mRNA_P-wetherbeei_contig6974.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6974.1.1 vs. uniprot
Match: D7G6U0_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U0_ECTSI) HSP 1 Score: 108 bits (271), Expect = 1.080e-24 Identity = 66/160 (41.25%), Postives = 82/160 (51.25%), Query Frame = 1
Query: 4 RADCSED--TSAGLCGRCLSGYSGATMFANTPCVSTAANLTLCADRVRNGNETDVDCGGGSCSQVCATGQNCAAASDCEFGACVGG-------ICGVAVKICSEDCGG--RGNCTYID-TAGTALAATACTVDR--LLCFALCSCNDGYYGEACQYTAAE 441
R DC D CG C+SG++G N+ CV T A C+D +NG+ETDVDCGG SCS C +G C +DC + C IC K C DCGG RG C Y+ T+G L A C D C A C+C DGY G+ CQY+ +E
Sbjct: 826 RDDCGTDGLREDNTCGECVSGFTGVVGPHNSLCVDTTALDATCSDGEKNGDETDVDCGGSSCSP-CPSGSTCLVDTDCSYNNCPAPASTTSDPICVSPAKACPNDCGGTIRGTCEYVSSTSGAVLTAADCLADTPTSTCRASCNCFDGYGGDGCQYSDSE 984
BLAST of mRNA_P-wetherbeei_contig6974.1.1 vs. uniprot
Match: A0A6H5JDC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC0_9PHAE) HSP 1 Score: 108 bits (270), Expect = 1.470e-24 Identity = 67/160 (41.88%), Postives = 82/160 (51.25%), Query Frame = 1
Query: 4 RADCSED--TSAGLCGRCLSGYSGATMFANTPCVSTAANLTLCADRVRNGNETDVDCGGGSCSQVCATGQNCAAASDCEFGACV-------GGICGVAVKICSEDCGG--RGNCTYID-TAGTALAATACTVDR--LLCFALCSCNDGYYGEACQYTAAE 441
R DC D CG C+SG+ G N+ CV T A C+D +NG+ETDVDCGG SCS C +G C +DC + C IC K C DCGG RG C Y+ T+G AL A C D C A C+C DGY G+ CQY+ +E
Sbjct: 927 RDDCGTDGLREENTCGECVSGFVGVVGPHNSLCVDTTAFDASCSDGEKNGDETDVDCGGPSCSP-CPSGSTCLVGTDCSYNNCPEPASTTSDPICVPPAKACPNDCGGTVRGTCEYVSSTSGAALNAADCLADTPTSTCRATCNCFDGYGGDGCQYSDSE 1085
BLAST of mRNA_P-wetherbeei_contig6974.1.1 vs. uniprot
Match: A0A2M8B869_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_63_12 TaxID=1973967 RepID=A0A2M8B869_9DELT) HSP 1 Score: 60.1 bits (144), Expect = 1.420e-8 Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 103 TAANLTL-CADRVRNGNETDVDCGGGSCSQVCATGQNCAAASDCEFGACVGGICGVA 270
T ++T+ CAD V+NG+ETDVDCGG SC VCA G CAAA+DC G C G+C A
Sbjct: 75 TEGDVTISCADGVKNGDETDVDCGG-SCG-VCAEGSACAAATDCASGYCGDGVCAAA 129
BLAST of mRNA_P-wetherbeei_contig6974.1.1 vs. uniprot
Match: A0A7J7QGK1_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QGK1_9CHLO) HSP 1 Score: 61.2 bits (147), Expect = 4.000e-8 Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 85 NTPCVSTAANLTLCADRVRNGNETDVDCGGGSCSQVCATGQNCAAASDCEFGACVGGIC 261
N CV A C++ V++G ETD+DCGGG C +C+ GQ C A DC G C GG+C
Sbjct: 121 NGVCVEAAT----CSNGVKDGRETDLDCGGGGCQALCSRGQGCVEARDCITGVCSGGVC 175
BLAST of mRNA_P-wetherbeei_contig6974.1.1 vs. uniprot
Match: A9FKQ2_SORC5 (Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) TaxID=448385 RepID=A9FKQ2_SORC5) HSP 1 Score: 60.5 bits (145), Expect = 7.890e-8 Identity = 38/93 (40.86%), Postives = 44/93 (47.31%), Query Frame = 1
Query: 1 GRADCSEDTSAGLCGRCLSGYSGATMFANTPCVSTAANLTLCADRVRNGNETDVDCGGGS------CSQVCATGQNCAAASDCEFGACVGGIC 261
G A C++D L C+SGY TP C D +NGNETDVDCGG S C++ C GQ C A DC G C GG C
Sbjct: 281 GCAPCADDLECALDSDCVSGYCNTAGRCATP---------SCMDTDKNGNETDVDCGGASFQGAPACNR-CGVGQTCGVADDCTTGFCSGGTC 363
BLAST of mRNA_P-wetherbeei_contig6974.1.1 vs. uniprot
Match: A0A7Y6PQR5_9DELT (Uncharacterized protein n=1 Tax=Kofleriaceae bacterium TaxID=2212474 RepID=A0A7Y6PQR5_9DELT) HSP 1 Score: 60.1 bits (144), Expect = 9.710e-8 Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 103 TAANLTLCADRVRNGNETDVDCGGGSCSQVCATGQNCAAASDCEFGACVGGICG 264
T A C DRVR+G+ET VDCGG +C + CA GQ C+A +DCE G C G+CG
Sbjct: 270 TPAPRASCFDRVRDGSETGVDCGG-TC-RTCAAGQTCSAPTDCESGVCESGVCG 321
BLAST of mRNA_P-wetherbeei_contig6974.1.1 vs. uniprot
Match: A0A842QMK4_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A842QMK4_9ARCH) HSP 1 Score: 59.7 bits (143), Expect = 1.650e-7 Identity = 38/86 (44.19%), Postives = 42/86 (48.84%), Query Frame = 1
Query: 22 DTSAGLCGRCLSGYSGATMFANTPCVSTAAN------LTLCADRVRNGNETDVDCGGGSCSQVCATGQNCAAASDCEFGACVGGIC 261
D S G G C G S N+ C+S N C D V+NGNETDVDCGGG C G +C SDC GAC GIC
Sbjct: 1311 DLSCGEDGSCRIGES---CSKNSNCLSGYCNEDGVCDYASCDDDVKNGNETDVDCGGGECDPCPDIGDSCGDDSDCASGACRNGIC 1393
BLAST of mRNA_P-wetherbeei_contig6974.1.1 vs. uniprot
Match: A0A814V2I1_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A814V2I1_9BILA) HSP 1 Score: 59.3 bits (142), Expect = 1.910e-7 Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 115 LTLCADRVRNGNETDVDCGGGSCSQVCATGQNCAAASDCEFGACVGGIC 261
+T C+D ++N +ETD+DCGG SCS+ C+T Q C SDC +C+ GIC
Sbjct: 97 ITTCSDGIQNQDETDIDCGGLSCSRRCSTNQKCQVVSDCNKTSCMCGIC 145
BLAST of mRNA_P-wetherbeei_contig6974.1.1 vs. uniprot
Match: A0A815WBS6_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A815WBS6_ADIRI) HSP 1 Score: 59.3 bits (142), Expect = 2.110e-7 Identity = 37/110 (33.64%), Postives = 49/110 (44.55%), Query Frame = 1
Query: 88 TPCVSTAANLTLCADRVRNGNETDVDCGGGSC---SQVCATGQNCAAASDCEFGACVGGICGVAVKICSEDCGGRGNCTYIDTAGTALAATACTVDRLLCFALCSCNDGY 408
T C+ C D ++NG ETD DCGG +C ++C +GQNC +DC G C G+C C++ G T D G AC D C A C G+
Sbjct: 210 TLCLFDDVIAPTCTDGIKNGKETDQDCGGKTCILQGKICGSGQNCINGTDCTSGVCTRGVC--QAPKCNDGVQNGGE-TGRDCGGPCAPTKACD-DGSACVAATDCKTGW 315
BLAST of mRNA_P-wetherbeei_contig6974.1.1 vs. uniprot
Match: A0A150Q4M3_SORCE (Uncharacterized protein n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150Q4M3_SORCE) HSP 1 Score: 58.9 bits (141), Expect = 2.190e-7 Identity = 29/60 (48.33%), Postives = 36/60 (60.00%), Query Frame = 1
Query: 115 LTLCADRVRNGNETDVDCGGGSCSQVCATGQNCAAASDCEFGACVGGICGVAVKICSEDC 294
+ LCAD ++NG ETDVDCGG +C Q CAT + C A DC G C +C C E+C
Sbjct: 42 VNLCADGMKNGEETDVDCGGPTCPQ-CATAKACTEADDCSSGFCADDVC--CDTACDEEC 98 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6974.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6974.1.1 >prot_P-wetherbeei_contig6974.1.1 ID=prot_P-wetherbeei_contig6974.1.1|Name=mRNA_P-wetherbeei_contig6974.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp GRADCSEDTSAGLCGRCLSGYSGATMFANTPCVSTAANLTLCADRVRNGNback to top mRNA from alignment at P-wetherbeei_contig6974:1510..2677- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6974.1.1 ID=mRNA_P-wetherbeei_contig6974.1.1|Name=mRNA_P-wetherbeei_contig6974.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1168bp|location=Sequence derived from alignment at P-wetherbeei_contig6974:1510..2677- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6974:1510..2677- >mRNA_P-wetherbeei_contig6974.1.1 ID=mRNA_P-wetherbeei_contig6974.1.1|Name=mRNA_P-wetherbeei_contig6974.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig6974:1510..2677- (Phaeothamnion wetherbeei SAG_119_79)back to top |