+ Y + G+
Sbjct: 21 GGVDSIISKSLFDEMLKHRNDGN------CPANGFYTYEAFIAAANSFGAFGTTGDTDTRKREIAAFLAQTSHETTGGWASAPDGPYSWGYCYKQEQGNP--PDYCVASQEWPCAPGKKYFGRGPIQISYNYNYGPAGKAIGSDLLNDPDAVANDPTISFKTAFWFWMTPQAPKPSCHDAMSGVWKPSAADTAAGRVPGYGVVTNIINGGI-ECGKGSNPQME----DRIGFYKRYCDLLGV 249
BLAST of mRNA_P-wetherbeei_contig7032.1.1 vs. uniprot
Match: CHI2_TOBAC (Endochitinase B n=24 Tax=Solanaceae TaxID=4070 RepID=CHI2_TOBAC) HSP 1 Score: 218 bits (555), Expect = 8.620e-66 Identity = 117/248 (47.18%), Postives = 154/248 (62.10%), Query Frame = 1
Query: 217 PMPPTGGGIGKYITATMFANMFPLITPGSSLYNTACTGAGFFTYQSFITAAAVYPAFGMSSDDATNKREIAAFLAQASQETNGANA----GQFNGGLCFKDELGQSTNPG-YCVTSTEFPCVAGQYYFGRGPLQLSYNFNYGPAGRALGVDLLANPGAVSNDPILAFKTSLWFWMTPQAPKPSCHDAMIGLTSPS----------GFGATTKVINGGVLQCGNGNPTRSAAEMQKIGYYQAYETVFGL 915
P PP GG +G I+++MF M + AC G GF++Y +FI AA +P FG S D KREIAAF AQ S ET G A G + G C+ E G +PG YC S ++PC G+ YFGRGP+Q+S+N+NYGP GRA+GVDLL NP V+ DP+++FK++LWFWMTPQ+PKPSCHD +IG PS GFG T +INGG L+CG G +R +IG+Y+ Y ++ G+
Sbjct: 67 PTPPGGGDLGSIISSSMFDQML------KHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG---SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGG-LECGRGTDSRV---QDRIGFYRRYCSILGV 301
BLAST of mRNA_P-wetherbeei_contig7032.1.1 vs. uniprot
Match: A0A7I8K4V0_SPIIN (Chitinase n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K4V0_SPIIN) HSP 1 Score: 218 bits (555), Expect = 9.410e-66 Identity = 116/242 (47.93%), Postives = 159/242 (65.70%), Query Frame = 1
Query: 235 GGIGKYITATMFANMFPLITPGSSLYNTACTGAGFFTYQSFITAAAVYPAFGMSSDDATNKREIAAFLAQASQETNGANA----GQFNGGLCFKDELGQSTNPG-YCVTSTEFPCVAGQYYFGRGPLQLSYNFNYGPAGRALGVDLLANPGAVSNDPILAFKTSLWFWMTPQAPKPSCHDAMIGLTSPS----------GFGATTKVINGGVLQCGNGNPTRSAAEMQKIGYYQAYETVFGL 915
GG+ I+ T+F M + AC F+TY +F+TAA +PAFG + D T +REIAAFL Q S ET G A G ++ G CFK+E+G NPG YC ST++PCV+G+ Y+GRGP+Q+SYN+NYGPAG+A+GV+LL NP V++DP+++FKT+LWFWMTPQ+PKPS HD + G +PS G+G T +INGG L+CG+G+ R A +IG+Y Y +FG+
Sbjct: 84 GGVASIISQTLFDQML------LHRNDAACPANNFYTYSAFVTAANSFPAFGTTGDLTTRQREIAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEVG---NPGDYCQPSTQWPCVSGKKYYGRGPIQISYNYNYGPAGQAIGVNLLNNPDLVTSDPVVSFKTALWFWMTPQSPKPSSHDVITGGWTPSAADVAAGRLPGYGVITNIINGG-LECGHGSDNRVA---DRIGFYNRYCNIFGV 312
BLAST of mRNA_P-wetherbeei_contig7032.1.1 vs. uniprot
Match: A0A6G1EE78_9ORYZ (Chitinase n=2 Tax=Oryza TaxID=4527 RepID=A0A6G1EE78_9ORYZ) HSP 1 Score: 218 bits (556), Expect = 9.420e-66 Identity = 113/214 (52.80%), Postives = 145/214 (67.76%), Query Frame = 1
Query: 319 ACTGAGFFTYQSFITAAAVYPAFGMSSDD-ATNKREIAAFLAQASQETNG----ANAGQFNGGLCFKDELGQSTNPGYCVTSTEFPCVAGQYYFGRGPLQLSYNFNYGPAGRALGVDLLANPGAVSNDPILAFKTSLWFWMTPQAPKPSCHDAMIGLTSPS----------GFGATTKVINGGVLQCGNGNPTRSAAEMQKIGYYQAYETVFGL 915
AC +GF+TY +F+TAAA +P F + DD T KRE+AAFLAQ S ET G A G F+ G CFK+E+G + + YCV E+PC G+ YFGRGP+QLSYN+NYGPAG A+G DLL NP V+ DP+++FKT+LWFWMTPQAPKPSCHD + G +P+ G+G T +INGG L+CG+G R A +IG+YQ Y V G+
Sbjct: 110 ACPASGFYTYDAFVTAAAAFPEFAATGDDDETRKREVAAFLAQTSHETTGGWPTAPDGPFSWGYCFKEEIGPTAD--YCVPIAEWPCAPGKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVATDPVVSFKTALWFWMTPQAPKPSCHDVITGQWTPTSADNAAGRVPGYGVITNIINGG-LECGHGPDDRVA---NRIGFYQRYCDVLGI 317
BLAST of mRNA_P-wetherbeei_contig7032.1.1 vs. uniprot
Match: B8QVI1_ZEAMP (Chitinase (Fragment) n=1 Tax=Zea mays subsp. parviglumis TaxID=76912 RepID=B8QVI1_ZEAMP) HSP 1 Score: 217 bits (552), Expect = 2.040e-65 Identity = 112/247 (45.34%), Postives = 153/247 (61.94%), Query Frame = 1
Query: 217 PMPPTGGGIGKYITATMFANMFPLITPGSSLYNTACTGAGFFTYQSFITAAAVYPAFGMSSDDATNKREIAAFLAQASQETNGANA----GQFNGGLCFKDELGQSTNPGYCVTSTEFPCVAGQYYFGRGPLQLSYNFNYGPAGRALGVDLLANPGAVSNDPILAFKTSLWFWMTPQAPKPSCHDAMIGLTSPS----------GFGATTKVINGGVLQCGNGNPTRSAAEMQKIGYYQAYETVFGL 915
P PP+ GG+ I ++F M + AC GF+TY FI AA +P FG + KRE+AAFLAQ S ET G A G + G CFK+E G ++ P YC S ++PC AG+ Y+GRGP+Q+SYN+NYGPAG+A+G +LANP V+ DP ++F+T++WFWMTPQ+PKPSCHD M G +PS G+G T +INGG L+CG+G +R A +IG+Y+ Y + G+
Sbjct: 66 PNPPSSGGVASIIPESLFNQML------LHRNDAACPANGFYTYAGFIAAANAFPGFGTTGAPDVQKRELAAFLAQTSHETTGGWATAPDGPYAWGYCFKEEQGGASGPDYCEPSAQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVATDPTVSFETAVWFWMTPQSPKPSCHDVMTGQWTPSAADTAANRLPGYGVVTNIINGG-LECGHGADSRVA---DRIGFYKRYCDLLGV 302
BLAST of mRNA_P-wetherbeei_contig7032.1.1 vs. uniprot
Match: A0A5C7HSX1_9ROSI (Chitin-binding type-1 domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HSX1_9ROSI) HSP 1 Score: 217 bits (552), Expect = 2.360e-65 Identity = 125/289 (43.25%), Postives = 162/289 (56.06%), Query Frame = 1
Query: 112 CASVPSY------TWCGGGAPNPSPSPAVIXXXXXXXXXXXPMPPTGGGIGKYITATMFANMFPLITPGSSLYNTACTGAGFFTYQSFITAAAVYPAFGMSSDDATNKREIAAFLAQASQETNG----ANAGQFNGGLCFKDELGQSTNPG-YCVTSTEFPCVAGQYYFGRGPLQLSYNFNYGPAGRALGVDLLANPGAVSNDPILAFKTSLWFWMTPQAPKPSCHDAMIGLTSPS----------GFGATTKVINGGVLQCGNGNPTRSAAEMQKIGYYQAYETVFGL 915
C S P Y + CGG P+PS GG IG I+ F M + C GF++Y +FI AA +PAF + D T KRE+AAFLAQ S ET G A G ++ G CFK E G NPG YCV + ++PC G+ YFGRGP+Q+SYN+NYGPAGRA+ DLL NP AV+NDP ++FKT+ WFWMTPQ+PKPSCHD +IG PS G+G T +INGG+ +CG G+ + A +IG+Y+ Y + G+
Sbjct: 50 CGSTPDYCTNGCQSQCGGSPSTPTPS------------------GVGGDIGSIISRDRFEQMLKHRNDAN------CPARGFYSYDAFIAAAKSFPAFATNGDADTRKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKQEQG---NPGDYCVPNQQWPCAPGKKYFGRGPIQISYNYNYGPAGRAINADLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVIIGAWRPSAADTQAGRVPGYGVITNIINGGI-ECGKGSNPQMA---DRIGFYKRYCDILGI 307
BLAST of mRNA_P-wetherbeei_contig7032.1.1 vs. uniprot
Match: Q6SPQ7_BAMOL (Chitinase n=1 Tax=Bambusa oldhamii TaxID=58923 RepID=Q6SPQ7_BAMOL) HSP 1 Score: 217 bits (552), Expect = 3.250e-65 Identity = 139/311 (44.69%), Postives = 179/311 (57.56%), Query Frame = 1
Query: 43 CGSCTNCYYSPTLACFSGWTQAQCASVPSY------TWCGGGAPNPSPSPAVIXXXXXXXXXXXPMPPTGGGIGKYITATMFANMFPLITPGSSLYNTACTGAGFFTYQSFITAAAVYPAFGMSSDDATNKREIAAFLAQASQETNG----ANAGQFNGGLCFKDELGQSTNPGYCVTSTEFPCVAGQYYFGRGPLQLSYNFNYGPAGRALGVDLLANPGAVSNDPILAFKTSLWFWMTPQAPKPSCHDAMIGLTSPS----------GFGATTKVINGGVLQCGNGNPTRSAAEMQKIGYYQAYETVFGL 915
CGS P C S W C S Y + C G P+P P+P XXXXXXXXXXX G+ ++ +F + + AC GF+TY +F+ AA +P FG + DD T KRE+AAFL Q S ET G A G ++ G CFK+E+G + YCV STE+PC + YFGRGP+QLSYN+NYGPAG+A+G DLL NP V+ DP+++FKT+LWFWMTPQAPKPSCHD G +PS G+G T +INGG L+CG G R + +IG+YQ Y + G+
Sbjct: 23 CGSQAGGATCPDCLCCSQW--GYCGSTADYCGDGCQSQCDGCGPSPVPTPXXXXXXXXXXXXXX------XGVASIVSRDLFEQLL------LHRNDPACPAKGFYTYDAFVAAADAFPDFGTTGDDETRKREVAAFLGQTSHETTGGWPTAPGGPYSWGYCFKEEIGATAT--YCVPSTEWPCAPDKKYFGRGPIQLSYNYNYGPAGKAIGEDLLNNPELVAADPVVSFKTALWFWMTPQAPKPSCHDVATGQWTPSSVDIAAGRVPGYGVITNIINGG-LECGFGPDDRV---VNRIGFYQRYCDILGV 313
BLAST of mRNA_P-wetherbeei_contig7032.1.1 vs. uniprot
Match: A0A3Q7JDI3_SOLLC (Chitin-binding type-1 domain-containing protein n=4 Tax=Solanum TaxID=4107 RepID=A0A3Q7JDI3_SOLLC) HSP 1 Score: 216 bits (550), Expect = 4.580e-65 Identity = 130/293 (44.37%), Postives = 163/293 (55.63%), Query Frame = 1
Query: 94 GW---TQAQCASVPSYTWCGGGAPNPSPSPAVIXXXXXXXXXXXPMPPTGGGIGKYITATMFANMFPLITPGSSLYNTACTGAG-FFTYQSFITAAAVYPAFGMSSDDATNKREIAAFLAQASQETNG----ANAGQFNGGLCFKDELGQSTNPG-YCVTSTEFPCVAGQYYFGRGPLQLSYNFNYGPAGRALGVDLLANPGAVSNDPILAFKTSLWFWMTPQAPKPSCHDAMIGLTSPS----------GFGATTKVINGGVLQCGNGNPTRSAAEMQKIGYYQAYETVFGL 915
GW T C S + C GG P P P TGG +G I+ +MF M S C G F++Y +FITAA +P FG S D KREIAAF AQ S ET G A G F G CF E G NPG YC S+++PC G+ YFGRGP+Q+S+N+NYGP GRA+GVDLL NP V+ DP+++FKT++WFWMTPQ+PKPSCHD +IG +PS GFG T +INGG L+CG GN R +IG+Y+ Y + G+
Sbjct: 46 GWCGNTNDHCGSGNCQSQCPGGGPGPGPV-------------------TGGDLGSVISNSMFDQMLKHRNENS------CQGKNNFYSYNAFITAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWPSAPDGPFAWGYCFLRERG---NPGDYCSPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTAIWFWMTPQSPKPSCHDVIIGRWNPSAGDRSANRLPGFGVITNIINGG-LECGRGNDNRV---QDRIGFYRRYCGILGV 306
BLAST of mRNA_P-wetherbeei_contig7032.1.1 vs. uniprot
Match: A0A7N0T0P7_KALFE (Chitin-binding type-1 domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0T0P7_KALFE) HSP 1 Score: 216 bits (551), Expect = 6.110e-65 Identity = 117/245 (47.76%), Postives = 152/245 (62.04%), Query Frame = 1
Query: 226 PTGGGIGKYITATMFANMFPLITPGSSLYNTACTGAGFFTYQSFITAAAVYPAFGMSSDDATNKREIAAFLAQASQETNGANA----GQFNGGLCFKDELGQSTNPG-YCVTSTEFPCVAGQYYFGRGPLQLSYNFNYGPAGRALGVDLLANPGAVSNDPILAFKTSLWFWMTPQAPKPSCHDAMIGLTSPS----------GFGATTKVINGGVLQCGNGNPTRSAAEMQKIGYYQAYETVFGL 915
P GG + I+ F M G AC F+TY +FI AA + FG S D AT KRE+AAFLAQ S ET G A G ++ G C+K E G NPG YCV S ++PC G+ Y+GRGP+Q+SYN+NYGPAG+A+GV+LLANP V+ DP ++FKT++WFWMTPQ+PKPSCH+ MIG PS G+G T +INGG L+CG+G R A +IG+Y+ Y + G+
Sbjct: 89 PGGGDVASLISRDTFNQMLKHRNDG------ACPARNFYTYDAFIAAARAFNGFGTSGDVATRKRELAAFLAQTSHETTGGWATAPDGPYSWGYCYKQEQG---NPGSYCVASQQWPCAPGKKYYGRGPMQISYNYNYGPAGQAIGVNLLANPDLVATDPTISFKTAIWFWMTPQSPKPSCHNVMIGSWQPSAADRAAGRVSGYGVVTNIINGG-LECGHGQDARVA---DRIGFYKRYCDILGV 320 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7032.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7032.1.1 >prot_P-wetherbeei_contig7032.1.1 ID=prot_P-wetherbeei_contig7032.1.1|Name=mRNA_P-wetherbeei_contig7032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=305bp VTAQPVTAPTTTSGCGSCTNCYYSPTLACFSGWTQAQCASVPSYTWCGGGback to top mRNA from alignment at P-wetherbeei_contig7032:1728..2909+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7032.1.1 ID=mRNA_P-wetherbeei_contig7032.1.1|Name=mRNA_P-wetherbeei_contig7032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1182bp|location=Sequence derived from alignment at P-wetherbeei_contig7032:1728..2909+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7032:1728..2909+ >mRNA_P-wetherbeei_contig7032.1.1 ID=mRNA_P-wetherbeei_contig7032.1.1|Name=mRNA_P-wetherbeei_contig7032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=915bp|location=Sequence derived from alignment at P-wetherbeei_contig7032:1728..2909+ (Phaeothamnion wetherbeei SAG_119_79)back to top |