mRNA_P-wetherbeei_contig6909.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6909.1.1 vs. uniprot
Match: A0A835YVF2_9STRA (DUF667 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF2_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.340e-31 Identity = 59/153 (38.56%), Postives = 88/153 (57.52%), Query Frame = 1
Query: 1 DCEGRPGAGSACVVDDTLTGAQCVELMGEAA-LRLPCSSVLPFLCLHLDAMGEFVSFEVTVVDDAERFRRIDVSNRRSQVVLDGDLLQLPLKCDGPGWERLNLDLDRIVRLAFGTQYLTTCLVRVGATCRLARVFFQEQPYADVALPPHLRVM 456
+CE G DD G Q +E++GE+A + PC V P LC HL + F S +V ++DD + R +++SN RS +DG LP++ GW L +DL+ + R AFGT TC V V +CR+A++FF+++ YAD LP HL+ +
Sbjct: 47 ECELLGGDNEISAYDDEELGVQMLEILGESARVAFPCYCVRPILCAHLKMIDRFCSIDVDLLDDTGQHRSMNLSNHRSVATIDGAYADLPMQLTS-GWNHLAIDLNLVTRTAFGTGLSATCQVAVNGSCRVAKLFFEQEAYADAQLPGHLQAL 198
BLAST of mRNA_P-wetherbeei_contig6909.1.1 vs. uniprot
Match: D7FPJ6_ECTSI (DUF667 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ6_ECTSI) HSP 1 Score: 115 bits (287), Expect = 3.560e-28 Identity = 60/121 (49.59%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 94 LRLPCSSVLPFLCLHLDAMGEFVSFEVTVVDDAERFRRIDVSNRRSQVVLDGDLLQLPLKCDGPGWERLNLDLDRIVRLAFGTQYLTTCLVRVGATCRLARVFFQEQPYADVALPPHLRVM 456
+RLP + P LD +F SFEV +VDD +R+R ID+SN RS + D LPLK + GW+R+N+DL+R VRL FG+ YLTT V V A+ R+A++FFQ QP++D LP HLRV+
Sbjct: 192 MRLPKPRLRPDFLQTLD---KFFSFEVEIVDDTKRYRYIDISNTRSVADIGDDRALLPLKLED-GWQRVNIDLERTVRLVFGSSYLTTSQVTVRASARVAKLFFQSQPFSDYELPSHLRVV 308
BLAST of mRNA_P-wetherbeei_contig6909.1.1 vs. uniprot
Match: D0MZT1_PHYIT (DUF667 domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0MZT1_PHYIT) HSP 1 Score: 112 bits (281), Expect = 4.850e-28 Identity = 59/151 (39.07%), Postives = 87/151 (57.62%), Query Frame = 1
Query: 1 DCEGRPGAGSACVVDDTLTGAQCVELMG-EAALRLPCSSVLPFLCLHLDAMGEFVSFEVTVVDDAERFRRIDVSNRRSQVVLDGDLLQLPLKCDG-PGWERLNLDLDRIVRLAFGTQYLTTCLVRVGATCRLARVFFQEQPYADVALPPHL 447
+C CV++D V+++G +A L P ++ +L L ++ M F+ F V V+DDA+++RR V+N RS ++ QLPL PGW L +DL + AFGT+++TT VRVG CRL R+FFQ++ YAD LP HL
Sbjct: 75 ECRVLMSGNDVCVLEDETVKEDVVQILGNDAELVFPVRNIFRYLVLFVENMDLFLDFHVEVLDDAQKYRRFTVTNTRSLARVEDSRCQLPLAFGPQPGWRYLCMDLQDLTSQAFGTRHVTTTKVRVGGHCRLLRMFFQDERYADADLPAHL 225
BLAST of mRNA_P-wetherbeei_contig6909.1.1 vs. uniprot
Match: A0A6A3P343_9STRA (DUF667 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P343_9STRA) HSP 1 Score: 110 bits (276), Expect = 6.550e-28 Identity = 56/151 (37.09%), Postives = 85/151 (56.29%), Query Frame = 1
Query: 1 DCEGRPGAGSACVVDDTLTGAQCVELMG-EAALRLPCSSVLPFLCLHLDAMGEFVSFEVTVVDDAERFRRIDVSNRRSQVVLDGDLLQLPLKCDG-PGWERLNLDLDRIVRLAFGTQYLTTCLVRVGATCRLARVFFQEQPYADVALPPHL 447
+C CV++D + V+++G +A L P ++ +L + + M F+ F V +DD +++R+ V+N RS ++ QLPL PGW L +DL I AFGT+++TT VRVG CRL R+FFQ++ YAD LP HL
Sbjct: 18 ECRCLMNGNDVCVLEDEIVKEDVVQVLGSDAELVFPTRNIFRYLVMFIKNMDLFLEFHVEALDDTQKYRQFTVTNTRSLARVEDSACQLPLAFGSHPGWRYLCMDLQDITNQAFGTRHVTTTEVRVGGNCRLLRIFFQDERYADADLPAHL 168
BLAST of mRNA_P-wetherbeei_contig6909.1.1 vs. uniprot
Match: A0A329SK27_9STRA (DUF667 domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SK27_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.050e-27 Identity = 57/151 (37.75%), Postives = 86/151 (56.95%), Query Frame = 1
Query: 1 DCEGRPGAGSACVVDDTLTGAQCVELMG-EAALRLPCSSVLPFLCLHLDAMGEFVSFEVTVVDDAERFRRIDVSNRRSQVVLDGDLLQLPLKCDG-PGWERLNLDLDRIVRLAFGTQYLTTCLVRVGATCRLARVFFQEQPYADVALPPHL 447
+C CV++D V+++G +A L P ++ +L + + M F+ F V V+DDA+++R+ V+N RS ++ QLPL PGW L +DL + AFGT+++TT VRVG CRL R+FFQ++ YAD LP HL
Sbjct: 36 ECRILMSGNDVCVLEDETVKEDVVQVLGNDAELVFPVRNIFRYLVMFVKNMDLFLEFHVEVLDDAQKYRQFTVTNTRSLARVEDSRCQLPLAFGAHPGWRYLCMDLQDLTSQAFGTRHVTTTKVRVGGNCRLLRMFFQDERYADADLPAHL 186
BLAST of mRNA_P-wetherbeei_contig6909.1.1 vs. uniprot
Match: G4YH75_PHYSP (DUF667 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YH75_PHYSP) HSP 1 Score: 105 bits (263), Expect = 2.740e-25 Identity = 54/151 (35.76%), Postives = 85/151 (56.29%), Query Frame = 1
Query: 1 DCEGRPGAGSACVVDDTLTGAQCVELMG-EAALRLPCSSVLPFLCLHLDAMGEFVSFEVTVVDDAERFRRIDVSNRRSQVVLDGDLLQLPLKCDG-PGWERLNLDLDRIVRLAFGTQYLTTCLVRVGATCRLARVFFQEQPYADVALPPHL 447
+C CV++D + V+++G +A L P ++ +L + + M F+ F+V V+DD++ +R V+N RS ++ QLPL PGW L +DL + AFGT+++TT VR+ CRL R+FFQ++ YAD LP HL
Sbjct: 81 ECRCLMNGNDVCVLEDEIVKEDVVQVLGNDAELVFPTRNIFRYLVMFIKNMDLFLEFQVEVLDDSQNYRVFTVTNTRSLARVEDTACQLPLAFGSHPGWRYLCMDLQDLTNQAFGTRHVTTTEVRIRGNCRLLRMFFQDERYADADLPAHL 231
BLAST of mRNA_P-wetherbeei_contig6909.1.1 vs. uniprot
Match: H3GJA4_PHYRM (DUF667 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJA4_PHYRM) HSP 1 Score: 110 bits (274), Expect = 4.690e-25 Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = 1
Query: 1 DCEGRPGAGSACVVDDTLTGAQCVELMG-EAALRLPCSSVLPFLCLHLDAMGEFVSFEVTVVDDAERFRRIDVSNRRSQVVLDGDLLQLPLKCD-GPGWERLNLDLDRIVRLAFGTQYLTTCLVRVGATCRLARVFFQEQPYADVALPPHL 447
+C + CV++D V+++G +A L P ++ +L + + M F+ F+V V+DDA+++R++ V+N RS ++ QLPL PGW L +DL + + AFGT+++TT VR+ CRL R+FFQ++ YAD LP HL
Sbjct: 628 ECRCLMNGNNVCVLEDETVKEDVVQVLGTDAELVFPVRNIFRYLVMFIKNMDLFLEFQVEVLDDAQKYRQLTVTNTRSLARVEDSRCQLPLAFGMQPGWRYLCMDLQDVTQQAFGTRHVTTTEVRIAGNCRLLRMFFQDERYADADLPAHL 778
BLAST of mRNA_P-wetherbeei_contig6909.1.1 vs. uniprot
Match: A0A662XQD2_9STRA (DUF667 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQD2_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.330e-25 Identity = 56/139 (40.29%), Postives = 83/139 (59.71%), Query Frame = 1
Query: 37 VVDDTLTGAQCVELMG-EAALRLPCSSVLPFLCLHLDAMGEFVSFEVTVVDDAERFRRIDVSNRRSQVVLDGDLLQLPLKCDG-PGWERLNLDLDRIVRLAFGTQYLTTCLVRVGATCRLARVFFQEQPYADVALPPHL 447
V++D V+++G +A L P S+ +L L + + F+ F V V+DD++ +R+ V+N RS +D QLPL PGW L +DL + R AFGT+++TT VRVG CRL R+FFQ++ YAD LP +L
Sbjct: 117 VLEDETVQEGVVQVLGTDAELVFPVRSIFRYLVLFVKNLELFLEFHVQVLDDSQTYRQFTVTNARSLARVDLSTCQLPLSFGSQPGWRYLCMDLQELTRQAFGTRHVTTTEVRVGGNCRLLRLFFQDERYADADLPAYL 255
BLAST of mRNA_P-wetherbeei_contig6909.1.1 vs. uniprot
Match: A0A485LGF8_9STRA (Aste57867_21039 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGF8_9STRA) HSP 1 Score: 106 bits (265), Expect = 8.530e-25 Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 1
Query: 37 VVDDTLTGAQCVELMG-EAALRLPCSSVLPFLCLHLDAMGEFVSFEVTVVDDAERFRRIDVSNRRSQVVLDGDLLQLPLKCD--GPGWERLNLDLDRIVRLAFGTQYLTTCLVRVGATCRLARVFFQEQPYADVALPPHLRVMQ 459
VVDD VE+ G +A L L C SV+ +L L M F +FEV ++DD + +R ++N RS + G+ Q+PL G GW + LD+ R+ AFGTQ++ T VR+ ATCRL R +FQE Y+D LP +L +++
Sbjct: 188 VVDDVEAQQPAVEIRGSDARLVLQCHSVMRYLVLFAKNMDAFFAFEVEMLDDKKIYREFHITNARSLARVTGNACQMPLAFGRGGSGWRYICLDVQRMCLEAFGTQHVATVQVRIHATCRLLRAYFQEIEYSDAELPSYLALLE 331
BLAST of mRNA_P-wetherbeei_contig6909.1.1 vs. uniprot
Match: A0A0N7L3W7_PLAHL (Transcription factor IIB n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L3W7_PLAHL) HSP 1 Score: 109 bits (272), Expect = 8.600e-25 Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 1
Query: 1 DCEGRPGAGSACVVDDTLTGAQCVELMG-EAALRLPCSSVLPFLCLHLDAMGEFVSFEVTVVDDAERFRRIDVSNRRSQVVLDGDLLQLPLKCDG-PGWERLNLDLDRIVRLAFGTQYLTTCLVRVGATCRLARVFFQEQPYADVALPPHL 447
+C CV++D V+++G + L P S+ +L + + M F F+V ++DDA ++R V+N RS ++G QLPL P W L +DL + AFGTQ++TT VRVG CRL R+FFQ++ YAD LP HL
Sbjct: 580 ECRSLMTGNDVCVLEDETVKEDVVQVLGNDVELVFPVSNSFRYLVMFIKNMDLFFEFQVEILDDAHKYRSFTVTNTRSLARIEGLRCQLPLAFGTHPSWRYLCMDLQDLTNQAFGTQHVTTTKVRVGGNCRLLRIFFQDERYADAELPAHL 730 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6909.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6909.1.1 >prot_P-wetherbeei_contig6909.1.1 ID=prot_P-wetherbeei_contig6909.1.1|Name=mRNA_P-wetherbeei_contig6909.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp DCEGRPGAGSACVVDDTLTGAQCVELMGEAALRLPCSSVLPFLCLHLDAMback to top mRNA from alignment at P-wetherbeei_contig6909:624..1650+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6909.1.1 ID=mRNA_P-wetherbeei_contig6909.1.1|Name=mRNA_P-wetherbeei_contig6909.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1027bp|location=Sequence derived from alignment at P-wetherbeei_contig6909:624..1650+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6909:624..1650+ >mRNA_P-wetherbeei_contig6909.1.1 ID=mRNA_P-wetherbeei_contig6909.1.1|Name=mRNA_P-wetherbeei_contig6909.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig6909:624..1650+ (Phaeothamnion wetherbeei SAG_119_79)back to top |