mRNA_P-wetherbeei_contig6942.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6942.1.1 vs. uniprot
Match: A0A7S3UXB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXB9_HETAK) HSP 1 Score: 108 bits (270), Expect = 1.160e-22 Identity = 47/98 (47.96%), Postives = 71/98 (72.45%), Query Frame = 3
Query: 378 SGPKSTTRFLASLVRMVRHEDPQIISWDHGRLVINDPKRLVNEILEKYFRHSNYTSLQRQLNSFGFHKTEGKGRYERSIYTRQGLAGRPIEAILTVTR 671
S +S FL+ LV++++ E+P+IISWD GR+ + DP RL+++IL+KYFRH+NY S +RQLN FGF K +GKG++E +Y + L G+ +E I + R
Sbjct: 21 SARRSCPDFLSKLVQILKKENPEIISWDAGRIYLRDPARLMSQILKKYFRHANYNSFKRQLNYFGFRKIDGKGKFEPCVYHNEELEGKDVEEITKIKR 118
BLAST of mRNA_P-wetherbeei_contig6942.1.1 vs. uniprot
Match: A0A7S2V2P2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2P2_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.020e-22 Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 3
Query: 381 GPKSTTRFLASLVRMVRHEDPQIISWDHGRLVINDPKRLVNEILEKYFRHSNYTSLQRQLNSFGFHKTEGKGRYERSIYTRQGLAGRPIEAILTVTR 671
G +S FL+ LV M++ E P IISW G++ + DP RLV E+L++YFRH+NY S +RQLN FGF K EGKG+ E IY + L G +EAIL + R
Sbjct: 14 GRRSCPEFLSKLVLMLQVEHPDIISWRSGQISLQDPNRLVTEVLKRYFRHANYNSFKRQLNYFGFRKIEGKGKMEPCIYANEDLEGADLEAILDIKR 110
BLAST of mRNA_P-wetherbeei_contig6942.1.1 vs. uniprot
Match: A0A7S2XX45_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX45_9STRA) HSP 1 Score: 108 bits (270), Expect = 4.110e-22 Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = 3
Query: 378 SGPKSTTRFLASLVRMVRHEDPQIISWDHGRLVINDPKRLVNEILEKYFRHSNYTSLQRQLNSFGFHKTEGKGRYERSIYTRQGLAGRPIEAILTVTR 671
SG KS FL+ LV +++ E P II W G++++ DP RLV+E+L+KYFRH+NY S +RQLN FGF K +GKG+ E +Y + L G +EAIL + R
Sbjct: 36 SGRKSCPEFLSKLVLILQAEHPDIIHWKSGQIILQDPVRLVSEVLKKYFRHANYNSFKRQLNYFGFRKIDGKGKMEPCVYANEDLEGSDLEAILDIKR 133
BLAST of mRNA_P-wetherbeei_contig6942.1.1 vs. uniprot
Match: A0A6U1QEX2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QEX2_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.360e-19 Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 3
Query: 402 FLASLVRMVRHEDPQIISWDHGRLVINDPKRLVNEILEKYFRHSNYTSLQRQLNSFGFHKTEGKGRYERSIYTRQGLAGRPIEAILTVTR 671
FL+ LV M R E P +I WD+GR+V+++P L + +L+KYFRHS YTS +RQLN FGF K +GKG+ +Y L G +E +L + R
Sbjct: 21 FLSKLVEMCRTESPDVIRWDYGRIVVDNPPFLCSHVLKKYFRHSRYTSFKRQLNYFGFKKVQGKGKMNPCVYANTELQGADVEELLRMKR 110
BLAST of mRNA_P-wetherbeei_contig6942.1.1 vs. uniprot
Match: A0A4D9D078_9STRA (HSF_DOMAIN domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D078_9STRA) HSP 1 Score: 102 bits (255), Expect = 3.220e-19 Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 3
Query: 402 FLASLVRMVRHEDPQIISWDHGRLVINDPKRLVNEILEKYFRHSNYTSLQRQLNSFGFHKTEGKGRYERSIYTRQGLAGRPIEAILTVTR 671
FL L +M++ EDP +I WD GR+ ++DPK L NE+L KYFRHS Y+S QRQLN FGF KT+GKG+ YT LA ++ +L + R
Sbjct: 238 FLVKLFKMLQCEDPTVICWDSGRIHVHDPKTLGNEVLHKYFRHSKYSSFQRQLNYFGFRKTQGKGKMSACTYTNFDLANSSLKGLLKIKR 327
BLAST of mRNA_P-wetherbeei_contig6942.1.1 vs. uniprot
Match: A0A7S4E822_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E822_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 8.920e-18 Identity = 47/90 (52.22%), Postives = 59/90 (65.56%), Query Frame = 3
Query: 402 FLASLVRMVRHEDPQIISWDHGRLVINDPKRLVNEILEKYFRHSNYTSLQRQLNSFGFHKTEGKGRYERSIYTRQGLAGRPIEAILTVTR 671
FL L+ MV E P +ISW G+L I+DP L + + YFRHSN++S QRQLN+FGF K EGKG+ +Y L GRP EAILT+ R
Sbjct: 15 FLVKLLTMVGDEAPDLISWTGGKLYIHDPVALERK-MSVYFRHSNFSSFQRQLNNFGFRKVEGKGKLAPCMYMHDDLVGRPPEAILTIRR 103
BLAST of mRNA_P-wetherbeei_contig6942.1.1 vs. uniprot
Match: A0A4D9D6V9_9STRA (HSF_DOMAIN domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6V9_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 8.420e-17 Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 3
Query: 393 TTRFLASLVRMVRHEDPQIISWDHGRLVINDPKRLVNEILEKYFRHSNYTSLQRQLNSFGFHKTEGKGRYERSIYTRQGLAGRPIEAILTVTR 671
T FL L R++ +ED II WD+G++ + DP L +L KYFRHS Y+S QRQLN FGF KT+GKG+ YT L+G I+++L+V R
Sbjct: 127 TPEFLVKLHRILLNEDKDIIYWDNGQIHVRDPTVLGQSVLHKYFRHSKYSSFQRQLNYFGFRKTQGKGKMSACTYTNVQLSGGNIKSLLSVKR 219
BLAST of mRNA_P-wetherbeei_contig6942.1.1 vs. uniprot
Match: A0A6V1MA78_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MA78_HETAK) HSP 1 Score: 88.6 bits (218), Expect = 2.870e-15 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 3
Query: 372 EGSGPKSTTR-----FLASLVRMVRH-EDPQIISWDHGRLVINDPKRLVNEILEKYFRHSNYTSLQRQLNSFGFHKTEGKGRYERSIYTRQGLAGRPIEAILTVTRGI 677
E + P S+ R FL LV M++ + II W + ++ + +P + E+L KYFRHS Y+S QRQLN FGF KTEGKG+ +Y+ L GRP+E+IL + R I
Sbjct: 35 EKAHPSSSKRQVCPEFLRKLVDMLKDTSNSSIIEWKNNKIHVYNPHAVCEEVLPKYFRHSKYSSFQRQLNYFGFKKTEGKGKMTPCVYSSLELQGRPLESILEMKRKI 142
BLAST of mRNA_P-wetherbeei_contig6942.1.1 vs. uniprot
Match: A0A7S0FH12_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FH12_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.390e-13 Identity = 42/98 (42.86%), Postives = 55/98 (56.12%), Query Frame = 3
Query: 387 KSTTRFLASLVRMVRHEDP---QIISWDHGRLVINDPKRLVNEILEKYFRHSNYTSLQRQLNSFGFHKTEGKGRYERSIYTRQGLAGRPIEAILTVTR 671
+ FL L RM+ DP +I WD GR+V++DP + E+L KYFRHS Y+S QRQLN FGF K GKG+ Y A + +LT+ R
Sbjct: 14 RPVAEFLFHLTRML--SDPANHHLIEWDAGRIVVHDPPAMETEVLGKYFRHSKYSSFQRQLNYFGFKKISGKGKMSPCSYINDA-ATADLGCLLTIRR 108
BLAST of mRNA_P-wetherbeei_contig6942.1.1 vs. uniprot
Match: A0A7S3Y9Y2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9Y2_HETAK) HSP 1 Score: 83.6 bits (205), Expect = 2.100e-13 Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = 3
Query: 402 FLASLVRMVRHEDPQIISWDHGRLVINDPKRLVNEILEKYFRHSNYTSLQRQLNSFGFHKTEGKGRYERSIYTRQGLAG-RPIEAILTVTRGIPSVSSVSSTESESAGRRSI 734
FL LV ++ HE+ II WD G+++I P +L +IL K+FRHS YTS QRQLN FGF K +GKG+ +Y + L G +IL R P S S +AG ++
Sbjct: 49 FLKKLVEILSHENSSIIQWDKGQILIFSPDKLCEQILGKHFRHSKYTSFQRQLNYFGFKKRKGKGKDGCCVYECRELIGCSSPSSILGRRRRTPKPSPAPSASGSAAGTPAV 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6942.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6942.1.1 >prot_P-wetherbeei_contig6942.1.1 ID=prot_P-wetherbeei_contig6942.1.1|Name=mRNA_P-wetherbeei_contig6942.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=620bp MNVIFQQTKTAVSVQGRPAPVCVSPPCRWLAFSITMSAHIREVWKSFDFSback to top mRNA from alignment at P-wetherbeei_contig6942:273..2674- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6942.1.1 ID=mRNA_P-wetherbeei_contig6942.1.1|Name=mRNA_P-wetherbeei_contig6942.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2402bp|location=Sequence derived from alignment at P-wetherbeei_contig6942:273..2674- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6942:273..2674- >mRNA_P-wetherbeei_contig6942.1.1 ID=mRNA_P-wetherbeei_contig6942.1.1|Name=mRNA_P-wetherbeei_contig6942.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1860bp|location=Sequence derived from alignment at P-wetherbeei_contig6942:273..2674- (Phaeothamnion wetherbeei SAG_119_79)back to top |