mRNA_P-wetherbeei_contig7.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7.6.1
Unique NamemRNA_P-wetherbeei_contig7.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7.6.1 vs. uniprot
Match: A0A836CMU8_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU8_9STRA)

HSP 1 Score: 331 bits (849), Expect = 5.490e-98
Identity = 203/428 (47.43%), Postives = 251/428 (58.64%), Query Frame = 1
Query:    1 VGWAGKEAVVATGGGELYLFKGAEIAAVVAAHRGSINALHTAAD-GRIATGGADGVVNVWSSGLEKIATADLAVLLQNGAGSCGRNAAAAYKAEAIATAGAAVPAAADSNSVRSVCISPNGGKVLVGTLGSELFELSLNGSGNGRGGDGSNGRERAMTALHGGEPLVRGHWRDELWGLAAHPTAREYSTCGDDRTLRVWSVAGRRQLRSADLGGMARCCAYHPAGGAFLAVGMGGSVGRG---RQKCDGVVKFFRDDRPGRSGXXXXXXXXXGALVLLPAAELHDTKQWISDVRFSPDGRTLAVASHDHGVYLYAVTVATDGASLTCRKRARFGKHNSYVTHLDFSADSQHLRSTCGAYELLFSEAATGAQVTSARALRDAVWSSTTCPLGWEVQGIWPPCADGTDVNAVDRSASGVVLATADDFGCV 1272
            V +AG +AVV T GGE+Y+F           H   +     AA   ++  GG  GV+ +W  G    A +    L+ +                        +P +A S +VRS+ +SP+G ++LVGT   EL+E+ +  +        S G   A       EPLVRGH   ELWGLAAHP+  EY T GDD+TLRVW VA +RQL +A+LGG AR CAY P G A +AVGMGG   RG   +Q+CDG VK F  +R    G         G + L    EL D KQWISD++FSPDG+TLAV SHD+ VYLY+V           ++RA+F KHNSY+TH DFS DS HLRS CGAYELLFS   TGAQVT A +LRD  W++ TC LGW VQGIWPPCADGTD+NAVDRS  G +LATADD G V
Sbjct: 1269 VRYAGPDAVVGTSGGEVYVFS----------HIKHLELNSNAAGLAQLYAGGKGGVIAIWEIGTGIFAKSTRRTLMSS-----------------------PLPGSAGS-AVRSIYLSPDGSQLLVGTQDCELWEVPVTAAI-------STGNNTAAGLKDCEEPLVRGHHSGELWGLAAHPSEGEYCTAGDDQTLRVWDVASKRQLCAANLGGAARACAYSPDG-ALVAVGMGGGGARGGSGKQRCDGAVKVF--ERSVNGG---------GQVALRLLHELRDAKQWISDIKFSPDGKTLAVGSHDNCVYLYSV-------EQQFQRRAKFAKHNSYITHTDFSEDSAHLRSNCGAYELLFSATDTGAQVTRAASLRDTRWATCTCTLGWPVQGIWPPCADGTDINAVDRSHGGTLLATADDMGKV 1636          
BLAST of mRNA_P-wetherbeei_contig7.6.1 vs. uniprot
Match: A0A7S1C976_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C976_9STRA)

HSP 1 Score: 290 bits (743), Expect = 2.700e-86
Identity = 185/427 (43.33%), Postives = 240/427 (56.21%), Query Frame = 1
Query:    7 WAGKEAVVATGGGELYLFKGAEIAAVVAAHRGSINALHTAADGRIATGGADGVVNVWSSGLEKIATADLAVLLQNGAGSCGRNAAAAYKAEAIATAGAAVPAAADSNSVRSVCISPNGGKVLVGTLGSELFELSLNGSGNGRGGDGSNGRERAMTALHGGEPLVRGHWRDELWGLAAHPTAREYSTCGDDRTLRVWSVAGRRQLRSADLGGMARCCAYHPAGGAFLAVGMGGSVGRGRQKCDGVVKFFRDDRPGRSGXXXXXXXXXGALVLLPA--AELH---DTKQWISDVRFSPDGRTLAVASHDHGVYLYAVTVATDGASLTCRKRARFGKHNSYVTHLDFSADSQHLRSTCGAYELLFSEAATGAQVTSARALRDAVWSSTTCPLGWEVQGIWPPCADGTDVNAVDRSASGVVLATADDFGCV 1272
            + G+ A++ +  G LY F G  +   V AH G++ A+HT   G I +GG DG V +W+  + ++A  D+A L                        G+  P      SVRSVC      K+LVGT+GSE++E++          DG N        LH G PL++GH++ ELWGLA HPT +EY T GDD TLR W VA R+ L   DLG MAR   Y P G   +A+G+GG VGRGR+         RD + G            G +VL  +  A LH   D +QWISD+++SPDG TLA+ SHD+ +YLY V+        T   +    KHNSY+TH DFS DS  ++S CGAYELLF  + TG Q+ SA +LRD  W++ TC LGW VQGIWP  ADGTD+NAV RS  G +LATADDFG V
Sbjct:  488 YVGESALIGSADGHLYRFSGNSLEQAVKAHDGAVYAIHTTKSG-IVSGGKDGRVKLWTPDIAEVAEFDMASL------------------------GSVRP------SVRSVCWDTANKKILVGTIGSEIYEINST--------DGEN--------LHHG-PLIQGHFKYELWGLAVHPTKQEYVTVGDDGTLRRWDVATRKILSVQDLGVMARAVCYSPDG-TQIALGLGGDVGRGRKG--------RDRKDG------------GFIVLNESDLAVLHQARDARQWISDIKYSPDGHTLALGSHDNKIYLYDVS--------TFHLKGTCAKHNSYITHFDFSVDSSTIQSNCGAYELLFFNSETGDQIPSATSLRDKEWATWTCVLGWPVQGIWPAFADGTDINAVARSDDGKLLATADDFGNV 837          
BLAST of mRNA_P-wetherbeei_contig7.6.1 vs. uniprot
Match: A0A418APL5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418APL5_9STRA)

HSP 1 Score: 262 bits (670), Expect = 6.280e-80
Identity = 151/317 (47.63%), Postives = 191/317 (60.25%), Query Frame = 1
Query:  331 VRSVCISPNGGKVLVGTLGSELFELSLNGSGNGRGGDGSNGRERAMTALHGGEPLVRGHWRDELWGLAAHPTAREYSTCGDDRTLRVWSVAGRRQLRSADLGGMARCCAYHPAGGAF-LAVGMGGSVGRGRQKC--DGVVKFFRDDRPGRSGXXXXXXXXXGALVLLPAAELHDTKQWISDVRFSPDGRTLAVASHDHGVYLYAVTVATDGASLTCRKRARFGKHNSYVTHLDFSADSQHLRSTCGAYELLFSEAATGAQVTSARALRDAVWSSTTCPLGWEVQGIWPPCADGTDVNAVDRSASGVVLATADDFGCV 1272
            VRSVC + +  ++L+GT GS++ +    G+             +A         + +GH +DELWGLA HPT  E+ T GDD TLRVWS   R QLR   L  +AR CAY   G  F +AVG GG +G G++K   +G +  FRD                 A       E   +K+WIS+++FSPD   LAV SHD+ +YLYAV      A  T  K+  F  HNSY+THLDFS+DS++++S CGAYELLFS+A TG QVTSAR+LRD  W S TC LGW VQGIWP CADGTD+NAVDRS S  ++AT DDFG V
Sbjct:   65 VRSVCFNSDHTRILLGTSGSDVVQFDRMGT-------------KATV-------VTQGHSQDELWGLAVHPTKPEFCTVGDDMTLRVWSTEHRLQLRMKALDCVARACAYSNGGAPFCIAVGYGGRIGSGKKKHQKEGGLVVFRD-----------------ADTFDVLYEDKPSKEWISEIKFSPDNSILAVGSHDNAIYLYAVVA---NAKFTKMKKM-FRGHNSYITHLDFSSDSKYIQSNCGAYELLFSDATTGKQVTSARSLRDVKWDSWTCALGWPVQGIWPTCADGTDINAVDRSHSCDLVATGDDFGHV 340          
BLAST of mRNA_P-wetherbeei_contig7.6.1 vs. uniprot
Match: A0A2D4CF65_PYTIN (Microtubule-associated protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF65_PYTIN)

HSP 1 Score: 270 bits (689), Expect = 1.180e-78
Identity = 180/431 (41.76%), Postives = 226/431 (52.44%), Query Frame = 1
Query:   13 GKEAVVATGGGELYLFKGAEIAAVVAAHRGSINALHTAADGRIATGGADGVVNVWSSGLEKIA----TADLAVLLQNGAGSCGRNAAAAYKAEAIATAGAAVPAAADSNSVRSVCISPNGGKVLVGTLGSELFELSLNGSGNGRGGDGSNGRERAMTALHGGEPLVRGHWRDELWGLAAHPTAREYSTCGDDRTLRVWSVAGRRQLRSADLGGMARCCAYHPAGGAFLAVGMGGSVGRGRQKCDGVVKFFRDDRPGRSGXXXXXXXXXGALVLLPAAEL-------HDTKQWISDVRFSPDGRTLAVASHDHGVYLYAVTVATDGASLTCRKRARFGKHNSYVTHLDFSADSQHLRSTCGAYELLFSEAATGAQVTSARALRDAVWSSTTCPLGWEVQGIWPPCADGTDVNAVDRSASGVVLATADDFGCV 1272
            G + +V T  G LY F G E+++V+ AH  ++ ALH   +G + +G  DG V+VW   L+ +A      DL    Q            AY A                  VRS C+S +   +L GTL SE++E+           D   GR     AL      V GH+R E WGLA HP+  E  + GDD+TLR+W++  RR++RSA L   AR CAY P G   +AVG+G          DG          G S          G  ++L A EL       +D K+W+SDV+FSPDG+ LAVASHD  VYLY V            KR  F KH SY+TH+DFS+D QHL+STCGAYE LFSE  T   VT+A +LRD  W + TC LGW VQGIW   +DGTDVNAVDRS  G  LAT DDFG V
Sbjct:  463 GSDVLVGTNDGSLYRFAGNELSSVIKAHSAAVFALHYH-NGSLVSGSKDGQVSVWDDKLKLVAGPFQIKDLTTATQP-----------AYFA------------------VRSCCLSRDKSSILFGTLASEIYEI-----------DAKTGRSVGEYAL------VTGHFRGETWGLATHPSKPECCSVGDDQTLRLWNLETRREIRSASLPLSARACAYSPDG-KMIAVGLG---------ADGAAA-------GSSKGASKVRLPAGGFLVLSATELGKLKDACYDPKKWVSDVKFSPDGKVLAVASHDTSVYLYDVLHGF-------AKRHVFRKHASYLTHIDFSSDGQHLQSTCGAYEFLFSEVKTARHVTNASSLRDERWHTMTCTLGWAVQGIWEEGSDGTDVNAVDRSHDGSFLATGDDFGKV 822          
BLAST of mRNA_P-wetherbeei_contig7.6.1 vs. uniprot
Match: A0A2D4C2Z3_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2Z3_PYTIN)

HSP 1 Score: 273 bits (697), Expect = 1.180e-77
Identity = 179/427 (41.92%), Postives = 231/427 (54.10%), Query Frame = 1
Query:   13 GKEAVVATGGGELYLFKGAEIAAVVAAHRGSINALHTAADGRIATGGADGVVNVWSSGLEKIATADLAVLLQNGAGSCGRNAAAAYKAEAIATAGAAVPAAADSNSVRSVCISPNGGKVLVGTLGSELFELSLNGSGNGRGGDGSNGRERAMTALHGGEPLVRGHWRDELWGLAAHPTAREYSTCGDDRTLRVWSVAGRRQLRSADLGGMARCCAYHPAGGAFLAVGMGGSVGRGRQKCDGVVKFFRDDRPGRSGXXXXXXXXXGALVLLPAAEL-------HDTKQWISDVRFSPDGRTLAVASHDHGVYLYAVTVATDGASLTCRKRARFGKHNSYVTHLDFSADSQHLRSTCGAYELLFSEAATGAQVTSARALRDAVWSSTTCPLGWEVQGIWPPCADGTDVNAVDRSASGVVLATADDFGCV 1272
            G + +V T  G LY F G E+++V+ AH  ++ ALH   +G + +G  DG V+VW   L+ +A                      ++ + + T  A  PA     +VRS C+S +   +LVGTL SE++E+           D   GR     AL      V GH+R E WGLA HP+  E  + GDD+TLR+W++  RR++RSA L   AR CAY P G   +AVG+G          DG          G S          G  ++L A EL       +D K+W+SDV+FSPDG+ LAVASHD  VYLY V            KR  F KH SY+TH+DFS+D QHL+STCGAYELLFSE  T   VT+A +LRD  W + TC LGW VQGIW   +DGTDVNA+DRS  G  LAT DDFG V
Sbjct:  670 GSDVLVGTNDGSLYRFAGNELSSVIKAHSAAVFALHYH-NGSLVSGSKDGQVSVWDDKLKLVAGP--------------------FQIKELTT--ATQPAYF---AVRSCCLSRDKSSILVGTLASEIYEI-----------DAKTGRSVGEYAL------VTGHFRGETWGLATHPSKPECCSVGDDQTLRLWNLETRREIRSASLPLAARACAYSPDG-KMIAVGLG---------ADGAAA-------GSSKGASKVRLPAGGFLVLSATELGKLKEACYDPKKWVSDVKFSPDGKVLAVASHDTSVYLYDVLHGF-------AKRHVFRKHASYLTHIDFSSDGQHLQSTCGAYELLFSEVKTARHVTNASSLRDERWHTMTCTLGWAVQGIWEEGSDGTDVNAIDRSHDGSFLATGDDFGKV 1029          
BLAST of mRNA_P-wetherbeei_contig7.6.1 vs. uniprot
Match: A0A0W8DHH5_PHYNI (HELP domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DHH5_PHYNI)

HSP 1 Score: 261 bits (667), Expect = 5.070e-77
Identity = 160/428 (37.38%), Postives = 230/428 (53.74%), Query Frame = 1
Query:   13 GKEAVVATGGGELYLFKGAEIAAVVAAHRGSINALHT--------AADGRIATGGADGVVNVWSSGLEKIATADLAVLLQNGAGSCGRNAAAAYKAEAIATAGAAVPAAADSNSVRSVCISPNGGKVLVGTLGSELFELSLNGSGNGRGGDGSNGRERAMTALHGGEPLVRGHWRDELWGLAAHPTAREYSTCGDDRTLRVWSVAGRRQLRSADLGGMARCCAYHPAGGAFLAVGMGGSVGRGRQKCDGVVKFFRDDRPGRSGXXXXXXXXXGALVLLPAAELHDTKQWISDVRFSPDGRTLAVASHDHGVYLYAVTVATDGASLTCRKRARFGKHNSYVTHLDFSADSQHLRSTCGAYELLFSEAATGAQVTSARALRDAVWSSTTCPLGWEVQGIWPPCADGTDVNAVDRSASGVVLATADDFGCV 1272
            G + V  T GGELY+++G +++  V AH G +  + +         +   + +GG DG V +W++  + +   DL  +     GS G+                          + SV ++  G K+LVGT  S++ E+ +                 + + L+GG+PL  GH+  ELWGLA HP+ RE+ T GDDRTLRVW +  +R +++  L   AR CAY P     LAVG GG  G  +++     +     R G            G LV     E    K+WISDV+FSP+G  LA+ SHD+ +YLY+V     GAS   +KR  F KHNSY+TH DFS D ++++S CGAYE LF + A+ +QV+ A ++RD  W++ TC LGW VQGIWP CADGTD+NAV  S++  +LA+ DD G V
Sbjct:  280 GGDFVTGTAGGELYVWRGNDLSRAVKAHDGDVRVVASMRSTDNSAGSSAVVLSGGKDGRVVMWNAAYQSLKCFDLGAMQ---VGSFGKF-------------------------INSVYLNSTGRKLLVGTCSSDIIEIDV----------------ASGSVLNGGQPLFSGHFAMELWGLAVHPSQREFVTVGDDRTLRVWDMEAKRLIQARLLPAKARACAYSPDS-ELLAVGFGGDNGVRQRRKPASKQGQAQSREGGFAVLRARDLDTGTLVF----EDKPAKEWISDVKFSPNGDILALGSHDNSIYLYSVG---SGAS-EFKKRKPFSKHNSYITHFDFSDDGKYIQSNCGAYEYLFCDTASSSQVSRASSVRDVHWATWTCTLGWPVQGIWPDCADGTDINAVCASSTRTILASGDDSGNV 654          
BLAST of mRNA_P-wetherbeei_contig7.6.1 vs. uniprot
Match: K3WHU2_GLOUD (EF-hand domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHU2_GLOUD)

HSP 1 Score: 270 bits (689), Expect = 1.270e-76
Identity = 163/441 (36.96%), Postives = 229/441 (51.93%), Query Frame = 1
Query:   13 GKEAVVATGGGELYLFKGAEIAAVVAAHRGSINALHT-------------AADGRIATGGADGVVNVWSSGLEKIATADLAVLLQNGAGSCGRNAAAAYKAEAIATAGAAVPAAADSNSVRSVCISPNGGKVLVGTLGSELFELSLNGSGNGRGGDGSNGRERAMTALHGGEPLVRGHWRDELWGLAAHPTAREYSTCGDDRTLRVWSVAGRRQLRSADLGGMARCCAYHPAGGAFLAVGMGGSVGRGRQKCDGVVKFFRDDRPGRSGXXXXXXXXXGALVLLPAA--------ELHDTKQWISDVRFSPDGRTLAVASHDHGVYLYAVTVATDGASLTCRKRARFGKHNSYVTHLDFSADSQHLRSTCGAYELLFSEAATGAQVTSARALRDAVWSSTTCPLGWEVQGIWPPCADGTDVNAVDRSASGVVLATADDFGCV 1272
            G E V  T  GELY+++G E++ +V AH G    ++              AA G + +GG DG V +W++  + +   DL                             A+ A     ++ S  +S +G K+L+GT  S++ E+ ++                + T L+GG+PL  GH+  ELWGLA HP+ RE+ T GDD TLRVW +  ++  +   L   +R CAY P    F A+G+GG  G             R    G+ G         GA+VLL A         E    K+WISDV+FSP GR +A  SHD+ +YLYA++   +   L  +KR  F KHNSY+TH DFS DS++++S CGAYE LF + +T  QV SA +L++  W++ TC LGW VQGIWP CADGTD+NAV  S+S  +LAT DD   V
Sbjct: 1899 GDEFVTGTASGELYVWRGGEVSRIVKAHEGETTVMYAHSSENLGIADSKMAATGVLLSGGKDGKVMMWNANFQSLKCFDLV----------------------------AMDARCLQKAICSAFLSTSGQKLLIGTRSSDIIEMDVS----------------SGTLLNGGKPLFSGHYNSELWGLAVHPSRREFVTTGDDGTLRVWDMETKQLTQLTRLSSKSRACAYSPDATVF-AIGLGGDNG------------VRHKATGKQGGQAKSKE--GAIVLLNAQTADAKVLFEDSPAKEWISDVKFSPCGRLVAFGSHDNAIYLYALSNGVNSGVLDAKKRKPFAKHNSYITHFDFSEDSKYIQSNCGAYEYLFCDTSTSEQVRSASSLKNVAWATWTCTLGWPVQGIWPECADGTDINAVCASSSRTILATGDDSSLV 2280          
BLAST of mRNA_P-wetherbeei_contig7.6.1 vs. uniprot
Match: A0A6A3F6H6_9STRA (Echinoderm microtubule-associated protein-like 6 n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F6H6_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.450e-76
Identity = 162/428 (37.85%), Postives = 228/428 (53.27%), Query Frame = 1
Query:   13 GKEAVVATGGGELYLFKGAEIAAVVAAHRGSINALH--TAADGR------IATGGADGVVNVWSSGLEKIATADLAVLLQNGAGSCGRNAAAAYKAEAIATAGAAVPAAADSNSVRSVCISPNGGKVLVGTLGSELFELSLNGSGNGRGGDGSNGRERAMTALHGGEPLVRGHWRDELWGLAAHPTAREYSTCGDDRTLRVWSVAGRRQLRSADLGGMARCCAYHPAGGAFLAVGMGGSVGRGRQKCDGVVKFFRDDRPGRSGXXXXXXXXXGALVLLPAAELHDTKQWISDVRFSPDGRTLAVASHDHGVYLYAVTVATDGASLTCRKRARFGKHNSYVTHLDFSADSQHLRSTCGAYELLFSEAATGAQVTSARALRDAVWSSTTCPLGWEVQGIWPPCADGTDVNAVDRSASGVVLATADDFGCV 1272
            G + V  T GGELY+++G +++  V AH G +  +   T AD        + +GG DG V +W+S  + +   DL  +     GS GR                          + SV ++  G  +LVGT  S++ E+ ++                + + L+GG+PL  GH+  ELWGLA HP+ RE+ T GDDRTLRVW +  +R +++  L   AR CAY P     +AVG GG  G  +++     +     R G              ++     E    K+WISDV+FSP G TLA+ SHD+ +YLY+V+  T       +KR  F KHNSY+TH DFS DS +L+S CGAYE LF + A+ + V+ A +LRD  W++ TC LGW VQGIWP CADGTD+NAV  S+S  +LA+ DD G V
Sbjct:  278 GGDFVTGTAGGELYVWRGNDLSRAVKAHDGEVRVVTSTTLADSPAGKAPVLLSGGKDGRVIMWNSAYQSLKCFDLDAMH---VGSFGRI-------------------------INSVFLNSTGRNLLVGTCSSDIIEIDVS----------------SGSVLNGGQPLFSGHFAMELWGLAVHPSQREFVTVGDDRTLRVWDMDAKRLIQARALPAKARACAYSPDS-ELVAVGFGGDNGVRQRRKPAPKQGQTQSREGGFAVLRVRDLNTDNILF----EDKPAKEWISDVKFSPCGNTLALCSHDNSIYLYSVSSGTS----EFKKRKPFSKHNSYITHFDFSEDSSYLQSNCGAYEYLFCDTASSSHVSRASSLRDVKWATWTCTLGWPVQGIWPECADGTDINAVCASSSRTILASGDDSGNV 652          
BLAST of mRNA_P-wetherbeei_contig7.6.1 vs. uniprot
Match: A0A024UD07_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UD07_9STRA)

HSP 1 Score: 268 bits (686), Expect = 3.190e-76
Identity = 178/425 (41.88%), Postives = 233/425 (54.82%), Query Frame = 1
Query:   25 VVATGGGELYLFKGAEIAAVVA-AHRGSINALHTAADGRIATGGADGVVNVW---SSGLEKIATADLAVLLQNGAGSCGRNAAAAYKAEAIATAGAAVPAAADSNSVRSVCISPNGGKVLVGTLGSELFELSLNGSGNGRGGDGSNGRERAMTALHGGEPLVRGHWRDELWGLAAHPTAREYSTCGDDRTLRVWSVAGRRQLRSADLGGMARCCAYHPAGGAFLAVGMGGSV-GRGRQ----KCDGVVKFFRDDRPGRSGXXXXXXXXXGALVLLPAAELHDTKQWISDVRFSPDGRTLAVASHDHGVYLYAVTVATDGASLTCRKRARFGKHNSYVTHLDFSADSQHLRSTCGAYELLFSEAATGAQVTSARALRDAVWSSTTCPLGWEVQGIWPPCADGTDVNAVDRSASGVVLATADDFGCV 1272
            VV T  G LYLF+  E+ + +  AH  S+  ++   D  + TGG DG + +W    S L  + T D   LL                     TAG  +         +S+C+SP+G  +L+GT  SE++ELS+              +E++M+       L+ GH  DELWGLA HPT +E  T GDD+ LRVW +   R LRS  L  MAR  AY P G   +AVG+GG V G+ +     KC GVV     D                   L  A E +DTK+WI+DV+FSP+G TLA+ASHD  V LY +T         C K+  F KH+S+V+HLDFSAD  +L+S  GAYELL+ +  TG QVTSA A +D  W++ TC LGW VQGIW P +DG+D+NAVDRS SG +LATADDFG V
Sbjct:  496 VVGTSDGALYLFQRPELRSTIENAHTASVQTMYVL-DKTLVTGGKDGQIKLWVAEKSSLTCLTTFDCNSLL--------------------GTAGVVL---------QSLCLSPDGSTILLGTQTSEIYELSV--------------KEKSMSMA-----LMCGHSVDELWGLATHPTKQEAVTVGDDKWLRVWDLTTTRVLRSVKLECMARAVAYSPDG-KLIAVGLGGQVPGKDKANKHPKCGGVVVLVASD-------------------LSKAFERNDTKKWIADVKFSPNGSTLAIASHDSSVVLYDMTKQ-------CAKKHAFKKHSSFVSHLDFSADGSYLQSISGAYELLYCDVKTGKQVTSASAFKDEQWATWTCILGWPVQGIWQPESDGSDINAVDRSHSGSLLATADDFGKV 844          
BLAST of mRNA_P-wetherbeei_contig7.6.1 vs. uniprot
Match: A0A397C367_9STRA (HELP domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C367_9STRA)

HSP 1 Score: 253 bits (645), Expect = 3.700e-75
Identity = 146/316 (46.20%), Postives = 184/316 (58.23%), Query Frame = 1
Query:  331 VRSVCISPNGGKVLVGTLGSELFELSLNGSGNGRGGDGSNGRERAMTALHGGEPLVRGHWRDELWGLAAHPTAREYSTCGDDRTLRVWSVAGRRQLRSADLGGMARCCAYHPAGGAFLAVGMGGSVGRGRQ--KCDGVVKFFRDDRPGRSGXXXXXXXXXGALVLLPAAELHDTKQWISDVRFSPDGRTLAVASHDHGVYLYAVTVATDGASLTCRKRARFGKHNSYVTHLDFSADSQHLRSTCGAYELLFSEAATGAQVTSARALRDAVWSSTTCPLGWEVQGIWPPCADGTDVNAVDRSASGVVLATADDFGCV 1272
            VRSVC +    ++L+GT GS++ +    G+             +A         + +GH +DELWGLA HP   EY T GDD+TLRVWS   R QLR   L  +AR CAY  A    +AVG GG +G+ ++  K  GVV F  D                    L    E   +K+WIS+++FSP+  TLAV SHD+ +YLYA+    D       K   F  HNSY+THLDFS D ++L+S CGAYELLFS+A TG QVTSAR+LRD  W + TC LGW VQGIWP CADGTD+NAV R  SG ++AT DDFG V
Sbjct:  131 VRSVCFNSEHTRILLGTSGSDVVQFDRMGT-------------KATV-------VTQGHCQDELWGLAVHPAKPEYCTVGDDKTLRVWSTEHRLQLRVKSLECVARACAYSNAAPFCIAVGFGGRIGKRKKHVKEGGVVVFSADS-------------------LEIVFEDKPSKEWISEIKFSPNNATLAVGSHDNAIYLYAIR---DNRFTKVTKV--FRGHNSYITHLDFSTDGKYLQSNCGAYELLFSDANTGKQVTSARSLRDVQWHTWTCALGWPVQGIWPACADGTDINAVHRCHSGELVATGDDFGQV 402          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMU8_9STRA5.490e-9847.43WD40-repeat-containing domain protein (Fragment) n... [more]
A0A7S1C976_9STRA2.700e-8643.33Hypothetical protein n=2 Tax=Bicosoecida sp. CB-20... [more]
A0A418APL5_9STRA6.280e-8047.63Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A2D4CF65_PYTIN1.180e-7841.76Microtubule-associated protein, putative n=1 Tax=P... [more]
A0A2D4C2Z3_PYTIN1.180e-7741.92Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A0W8DHH5_PHYNI5.070e-7737.38HELP domain-containing protein n=1 Tax=Phytophthor... [more]
K3WHU2_GLOUD1.270e-7636.96EF-hand domain-containing protein n=1 Tax=Globispo... [more]
A0A6A3F6H6_9STRA1.450e-7637.85Echinoderm microtubule-associated protein-like 6 n... [more]
A0A024UD07_9STRA3.190e-7641.88Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A397C367_9STRA3.700e-7546.20HELP domain-containing protein n=1 Tax=Aphanomyces... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7contigP-wetherbeei_contig7:12815..14242 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog65071.PYU1_T004534
PFAMsHELP,WD40
Model size1275
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.09e-77
EggNOG OGsCOG2319@1|root,KOG2106@2759|Eukaryota,1MD8U@121069|Pythiales
DescriptionMicrotubule-associated protein. Source PGD
Cds size1272
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186950.8234327-CDS-P-wetherbeei_contig7:12814..129511683186950.8234327-CDS-P-wetherbeei_contig7:12814..12951Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7 12815..12951 +
1683186950.83472-CDS-P-wetherbeei_contig7:13106..142411683186950.83472-CDS-P-wetherbeei_contig7:13106..14241Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7 13107..14241 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7.6.1prot_P-wetherbeei_contig7.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7 12815..14241 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7.6.1

>prot_P-wetherbeei_contig7.6.1 ID=prot_P-wetherbeei_contig7.6.1|Name=mRNA_P-wetherbeei_contig7.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=424bp
VGWAGKEAVVATGGGELYLFKGAEIAAVVAAHRGSINALHTAADGRIATG
GADGVVNVWSSGLEKIATADLAVLLQNGAGSCGRNAAAAYKAEAIATAGA
AVPAAADSNSVRSVCISPNGGKVLVGTLGSELFELSLNGSGNGRGGDGSN
GRERAMTALHGGEPLVRGHWRDELWGLAAHPTAREYSTCGDDRTLRVWSV
AGRRQLRSADLGGMARCCAYHPAGGAFLAVGMGGSVGRGRQKCDGVVKFF
RDDRPGRSGGGGGGGGSNGALVLLPAAELHDTKQWISDVRFSPDGRTLAV
ASHDHGVYLYAVTVATDGASLTCRKRARFGKHNSYVTHLDFSADSQHLRS
TCGAYELLFSEAATGAQVTSARALRDAVWSSTTCPLGWEVQGIWPPCADG
TDVNAVDRSASGVVLATADDFGCV
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mRNA from alignment at P-wetherbeei_contig7:12815..14242+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7.6.1 ID=mRNA_P-wetherbeei_contig7.6.1|Name=mRNA_P-wetherbeei_contig7.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1428bp|location=Sequence derived from alignment at P-wetherbeei_contig7:12815..14242+ (Phaeothamnion wetherbeei SAG_119_79)
GTCGGCTGGGCGGGCAAGGAGGCCGTCGTGGCGACGGGGGGCGGGGAGCT CTACCTCTTCAAGGGGGCCGAGATCGCTGCGGTCGTGGCGGCGCACCGGG GCTCCATCAATGCCCTGCACACGGCCGCCGACGGCAGGTCATAAATATGG CGTCTGAACTGACCGCATTTCATTTCTACCTTGCCTTTTCGCGACGGCGC TTTTGCTTTTGTTTGTTCCCTTCTCGTATTTTTCGGTGTTTACAGCCTCC TCTTGCACGTCCTCTCCTTTCGCTCTTTTCTGTTCTTCACAGGATCGCCA CGGGAGGCGCGGATGGCGTGGTCAACGTCTGGAGCAGCGGGCTCGAAAAG ATTGCCACCGCGGACCTCGCCGTGCTTCTGCAGAACGGCGCTGGCAGCTG CGGCAGGAATGCCGCCGCAGCATACAAGGCTGAGGCGATAGCGACGGCCG GAGCGGCTGTGCCGGCGGCGGCGGACAGCAATTCCGTCCGCAGTGTCTGC ATCTCGCCCAATGGTGGCAAAGTACTAGTCGGCACCCTCGGCAGCGAGCT GTTTGAACTCTCTCTGAACGGCAGTGGCAACGGCCGTGGTGGTGACGGCA GCAACGGCCGGGAGCGGGCCATGACGGCGCTGCACGGCGGCGAGCCGCTG GTCCGCGGTCACTGGCGGGATGAGCTCTGGGGGCTGGCGGCGCACCCGAC CGCCCGCGAGTATTCCACCTGCGGCGACGACCGCACCCTCCGCGTCTGGA GCGTTGCCGGCCGCCGCCAGCTTCGGTCGGCTGACCTCGGTGGCATGGCC CGCTGTTGCGCCTACCACCCGGCCGGCGGCGCCTTCCTTGCCGTCGGCAT GGGCGGCAGCGTCGGCCGCGGCAGGCAGAAGTGCGACGGCGTCGTCAAGT TCTTCCGCGACGACCGCCCCGGCAGATCCGGTGGTGGTGGCGGCGGCGGC GGCAGTAATGGGGCGCTGGTGCTGCTGCCGGCGGCCGAGCTGCACGACAC CAAGCAGTGGATCAGCGACGTCCGCTTCTCGCCCGACGGCCGCACCCTCG CCGTCGCATCGCACGACCACGGAGTTTATCTATACGCCGTAACGGTCGCG ACGGACGGCGCGTCGCTGACATGCCGGAAGCGGGCCCGCTTCGGCAAGCA CAATTCGTACGTAACTCACCTTGACTTTTCGGCGGATTCGCAGCACCTCC GGAGCACGTGCGGAGCCTACGAACTTCTCTTTAGCGAGGCGGCGACGGGC GCACAGGTGACGTCGGCGCGGGCGCTGCGGGACGCCGTCTGGAGCTCCAC AACATGTCCGCTCGGCTGGGAGGTGCAAGGAATATGGCCGCCGTGCGCCG ACGGGACGGACGTCAATGCGGTAGACCGGTCCGCCAGCGGAGTCGTGCTG GCCACGGCGGACGATTTCGGATGCGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7:12815..14242+

>mRNA_P-wetherbeei_contig7.6.1 ID=mRNA_P-wetherbeei_contig7.6.1|Name=mRNA_P-wetherbeei_contig7.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1272bp|location=Sequence derived from alignment at P-wetherbeei_contig7:12815..14242+ (Phaeothamnion wetherbeei SAG_119_79)
GTCGGCTGGGCGGGCAAGGAGGCCGTCGTGGCGACGGGGGGCGGGGAGCT
CTACCTCTTCAAGGGGGCCGAGATCGCTGCGGTCGTGGCGGCGCACCGGG
GCTCCATCAATGCCCTGCACACGGCCGCCGACGGCAGGATCGCCACGGGA
GGCGCGGATGGCGTGGTCAACGTCTGGAGCAGCGGGCTCGAAAAGATTGC
CACCGCGGACCTCGCCGTGCTTCTGCAGAACGGCGCTGGCAGCTGCGGCA
GGAATGCCGCCGCAGCATACAAGGCTGAGGCGATAGCGACGGCCGGAGCG
GCTGTGCCGGCGGCGGCGGACAGCAATTCCGTCCGCAGTGTCTGCATCTC
GCCCAATGGTGGCAAAGTACTAGTCGGCACCCTCGGCAGCGAGCTGTTTG
AACTCTCTCTGAACGGCAGTGGCAACGGCCGTGGTGGTGACGGCAGCAAC
GGCCGGGAGCGGGCCATGACGGCGCTGCACGGCGGCGAGCCGCTGGTCCG
CGGTCACTGGCGGGATGAGCTCTGGGGGCTGGCGGCGCACCCGACCGCCC
GCGAGTATTCCACCTGCGGCGACGACCGCACCCTCCGCGTCTGGAGCGTT
GCCGGCCGCCGCCAGCTTCGGTCGGCTGACCTCGGTGGCATGGCCCGCTG
TTGCGCCTACCACCCGGCCGGCGGCGCCTTCCTTGCCGTCGGCATGGGCG
GCAGCGTCGGCCGCGGCAGGCAGAAGTGCGACGGCGTCGTCAAGTTCTTC
CGCGACGACCGCCCCGGCAGATCCGGTGGTGGTGGCGGCGGCGGCGGCAG
TAATGGGGCGCTGGTGCTGCTGCCGGCGGCCGAGCTGCACGACACCAAGC
AGTGGATCAGCGACGTCCGCTTCTCGCCCGACGGCCGCACCCTCGCCGTC
GCATCGCACGACCACGGAGTTTATCTATACGCCGTAACGGTCGCGACGGA
CGGCGCGTCGCTGACATGCCGGAAGCGGGCCCGCTTCGGCAAGCACAATT
CGTACGTAACTCACCTTGACTTTTCGGCGGATTCGCAGCACCTCCGGAGC
ACGTGCGGAGCCTACGAACTTCTCTTTAGCGAGGCGGCGACGGGCGCACA
GGTGACGTCGGCGCGGGCGCTGCGGGACGCCGTCTGGAGCTCCACAACAT
GTCCGCTCGGCTGGGAGGTGCAAGGAATATGGCCGCCGTGCGCCGACGGG
ACGGACGTCAATGCGGTAGACCGGTCCGCCAGCGGAGTCGTGCTGGCCAC
GGCGGACGATTTCGGATGCGTG
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