mRNA_P-wetherbeei_contig6922.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6922.3.1
Unique NamemRNA_P-wetherbeei_contig6922.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6922.3.1 vs. uniprot
Match: A0A352KFE0_9PROT (Fe-S cluster assembly protein SufB (Fragment) n=10 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KFE0_9PROT)

HSP 1 Score: 466 bits (1198), Expect = 1.600e-163
Identity = 227/242 (93.80%), Postives = 237/242 (97.93%), Query Frame = 1 
Query:    1 TAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNHQQADTGTKMIHLGRNTTSRIVAKGISAGASQSTYRGLVSIHPKAEGARNHTQCDSLLIGDKCGAHTVPYIEVRNPAAQVEHEATTSKLSEEQLFYCRQRGLDAESAVALLVNGFCREVLQHLPMEFAVEAQKLVGVSLEGSVG 726
            TAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDK GRGGIYNFVTKRGACRGRNSKISWTQVETGSA+TWKYPSCILQGDNSVGEF+SIAITNN QQADTGTKMIHLGRNT SRI+AKGISAG SQSTYRGLVS+HPKAEGARNHTQCDSLLIGD+CGAHTVPYIEV+NP+AQ+EHEATTSKLSEEQLFYCRQRGLDAE+AVALLVNGFC+EVLQ LPMEFAVEAQKLVGVSLEGSVG
Sbjct:  134 TAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKQGRGGIYNFVTKRGACRGRNSKISWTQVETGSAVTWKYPSCILQGDNSVGEFFSIAITNNMQQADTGTKMIHLGRNTKSRIIAKGISAGRSQSTYRGLVSVHPKAEGARNHTQCDSLLIGDECGAHTVPYIEVKNPSAQIEHEATTSKLSEEQLFYCRQRGLDAEAAVALLVNGFCKEVLQKLPMEFAVEAQKLVGVSLEGSVG 375
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BLAST of mRNA_P-wetherbeei_contig6922.3.1 vs. uniprot
Match: A0A545TPB1_9PROT (Fe-S cluster assembly protein SufB n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TPB1_9PROT)

HSP 1 Score: 437 bits (1125), Expect = 8.330e-151
Identity = 213/242 (88.02%), Postives = 230/242 (95.04%), Query Frame = 1 
Query:    1 TAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNHQQADTGTKMIHLGRNTTSRIVAKGISAGASQSTYRGLVSIHPKAEGARNHTQCDSLLIGDKCGAHTVPYIEVRNPAAQVEHEATTSKLSEEQLFYCRQRGLDAESAVALLVNGFCREVLQHLPMEFAVEAQKLVGVSLEGSVG 726
            TAPMRDENQLHAAVVEL+VLDDAEIKYSTVQNWYPGD++G GGIYNFVTKRGACRG+NSKISWTQVETGSA+TWKYPSCILQGDNSVGEFYSIAITNN QQADTGTKMIHLG+NT+SRI+AKGISAG SQSTYRGLV +  KA+GARN+TQCDSLLIGDKCGAHTVPYIE RN +AQVEHEATTSK+SE+QLFYCRQRG+  E AVAL+VNGFCREVLQ LPMEFAVEAQKLVG+SLEGSVG
Sbjct:  243 TAPMRDENQLHAAVVELIVLDDAEIKYSTVQNWYPGDENGIGGIYNFVTKRGACRGKNSKISWTQVETGSAVTWKYPSCILQGDNSVGEFYSIAITNNMQQADTGTKMIHLGKNTSSRIIAKGISAGKSQSTYRGLVRMGAKAKGARNYTQCDSLLIGDKCGAHTVPYIESRNSSAQVEHEATTSKISEDQLFYCRQRGIGEEDAVALVVNGFCREVLQQLPMEFAVEAQKLVGISLEGSVG 484
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BLAST of mRNA_P-wetherbeei_contig6922.3.1 vs. uniprot
Match: A0A839STJ0_9HYPH (Fe-S cluster assembly protein SufB n=1 Tax=Limibacillus halophilus TaxID=1579333 RepID=A0A839STJ0_9HYPH)

HSP 1 Score: 437 bits (1123), Expect = 1.730e-150
Identity = 212/242 (87.60%), Postives = 226/242 (93.39%), Query Frame = 1 
Query:    1 TAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNHQQADTGTKMIHLGRNTTSRIVAKGISAGASQSTYRGLVSIHPKAEGARNHTQCDSLLIGDKCGAHTVPYIEVRNPAAQVEHEATTSKLSEEQLFYCRQRGLDAESAVALLVNGFCREVLQHLPMEFAVEAQKLVGVSLEGSVG 726
            TAPMRDENQLHAAVVELV LDDAEIKYSTVQNWYPGD++G GGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNN QQADTGTKMIHLG+NT SRI++KGISAG S  TYRGLV +  KAEGARNHTQCDSLLIGD+CGAHT PYIE +NP AQ+EHEATTS++SE+QLFYCRQRGL AE AVAL+VNGFCREVLQ LPMEFAVEAQKLVG+SLEGSVG
Sbjct:  244 TAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGVGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNMQQADTGTKMIHLGKNTRSRIISKGISAGRSNQTYRGLVRMSAKAEGARNHTQCDSLLIGDQCGAHTTPYIESKNPTAQIEHEATTSRISEDQLFYCRQRGLSAEDAVALVVNGFCREVLQQLPMEFAVEAQKLVGISLEGSVG 485
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BLAST of mRNA_P-wetherbeei_contig6922.3.1 vs. uniprot
Match: A0A239PSI8_9PROT (Iron-regulated ABC transporter membrane component SufB n=1 Tax=Amphiplicatus metriothermophilus TaxID=1519374 RepID=A0A239PSI8_9PROT)

HSP 1 Score: 436 bits (1121), Expect = 4.540e-150
Identity = 214/242 (88.43%), Postives = 224/242 (92.56%), Query Frame = 1 
Query:    1 TAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNHQQADTGTKMIHLGRNTTSRIVAKGISAGASQSTYRGLVSIHPKAEGARNHTQCDSLLIGDKCGAHTVPYIEVRNPAAQVEHEATTSKLSEEQLFYCRQRGLDAESAVALLVNGFCREVLQHLPMEFAVEAQKLVGVSLEGSVG 726
            TAPMRDENQLHAAVVELV  DDAEIKYSTVQNWYPGDKDG+GGIYNFVTKRG CRGRNSKISWTQVETGSAITWKYPSCIL+GDNSVGEFYSIAITNNHQQADTGTKMIHLG+NT SRI+AKGISAG S STYRGLVSIH  A GARN TQCDSLLIGD+CGAHT+PYIE +NP A +EHEATTS+LSE+QLFYCRQRGL  E AVALLVNGFCREVLQ LPMEFAVEAQKLV VSLEGSVG
Sbjct:  252 TAPMRDENQLHAAVVELVAEDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGRNSKISWTQVETGSAITWKYPSCILKGDNSVGEFYSIAITNNHQQADTGTKMIHLGKNTRSRIIAKGISAGKSNSTYRGLVSIHRNAAGARNFTQCDSLLIGDQCGAHTIPYIESKNPGAILEHEATTSRLSEDQLFYCRQRGLSEEEAVALLVNGFCREVLQELPMEFAVEAQKLVSVSLEGSVG 493
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BLAST of mRNA_P-wetherbeei_contig6922.3.1 vs. uniprot
Match: A0A3M0XYS4_9PROT (Fe-S cluster assembly protein SufB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0XYS4_9PROT)

HSP 1 Score: 435 bits (1119), Expect = 6.780e-150
Identity = 210/242 (86.78%), Postives = 226/242 (93.39%), Query Frame = 1 
Query:    1 TAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNHQQADTGTKMIHLGRNTTSRIVAKGISAGASQSTYRGLVSIHPKAEGARNHTQCDSLLIGDKCGAHTVPYIEVRNPAAQVEHEATTSKLSEEQLFYCRQRGLDAESAVALLVNGFCREVLQHLPMEFAVEAQKLVGVSLEGSVG 726
            TAPMRDE+QLHAAVVEL+ LDDAEIKYSTVQNWYPGD +GRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYS+AITNN+QQADTGTKMIH+GRNT SRI++KGISAG +Q TYRGLV I PKA GARNHTQCDSLLIGD CGAHTVPYIE RN +A VEHEATTSK+S++QLFYCRQRG+  E AVAL+VNGFCREVLQ LPMEFAVEAQKLVG+SLEGSVG
Sbjct:  243 TAPMRDEHQLHAAVVELIALDDAEIKYSTVQNWYPGDAEGRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSVAITNNYQQADTGTKMIHIGRNTRSRIISKGISAGRAQQTYRGLVRISPKATGARNHTQCDSLLIGDSCGAHTVPYIESRNRSAIVEHEATTSKISDDQLFYCRQRGISEEDAVALVVNGFCREVLQQLPMEFAVEAQKLVGISLEGSVG 484
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BLAST of mRNA_P-wetherbeei_contig6922.3.1 vs. uniprot
Match: A0A2D6G3Q7_9PROT (Fe-S cluster assembly protein SufB n=3 Tax=unclassified Rhodospirillaceae TaxID=41296 RepID=A0A2D6G3Q7_9PROT)

HSP 1 Score: 434 bits (1117), Expect = 1.510e-149
Identity = 210/242 (86.78%), Postives = 228/242 (94.21%), Query Frame = 1 
Query:    1 TAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNHQQADTGTKMIHLGRNTTSRIVAKGISAGASQSTYRGLVSIHPKAEGARNHTQCDSLLIGDKCGAHTVPYIEVRNPAAQVEHEATTSKLSEEQLFYCRQRGLDAESAVALLVNGFCREVLQHLPMEFAVEAQKLVGVSLEGSVG 726
            TAPMRDENQLHAAVVELV +DDAEIKYSTVQNWYPGD++G GGIYNFVTKRGACRGR+SKISWTQVETGSAITWKYPSCILQGDNSVGEFYS+AITNN+QQADTGTKMIHLGRNT SRI++KGISAG SQSTYRGLV + P A GARNHTQCDSLLIG +CGAHTVPYIE RNP+A+VEHEATTSK++E+QLFYCRQRG+  E AVAL+VNGFCREVLQ LPMEFAVEAQKLVG+SLEGSVG
Sbjct:  246 TAPMRDENQLHAAVVELVAMDDAEIKYSTVQNWYPGDENGVGGIYNFVTKRGACRGRDSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSVAITNNYQQADTGTKMIHLGRNTKSRIISKGISAGKSQSTYRGLVKMMPGAGGARNHTQCDSLLIGKECGAHTVPYIESRNPSAKVEHEATTSKIAEDQLFYCRQRGMSEEEAVALIVNGFCREVLQELPMEFAVEAQKLVGISLEGSVG 487
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BLAST of mRNA_P-wetherbeei_contig6922.3.1 vs. uniprot
Match: A0A3A0F221_9PROT (Fe-S cluster assembly protein SufB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0F221_9PROT)

HSP 1 Score: 433 bits (1114), Expect = 3.760e-149
Identity = 209/242 (86.36%), Postives = 225/242 (92.98%), Query Frame = 1 
Query:    1 TAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNHQQADTGTKMIHLGRNTTSRIVAKGISAGASQSTYRGLVSIHPKAEGARNHTQCDSLLIGDKCGAHTVPYIEVRNPAAQVEHEATTSKLSEEQLFYCRQRGLDAESAVALLVNGFCREVLQHLPMEFAVEAQKLVGVSLEGSVG 726
            TAPMRDENQLHAAVVELV LDDAEIKYSTVQNWYPGDK GRGGIYNFVTKRGACRG+ SKISWTQVETGSAITWKYPSCILQGDNSVGEFYS+A+TNN QQADTGTKMIH+GRNT S IV+KGISAG  Q+TYRGLV +   AEGARNHTQCDSLLIGD CGAHTVPYIEV+NP AQVEHEATTSK+S++QLFYCRQRGL AE AVAL+VNGFC++V+ HLPMEFAVEAQKL+GVSLEGSVG
Sbjct:  242 TAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKQGRGGIYNFVTKRGACRGKRSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSVAVTNNFQQADTGTKMIHIGRNTRSTIVSKGISAGRGQNTYRGLVRMLSGAEGARNHTQCDSLLIGDACGAHTVPYIEVKNPTAQVEHEATTSKISDDQLFYCRQRGLSAEEAVALIVNGFCKDVMLHLPMEFAVEAQKLLGVSLEGSVG 483
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BLAST of mRNA_P-wetherbeei_contig6922.3.1 vs. uniprot
Match: A0A2E7QHG9_9PROT (Fe-S cluster assembly protein SufB n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QHG9_9PROT)

HSP 1 Score: 433 bits (1113), Expect = 5.890e-149
Identity = 208/242 (85.95%), Postives = 229/242 (94.63%), Query Frame = 1 
Query:    1 TAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNHQQADTGTKMIHLGRNTTSRIVAKGISAGASQSTYRGLVSIHPKAEGARNHTQCDSLLIGDKCGAHTVPYIEVRNPAAQVEHEATTSKLSEEQLFYCRQRGLDAESAVALLVNGFCREVLQHLPMEFAVEAQKLVGVSLEGSVG 726
            TAPMRDENQLHAAVVELV LDDAEIKYSTVQNWYPGD++G GGIYNFVTKR ACRGRNSK+SWTQVETGSAITWKYPSCILQGDNSVGEFYS+AITNN+QQADTGTKMIHLG+NT+SRIVAKGISAG SQSTYRGLV + PKAEG+RN+TQCDSLLIG +CGAHTVPYIE RN +A+VEHEATTSK++++QLFYCRQRG+  E AVAL+VNGFCREV+Q LPMEFAVEAQKLVG+SLEGSVG
Sbjct:  245 TAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGVGGIYNFVTKRAACRGRNSKVSWTQVETGSAITWKYPSCILQGDNSVGEFYSVAITNNYQQADTGTKMIHLGKNTSSRIVAKGISAGKSQSTYRGLVKMMPKAEGSRNYTQCDSLLIGSECGAHTVPYIESRNKSAKVEHEATTSKIADDQLFYCRQRGMSEEEAVALIVNGFCREVMQELPMEFAVEAQKLVGISLEGSVG 486
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BLAST of mRNA_P-wetherbeei_contig6922.3.1 vs. uniprot
Match: A0A6A7KMX0_9PROT (Fe-S cluster assembly protein SufB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KMX0_9PROT)

HSP 1 Score: 432 bits (1112), Expect = 7.820e-149
Identity = 209/242 (86.36%), Postives = 225/242 (92.98%), Query Frame = 1 
Query:    1 TAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNHQQADTGTKMIHLGRNTTSRIVAKGISAGASQSTYRGLVSIHPKAEGARNHTQCDSLLIGDKCGAHTVPYIEVRNPAAQVEHEATTSKLSEEQLFYCRQRGLDAESAVALLVNGFCREVLQHLPMEFAVEAQKLVGVSLEGSVG 726
            TAPMRDENQLHAAVVEL+ LDDAEIKYSTVQNWYPGD++G+GGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCIL+GDNSVGEFYS+AITNN QQADTGTKMIHLG+NT S I+AKGI+AG S STYRG V I PKAEGARN+TQCDSLLIG  CGAHTVPYIE RNP+A+VEHEATTSK+ E+QLFYCRQRGL  E AVAL+VNGFCREVLQ LPMEFAVEAQKLVG+SLEGSVG
Sbjct:  243 TAPMRDENQLHAAVVELIALDDAEIKYSTVQNWYPGDEEGKGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILEGDNSVGEFYSVAITNNRQQADTGTKMIHLGKNTRSTIIAKGIAAGRSDSTYRGQVKILPKAEGARNYTQCDSLLIGGDCGAHTVPYIESRNPSARVEHEATTSKIGEDQLFYCRQRGLSDEEAVALIVNGFCREVLQQLPMEFAVEAQKLVGISLEGSVG 484
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BLAST of mRNA_P-wetherbeei_contig6922.3.1 vs. uniprot
Match: A0A1Y5T7C9_9PROT (FeS cluster assembly protein SufB n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5T7C9_9PROT)

HSP 1 Score: 432 bits (1111), Expect = 1.270e-148
Identity = 210/242 (86.78%), Postives = 227/242 (93.80%), Query Frame = 1 
Query:    1 TAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNHQQADTGTKMIHLGRNTTSRIVAKGISAGASQSTYRGLVSIHPKAEGARNHTQCDSLLIGDKCGAHTVPYIEVRNPAAQVEHEATTSKLSEEQLFYCRQRGLDAESAVALLVNGFCREVLQHLPMEFAVEAQKLVGVSLEGSVG 726
            TAPMRDENQLHAAVVELV LDDAEIKYSTVQNWYPGD DG GGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNN QQADTGTKMIHLGRNT SRI++KGISAG +Q+TYRGLV + PKAE ARNHT CDSLLIGD+CGAHTVPYIE +N +A+VEHEATTSK+SE+QLFYCRQRG+D E A++L+VNGFC+EVLQ LPMEFAVEAQKLVG+SLEGSVG
Sbjct:  247 TAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDADGVGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNMQQADTGTKMIHLGRNTRSRIISKGISAGRAQNTYRGLVRMGPKAEKARNHTVCDSLLIGDRCGAHTVPYIESQNASARVEHEATTSKVSEDQLFYCRQRGIDEEDALSLIVNGFCKEVLQQLPMEFAVEAQKLVGISLEGSVG 488
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6922.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A352KFE0_9PROT1.600e-16393.80Fe-S cluster assembly protein SufB (Fragment) n=10... [more]
A0A545TPB1_9PROT8.330e-15188.02Fe-S cluster assembly protein SufB n=1 Tax=Denitro... [more]
A0A839STJ0_9HYPH1.730e-15087.60Fe-S cluster assembly protein SufB n=1 Tax=Limibac... [more]
A0A239PSI8_9PROT4.540e-15088.43Iron-regulated ABC transporter membrane component ... [more]
A0A3M0XYS4_9PROT6.780e-15086.78Fe-S cluster assembly protein SufB n=1 Tax=Alphapr... [more]
A0A2D6G3Q7_9PROT1.510e-14986.78Fe-S cluster assembly protein SufB n=3 Tax=unclass... [more]
A0A3A0F221_9PROT3.760e-14986.36Fe-S cluster assembly protein SufB n=1 Tax=Proteob... [more]
A0A2E7QHG9_9PROT5.890e-14985.95Fe-S cluster assembly protein SufB n=1 Tax=Rhodosp... [more]
A0A6A7KMX0_9PROT7.820e-14986.36Fe-S cluster assembly protein SufB n=1 Tax=Alphapr... [more]
A0A1Y5T7C9_9PROT1.270e-14886.78FeS cluster assembly protein SufB n=1 Tax=Oceaniba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6922contigP-wetherbeei_contig6922:2531..3259 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1002672.SAR11G3_01328
Preferred namesufB
PFAMsUPF0051
Model size729
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K09014
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009536,GO:0009842,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
Exons1
Evalue5.56e-145
EggNOG OGsCOG0719@1|root,COG0719@2|Bacteria,1MVKY@1224|Proteobacteria,2TRU6@28211|Alphaproteobacteria,4BPG7@82117|unclassified Alphaproteobacteria
DescriptionFeS assembly protein SufB
Cds size720
COG categoryO
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186946.2214751-CDS-P-wetherbeei_contig6922:2530..32501683186946.2214751-CDS-P-wetherbeei_contig6922:2530..3250Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6922 2531..3250 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186946.2351856-UTR-P-wetherbeei_contig6922:3250..32591683186946.2351856-UTR-P-wetherbeei_contig6922:3250..3259Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6922 3251..3259 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6922.3.1prot_P-wetherbeei_contig6922.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6922 2531..3250 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6922.3.1

>prot_P-wetherbeei_contig6922.3.1 ID=prot_P-wetherbeei_contig6922.3.1|Name=mRNA_P-wetherbeei_contig6922.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=240bp
MRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGRGGIYNFVTKRGA
CRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSIAITNNHQQAD
TGTKMIHLGRNTTSRIVAKGISAGASQSTYRGLVSIHPKAEGARNHTQCD
SLLIGDKCGAHTVPYIEVRNPAAQVEHEATTSKLSEEQLFYCRQRGLDAE
SAVALLVNGFCREVLQHLPMEFAVEAQKLVGVSLEGSVG*
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mRNA from alignment at P-wetherbeei_contig6922:2531..3259-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6922.3.1 ID=mRNA_P-wetherbeei_contig6922.3.1|Name=mRNA_P-wetherbeei_contig6922.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig6922:2531..3259- (Phaeothamnion wetherbeei SAG_119_79)
ACCGCGCCCATGCGCGATGAAAACCAGTTACATGCCGCCGTGGTGGAGCT
TGTAGTGCTGGACGATGCCGAGATCAAATATTCAACCGTGCAGAACTGGT
ATCCCGGCGACAAGGATGGGCGCGGCGGAATCTATAATTTTGTCACCAAG
CGTGGCGCATGCCGGGGCCGTAACTCGAAAATTTCCTGGACACAGGTGGA
AACCGGATCGGCCATTACCTGGAAATATCCAAGCTGTATCCTGCAGGGTG
ATAATTCGGTAGGTGAATTTTACTCCATCGCCATTACCAATAATCATCAG
CAGGCGGATACCGGCACCAAGATGATCCATCTGGGACGCAACACCACCAG
CCGCATCGTGGCCAAGGGCATTTCAGCGGGCGCCAGCCAGTCCACCTATC
GCGGATTGGTCAGCATACATCCCAAAGCCGAGGGCGCGCGCAACCACACC
CAATGCGATTCCCTGTTGATTGGCGATAAATGCGGCGCGCATACCGTGCC
CTATATTGAGGTGCGCAATCCGGCGGCGCAGGTGGAACACGAGGCGACCA
CGTCCAAGCTGAGCGAGGAGCAATTATTCTATTGCCGCCAGCGCGGCCTG
GATGCGGAAAGCGCGGTGGCGCTGCTGGTCAATGGTTTTTGCCGTGAAGT
GTTACAGCATCTGCCGATGGAATTTGCCGTCGAAGCGCAAAAGCTGGTCG
GTGTGAGTTTAGAAGGCAGTGTCGGGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6922:2531..3259-

>mRNA_P-wetherbeei_contig6922.3.1 ID=mRNA_P-wetherbeei_contig6922.3.1|Name=mRNA_P-wetherbeei_contig6922.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig6922:2531..3259- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCGATGAAAACCAGTTACATGCCGCCGTGGTGGAGCTTGTAGTGCT
GGACGATGCCGAGATCAAATATTCAACCGTGCAGAACTGGTATCCCGGCG
ACAAGGATGGGCGCGGCGGAATCTATAATTTTGTCACCAAGCGTGGCGCA
TGCCGGGGCCGTAACTCGAAAATTTCCTGGACACAGGTGGAAACCGGATC
GGCCATTACCTGGAAATATCCAAGCTGTATCCTGCAGGGTGATAATTCGG
TAGGTGAATTTTACTCCATCGCCATTACCAATAATCATCAGCAGGCGGAT
ACCGGCACCAAGATGATCCATCTGGGACGCAACACCACCAGCCGCATCGT
GGCCAAGGGCATTTCAGCGGGCGCCAGCCAGTCCACCTATCGCGGATTGG
TCAGCATACATCCCAAAGCCGAGGGCGCGCGCAACCACACCCAATGCGAT
TCCCTGTTGATTGGCGATAAATGCGGCGCGCATACCGTGCCCTATATTGA
GGTGCGCAATCCGGCGGCGCAGGTGGAACACGAGGCGACCACGTCCAAGC
TGAGCGAGGAGCAATTATTCTATTGCCGCCAGCGCGGCCTGGATGCGGAA
AGCGCGGTGGCGCTGCTGGTCAATGGTTTTTGCCGTGAAGTGTTACAGCA
TCTGCCGATGGAATTTGCCGTCGAAGCGCAAAAGCTGGTCGGTGTGAGTT
TAGAAGGCAGTGTCGGGTAA
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