mRNA_P-wetherbeei_contig7.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7.2.1 vs. uniprot
Match: W2QWB9_PHYPN (EF-hand domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QWB9_PHYPN) HSP 1 Score: 114 bits (286), Expect = 1.470e-25 Identity = 83/232 (35.78%), Postives = 126/232 (54.31%), Query Frame = 2
Query: 2 GIAQLAFSLDAAALISVGADDEHSIAVYEVS----SGRLAVSARGSRSAPLDLRANPYRPSAFVVCGEKHLDFWDRGGGNGPLQCEKGLF--KAAVGATVLCIGFFSAD-SVLCGAADGALLLFCGRECGTIVKAAHAGPVNAMHTTVAGNGGSDSGGGYVLTGGKDGKVIRWSTGGASGKAPVPVQ-ILSMTQLPPMSGAAVSFAPAVRALCLSADGSRLLVGTQGSEIFE 673
GI QLAF L L+S+G DD+HSIA+YE S S L +S +G+++AP + NP PS FV CG+K+++FW GG L +KGL K ++ + +AD +V+ G +DG L LF GR+ ++KA H G + + + G +L+GG+DG++I+W +P+ ++ L + LP G +R+ C S D +LVGT SEI+E
Sbjct: 450 GILQLAF-LSPDMLVSIGGDDDHSIAIYESSNNWKSAVLRISVKGNKAAPFHITTNPRVPSEFVTCGQKYIEFWSLGGKE--LVSKKGLLGKKGSLQPFPVAQYLETADQAVVVGTSDGCLYLFVGRQLTNVIKA-HEGAITVLFYSS----------GVLLSGGRDGQIIQWDDKLKQVGSPIQIRDSLESSLLPQRKG--------IRSCCYSPDRRTILVGTLASEIYE 659
BLAST of mRNA_P-wetherbeei_contig7.2.1 vs. uniprot
Match: A0A662X5C2_9STRA (EF-hand domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X5C2_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.990e-23 Identity = 82/233 (35.19%), Postives = 119/233 (51.07%), Query Frame = 2
Query: 2 GIAQLAFSLDAAALISVGADDEHSIAVYEVSSG----RLAVSARGSRSAPLDLRANPYRPSAFVVCGEKHLDFWDRGGGNGPLQCEKGLF--KAAVGATVLC--IGFFSADSVLCGAADGALLLFCGRECGTIVKAAHAGPVNAMHTTVAGNGGSDSGGGYVLTGGKDGKVIRWSTGGAS-GKAPVPVQILSMTQLPPMSGAAVSFAPAVRALCLSADGSRLLVGTQGSEIFE 673
G+ LAF LIS+G DD+HSIA+YE S+G L +S +G+++ P L NP PS FV CGEK+++FW G L +KG+ K + + +G SA +V+ G DG L F R+ T+VKA A +++ G +L+GG+DG++++W GKA IL T L ++R+ C S D +LVGTQ SEI+E
Sbjct: 450 GVLHLAFQTPET-LISIGGDDDHSIAIYESSNGWKSATLKISVKGNKAVPFHLTTNPLEPSEFVTCGEKYIEFWTLEGKT--LASKKGVLGKKGTLQLFPVAEYLGGSSAQAVVVGTNDGCLYTFIARQLTTVVKAHDAAVAALFYSS-----------GSLLSGGRDGQILQWDDKLKQIGKAFHIQDILESTTLQAQH-------KSIRSCCFSPDKRSILVGTQASEIYE 661
BLAST of mRNA_P-wetherbeei_contig7.2.1 vs. uniprot
Match: G4YNQ3_PHYSP (EF-hand domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YNQ3_PHYSP) HSP 1 Score: 105 bits (263), Expect = 1.700e-22 Identity = 81/231 (35.06%), Postives = 121/231 (52.38%), Query Frame = 2
Query: 2 GIAQLAFSLDAAALISVGADDEHSIAVYEVS----SGRLAVSARGSRSAPLDLRANPYRPSAFVVCGEKHLDFWDRGGGNGPLQCEKGLF--KAAVGATVLCIGFFSAD-SVLCGAADGALLLFCGRECGTIVKAAHAGPVNAMHTTVAGNGGSDSGGGYVLTGGKDGKVIRWSTGGASGKAPVPVQILSMTQLPPMSGAAVSFAPAVRALCLSADGSRLLVGTQGSEIFE 673
GI QLAF L + L+S+G DD+HSIAVYE S S L +S +G+++A + NP FV CG+K+++FW G L +KGL K ++ + + +AD +V+ G +DG L LF GR+ +VKA H G + A+ + G +L+GG+DG++ +W P+ +Q + P AVR+ C S D +LVGT SEI+E
Sbjct: 414 GILQLAF-LTSEMLVSIGGDDDHSIAVYESSNSWKSAVLKISVKGNKAASFHITTNPRMSREFVTCGQKYVEFWSLEGKE--LVSKKGLLGKKGSLQSFPVAQYLETADQAVVVGTSDGCLYLFVGRQLTNVVKA-HEGAITALSYSS----------GILLSGGRDGQIAQWDDKLKQIGPPIQIQNVIEASSQPQR-------KAVRSCCFSPDRRTILVGTLASEIYE 623
BLAST of mRNA_P-wetherbeei_contig7.2.1 vs. uniprot
Match: A0A0N7L5A4_PLAHL (Echinoderm microtubule-associated 6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5A4_PLAHL) HSP 1 Score: 99.0 bits (245), Expect = 4.180e-20 Identity = 81/232 (34.91%), Postives = 120/232 (51.72%), Query Frame = 2
Query: 2 GIAQLAFSLDAAALISVGADDEHSIAVYEVS---SGRLAVSARGSRSAPLDLRANPYRPSAFVVCGEKHLDFWDRGG----GNGPLQCEKGLFKAAVGATVLCIGFFSADSVLCGAADGALLLFCGRECGTIVKAAHAGPVNAMHTTVAGNGGSDSGGGYVLTGGKDGKVIRWSTGGASGKAPVPVQILSMTQLPP-MSGAAVSFAPAVRALCLSADGSRLLVGTQGSEIFE 673
G+ QLAF L A LISVG DD+HS+A+Y S S L V+ +G+++AP + NP S FV+CG+K +DFW G L +KG + A L G +V+ G +DG+L LF R+ +VKA G + A+ + G++L+GG+DG++I+W QI S+T + + G + +R+ C S D +LVGT SEI+E
Sbjct: 293 GVLQLAF-LSAELLISVGGDDDHSVAIYASSTWKSATLKVAVKGNKAAPFHVTTNPRVCSEFVICGQKFVDFWSLGSKELVSKRALLGKKGSLQPFPVAEYL--GKMD-QAVVVGTSDGSLYLFVERQLTKVVKA-QDGAITALFYSS----------GHLLSGGRDGRIIQWDD--------KLNQIGSVTNIQDSLEGLFLPQRKGIRSCCFSPDKRTILVGTLASEIYE 501
BLAST of mRNA_P-wetherbeei_contig7.2.1 vs. uniprot
Match: A0A8K1FCK6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCK6_PYTOL) HSP 1 Score: 95.5 bits (236), Expect = 6.670e-19 Identity = 80/231 (34.63%), Postives = 112/231 (48.48%), Query Frame = 2
Query: 2 GIAQLAFSLDAAALISVGADDEHSIAVYEVSSGR----LAVSARGSRSAPLDLRANPYRPSA-FVVCGEKHLDFWDRGGGNGPLQCEKGLFKAAVGATVLCIGFF--SADSVLCGAADGALLLFCGRECGTIVKAAHAGPVNAMHTTVAGNGGSDSGGGYVLTGGKDGKVIRWSTGGASGKAPVPVQILSMTQLPPMSGAAVSFAPAVRALCLSADGSRLLVGTQGSEIFE 673
G+ LAF D+ LIS+G DD+HSIAVYE G L VS++G+++ P L ANP + FV CGEK++DFW G L +K L + + S+ SV+ G DG L F GR+ ++++A H VNA+H G +++G KDG+V WS P V+ + P VR+ C S D +L GT SEI+E
Sbjct: 421 GVLLLAFQQDSQ-LISIGGDDDHSIAVYESKDGWKSAVLKVSSKGNKAVPYHLTANPSSTTLDFVCCGEKYIDFWTSDGKM--LSAKKALLGKKGNQQPFLVAEYLGSSGSVVVGTNDGHLYHFGGRDLSSVIRA-HGSAVNALHFQA----------GSLVSGSKDGQVSVWSDKLKLLVGPFDVKDTVLGSRPMYYN--------VRSCCFSHDQKTILFGTLASEIYE 629
BLAST of mRNA_P-wetherbeei_contig7.2.1 vs. uniprot
Match: C1N8S3_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N8S3_MICPC) HSP 1 Score: 94.4 bits (233), Expect = 1.550e-18 Identity = 80/233 (34.33%), Postives = 118/233 (50.64%), Query Frame = 2
Query: 5 IAQLAFSLDAAALISVGADDEHSIAVYEVSSGRLAVSARGSRSAPLDLRANPYRPSAFVVCGEKHLDFWDRGGGNGPLQCEKGLF-KAAVGATVLCIGFFSADSVLCGAADGALLLFC--GRECGTIVKAAHAGPVNAMHTTVAGNGGSDSGGGYVLTGGKDGKV---IRWSTGGASGKAPVPVQILSMTQLPPMSGAAVSFAPAVRALCLSADGSRLLVGTQGSEIFEFSLA 685
+ L+F L SVG DD+HSIAVY+ +S R+ ++RG + NPY V G KHL FW GG L + G++ + +T L I F S S L G G + + G +C A H GP++ M T +D Y++TGGKDGKV ++ + V+ ++ Q P+ AP V+++C+ +G++LLVGT+GSEIFEF L+
Sbjct: 111 VTSLSFDATGRFLASVGMDDDHSIAVYDWASRRMLANSRGDERRVFNCEYNPY-DGRLVTGGVKHLKFWVMEGGY--LVGKNGVYGRVGQVSTTLSIAFHSDGSTLTGTQGGIIYQWADGGEQCIQRYDAVHQGPIHDMFVT------ND----YIITGGKDGKVHFFTQYVEKVFTIDMAKVVETITDLQGKPLC-CYDGRAPCVKSICM--EGTQLLVGTRGSEIFEFDLS 327
BLAST of mRNA_P-wetherbeei_contig7.2.1 vs. uniprot
Match: A0A397D4C0_9STRA (HELP domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D4C0_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 3.690e-18 Identity = 79/234 (33.76%), Postives = 116/234 (49.57%), Query Frame = 2
Query: 2 GIAQLAFSLDAAALISVGADDEHSIAVYEVS----SGRLAVSARGSRSAPLDLRANPYRPSAFVVCGEKHLDFWDRGGGNGPLQCEKGLF-KAAVGATVLCIGFFSADS---VLCGAADGALLLFCGRECGTIVKAAHAGPVNAMHTTVAGNGGSDSGGGYVLTGGKDGKVIRW--STGGASGKAPVPVQILSMTQLPPMSGAAVSFAPAVRALCLSADGSRLLVGTQGSEIFE 673
GI QLAFS L+SVGADD HSI VY + L A+G+++ PL + +P F + G K+++FW G +C KG+F K +LC + + + ++ G +DGAL LF + +IV+ AHA V M+ D ++TGGKDG V W G + + +L T V+++CLS+DGS +L+GTQ SEI+E
Sbjct: 357 GIIQLAFSTIGNELVSVGADDNHSIGVYTTRDMWHTAELTWFAKGNKAVPLHVVWHPTDAMHFCILGVKYIEFW------GKEKCNKGIFGKKGKLQPLLCGAWVTLGTDMTLVVGTSDGALYLFQRPDLRSIVENAHAAAVQTMYA-------QDK---TLITGGKDGLVKLWVAEKAGLTCLSTFDCNVLLHTT-----------GVVVQSVCLSSDGSVVLLGTQSSEIYE 563
BLAST of mRNA_P-wetherbeei_contig7.2.1 vs. uniprot
Match: A0A397FJP1_9STRA (HELP domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FJP1_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 3.920e-18 Identity = 79/234 (33.76%), Postives = 116/234 (49.57%), Query Frame = 2
Query: 2 GIAQLAFSLDAAALISVGADDEHSIAVYEVS----SGRLAVSARGSRSAPLDLRANPYRPSAFVVCGEKHLDFWDRGGGNGPLQCEKGLF-KAAVGATVLCIGFFSADS---VLCGAADGALLLFCGRECGTIVKAAHAGPVNAMHTTVAGNGGSDSGGGYVLTGGKDGKVIRW--STGGASGKAPVPVQILSMTQLPPMSGAAVSFAPAVRALCLSADGSRLLVGTQGSEIFE 673
GI QLAFS L+SVGADD HSI VY + L A+G+++ PL + +P F + G K+++FW G +C KG+F K +LC + + + ++ G +DGAL LF + +IV+ AHA V M+ D ++TGGKDG V W G + + +L T V+++CLS+DGS +L+GTQ SEI+E
Sbjct: 150 GIIQLAFSTIGNELVSVGADDNHSIGVYTTRDMWHTAELTWFAKGNKAVPLHVVWHPTDAMHFCILGVKYIEFW------GKEKCNKGIFGKKGKLQPLLCGAWVTLGTDMTLVVGTSDGALYLFQRPDLRSIVENAHAAAVQTMYA-------QDK---TLITGGKDGLVKLWVAEKAGLTCLSTFDCNVLLHTT-----------GVVVQSVCLSSDGSVVLLGTQSSEIYE 356
BLAST of mRNA_P-wetherbeei_contig7.2.1 vs. uniprot
Match: A0A7S1XVQ5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVQ5_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 5.010e-18 Identity = 79/243 (32.51%), Postives = 115/243 (47.33%), Query Frame = 2
Query: 2 GIAQLAFSLDAAALISVGADDEHSIAVYEVSSG----------RLAVSARGSRSAPLDLRANPYRPSAFVVCGEKHLDFWDRGGGNGPLQCEKGLFKAAVGAT-VLCIGFFSADSVLCGAADGALLLFCGRECGTIVKAAHAGPVNAMHTT--VAGNGGSDSGGGYVLTGGKDGKVIRWSTGGASGKAPVPVQILSMTQLPPMSGAAVSFAPAVRALCLSADGS---RLLVGTQGSEIFEFSL 682
G++ LAF+ L+SVG DD HS+AVY+VS RL +++G++ L L +PY +AF CG KH+D W+ + K L K AT +LC + D ++ G GA+ C E + AH N + + GG D G +L+GGKD K+I + G K V + +P V A VR + +G R+LVGTQG++IFEF +
Sbjct: 167 GVSALAFNHSGLRLVSVGCDDSHSVAVYDVSLAADGEGGNGRPRLLYNSKGNKQKVLGLCVSPYDDAAFATCGMKHIDLWEVSSKGLSSKKMKFLVKGKNHATTILCADYLGPDRLIAGVMSGAIYE-CRGENFYAIHQAHEKTCNCLRVERDIYKTGGGDDAEGRILSGGKDNKIIMFDLGFQ--KLYVIDLLAEAFGIPAWRDPCVRSAD-VRFTADAGEGGAKERVLVGTQGADIFEFGV 405
BLAST of mRNA_P-wetherbeei_contig7.2.1 vs. uniprot
Match: A0A397AHQ0_9STRA (HELP domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AHQ0_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 7.540e-18 Identity = 78/234 (33.33%), Postives = 117/234 (50.00%), Query Frame = 2
Query: 2 GIAQLAFSLDAAALISVGADDEHSIAVYEVS----SGRLAVSARGSRSAPLDLRANPYRPSAFVVCGEKHLDFWDRGGGNGPLQCEKGLF-KAAVGATVLCIGFFSADS---VLCGAADGALLLFCGRECGTIVKAAHAGPVNAMHTTVAGNGGSDSGGGYVLTGGKDGKVIRW--STGGASGKAPVPVQILSMTQLPPMSGAAVSFAPAVRALCLSADGSRLLVGTQGSEIFE 673
GI QLAFS L+SVGADD HSI VY + L A+G+++ PL + +P F + G K+++FW++ +C KG+F K +LC + + + ++ G +DGAL LF + +IV+ AHA V M+ D ++TGGKDG V W G + + +L T V+++CLS+DGS +L+GTQ SEI+E
Sbjct: 457 GIIQLAFSTIGNELVSVGADDNHSIGVYTTRDMWHTAELTWFAKGNKAVPLHVVWHPTDAMHFCILGVKYIEFWEKE------KCNKGIFGKKGKLQPLLCGAWVTLGTDMTLVVGTSDGALYLFQRPDLRSIVENAHAAAVQTMYA-------QDK---TLITGGKDGLVKLWVAEKTGLTCLSTFDCNVLLHTT-----------GVVVQSVCLSSDGSVVLLGTQSSEIYE 663 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7.2.1 >prot_P-wetherbeei_contig7.2.1 ID=prot_P-wetherbeei_contig7.2.1|Name=mRNA_P-wetherbeei_contig7.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=230bp GNRPAGLLPRRRCTDLRRRRRRALHRRLRSVERASGGVRTRFSFGSAGPPback to top mRNA from alignment at P-wetherbeei_contig7:8601..9290+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7.2.1 ID=mRNA_P-wetherbeei_contig7.2.1|Name=mRNA_P-wetherbeei_contig7.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig7:8601..9290+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7:8601..9290+ >mRNA_P-wetherbeei_contig7.2.1 ID=mRNA_P-wetherbeei_contig7.2.1|Name=mRNA_P-wetherbeei_contig7.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig7:8601..9290+ (Phaeothamnion wetherbeei SAG_119_79)back to top |