mRNA_P-wetherbeei_contig6991.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6991.1.1 vs. uniprot
Match: D7FGR1_ECTSI (OTU domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR1_ECTSI) HSP 1 Score: 145 bits (365), Expect = 3.250e-39 Identity = 74/151 (49.01%), Postives = 107/151 (70.86%), Query Frame = 1
Query: 1 GKATKAKGSTAGKGPANHVAVPNKRQERQERLQLRKTRHRERATAHLTDSQDKEFTEQMRRLGCQIRFIVGDGNCLFRALADQITGRQSDHTEIRAKVVGYIEEQRELFEAFMEDDEPFGDYVERMRGGGEWGGHQELYAAAQHFGVHIIV 453
GK K +GS AG+ +K +ER ER +LRK R R + + + + D++F Q+ ++GC+I+FI GDGNCLFR+LADQ+ GR DH+ +RAKV+ +++ RE+FE +MEDDE FGDY+ERMRG EWGG+QEL AA+Q + +++V
Sbjct: 2 GKHGKQRGSAAGQ-------QADKAKERNERARLRKDRMRN--SLYSSSADDRDFEAQVEQIGCKIKFIQGDGNCLFRSLADQLEGRSEDHSSVRAKVMDHLQRNREVFEPYMEDDETFGDYLERMRGEAEWGGNQELVAASQLYKTNVVV 143
BLAST of mRNA_P-wetherbeei_contig6991.1.1 vs. uniprot
Match: A0A6V1PSA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PSA8_HETAK) HSP 1 Score: 121 bits (303), Expect = 1.040e-29 Identity = 53/103 (51.46%), Postives = 74/103 (71.84%), Query Frame = 1
Query: 145 DSQDKEFTEQMRRLGCQIRFIVGDGNCLFRALADQITGRQSDHTEIRAKVVGYIEEQRELFEAFMEDDEPFGDYVERMRGGGEWGGHQELYAAAQHFGVHIIV 453
D +D++F Q+ +GC+I+FI GDGNC+FR++ADQI G +H + R +++ +IE +LF FMEDDEPF Y+ RMR +WGGHQELYAA+Q F I+V
Sbjct: 50 DDEDRKFALQLASIGCRIKFISGDGNCMFRSIADQIEGNPENHRDFRNRIMDHIEAHGDLFALFMEDDEPFAGYLSRMRADRQWGGHQELYAASQLFRTTILV 152
BLAST of mRNA_P-wetherbeei_contig6991.1.1 vs. uniprot
Match: A0A7S2WLR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLR9_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.000e-28 Identity = 53/104 (50.96%), Postives = 74/104 (71.15%), Query Frame = 1
Query: 142 TDSQDKEFTEQMRRLGCQIRFIVGDGNCLFRALADQITGRQSDHTEIRAKVVGYIEEQRELFEAFMEDDEPFGDYVERMRGGGEWGGHQELYAAAQHFGVHIIV 453
T ++D F QM +G +I I GDGNC+FR+++DQ+ G Q++H E R +V +I +RE FE F+EDDE F DY++RM GEWGGHQELYAA Q + V+I++
Sbjct: 64 TAAEDLNFDGQMAAVGLRIVSITGDGNCMFRSISDQLCGVQANHWEYRKHIVDFINAEREQFEPFIEDDESFDDYIQRMGSDGEWGGHQELYAATQAYNVNIVI 167
BLAST of mRNA_P-wetherbeei_contig6991.1.1 vs. uniprot
Match: W2QF02_PHYPN (OTU domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=W2QF02_PHYPN) HSP 1 Score: 112 bits (280), Expect = 5.810e-28 Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 154 DKEFTEQMRR----LGCQIRFIVGDGNCLFRALADQITGRQSDHTEIRAKVVGYIEEQRELFEAFMEDDEPFGDYVERMRGGGEWGGHQELYAAAQHFGVHIIV 453
D E MRR +GC++ + DGNCLFRAL DQ+ G Q H E+R K+V Y+E+ R+ FE FMED+E F Y ERMR G WGG+QELYAAA+ F V+++V
Sbjct: 49 DDGAIELMRRQLVDVGCKLHEVEADGNCLFRALGDQLYGDQHQHEEVRKKIVSYLEQHRDDFEPFMEDEEKFEKYCERMREDGTWGGNQELYAAARLFQVYVVV 152
BLAST of mRNA_P-wetherbeei_contig6991.1.1 vs. uniprot
Match: A0A3M6VS47_9STRA (OTU domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VS47_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.740e-27 Identity = 52/99 (52.53%), Postives = 71/99 (71.72%), Query Frame = 1
Query: 157 KEFTEQMRRLGCQIRFIVGDGNCLFRALADQITGRQSDHTEIRAKVVGYIEEQRELFEAFMEDDEPFGDYVERMRGGGEWGGHQELYAAAQHFGVHIIV 453
K +Q+ +GC++ + GDGNCLFRAL+DQ+ G Q + ++R K+V Y+E+ R FE FMED+E F Y +RMR G WGG+QELYAAA+ F V+IIV
Sbjct: 50 KLMRKQLADIGCKLHEVKGDGNCLFRALSDQLFGDQQQYQQVREKIVNYLEQHRNDFEPFMEDEEKFEKYCDRMRDNGTWGGNQELYAAARLFQVYIIV 148
BLAST of mRNA_P-wetherbeei_contig6991.1.1 vs. uniprot
Match: A0A329SA03_9STRA (OTU domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SA03_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.810e-27 Identity = 54/103 (52.43%), Postives = 69/103 (66.99%), Query Frame = 1
Query: 145 DSQDKEFTEQMRRLGCQIRFIVGDGNCLFRALADQITGRQSDHTEIRAKVVGYIEEQRELFEAFMEDDEPFGDYVERMRGGGEWGGHQELYAAAQHFGVHIIV 453
D K Q+ +GC++ + DGNCLFRAL DQ+ G Q H E R K+V Y+E+ RE FE FMED+E F Y ERMR G WGG+QELYAAA+ F V+++V
Sbjct: 51 DDTIKLMRRQLADVGCKLHEVEADGNCLFRALGDQLYGDQHQHEEAREKIVSYLEQHREDFEPFMEDEEKFEKYCERMREDGTWGGNQELYAAARLFQVYVVV 153
BLAST of mRNA_P-wetherbeei_contig6991.1.1 vs. uniprot
Match: V9FCY7_PHYPR (OTU domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9FCY7_PHYPR) HSP 1 Score: 112 bits (280), Expect = 3.300e-27 Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 154 DKEFTEQMRR----LGCQIRFIVGDGNCLFRALADQITGRQSDHTEIRAKVVGYIEEQRELFEAFMEDDEPFGDYVERMRGGGEWGGHQELYAAAQHFGVHIIV 453
D E MRR +GC++ + DGNCLFRAL DQ+ G Q H E+R K+V Y+E+ R+ FE FMED+E F Y ERMR G WGG+QELYAAA+ F V+++V
Sbjct: 49 DDGAIELMRRQLADVGCKLHEVEADGNCLFRALGDQLYGDQHQHEEVRKKIVSYLEQHRDDFEPFMEDEEKFEKYCERMREDGTWGGNQELYAAARLFQVYVVV 152
BLAST of mRNA_P-wetherbeei_contig6991.1.1 vs. uniprot
Match: A0A6A4DN31_9STRA (OTU domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DN31_9STRA) HSP 1 Score: 112 bits (280), Expect = 4.380e-27 Identity = 53/103 (51.46%), Postives = 70/103 (67.96%), Query Frame = 1
Query: 145 DSQDKEFTEQMRRLGCQIRFIVGDGNCLFRALADQITGRQSDHTEIRAKVVGYIEEQRELFEAFMEDDEPFGDYVERMRGGGEWGGHQELYAAAQHFGVHIIV 453
D K Q+ +GC++ + DGNCLFRAL DQ+ G Q H E+R K+V Y+E+ R+ FE FMED+E F Y ERMR G WGG+QELYAAA+ F V+++V
Sbjct: 62 DDAIKLMRRQLADVGCKLHEVEADGNCLFRALGDQLYGDQHRHEEVRGKLVDYLEQHRDDFEPFMEDEEKFDRYCERMRDDGTWGGNQELYAAARLFQVYVVV 164
BLAST of mRNA_P-wetherbeei_contig6991.1.1 vs. uniprot
Match: D0NNX0_PHYIT (OTU domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NNX0_PHYIT) HSP 1 Score: 109 bits (272), Expect = 1.910e-26 Identity = 49/90 (54.44%), Postives = 66/90 (73.33%), Query Frame = 1
Query: 184 LGCQIRFIVGDGNCLFRALADQITGRQSDHTEIRAKVVGYIEEQRELFEAFMEDDEPFGDYVERMRGGGEWGGHQELYAAAQHFGVHIIV 453
+GC++ + DGNCLFRALADQ+ G Q H ++R K+V Y+E+ R+ FE FMED+E F Y RMR G WGG+QELYAAA+ F V+++V
Sbjct: 8 VGCKLHEVEADGNCLFRALADQLYGDQHQHEDVREKIVSYLEQHRDDFEPFMEDEEKFEKYCARMREDGTWGGNQELYAAARLFQVYVVV 97
BLAST of mRNA_P-wetherbeei_contig6991.1.1 vs. uniprot
Match: G5AIS5_PHYSP (OTU domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AIS5_PHYSP) HSP 1 Score: 109 bits (272), Expect = 2.130e-26 Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 1
Query: 172 QMRRLGCQIRFIVGDGNCLFRALADQITGRQSDHTEIRAKVVGYIEEQRELFEAFMEDDEPFGDYVERMRGGGEWGGHQELYAAAQHFGVHIIV 453
Q+ +GC++ + DGNCLFRALADQ+ G Q H ++R K+V Y+E+ R+ FE FMED+E F Y ERM G WGG+QELYAAA+ F V+++V
Sbjct: 4 QLADVGCKLHEVEADGNCLFRALADQLYGDQHRHKDVRGKIVDYLEQHRDDFEPFMEDEEKFDKYCERMCEDGTWGGNQELYAAARLFQVYVVV 97 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6991.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6991.1.1 >prot_P-wetherbeei_contig6991.1.1 ID=prot_P-wetherbeei_contig6991.1.1|Name=mRNA_P-wetherbeei_contig6991.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=158bp GKATKAKGSTAGKGPANHVAVPNKRQERQERLQLRKTRHRERATAHLTDSback to top mRNA from alignment at P-wetherbeei_contig6991:17..943- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6991.1.1 ID=mRNA_P-wetherbeei_contig6991.1.1|Name=mRNA_P-wetherbeei_contig6991.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=927bp|location=Sequence derived from alignment at P-wetherbeei_contig6991:17..943- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6991:17..943- >mRNA_P-wetherbeei_contig6991.1.1 ID=mRNA_P-wetherbeei_contig6991.1.1|Name=mRNA_P-wetherbeei_contig6991.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig6991:17..943- (Phaeothamnion wetherbeei SAG_119_79)back to top |