mRNA_P-wetherbeei_contig7003.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7003.2.1
Unique NamemRNA_P-wetherbeei_contig7003.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7003.2.1 vs. uniprot
Match: A0A6H5L3W8_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W8_9PHAE)

HSP 1 Score: 322 bits (824), Expect = 1.110e-97
Identity = 144/196 (73.47%), Postives = 172/196 (87.76%), Query Frame = 1
Query:  250 FLFLGDYVDRGAFSCEVLLYLLSLKLRYPERVHLLRGNHECRSLTTHFGFKEECKAKYGLPVYYRFIRCFEMLPLSAIVSNDHGRYFCTHGGISPDLQRIEQIRALERYAEPQMSGLLCDLLWADPSDDPGVTGSDELSDADADAVLSGSFVFNRLRGCSVSFGCAAAERFLAENALLCIVRAHAVQEGGYYRHFE 837
            +LFLGDYVDRG FSCEVLLYLL+LK+ +P +VHL+RGNHECRSLTTHFGFK+ECK+KYGLPVYYRF+RCFE++PL A+++NDHGRYFCTHGGISPDL  ++QI AL+R AEP+M GLLCDLLWADPSDDPGVT  + LSD + D++L+ +F FNRLRGCSV+FG  A  RFL  N L+C++RAHAVQE GYYRHFE
Sbjct:  132 YLFLGDYVDRGEFSCEVLLYLLALKVAHPMKVHLIRGNHECRSLTTHFGFKDECKSKYGLPVYYRFLRCFELMPLCAVIANDHGRYFCTHGGISPDLTSLDQIAALDRRAEPEMEGLLCDLLWADPSDDPGVTNIESLSDQELDSLLNSTFQFNRLRGCSVAFGYLAVRRFLDNNHLMCVIRAHAVQEDGYYRHFE 327          
BLAST of mRNA_P-wetherbeei_contig7003.2.1 vs. uniprot
Match: D7FVC2_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC2_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 1.410e-97
Identity = 144/196 (73.47%), Postives = 171/196 (87.24%), Query Frame = 1
Query:  250 FLFLGDYVDRGAFSCEVLLYLLSLKLRYPERVHLLRGNHECRSLTTHFGFKEECKAKYGLPVYYRFIRCFEMLPLSAIVSNDHGRYFCTHGGISPDLQRIEQIRALERYAEPQMSGLLCDLLWADPSDDPGVTGSDELSDADADAVLSGSFVFNRLRGCSVSFGCAAAERFLAENALLCIVRAHAVQEGGYYRHFE 837
            +LFLGDYVDRG FSCEVLLYLL+LK+ +P +VHL+RGNHECRSLTTHFGFK+ECK+KYGLPVYYRF+RCFE++PL A+++NDHGRYFCTHGGISPDL  ++QI AL R AEP+M GLLCDLLWADPSDDPGVT  + LSD + D++L+ +F FNRLRGCSV+FG  A  RFL  N L+C++RAHAVQE GYYRHFE
Sbjct:  235 YLFLGDYVDRGEFSCEVLLYLLALKVAHPMKVHLIRGNHECRSLTTHFGFKDECKSKYGLPVYYRFLRCFELMPLCAVIANDHGRYFCTHGGISPDLTSLDQIAALNRRAEPEMEGLLCDLLWADPSDDPGVTNIESLSDQELDSLLNSTFQFNRLRGCSVAFGYLAVRRFLDNNHLMCVIRAHAVQEDGYYRHFE 430          
BLAST of mRNA_P-wetherbeei_contig7003.2.1 vs. uniprot
Match: A0A835Z1Z6_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z6_9STRA)

HSP 1 Score: 293 bits (751), Expect = 1.630e-95
Identity = 143/202 (70.79%), Postives = 161/202 (79.70%), Query Frame = 1
Query:  235 GERTRFLFLGDYVDRGAFSCEVLLYLLSLKLRYPERVHLLRGNHECRSLTTHFGFKEECKAKYGLPVYYRFIRCFEMLPLSAIVSNDHGRYFCTHGGISPDLQRIEQIRALERYAEPQMSGLLCDLLWADPSDDPGVTGSD-ELSDADADAVLSGSFVFNRLRGCSVSFGCAAAERFLAENALLCIVRAHAVQEGGYYRHFE 837
            GE   FLFLGDYVDRGA+SCEV+LYLLSLKL YP+ VHLLRGNHECRSLT HFGFK ECKAKYGLPVYYRF+R FE LPL A+V++D GRY C HGG+SPDL  IE++ AL+R  EP MSG LCDLLWADP+DDPG       ++ A+  A+L   F  NRLRGCSVSFG AAA  FL  N LLC++RAHAVQEGGYYRHFE
Sbjct:   50 GEPGGFLFLGDYVDRGAYSCEVMLYLLSLKLAYPKHVHLLRGNHECRSLTGHFGFKAECKAKYGLPVYYRFLRLFEELPLCAVVTSDVGRYLCAHGGLSPDLASIEEVDALQRRGEPPMSGPLCDLLWADPADDPGCCPPPGRMTTAELGALLGAQFAPNRLRGCSVSFGYAAAVEFLERNDLLCLIRAHAVQEGGYYRHFE 251          
BLAST of mRNA_P-wetherbeei_contig7003.2.1 vs. uniprot
Match: A0A835YV28_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV28_9STRA)

HSP 1 Score: 291 bits (746), Expect = 2.300e-94
Identity = 140/207 (67.63%), Postives = 164/207 (79.23%), Query Frame = 1
Query:  220 EKSGGGERTRFLFLGDYVDRGAFSCEVLLYLLSLKLRYPERVHLLRGNHECRSLTTHFGFKEECKAKYGLPVYYRFIRCFEMLPLSAIVSNDHGRYFCTHGGISPDLQRIEQIRALERYAEPQMSGLLCDLLWADPSDDPGVTG-SDELSDADADAVLSGSFVFNRLRGCSVSFGCAAAERFLAENALLCIVRAHAVQEGGYYRHFE 837
            E  G GE   +LFLGDYVDRGA+SCEV+LYLL+LKL +P+ VHLLRGNHECR+LT HFGFKEECK KYGLPVYYRF+R FE LPL+A+V+NDHGRY C HGG+SP+L  I+ + AL+R  EP M G LCDLLWADPSDDP     +  L+ A  + VL  +F FN+LRGCSV+FG +AA +FL  N LLCIVRAHAVQE GYYRHFE
Sbjct:   83 EGDGEGEGGTYLFLGDYVDRGAYSCEVMLYLLALKLAHPDHVHLLRGNHECRALTGHFGFKEECKGKYGLPVYYRFVRVFEELPLAALVTNDHGRYLCAHGGLSPELATIDAVDALDRRTEPPMDGPLCDLLWADPSDDPSTCPPAAALNAAALETVLGDTFAFNKLRGCSVTFGYSAAVKFLEANDLLCIVRAHAVQENGYYRHFE 289          
BLAST of mRNA_P-wetherbeei_contig7003.2.1 vs. uniprot
Match: A0A4D9CPK7_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPK7_9STRA)

HSP 1 Score: 243 bits (620), Expect = 3.400e-69
Identity = 123/204 (60.29%), Postives = 150/204 (73.53%), Query Frame = 1
Query:  244 TRFLFLGDYVDRGAFSCEVLLYLLSLKLRYPERVHLLRGNHECRSLTTHFGFKEECKAKYGLPVYYRFIRCFEMLPLSAIVSNDHGRYFCTHGGISPDLQRIEQIRALERYAEPQMSGLLCDLLWADP----SDDPGVTG--SDELSDADA-DAVLSGSFVFNRLRGCSVSFGCAAAERFLAENALLCIVRAHAVQEGGYYRHF 834
            +RFLFLGDYVDRGA+SCEVLLYLL+LK+ YP+ +HLLRGNHE R  TT+FGFKEECKAKYGLPVYYRF+  FE LPL A+V  D+GR F  HGGISP++Q + +I+ ++R+ EP  SG LCDLLWADP      DPG+ G  +D+   A A +  L+  +  N  RGCSV FG  A  RFL +N LLC++RAH VQE GY  HF
Sbjct:  364 SRFLFLGDYVDRGAYSCEVLLYLLALKVAYPDLIHLLRGNHETRGATTYFGFKEECKAKYGLPVYYRFLLVFESLPLCAVVETDYGRLFACHGGISPEIQTLAEIQRIDRFVEPGASGSLCDLLWADPWHEKKVDPGINGDATDKEQVARAWEEYLAVEWRPNGERGCSVYFGYRAIRRFLDDNHLLCLIRAHQVQEEGYSEHF 567          
BLAST of mRNA_P-wetherbeei_contig7003.2.1 vs. uniprot
Match: A0A836CLD0_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD0_9STRA)

HSP 1 Score: 220 bits (560), Expect = 3.920e-67
Identity = 105/196 (53.57%), Postives = 140/196 (71.43%), Query Frame = 1
Query:  253 LFLGDYVDRGAFSCEVLLYLLSLKLRYPERVHLLRGNHECRSLTTHFGFKEECKAKYGLPVYYRFIRCFEMLPLSAIVSNDHGRYFCTHGGISPDLQRIEQIRALERYAEPQMSGLLCDLLWADPSDDPGVTGSDELSDADADAVLSGSFVFNRLRGCSVSFGCAAAERFLAENALLCIVRAHAVQEGGYYRHFEA 840
            LFLGDYVDRGAFSCEV+L LL+LKLR+P  V LLRGNHEC +++ HFGFKEECK KYGL VYY+F+RCF+ LP++A++    GR F  HGGISPD++ ++++  ++R+AEP M G LCD+LW+DP ++       +L+D +   V         +RGCS  FG  A  RFL +NAL+ ++RAH VQE G+  HF A
Sbjct:   40 LFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDPLNEDEAY---KLTDQEYKEVC--------VRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFAA 224          
BLAST of mRNA_P-wetherbeei_contig7003.2.1 vs. uniprot
Match: H3G693_PHYRM (Serine/threonine-protein phosphatase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G693_PHYRM)

HSP 1 Score: 209 bits (532), Expect = 2.480e-63
Identity = 99/196 (50.51%), Postives = 135/196 (68.88%), Query Frame = 1
Query:  247 RFLFLGDYVDRGAFSCEVLLYLLSLKLRYPERVHLLRGNHECRSLTTHFGFKEECKAKYGLPVYYRFIRCFEMLPLSAIVSNDHGRYFCTHGGISPDLQRIEQIRALERYAEPQMSGLLCDLLWADPSDDPGVTGSDELSDADADAVLSGSFVFNRLRGCSVSFGCAAAERFLAENALLCIVRAHAVQEGGYYRHF 834
            + +FLGDYVDRGAFSCEV+LYLL LK+R+ ++V LLRGNHEC S+++ +GF+ EC+ KYG+ VYY F+ CF+ +P++AI+S   GR  C HGGISP+L+ IE I+ ++R  E   +G+LCDLLW+DP    GV         DA+     S+  N+ RGCS  F  AA   FLA+N LL ++RAH  ++ GY  HF
Sbjct:   30 QLVFLGDYVDRGAFSCEVMLYLLLLKIRFSDKVVLLRGNHECESISSFYGFRSECRVKYGISVYYHFLSCFQAMPVAAILSTSRGRIMCVHGGISPELKTIEDIQKIDRRREVPTTGILCDLLWSDPQTPHGVQ-------VDAEVGTRASWEPNQARGCSYYFNAAAMFEFLADNQLLSLLRAHEYEDEGYMFHF 218          
BLAST of mRNA_P-wetherbeei_contig7003.2.1 vs. uniprot
Match: A0A418B8B2_9STRA (Serine/threonine-protein phosphatase (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B8B2_9STRA)

HSP 1 Score: 213 bits (543), Expect = 4.110e-63
Identity = 107/207 (51.69%), Postives = 138/207 (66.67%), Query Frame = 1
Query:  220 EKSGGGERTRFLFLGDYVDRGAFSCEVLLYLLSLKLRYPERVHLLRGNHECRSLTTHFGFKEECKAKYGLPVYYRFIRCFEMLPLSAIV--SNDHGRYFCTHGGISPDLQRIEQIRALERYAEPQMSGLLCDLLWADPSDDPGVTGSDELSDADADAVLSGSFVFNRLRGCSVSFGCAAAERFLAENALLCIVRAHAVQEGGYYRHF 834
            + S G      LFLGDYVDRGAFSCEV+L+LL +K  YP RV+LLRGNHEC ++++ +GF+ ECKAKYGL VYY F +CF  LPL+A+V  S+D  R FC H G+SP L+ +  I A+ER  EP  SG LCDLLW+DP  +       E S +D D+ ++G F    +RGCS  + C A   FL  N L+C+VRAH +Q+ GY  HF
Sbjct:   33 QPSFGDSGNTLLFLGDYVDRGAFSCEVMLFLLCMKTHYPSRVYLLRGNHECEAISSFYGFRMECKAKYGLSVYYHFTQCFHALPLAAVVTASSDGHRVFCVHAGLSPSLKTLADIDAIERRQEPTTSGPLCDLLWSDPVPEY------EDSTSDTDSTVNGVFCNIPVRGCSFYYSCTAVYDFLTANDLMCMVRAHELQDEGYLFHF 233          
BLAST of mRNA_P-wetherbeei_contig7003.2.1 vs. uniprot
Match: D8LKX8_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX8_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 5.520e-63
Identity = 103/194 (53.09%), Postives = 139/194 (71.65%), Query Frame = 1
Query:  253 LFLGDYVDRGAFSCEVLLYLLSLKLRYPERVHLLRGNHECRSLTTHFGFKEECKAKYGLPVYYRFIRCFEMLPLSAIVSNDHGRYFCTHGGISPDLQRIEQIRALERYAEPQMSGLLCDLLWADPSDDPGVTGSDELSDADADAVLSGSFVFNRLRGCSVSFGCAAAERFLAENALLCIVRAHAVQEGGYYRHF 834
            LFLGDYVDRG FSCEV+L+L +LKLR+P+ V L+RGNHEC S++ HFGFK+ECK KYGL VYYRF+  F+ +P+ A++    GR F  HGGISPD++ +  I  ++R+AEP+M G LCD+LWADP ++     S +L+  +    L   ++ N++RGCS  FG  A +RFL EN L+ +VRAH VQE G+  HF
Sbjct:  260 LFLGDYVDRGQFSCEVILHLFALKLRHPKNVFLIRGNHECSSVSAHFGFKDECKMKYGLTVYYRFLLAFQTMPICALIETSIGRIFACHGGISPDIRHLSDIEEIDRFAEPEMEGPLCDMLWADPLNEDD---SHKLTGEEYQHFLDTDYISNQVRGCSYMFGYHAVQRFLRENRLMYMVRAHEVQEEGFRSHF 450          
BLAST of mRNA_P-wetherbeei_contig7003.2.1 vs. uniprot
Match: A0A6H5L564_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L564_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 7.310e-63
Identity = 104/194 (53.61%), Postives = 140/194 (72.16%), Query Frame = 1
Query:  253 LFLGDYVDRGAFSCEVLLYLLSLKLRYPERVHLLRGNHECRSLTTHFGFKEECKAKYGLPVYYRFIRCFEMLPLSAIVSNDHGRYFCTHGGISPDLQRIEQIRALERYAEPQMSGLLCDLLWADPSDDPGVTGSDELSDADADAVLSGSFVFNRLRGCSVSFGCAAAERFLAENALLCIVRAHAVQEGGYYRHF 834
            LFLGDYVDRG FSCEV+L+L +LKLR+P+ V L+RGNHEC S++ HFGFK+ECK KYGL VYYRF+  F+ +P+ A++    GR F  HGGISPD+Q +  I  ++R+AEP+M G LCD+LWADP ++     S +L+  +    L  +++ N++RGCS  FG  A +RFL EN L+ +VRAH VQE G+  HF
Sbjct:  299 LFLGDYVDRGQFSCEVILHLFALKLRHPKNVFLIRGNHECSSVSAHFGFKDECKVKYGLTVYYRFLLAFQTMPICALIETSIGRIFACHGGISPDIQHLSDIEEIDRFAEPEMEGPLCDMLWADPLNEDD---SHKLTGEEYQHFLDTNYISNQVRGCSYMFGYHAVQRFLRENRLMYMVRAHEVQEEGFRSHF 489          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7003.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3W8_9PHAE1.110e-9773.47Serine/threonine-protein phosphatase n=1 Tax=Ectoc... [more]
D7FVC2_ECTSI1.410e-9773.47Serine/threonine-protein phosphatase n=1 Tax=Ectoc... [more]
A0A835Z1Z6_9STRA1.630e-9570.79Serine/threonine-protein phosphatase n=1 Tax=Tribo... [more]
A0A835YV28_9STRA2.300e-9467.63Serine/threonine-protein phosphatase n=1 Tax=Tribo... [more]
A0A4D9CPK7_9STRA3.400e-6960.29Serine/threonine-protein phosphatase n=1 Tax=Nanno... [more]
A0A836CLD0_9STRA3.920e-6753.57Serine/threonine-protein phosphatase n=1 Tax=Tribo... [more]
H3G693_PHYRM2.480e-6350.51Serine/threonine-protein phosphatase n=1 Tax=Phyto... [more]
A0A418B8B2_9STRA4.110e-6351.69Serine/threonine-protein phosphatase (Fragment) n=... [more]
D8LKX8_ECTSI5.520e-6353.09Serine/threonine-protein phosphatase n=1 Tax=Ectoc... [more]
A0A6H5L564_9PHAE7.310e-6353.61Serine/threonine-protein phosphatase n=1 Tax=Ectoc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7003contigP-wetherbeei_contig7003:590..2322 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FVC2
PFAMsEF-hand_7,Metallophos
Model size905
Max annot lvl2759|Eukaryota
KEGG koko:K04348,ko:K04460
KEGG Pathwayko04010,ko04020,ko04022,ko04114,ko04218,ko04310,ko04360,ko04370,ko04380,ko04650,ko04658,ko04659,ko04660,ko04662,ko04720,ko04724,ko04728,ko04921,ko04922,ko04924,ko05010,ko05014,ko05031,ko05152,ko05166,ko05167,map04010,map04020,map04022,map04114,map04218,map04310,map04360,map04370,map04380,map04650,map04658,map04659,map04660,map04662,map04720,map04724,map04728,map04921,map04922,map04924,map05010,map05014,map05031,map05152,map05166,map05167
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.32e-98
EggNOG OGsCOG0639@1|root,KOG0375@2759|Eukaryota
EC3.1.3.16
Descriptioncalcium-dependent protein serine/threonine phosphatase activity
Cds size903
COG categoryT
BRITEko00000,ko00001,ko01000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186951.671335-CDS-P-wetherbeei_contig7003:590..7541683186951.671335-CDS-P-wetherbeei_contig7003:590..754Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7003 591..754 -
1683186951.684955-CDS-P-wetherbeei_contig7003:914..10981683186951.684955-CDS-P-wetherbeei_contig7003:914..1098Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7003 915..1098 -
1683186951.697817-CDS-P-wetherbeei_contig7003:1445..15801683186951.697817-CDS-P-wetherbeei_contig7003:1445..1580Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7003 1446..1580 -
1683186951.7099698-CDS-P-wetherbeei_contig7003:1902..23221683186951.7099698-CDS-P-wetherbeei_contig7003:1902..2322Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7003 1903..2322 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7003.2.1prot_P-wetherbeei_contig7003.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7003 591..2322 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7003.2.1

>prot_P-wetherbeei_contig7003.2.1 ID=prot_P-wetherbeei_contig7003.2.1|Name=mRNA_P-wetherbeei_contig7003.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=301bp
GSGGGGDSAGSCGSGGSAASSPVGSIASFFRSSKRMGSFFGSVSSKEAAD
AAAAAAATDASAATAAAAIAAEAEKSGGGERTRFLFLGDYVDRGAFSCEV
LLYLLSLKLRYPERVHLLRGNHECRSLTTHFGFKEECKAKYGLPVYYRFI
RCFEMLPLSAIVSNDHGRYFCTHGGISPDLQRIEQIRALERYAEPQMSGL
LCDLLWADPSDDPGVTGSDELSDADADAVLSGSFVFNRLRGCSVSFGCAA
AERFLAENALLCIVRAHAVQEGGYYRHFEALRARRQARDAEAVATETAAA
A
back to top

mRNA from alignment at P-wetherbeei_contig7003:590..2322-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7003.2.1 ID=mRNA_P-wetherbeei_contig7003.2.1|Name=mRNA_P-wetherbeei_contig7003.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1733bp|location=Sequence derived from alignment at P-wetherbeei_contig7003:590..2322- (Phaeothamnion wetherbeei SAG_119_79)
GGCAGCGGTGGCGGCGGCGACAGCGCCGGCAGCTGTGGCAGCGGCGGCAG TGCCGCCAGCAGCCCGGTCGGCAGCATTGCGTCCTTCTTCCGCAGCTCGA AGCGCATGGGCAGCTTTTTTGGCAGTGTCAGCAGCAAAGAGGCCGCCGAT GCCGCGGCGGCCGCTGCCGCCACCGATGCCAGCGCCGCGACCGCTGCGGC CGCCATTGCAGCGGAGGCCGAGAAGAGCGGCGGCGGCGAGAGAACACGCT TCCTCTTCCTGGGGGACTACGTGGACCGCGGCGCTTTTTCGTGCGAGGTG TTGCTGTACCTGCTGAGCCTGAAGCTGCGGTACCCGGAGAGGGTGCACCT GCTGCGGGGCAACCACGAGTGCCGCAGCCTGACGACCCACTTCGGTTTTA AGGAGGAGTGCAAGGCCAAGGTGAGAAGATGTGGTTTCGCTGTTACGGTG TGCTTCTTTCTGTTACGGCGCACTTCTCGCAGCTACAGGTGGTTATGGTG TCACATAATTCTTGTGAGTTGGTGCTTCAGCCGTACAGGTGCCGGTGCTG ACGGAGACTAATGCTCTGTACATTAGCAAAAGCGCCTGTTTAGATTAAGA AGGAGAGAAACGTGTTAGGCTGCCTACGGCCCGATTAAACGCTCTGTTCT GTTCTGGAGGACCTTGTCCATTTCCTCTATGCTTTTTCCTGTTCTGGCTG ACACCGCAATCCTTCTTCCTGCTTGTGTTTCCATCTACGCAGTACGGGCT GCCCGTCTACTACCGGTTCATCAGATGTTTCGAGATGCTGCCGCTTTCGG CCATCGTGTCCAACGACCACGGCCGCTACTTCTGCACCCACGGCGGCATC TCCCCCGACCTCCAGAGGATAGAACAGGCGAGCGAGCGGCTTTGGGGGAA TCACGAGGAAATTGGCGAAGAGGGGCAGCTTTTTCTTGCCATTTTCGACT TTCCTTTATCTCTGCCGCAGGAAGCGTCGCTTCAAATGTGTTACGGCCAT CGATGGGGCGCTGGGTTGCCAGGGTTGGCGCAGACGATTCTTCAACTGCT TCAGCGTTTCTGCGTTGCCCCATAGTGTCGTGCTACCGCTGTCTCGCTTG TCATTGGCGTGTAGATTTCCGCATCGGAGTGTTCATTGCTTTCCTGACTC TTGCTCGCTTCCGACGTTCCACTGCTCTCCGCCGGCGGTAATGAAAAACC CGAAACTGCCGGAAGTGCCTGCAGATTCGCGCGCTGGAGCGCTATGCGGA GCCGCAAATGTCGGGGCTGCTCTGTGACCTCCTGTGGGCGGACCCATCAG ACGACCCGGGCGTGACCGGCTCGGACGAGCTGTCGGACGCCGACGCCGAC GCCGTCTTGTCCGGGAGCTTCGTCTTCAACCGTCTCCGCGGCTGCAGCGT CAGCTTCGGTGAGACGGCGATTTCCGTCTTTCTTTGTCTTCGTGGCTCGT AGAGCTAATCGAACCTGACAGCTAGCCACCAGAGGTGGGTTTGCCACCTC AAATCTCCTTTCCACTTTCGTTGCTTACGCATTTGTCATACTTTCCCCGC CACTGTAAACTTTGTCAGGCTGCGCCGCGGCGGAGCGCTTTCTGGCGGAA AACGCGCTGCTCTGCATCGTGCGGGCGCATGCCGTGCAGGAGGGCGGCTA CTACCGCCACTTTGAGGCGTTGCGGGCGCGGCGGCAGGCGCGGGACGCAG AAGCGGTGGCGACCGAAACGGCAGCGGCGGCGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig7003:590..2322-

>mRNA_P-wetherbeei_contig7003.2.1 ID=mRNA_P-wetherbeei_contig7003.2.1|Name=mRNA_P-wetherbeei_contig7003.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=903bp|location=Sequence derived from alignment at P-wetherbeei_contig7003:590..2322- (Phaeothamnion wetherbeei SAG_119_79)
GGCAGCGGTGGCGGCGGCGACAGCGCCGGCAGCTGTGGCAGCGGCGGCAG
TGCCGCCAGCAGCCCGGTCGGCAGCATTGCGTCCTTCTTCCGCAGCTCGA
AGCGCATGGGCAGCTTTTTTGGCAGTGTCAGCAGCAAAGAGGCCGCCGAT
GCCGCGGCGGCCGCTGCCGCCACCGATGCCAGCGCCGCGACCGCTGCGGC
CGCCATTGCAGCGGAGGCCGAGAAGAGCGGCGGCGGCGAGAGAACACGCT
TCCTCTTCCTGGGGGACTACGTGGACCGCGGCGCTTTTTCGTGCGAGGTG
TTGCTGTACCTGCTGAGCCTGAAGCTGCGGTACCCGGAGAGGGTGCACCT
GCTGCGGGGCAACCACGAGTGCCGCAGCCTGACGACCCACTTCGGTTTTA
AGGAGGAGTGCAAGGCCAAGTACGGGCTGCCCGTCTACTACCGGTTCATC
AGATGTTTCGAGATGCTGCCGCTTTCGGCCATCGTGTCCAACGACCACGG
CCGCTACTTCTGCACCCACGGCGGCATCTCCCCCGACCTCCAGAGGATAG
AACAGATTCGCGCGCTGGAGCGCTATGCGGAGCCGCAAATGTCGGGGCTG
CTCTGTGACCTCCTGTGGGCGGACCCATCAGACGACCCGGGCGTGACCGG
CTCGGACGAGCTGTCGGACGCCGACGCCGACGCCGTCTTGTCCGGGAGCT
TCGTCTTCAACCGTCTCCGCGGCTGCAGCGTCAGCTTCGGCTGCGCCGCG
GCGGAGCGCTTTCTGGCGGAAAACGCGCTGCTCTGCATCGTGCGGGCGCA
TGCCGTGCAGGAGGGCGGCTACTACCGCCACTTTGAGGCGTTGCGGGCGC
GGCGGCAGGCGCGGGACGCAGAAGCGGTGGCGACCGAAACGGCAGCGGCG
GCG
back to top