mRNA_P-wetherbeei_contig7019.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7019.1.1
Unique NamemRNA_P-wetherbeei_contig7019.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7019.1.1 vs. uniprot
Match: M4B9E7_HYAAE (Non-specific serine/threonine protein kinase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B9E7_HYAAE)

HSP 1 Score: 68.2 bits (165), Expect = 8.320e-9
Identity = 55/187 (29.41%), Postives = 85/187 (45.45%), Query Frame = 3 
Query:   78 GSCSAYSGGSEPDPRVSYAVYKHMWAAGDQKEALTHLEAFTDGLAARVIGGAIRSSSPPRDGSSDTVRGXXXXXXXGYNGXXXXXXXXXXGPVDARLRCVLVRCLRLCSQWKLEL----LERAGGEAVAAALPEADRRVIQRWLQTATELEPANYKAWHAWALFNYRLAEDLDAQRQVTAAARLAAV 626
            GS S +  G +   RV++A  KH+WAAG ++EAL+ L               IR S+  R  S  T          G +G           P+      +LV+C    ++W+L +    +E    E+V ++L            +  TEL+P NYKAWHAWAL N+++ E     + ++A A  +AV
Sbjct: 2106 GSVSTFGFGEKDRNRVAFAYLKHLWAAGQKQEALSDLHHLV-----------IRISATARQRSQATS---------GLSGMSSTAPAML--PLKNEGEELLVKCHLKMAEWQLAIHDQQIEHVPVESVLSSL------------RLCTELDPRNYKAWHAWALMNFQVVEHSTHSQHISANATASAV 2258
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BLAST of mRNA_P-wetherbeei_contig7019.1.1 vs. uniprot
Match: A0A662WIE3_9STRA (Non-specific serine/threonine protein kinase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIE3_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 8.340e-9
Identity = 55/189 (29.10%), Postives = 88/189 (46.56%), Query Frame = 3 
Query:   90 AYSGGSEPDPRVSYAVYKHMWAAGDQKEALTHLEAFTDGLAARVIGGAIRSSSPPRDGSSDTVRGXXXXXXXGYNGXXXXXXXXXXGPVDARLRCVLVRCLRLCSQWKLEL----LERAGGEAVAAALPEADRRVIQRWLQTATELEPANYKAWHAWALFNYRLAEDLDAQRQVTAAAR-LAAVANAAV 641
            A+  G +   RV++A  KH+WAAG +++ALT L      L  R+   A + S  P                 G  G           P+ +    +LV+C    ++W+L +    L+    ++V A+L            +  TELEP +YKAWHAWAL N+++ E     + ++A A  LA+ A+A+V
Sbjct: 2153 AFGLGEKDRNRVAFAYLKHLWAAGQKRDALTDLHR----LVTRISSSARQRSQSP--------------GGVGLYGASPPSPAPAMMPIRSEEEELLVKCHLKMAEWQLAVHDQQLDHVPVDSVLASL------------RLCTELEPRSYKAWHAWALMNFQVVEHSTHSQHLSATATALASSASASV 2311
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BLAST of mRNA_P-wetherbeei_contig7019.1.1 vs. uniprot
Match: A0A1V9Z7W7_9STRA (Serine/threonine-protein kinase TOR (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z7W7_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.610e-7
Identity = 52/174 (29.89%), Postives = 79/174 (45.40%), Query Frame = 3 
Query:   57 FSYVGYQGSCSAYSGGSEPDP-RVSYAVYKHMWAAGDQKEALTHLEAFTDGLAARVIGGAIRSSSPPRDGSSDTVRGXXXXXXXGYNGXXXXXXXXXXGPVDARLRCVLVRCLRLCSQWKLELLERAGGEAVAAALPEADRRVIQRWLQTATELEPANYKAWHAWALFNYRLAE 575
            FS +GY          SE D  RV++A  KH+WA G++ +AL  L      L+        R ++PP       + G        + G          G   A     +V+C    ++W++ + E+       AA+  A        L+T+TELEP++YKAWHAWAL N+ +AE
Sbjct: 1831 FSTLGY----------SEKDHHRVAFAYLKHLWAVGEKHKALQELGTLVQTLS--------RRAAPP-------LAGTFRVSFYAHVGVGVV------GAAVANQDGDIVKCHLKWAEWQMAIHEQQLDRVPIAAVLSA--------LKTSTELEPSSYKAWHAWALMNFHVAE 1965
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BLAST of mRNA_P-wetherbeei_contig7019.1.1 vs. uniprot
Match: A0A1S8VDX8_9FUNG (FAT domain-containing protein (Fragment) n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VDX8_9FUNG)

HSP 1 Score: 58.5 bits (140), Expect = 6.750e-6
Identity = 45/160 (28.12%), Postives = 69/160 (43.12%), Query Frame = 3 
Query:  117 PRVSYAVYKHMWAAGDQKEALTHLEAFTDGLAARVIGGAIRSSSPPRDGSSDTVRGXXXXXXXGYNGXXXXXXXXXXGPVDARLRCVLVRCLRLCSQWKLELLERAGGEAVAAALPEADRRVIQRWLQTATELEPANYKAWHAWALFNYRLAEDLDAQRQ 596
            P V YA  KH+WA G ++ A   ++ FT+GL ++ +GG+ R+       +S+T  G                         + L   L RC      W++ L +    E     +PE     I R    AT+ +   YKAWHAWAL N+++    + Q Q
Sbjct:   14 PSVVYACLKHLWATGQREAAYVQMKEFTNGLVSK-LGGSPRNDLALHLDASNTKDGV------------------------SSLSSQLARCFLKLGDWQIALND----EITDDIIPE-----ILRSYLAATQCDRDWYKAWHAWALANFKVLVHHEKQHQ 139
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BLAST of mRNA_P-wetherbeei_contig7019.1.1 vs. uniprot
Match: A0A2J6Q9Z0_9HELO (Serine/threonine-protein kinase TOR n=1 Tax=Hyaloscypha hepaticicola TaxID=2082293 RepID=A0A2J6Q9Z0_9HELO)

HSP 1 Score: 56.6 bits (135), Expect = 4.420e-5
Identity = 53/165 (32.12%), Postives = 76/165 (46.06%), Query Frame = 3 
Query:  105 SEPDPRVSYAVYKHMWAAGDQKEALTHLEAFTDGLAARVIGGAIRS-SSPPRDGSSDTVR---GXXXXXXXGY--NGXXXXXXXXXXGPVDARLRCVLVRCLRLCSQWKLELLERAGGEAVAAALPEADRRVIQRWLQTATELEPANYKAWHAWALFNYRLAEDL 581
            S P P V YAV K+ WAAG Q  AL  L  FT  LAA V    IR+ +    +G++D +    G       G+  N               A    +L RC     +W++  L+   G+ + +  P+    ++  + Q+AT   P  YKAWHAWAL N+ L + L
Sbjct: 1574 SIPAP-VQYAVLKYHWAAGKQDPALDALRVFTAELAAHVD--QIRAVAQGGLNGAADVLSINGGVSNMSLNGFDPNSPGGAGSLAMSNKSLAEHTMLLARCCLKQGEWQIIQLK---GDWLES--PDHVGEILSSY-QSATYFNPTWYKAWHAWALANFELVQQL 1729
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7019.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
M4B9E7_HYAAE8.320e-929.41Non-specific serine/threonine protein kinase n=1 T... [more]
A0A662WIE3_9STRA8.340e-929.10Non-specific serine/threonine protein kinase n=2 T... [more]
A0A1V9Z7W7_9STRA2.610e-729.89Serine/threonine-protein kinase TOR (Fragment) n=1... [more]
A0A1S8VDX8_9FUNG6.750e-628.13FAT domain-containing protein (Fragment) n=1 Tax=B... [more]
A0A2J6Q9Z0_9HELO4.420e-532.12Serine/threonine-protein kinase TOR n=1 Tax=Hyalos... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7019contigP-wetherbeei_contig7019:44..1035 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FYJ6
Preferred nameTOR1
PFAMsDUF3385,FAT,FATC,FRB_dom,PI3_PI4_kinase
Model size993
Max annot lvl2759|Eukaryota
KEGG koko:K07203
KEGG Pathwayko01521,ko01522,ko04012,ko04066,ko04072,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map04012,map04066,map04072,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.37e-15
EggNOG OGsCOG5032@1|root,KOG0891@2759|Eukaryota
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
Cds size990
COG categoryBDLTU
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186952.6669488-CDS-P-wetherbeei_contig7019:43..10331683186952.6669488-CDS-P-wetherbeei_contig7019:43..1033Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7019 44..1033 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186952.6791582-UTR-P-wetherbeei_contig7019:1033..10351683186952.6791582-UTR-P-wetherbeei_contig7019:1033..1035Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7019 1034..1035 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7019.1.1prot_P-wetherbeei_contig7019.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7019 44..1033 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7019.1.1

>prot_P-wetherbeei_contig7019.1.1 ID=prot_P-wetherbeei_contig7019.1.1|Name=mRNA_P-wetherbeei_contig7019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=330bp
MPYISEADMYGRGGGVAAFSYVGYQGSCSAYSGGSEPDPRVSYAVYKHMW
AAGDQKEALTHLEAFTDGLAARVIGGAIRSSSPPRDGSSDTVRGGGYYGG
GGYNGGYCGGYGYGGGPVDARLRCVLVRCLRLCSQWKLELLERAGGEAVA
AALPEADRRVIQRWLQTATELEPANYKAWHAWALFNYRLAEDLDAQRQVT
AAARLAAVANAAVESAVAGGAKVGSGGGEPAVDAEIGDGGGGSLERTNAA
TVPWIITGVEIDGVTTSTGGVPASAGFGPGGGGSAPAPIPAPPPPTPPPP
VLEEAAGSVEAPTVLSPRPGGVYYGSAGAR
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mRNA from alignment at P-wetherbeei_contig7019:44..1035-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7019.1.1 ID=mRNA_P-wetherbeei_contig7019.1.1|Name=mRNA_P-wetherbeei_contig7019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=992bp|location=Sequence derived from alignment at P-wetherbeei_contig7019:44..1035- (Phaeothamnion wetherbeei SAG_119_79)
AAATGCCCTACATCAGCGAAGCGGACATGTACGGCAGGGGCGGCGGCGTC
GCTGCTTTTTCGTACGTCGGGTACCAAGGCAGCTGCAGCGCCTACAGCGG
CGGCTCGGAGCCGGACCCGCGCGTGTCTTACGCCGTCTACAAGCACATGT
GGGCTGCAGGCGACCAAAAGGAAGCCCTGACACACCTCGAAGCCTTCACG
GACGGCCTCGCCGCCCGCGTGATTGGCGGCGCTATCCGCTCCTCTTCTCC
GCCGCGCGACGGGAGCAGCGACACCGTCCGCGGCGGTGGTTATTATGGTG
GCGGCGGTTACAATGGCGGTTACTGCGGCGGTTACGGCTACGGCGGCGGA
CCGGTGGACGCGCGGCTGCGATGCGTGCTGGTGCGCTGCCTGCGACTGTG
CAGCCAGTGGAAGCTGGAGCTTTTGGAGCGGGCGGGCGGCGAGGCGGTGG
CGGCGGCGCTGCCGGAGGCCGACCGTCGCGTGATCCAGCGGTGGCTGCAG
ACAGCCACGGAGCTTGAGCCGGCTAACTACAAGGCGTGGCACGCCTGGGC
GCTCTTCAACTACCGCCTCGCAGAGGATTTGGACGCGCAGCGGCAGGTCA
CCGCGGCGGCGCGCCTTGCTGCGGTCGCGAATGCCGCCGTGGAAAGTGCT
GTTGCTGGTGGTGCTAAAGTCGGCAGCGGCGGCGGTGAACCCGCTGTCGA
TGCAGAAATCGGCGATGGCGGCGGGGGATCGCTGGAGCGGACGAACGCGG
CGACGGTGCCATGGATCATCACTGGGGTCGAGATTGACGGCGTCACGACG
TCGACGGGCGGCGTGCCGGCATCGGCGGGCTTCGGGCCCGGCGGCGGCGG
AAGCGCGCCCGCTCCGATTCCCGCGCCGCCTCCCCCGACGCCGCCGCCGC
CGGTTCTCGAAGAGGCGGCGGGCAGCGTCGAAGCGCCGACTGTCCTGTCG
CCGCGGCCGGGAGGTGTCTACTATGGCAGCGCCGGAGCCAGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7019:44..1035-

>mRNA_P-wetherbeei_contig7019.1.1 ID=mRNA_P-wetherbeei_contig7019.1.1|Name=mRNA_P-wetherbeei_contig7019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=990bp|location=Sequence derived from alignment at P-wetherbeei_contig7019:44..1035- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCTACATCAGCGAAGCGGACATGTACGGCAGGGGCGGCGGCGTCGC
TGCTTTTTCGTACGTCGGGTACCAAGGCAGCTGCAGCGCCTACAGCGGCG
GCTCGGAGCCGGACCCGCGCGTGTCTTACGCCGTCTACAAGCACATGTGG
GCTGCAGGCGACCAAAAGGAAGCCCTGACACACCTCGAAGCCTTCACGGA
CGGCCTCGCCGCCCGCGTGATTGGCGGCGCTATCCGCTCCTCTTCTCCGC
CGCGCGACGGGAGCAGCGACACCGTCCGCGGCGGTGGTTATTATGGTGGC
GGCGGTTACAATGGCGGTTACTGCGGCGGTTACGGCTACGGCGGCGGACC
GGTGGACGCGCGGCTGCGATGCGTGCTGGTGCGCTGCCTGCGACTGTGCA
GCCAGTGGAAGCTGGAGCTTTTGGAGCGGGCGGGCGGCGAGGCGGTGGCG
GCGGCGCTGCCGGAGGCCGACCGTCGCGTGATCCAGCGGTGGCTGCAGAC
AGCCACGGAGCTTGAGCCGGCTAACTACAAGGCGTGGCACGCCTGGGCGC
TCTTCAACTACCGCCTCGCAGAGGATTTGGACGCGCAGCGGCAGGTCACC
GCGGCGGCGCGCCTTGCTGCGGTCGCGAATGCCGCCGTGGAAAGTGCTGT
TGCTGGTGGTGCTAAAGTCGGCAGCGGCGGCGGTGAACCCGCTGTCGATG
CAGAAATCGGCGATGGCGGCGGGGGATCGCTGGAGCGGACGAACGCGGCG
ACGGTGCCATGGATCATCACTGGGGTCGAGATTGACGGCGTCACGACGTC
GACGGGCGGCGTGCCGGCATCGGCGGGCTTCGGGCCCGGCGGCGGCGGAA
GCGCGCCCGCTCCGATTCCCGCGCCGCCTCCCCCGACGCCGCCGCCGCCG
GTTCTCGAAGAGGCGGCGGGCAGCGTCGAAGCGCCGACTGTCCTGTCGCC
GCGGCCGGGAGGTGTCTACTATGGCAGCGCCGGAGCCAGA
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