mRNA_P-wetherbeei_contig6939.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6939.1.1
Unique NamemRNA_P-wetherbeei_contig6939.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6939.1.1 vs. uniprot
Match: A0A6G5ABM5_RHIMP (RNA-directed DNA polymerase (Fragment) n=2 Tax=Rhipicephalus TaxID=34630 RepID=A0A6G5ABM5_RHIMP)

HSP 1 Score: 194 bits (493), Expect = 3.950e-51
Identity = 135/370 (36.49%), Postives = 191/370 (51.62%), Query Frame = 1 
Query:    1 LSQCYIERGVLKRKQWRSDKRGLRDQY--IVPMALRDVVLLAMHEDATAGHQGMNRTVERLLESFWWPTVTADTAWWCRACLRCQARKGKLKRSLPLCIPRRATA-PGDTLGIDILGPLPTSSEGYMYLLVIIDLFTRWVELAPLTKETNSAEGVAGHIVDLILCRGGAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTSAYRPQSDGQTERVMPQAASYLSMYVSDYQTDWPKYLHLMRLALNTAVCRITGVSPHELATGRSPRLPWSAMAFEPEDCVRRKESAYVADLRARQ-RQLHDIANTSQALLDSKLERRQEHLAPRLQRLTPGTKVWAYATQTPTHIGGHKLVSKLQSKWCGPYEVLEDGSP 1098
            L+  ++  G+L++K +      LR +Y  +VP ALR  +L A+H+D TAGH G++RT+ R+ E ++WP +T D   + R C  CQ RK    R   L  P      P   +G+D+LGP PTS+ G  +++V  D  TR+ E   L K   SA  VA   V+ I+ R GAP  +++DRG  FTA ++QA+  Y +T    T+AY PQ++G TER+    A  LSMYV      W   L  +  A NTAV   T +SP++L  GRSP     AM     D      S Y+   RA + RQL  +   +Q   DS     + +L  R     PG +VW +   TP    G  L  KL  ++ GPY V+    P
Sbjct:  553 LASFFLRNGLLQKKNF----SPLRAKYLLVVPSALRPELLQALHDDPTAGHLGVSRTLARIQERYYWPRLTTDVTRYVRTCRDCQRRKTPPTRPAGLLQPIDPPCRPFQQIGMDLLGPFPTSAFGNKWIVVATDYLTRYAETKALPK--GSASEVAKFFVENIVLRQGAPEVLITDRGTAFTADLTQAILAYSQTNHRRTTAYHPQTNGLTERLNKTIADMLSMYVDVEHKTWDAILPYVTFAYNTAVQETTQISPYKLVYGRSPATTLDAMLPNVTDEENLDVSEYLQ--RAEEARQLARLRIKNQQTTDS----HRYNLRRRFVEYQPGERVWVW---TPIRRRG--LSEKLLRRYLGPYRVVRRLGP 905
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BLAST of mRNA_P-wetherbeei_contig6939.1.1 vs. uniprot
Match: A0A0J7KRA7_LASNI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KRA7_LASNI)

HSP 1 Score: 186 bits (473), Expect = 1.150e-50
Identity = 120/343 (34.99%), Postives = 180/343 (52.48%), Query Frame = 1 
Query:   76 QYIVPMALRDVVLLAMHEDATAGHQGMNRTVERLLESFWWPTVTADTAWWCRACLRCQARKGKL-KRSLPLCIPRRATAPGDTLGIDILGPLPTSSEGYMYLLVIIDLFTRWVELAPLTKETNSAEGVAGHIVDLILCRGGAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTSAYRPQSDGQTERVMPQAASYLSMYVSDYQTDWPKYLHLMRLALNTAVCRITGVSPHELATGRSPRLP-----WSAMAFEPEDCVRRKESAYVADLRARQRQLHDIANTSQALLDSKLERRQEHLAPRLQRLTPGTKVWAYATQTPTHIGGHKLVSKLQSKWCGPYEVLE 1086
            Q +VP      +L  +H+  + GH G+N+T+E++ + F+W T   D   WCR+C  C ARKG   K   PL I     AP + + +DILGPLPT++ G  YLLVI+D FT+WVE  PL         VA   V+  + R G P ++ +D+GK F +K+   L + +  +K  T+A  PQSDGQ ER      SYL+ Y+S+ Q DW +++ +  LA  ++    TGV+P EL   R  RLP      S   FE E+       ++V  LR + + +H        +  S+++   +  A ++     G KVW Y    P  + G     KLQS W GP++V++
Sbjct:  108 QLVVPQKRVKEILEEVHDSPSGGHFGVNKTLEKIRKRFYWATCKQDVEDWCRSCKVCVARKGPAGKGKSPLQI-YNVGAPFERVQMDILGPLPTTTSGNKYLLVIVDCFTKWVEAFPLKNIRTKM--VAEVFVNQFISRHGVPTEVHTDQGKSFESKLFAELSELLGIRKTRTTALHPQSDGQVERQHQTIISYLAKYISENQKDWDRWIPMFLLAYRSSKHENTGVTPAELYFARDLRLPVDLLRGSLPKFEEEESP--LVGSFVKKLREKLKDIHSSVRERMKVKSSRVKAWYDRKARQIL-FQEGQKVWFY---NPRRVKGK--APKLQSNWEGPFQVVK 439
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BLAST of mRNA_P-wetherbeei_contig6939.1.1 vs. uniprot
Match: A0A224Z7V4_9ACAR (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhipicephalus zambeziensis TaxID=60191 RepID=A0A224Z7V4_9ACAR)

HSP 1 Score: 182 bits (463), Expect = 1.270e-50
Identity = 126/338 (37.28%), Postives = 176/338 (52.07%), Query Frame = 1 
Query:    1 LSQCYIERGVLKRKQWRSDKRGLRDQY--IVPMALRDVVLLAMHEDATAGHQGMNRTVERLLESFWWPTVTADTAWWCRACLRCQARKGKLKRSL----PLCIPRRATAPGDTLGIDILGPLPTSSEGYMYLLVIIDLFTRWVELAPLTKETNSAEGVAGHIVDLILCRGGAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTSAYRPQSDGQTERVMPQAASYLSMYVSDYQTDWPKYLHLMRLALNTAVCRITGVSPHELATGRSPRLPWSAMAFEPEDCVRRKESAYVADLRARQ-RQLHDIANTSQALLDSKLERRQEHLAPRLQRLTPGTKVW 993
            L   ++  GVL +K +      LR  Y  +VP ALR  VL A+H+D TAGH G++RT+ R+ E ++WP +TAD   + + C  CQ RK    R      P+  PRR   P   +G+D+LGP PTS+ G  +++V  D  TR+ E   L K   SA  VA   V+ I+ R GAP  +++DRG  FTA ++QA+  Y  T    T+AY PQ++G TER+    A  L+MYV      W   L  +  A NTAV   T ++P++L  GRSP     AM     D      + Y+   RA + RQL  +    Q   DS    R+ +L  R     PG +VW
Sbjct:   17 LESFFLRNGVLLKKNF----SPLRANYLLVVPSALRPEVLDALHDDPTAGHLGLSRTLARIQERYYWPRLTADVTHYVKTCRDCQRRKTPPTRPAGLLQPIEPPRR---PFQQIGMDLLGPFPTSNSGNKWIVVATDYLTRYAETRALPK--GSAAEVAKFFVENIVLRHGAPEVLITDRGTAFTADLTQAILGYSHTSHRRTTAYHPQTNGLTERLNKTIADMLAMYVDVEHKTWDAILPYVTFAYNTAVQETTQLTPYKLVYGRSPATTLDAMLPNVTDEENIDVTTYLQ--RAEEARQLARLRIKKQQRTDS----RRYNLRRRHTEYQPGDRVW 339
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BLAST of mRNA_P-wetherbeei_contig6939.1.1 vs. uniprot
Match: A0A7D9ER82_PARCT (Retrovirus-related Pol poly from transposon (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ER82_PARCT)

HSP 1 Score: 191 bits (484), Expect = 4.510e-50
Identity = 120/360 (33.33%), Postives = 183/360 (50.83%), Query Frame = 1 
Query:   16 IERGVLKRKQWRSDKRGLRDQYIVPMALRDVVLLAMHEDATAGHQGMNRTVERLLESFWWPTVTADTAWWCRACLRCQARKGKLKRSLPLCIPRRAT-APGDTLGIDILGPLPTSSEGYMYLLVIIDLFTRWVELAPLTKETNSAEGVAGHIVDLILCRGGAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTSAYRPQSDGQTERVMPQAASYLSMYVSDYQTDWPKYLHLMRLALNTAVCRITGVSPHELATGRSPRLPWSAMAFEPEDCVRRKESAYVADLRARQRQLHDIANTSQALLDSKLE--RRQEHLAPRLQRLTPGTKVWAYATQTPTHIGGHKLVSKLQSKWCGPYEVLE 1086
            +   +L RK   SD    R Q ++P ALR+ VL+ +H   T GH G+ +T+ER+ E F+WP    D   WC  C  C +RKG + R    C+ +    AP + + ID++GPL  S++G  YLLV++D F++W E   L  +   A+ VA  IV+  +CR G P ++ SD+G +F + V Q +   +  KK  T+   P+SDG  ER      + LS++V+++Q DW KY+ L+ +A  TA    T  +P  L  GR  R P   +   P+  V    S YV +L+   +  HD A      ++   E  R++  +         G +VW Y    P    G  +  KL   W GPY V++
Sbjct:  473 LRNDILYRKWESSDGTTTRFQLVLPKALREEVLMHLHNHPTGGHFGVKKTLERVKERFYWPRCREDVTLWCSTCSECSSRKGPVTRQ-KACLGKYVVGAPLERVAIDVMGPLVRSTKGNRYLLVVMDYFSKWPEAYALPNQ--EAKTVATVIVNEFVCRFGVPLELHSDQGTNFESAVFQEMCSLLGIKKTRTTPLHPESDGMVERYNRTLKTQLSLFVAEHQKDWDKYVPLLLMAYRTATHASTHFTPARLMMGREIRTPIDLVYERPDPEVLESYSTYVRELQENLQVTHDFARK---YIEQSFESMRKRYDVDSSACIFNEGDQVWLY---NPRKKKGRSV--KLMRPWEGPYVVIK 821
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BLAST of mRNA_P-wetherbeei_contig6939.1.1 vs. uniprot
Match: A0A7D9H748_PARCT (RNA-directed DNA polymerase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9H748_PARCT)

HSP 1 Score: 189 bits (481), Expect = 2.530e-49
Identity = 119/359 (33.15%), Postives = 180/359 (50.14%), Query Frame = 1 
Query:   16 IERGVLKRKQWRSDKRGLRDQYIVPMALRDVVLLAMHEDATAGHQGMNRTVERLLESFWWPTVTADTAWWCRACLRCQARKGKLKRSLPLCIPRRATAPGDTLGIDILGPLPTSSEGYMYLLVIIDLFTRWVELAPLTKETNSAEGVAGHIVDLILCRGGAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTSAYRPQSDGQTERVMPQAASYLSMYVSDYQTDWPKYLHLMRLALNTAVCRITGVSPHELATGRSPRLPWSAMAFEPEDCVRRKESAYVADLRARQRQLHDIANTSQALLDSKLE--RRQEHLAPRLQRLTPGTKVWAYATQTPTHIGGHKLVSKLQSKWCGPYEVLE 1086
            +   +L RK   SD    R Q ++P ALR+ VL+ +H   T GH G+ +T+ER+ E F+WP    D   WC  C  C +RKG + R           AP + + ID++GPL  S++G  YLLV++D F++W E   L  +   A+ VA  IV+  +CR G P ++ SD+G +F + V Q +   +  KK  T+   P+SDG  ER      + LS++V+++Q DW KY+ L+ +A  TA    T  +P  L  GR  R P   +   P+  V    S YV +L+   +  HD A      ++   E  R++  +         G +VW Y    P    G  +  KL   W GPY V++
Sbjct:  814 LRNDILCRKWESSDGTTTRFQLVLPKALREEVLMHLHNHPTGGHFGVKKTLERVKERFYWPRCREDVTLWCSTCSECSSRKGPVTRQKARLGKYVVGAPLERVAIDVMGPLVRSTKGNRYLLVVMDYFSKWPEAYALPNQ--EAKTVATVIVNEFVCRFGVPLELHSDQGTNFESAVFQEMCSLLGIKKTRTTPLHPESDGMVERYNRTLKTQLSLFVAEHQKDWDKYVPLLLMAYRTATHASTHFTPARLMMGREIRTPIDLVYERPDPEVVESYSTYVRELQENLQVTHDFARK---YIEQSFESMRKRYDVDSSACIFNEGDQVWLY---NPRKKKGRSV--KLMRPWEGPYVVIK 1162
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BLAST of mRNA_P-wetherbeei_contig6939.1.1 vs. uniprot
Match: A0A4Y2QQP2_ARAVE (RNA-directed DNA polymerase (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2QQP2_ARAVE)

HSP 1 Score: 180 bits (457), Expect = 9.610e-49
Identity = 118/361 (32.69%), Postives = 177/361 (49.03%), Query Frame = 1 
Query:    4 SQCYIERGVLKRKQWRSDKRGLRDQYIVPMALRDVVLLAMHEDATAGHQGMNRTVERLLESFWWPTVTADTAWWCRACLRCQARKGKLKRSLPLCIPRRATAPGDTLGIDILGPLPTSSEGYMYLLVIIDLFTRWVELAPLTKETNSAEGVAGHIVDLILCRGGAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTSAYRPQSDGQTERVMPQAASYLSMYVSDYQTDWPKYLHLMRLALNTAVCRITGVSPHELATGRSPRLPWSAMAFEPEDCVRRKESAYVADLRARQRQLHDIANTSQALLDSKLERRQEHLAPRLQRLTPGTKVWAYATQTPTHIGGHKLVSKLQSKWCGPYEVLE 1086
            +  +++ GVL RK    D    R Q I+P +    VL   H+ A+ GH G+ +T  +  E F+W  + AD   WCR C  C ARKG   R+          AP + + +DILGPLP +++G  Y+LV++D FT+W E  P+  +  S   VA  +V   + R G P  + SD+G +F + +   L   +   K  T+A  P+SDG  ER      ++LS++VS  QTDW  +L L  LA  +A    TG +P ++  GR+ RLP   +   P D      + Y+ +L AR   +H  A     L   +++ R +  A          +VW Y    P    G  L  KLQ  W GPY +++
Sbjct:   12 NSLHLKDGVLYRKWESDDGSSCRWQLILPKSRIQEVLRETHDSASGGHFGVMKTFSKTRERFYWDRLRADVEKWCRECHACGARKGPKTRTKGRLQRYNVGAPFERMALDILGPLPVTTKGNRYVLVLMDYFTKWPEAIPIPDQEAST--VAEELVRAWISRYGVPMILHSDQGTNFNSALFTELCKLLGILKTRTTALHPESDGMVERFNRTILNHLSLFVSKNQTDWDTHLPLFLLAYRSADHEATGCTPADMLFGRTLRLPCDILFGRPSDTPS-SPNEYLNNLEARLESVHAFARERIKLASERMKTRYDSGATG-HHFKERDQVWMY---NPKRRRG--LSPKLQQNWEGPYTIVK 363
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BLAST of mRNA_P-wetherbeei_contig6939.1.1 vs. uniprot
Match: A0A4Y2DJZ0_ARAVE (RNA-directed DNA polymerase (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2DJZ0_ARAVE)

HSP 1 Score: 184 bits (467), Expect = 1.690e-48
Identity = 125/382 (32.72%), Postives = 187/382 (48.95%), Query Frame = 1 
Query:   13 YIERGVLKRKQWRSDKRGLRDQYIVPMALRDVVLLAMHEDATAGHQGMNRTVERLLESFWWPTVTADTAWWCRACLRCQARKGKLKRSLPLCIPRRATAPGDTLGIDILGPLPTSSEGYMYLLVIIDLFTRWVELAPLTKETNSAEGVAGHIVDLILCRGGAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTSAYRPQSDGQTERVMPQAASYLSMYVSDYQTDWPKYLHLMRLALNTAVCRITGVSPHELATGRSPRLPWSAMAFEPEDCVRRKESAYVADLRARQRQLHDIANTSQALLDSKLERRQEHLAPRLQRLTPGTKVWAYATQTPTHIGGHKLVSKLQSKWCGPYEVLEDGSPTAVNARIAMPGAGPRGKAVH 1158
            +++ GVL RK    D    R Q I+P +    VL   H+ A+ GH G+ +T+ +  E F+W  + AD   WCR C  C ARKG   R+          AP + + +DILGPLP +++G  Y+LV++D FT+W E  P+  +  S   VA  +V   + R G P  + SD+G +F + +   L   +   K  T+A  P+SDG  ER      ++LS++VS  QTDW  +L L  LA  +A    TG +P ++  GR+ RLP   +   P D      + Y+ +L AR   +H  A     L   +++ R +  A        G +VW Y    P    G  L  KLQ  W GPY +++  +      + A P A P  K +H
Sbjct:  279 HLKDGVLYRKWESDDGSSCRWQLILPKSRIQEVLRETHDSASGGHFGVMKTLSKTRERFYWDRLRADVEKWCRECHACGARKGPKTRTKGRLQRYNVGAPFERMALDILGPLPVTTKGNRYVLVLMDYFTKWPEAIPIPDQEAST--VAEELVRAWISRYGVPMILHSDQGTNFNSALFTELCKLLGILKTRTTALHPESDGMVERFNRTILNHLSLFVSKNQTDWDTHLPLFLLAYRSADHEATGCTPADMLFGRTLRLPCDILFGRPSDTPS-SPNEYLNNLEARLESVHAFARERIKLASERMKTRYDSGATG-HHFKEGDQVWMY---NPKRRRG--LSPKLQQNWEGPYTIVKKLNDVIYRVQRA-PNAKP--KVIH 648
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BLAST of mRNA_P-wetherbeei_contig6939.1.1 vs. uniprot
Match: A0A4Y2FVY8_ARAVE (RNA-directed DNA polymerase n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2FVY8_ARAVE)

HSP 1 Score: 184 bits (467), Expect = 2.220e-48
Identity = 118/358 (32.96%), Postives = 179/358 (50.00%), Query Frame = 1 
Query:   13 YIERGVLKRKQWRSDKRGLRDQYIVPMALRDVVLLAMHEDATAGHQGMNRTVERLLESFWWPTVTADTAWWCRACLRCQARKGKLKRSLPLCIPRRATAPGDTLGIDILGPLPTSSEGYMYLLVIIDLFTRWVELAPLTKETNSAEGVAGHIVDLILCRGGAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTSAYRPQSDGQTERVMPQAASYLSMYVSDYQTDWPKYLHLMRLALNTAVCRITGVSPHELATGRSPRLPWSAMAFEPEDCVRRKESAYVADLRARQRQLHDIANTSQALLDSKLERRQEHLAPRLQRLTPGTKVWAYATQTPTHIGGHKLVSKLQSKWCGPYEVLE 1086
            +++ GVL RK    D    R Q I+P +    VL   H+ A+ GH G+ +T+ +  E F+W  + AD   WCR C  C ARKG   R+          AP + + +DILGPLP +++G  Y+LV++D FT+W E  P+  +  S   VA  ++   + R G P  + SD+G +F + +   L   +   K  T+A  P+SDG  ER     +++LS++VS  QTDW  +L L  LA  +A    TG +P ++  GR+ RLP   +   P D      + Y+ +L AR   +H  A     L   +++ R +  A        G +VW Y    P    G  L  KLQ  W GPY +++
Sbjct:  302 HLKDGVLYRKWESDDGSSCRWQLILPKSRIQEVLRETHDSASGGHFGVMKTLSKTRERFYWDRLRADVEKWCRECHACGARKGPKTRTKGRLQRYNVGAPFERMALDILGPLPVTTKGNRYVLVLMDYFTKWPEAIPIPDQEAST--VAEELIRAWISRYGVPMILHSDQGTNFNSALFTELCKLLGILKTRTTALHPESDGMVERFNRTISNHLSLFVSKNQTDWDAHLPLFLLAYRSADHEATGCTPADMLFGRTLRLPCDILFGRPSDTPS-SPNEYLNNLEARLESVHAFARERIKLTSERMKTRYDSGATG-HHFKEGDQVWMY---NPKRRRG--LSPKLQQNWEGPYTIVK 650
[Close]
BLAST of mRNA_P-wetherbeei_contig6939.1.1 vs. uniprot
Match: A0A1B6JGI3_9HEMI (RNA-directed DNA polymerase (Fragment) n=2 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6JGI3_9HEMI)

HSP 1 Score: 185 bits (469), Expect = 2.420e-48
Identity = 118/379 (31.13%), Postives = 192/379 (50.66%), Query Frame = 1 
Query:   64 GLRDQYIVPMALRDVVLLAMHEDATAGHQGMNRTVERLLESFWWPTVTADTAWWCRACLRCQARKGKLKRSLPL-CIPRRATAPGDTLGIDILGPLPTSSEGYMYLLVIIDLFTRWVELAPLTKETNSAEGVAGHIVDLILCRGGAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTSAYRPQSDGQTERVMPQAASYLSMYVSDYQTDWPKYLHLMRLALNTAVCRITGVSPHELATGRSPRLPWSA--MAFEPEDCVRRKESAYVADLRARQRQLHDIANTSQALLDSKLERRQEHLAPRLQRLTPGTKVWAYATQTPTHIGGHKLVSKLQSKWCGPYEVLEDGSPTAVNARIAMPGAGPRGKAVHKCYLRKFIDPR 1191
            G +   +VP+ L   V+   H+  TAGH G+ +T+ER+ E FWW  +  D   + R C  C  R    K   PL  I     AP + +  DI+GPLPTS+ G +Y+L ++D FTR+ E  PL  +T  AE VA  +V  ++ + G P+ +++D+G +FT+ +   L  ++  +K  T+ + PQS+G+ ERV    A  LS +V+ +QTDW +Y+  + +A N+     TG SP+E+  GR   +P  A     E  D      + +V DLR++ ++  ++A   ++    + ER+      +++    G  V  +       IG H+ V KL   W GPY++L   SP  V  +I           +  C  R  + P+
Sbjct:  340 GGKKSLVVPINLTSEVIRLNHDLPTAGHAGVAKTLERVKEKFWWKGMDKDVLDYVRTCRSCSQRTDYGKTKAPLGTIFNEPKAPFEVIAADIVGPLPTSASGNVYILSVMDHFTRYCEFVPLPDQT--AESVARAVVQRVITKFGVPKSLITDQGANFTSDLICHLCKFLHIRKIQTTGFHPQSNGRLERVHSTIARMLSHFVNRHQTDWDEYIPYVTMAYNSQAHETTGFSPYEMVFGRKMEMPMEADLTITEASDLY----NNHVEDLRSKLKETFELAAKRKSAARKRYERQYNKKTNKVE-YHEGQMVLLHVPS----IGRHR-VKKLSKLWKGPYKILRVLSPLNVVLKIRKREVTVHVNRIKPCLRRAPVAPQ 706
[Close]
BLAST of mRNA_P-wetherbeei_contig6939.1.1 vs. uniprot
Match: A0A4Y1ZXC9_ARAVE (RNA-directed DNA polymerase (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y1ZXC9_ARAVE)

HSP 1 Score: 179 bits (455), Expect = 3.120e-48
Identity = 116/358 (32.40%), Postives = 175/358 (48.88%), Query Frame = 1 
Query:   13 YIERGVLKRKQWRSDKRGLRDQYIVPMALRDVVLLAMHEDATAGHQGMNRTVERLLESFWWPTVTADTAWWCRACLRCQARKGKLKRSLPLCIPRRATAPGDTLGIDILGPLPTSSEGYMYLLVIIDLFTRWVELAPLTKETNSAEGVAGHIVDLILCRGGAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTSAYRPQSDGQTERVMPQAASYLSMYVSDYQTDWPKYLHLMRLALNTAVCRITGVSPHELATGRSPRLPWSAMAFEPEDCVRRKESAYVADLRARQRQLHDIANTSQALLDSKLERRQEHLAPRLQRLTPGTKVWAYATQTPTHIGGHKLVSKLQSKWCGPYEVLE 1086
            +++ GVL RK    D      Q I+P      VL   H+ A+ GH G+ +T+ +  E F+W  + AD   WCR C  C ARKG   R+         +AP + + +DILGPLP +++G  Y+LV++D FT+W E  P+  +  S   VA   V   + R G P  + SD+G +F + +   L   +   K  T+A  P+SDG  ER      ++LS++VS  QTDW  +L L  LA  +A   +TG +P ++  GR+ R P       P D      + ++ +L AR   +H  A     L   +++ R +  A        G +VW Y    P    G  L  KLQ  W GPY +++
Sbjct:   76 HLKDGVLYRKWESDDGSSCCWQLILPKGRIQEVLQETHDSASGGHFGVMKTLSKTRERFYWDRLRADVEKWCRECQACGARKGPKARTKGRLQRYNVSAPFERMALDILGPLPVTTKGNRYVLVLMDYFTKWPEAIPIPDQEAST--VAEEFVRARISRYGVPMILHSDQGTNFNSALFTELCKLLGILKTRTTALHPESDGMVERFNRTCLNHLSLFVSKNQTDWDTHLPLFLLAYRSADHEVTGFTPADVLFGRTLRFPCDXXXXRPSDTPS-SPNEFLNNLEARLESVHAFATERIKLASERMKTRYDSGATG-HHFKEGDQVWMY---NPKQWRG--LSPKLQQNWEGPYTIVK 424
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6939.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G5ABM5_RHIMP3.950e-5136.49RNA-directed DNA polymerase (Fragment) n=2 Tax=Rhi... [more]
A0A0J7KRA7_LASNI1.150e-5034.99RNA-directed DNA polymerase (Fragment) n=1 Tax=Las... [more]
A0A224Z7V4_9ACAR1.270e-5037.28RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhi... [more]
A0A7D9ER82_PARCT4.510e-5033.33Retrovirus-related Pol poly from transposon (Fragm... [more]
A0A7D9H748_PARCT2.530e-4933.15RNA-directed DNA polymerase n=1 Tax=Paramuricea cl... [more]
A0A4Y2QQP2_ARAVE9.610e-4932.69RNA-directed DNA polymerase (Fragment) n=1 Tax=Ara... [more]
A0A4Y2DJZ0_ARAVE1.690e-4832.72RNA-directed DNA polymerase (Fragment) n=1 Tax=Ara... [more]
A0A4Y2FVY8_ARAVE2.220e-4832.96RNA-directed DNA polymerase n=1 Tax=Araneus ventri... [more]
A0A1B6JGI3_9HEMI2.420e-4831.13RNA-directed DNA polymerase (Fragment) n=2 Tax=Hom... [more]
A0A4Y1ZXC9_ARAVE3.120e-4832.40RNA-directed DNA polymerase (Fragment) n=1 Tax=Ara... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6939contigP-wetherbeei_contig6939:931..2142 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog7668.SPU_001414-tr
PFAMsRVT_1,SCAN,gag-asp_proteas,rve,zf-CCHC,zf-H2C2
Model size1212
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.18e-41
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38F42@33154|Opisthokonta,3BA5H@33208|Metazoa,3CWAK@33213|Bilateria
DescriptionK02A2.6-like
Cds size1212
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186947.076637-CDS-P-wetherbeei_contig6939:930..21421683186947.076637-CDS-P-wetherbeei_contig6939:930..2142Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6939 931..2142 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6939.1.1prot_P-wetherbeei_contig6939.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6939 931..2142 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6939.1.1

>prot_P-wetherbeei_contig6939.1.1 ID=prot_P-wetherbeei_contig6939.1.1|Name=mRNA_P-wetherbeei_contig6939.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=404bp
LSQCYIERGVLKRKQWRSDKRGLRDQYIVPMALRDVVLLAMHEDATAGHQ
GMNRTVERLLESFWWPTVTADTAWWCRACLRCQARKGKLKRSLPLCIPRR
ATAPGDTLGIDILGPLPTSSEGYMYLLVIIDLFTRWVELAPLTKETNSAE
GVAGHIVDLILCRGGAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTSAY
RPQSDGQTERVMPQAASYLSMYVSDYQTDWPKYLHLMRLALNTAVCRITG
VSPHELATGRSPRLPWSAMAFEPEDCVRRKESAYVADLRARQRQLHDIAN
TSQALLDSKLERRQEHLAPRLQRLTPGTKVWAYATQTPTHIGGHKLVSKL
QSKWCGPYEVLEDGSPTAVNARIAMPGAGPRGKAVHKCYLRKFIDPRETP
PTLP
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mRNA from alignment at P-wetherbeei_contig6939:931..2142+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6939.1.1 ID=mRNA_P-wetherbeei_contig6939.1.1|Name=mRNA_P-wetherbeei_contig6939.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1212bp|location=Sequence derived from alignment at P-wetherbeei_contig6939:931..2142+ (Phaeothamnion wetherbeei SAG_119_79)
CTGAGCCAATGCTACATCGAGCGAGGAGTGCTGAAGCGGAAACAATGGCG
CAGCGACAAGCGAGGCCTGCGAGATCAGTACATTGTACCCATGGCGCTGA
GGGACGTGGTGTTGTTGGCAATGCACGAGGACGCGACGGCAGGGCATCAA
GGCATGAACCGCACAGTGGAGCGGCTGCTCGAGAGCTTCTGGTGGCCGAC
AGTGACGGCGGACACGGCGTGGTGGTGTAGAGCCTGTCTCAGGTGCCAGG
CGCGTAAGGGCAAGCTCAAGCGCTCACTACCGCTGTGCATACCAAGGCGC
GCGACTGCGCCGGGCGACACGCTGGGCATCGACATACTGGGACCGCTGCC
GACATCGAGCGAGGGATACATGTACCTGCTAGTCATCATCGACCTGTTCA
CGCGCTGGGTGGAGCTGGCACCGCTCACGAAGGAGACGAACTCTGCGGAA
GGCGTGGCGGGGCACATCGTCGACCTCATCCTCTGCAGGGGTGGAGCGCC
TCGCAAGATCGTGTCGGACAGGGGGAAGCACTTCACGGCGAAGGTCTCTC
AGGCGCTGTACGACTACATGCGCACCAAGAAGGCGACGACCTCGGCGTAC
AGACCACAGTCGGACGGGCAAACGGAGCGCGTCATGCCGCAAGCTGCATC
CTACCTCTCGATGTACGTGTCGGACTATCAGACGGACTGGCCCAAGTACT
TACACCTGATGCGCCTCGCGCTCAACACCGCCGTCTGCCGCATCACGGGA
GTTTCGCCGCACGAGCTCGCGACGGGCAGGTCACCACGCCTGCCGTGGTC
AGCCATGGCGTTCGAGCCAGAGGACTGTGTCAGGCGCAAGGAGTCAGCTT
ATGTGGCAGATCTTCGCGCGCGCCAGAGACAGCTGCACGACATCGCCAAC
ACTAGCCAGGCGCTGCTGGATAGCAAGCTTGAAAGGCGCCAAGAGCATCT
CGCGCCACGCCTTCAGCGCCTCACGCCAGGCACCAAGGTGTGGGCTTACG
CTACACAAACACCAACGCACATAGGTGGGCACAAGCTGGTTAGCAAGTTG
CAGAGCAAGTGGTGCGGCCCGTACGAGGTGTTGGAGGACGGCAGCCCGAC
TGCAGTCAACGCGCGCATCGCCATGCCAGGCGCAGGTCCACGAGGCAAGG
CGGTACACAAGTGCTACCTGCGCAAGTTCATCGACCCGCGCGAGACGCCA
CCGACGCTGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6939:931..2142+

>mRNA_P-wetherbeei_contig6939.1.1 ID=mRNA_P-wetherbeei_contig6939.1.1|Name=mRNA_P-wetherbeei_contig6939.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1212bp|location=Sequence derived from alignment at P-wetherbeei_contig6939:931..2142+ (Phaeothamnion wetherbeei SAG_119_79)
CTGAGCCAATGCTACATCGAGCGAGGAGTGCTGAAGCGGAAACAATGGCG
CAGCGACAAGCGAGGCCTGCGAGATCAGTACATTGTACCCATGGCGCTGA
GGGACGTGGTGTTGTTGGCAATGCACGAGGACGCGACGGCAGGGCATCAA
GGCATGAACCGCACAGTGGAGCGGCTGCTCGAGAGCTTCTGGTGGCCGAC
AGTGACGGCGGACACGGCGTGGTGGTGTAGAGCCTGTCTCAGGTGCCAGG
CGCGTAAGGGCAAGCTCAAGCGCTCACTACCGCTGTGCATACCAAGGCGC
GCGACTGCGCCGGGCGACACGCTGGGCATCGACATACTGGGACCGCTGCC
GACATCGAGCGAGGGATACATGTACCTGCTAGTCATCATCGACCTGTTCA
CGCGCTGGGTGGAGCTGGCACCGCTCACGAAGGAGACGAACTCTGCGGAA
GGCGTGGCGGGGCACATCGTCGACCTCATCCTCTGCAGGGGTGGAGCGCC
TCGCAAGATCGTGTCGGACAGGGGGAAGCACTTCACGGCGAAGGTCTCTC
AGGCGCTGTACGACTACATGCGCACCAAGAAGGCGACGACCTCGGCGTAC
AGACCACAGTCGGACGGGCAAACGGAGCGCGTCATGCCGCAAGCTGCATC
CTACCTCTCGATGTACGTGTCGGACTATCAGACGGACTGGCCCAAGTACT
TACACCTGATGCGCCTCGCGCTCAACACCGCCGTCTGCCGCATCACGGGA
GTTTCGCCGCACGAGCTCGCGACGGGCAGGTCACCACGCCTGCCGTGGTC
AGCCATGGCGTTCGAGCCAGAGGACTGTGTCAGGCGCAAGGAGTCAGCTT
ATGTGGCAGATCTTCGCGCGCGCCAGAGACAGCTGCACGACATCGCCAAC
ACTAGCCAGGCGCTGCTGGATAGCAAGCTTGAAAGGCGCCAAGAGCATCT
CGCGCCACGCCTTCAGCGCCTCACGCCAGGCACCAAGGTGTGGGCTTACG
CTACACAAACACCAACGCACATAGGTGGGCACAAGCTGGTTAGCAAGTTG
CAGAGCAAGTGGTGCGGCCCGTACGAGGTGTTGGAGGACGGCAGCCCGAC
TGCAGTCAACGCGCGCATCGCCATGCCAGGCGCAGGTCCACGAGGCAAGG
CGGTACACAAGTGCTACCTGCGCAAGTTCATCGACCCGCGCGAGACGCCA
CCGACGCTGCCG
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