mRNA_P-wetherbeei_contig6901.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6901.1.1
Unique NamemRNA_P-wetherbeei_contig6901.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A835ZDF2_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF2_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.340e-36
Identity = 82/147 (55.78%), Postives = 97/147 (65.99%), Query Frame = 1
Query:  556 VGTAAATTRLGDDVFFG-CPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMDCSYRISEVELASSLWSRWLRRLLGMKVGDAA 993
            V TA+A   L DD FFG  PLPP L G R A LD EGR+VATDH  FVL NVY+PC+S   EDA+ +E        RRHFK DF AAL  R RQL+ AGR VVL GDLNACA+  D  + +SE +  +S WSRW+RR+LG  +  AA
Sbjct:   86 VATASAAAGLADDAFFGGAPLPPPLRGERAAALDREGRVVATDHVDFVLFNVYAPCVS--GEDAARAEE-------RRHFKRDFNAALEARARQLVRAGRHVVLAGDLNACASPRDHCFAMSEADFLASPWSRWIRRMLGRSLESAA 223          
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: D7FKG3_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG3_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 4.910e-28
Identity = 67/142 (47.18%), Postives = 91/142 (64.08%), Query Frame = 1
Query:  562 TAAATTRLGDDVFFGCPLPPV----LDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMDCSYRISEVELASSLWSRWLRRLLGM 975
            T A+TT LGD  FFG P   V    L   R+A LD+EGR++ TDHG FVL NVY+PC+S  S+D      E+++   RR FK DF A L  R  ++   GR VVLVGDLNACA+ +D  + +++ E  +S WS+W+R +LG+
Sbjct:  109 TLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGHFVLFNVYAPCVSSSSDD------EKEKTEDRRAFKRDFLATLEARIFEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGL 244          
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A7R9VGR4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VGR4_9CHLO)

HSP 1 Score: 113 bits (282), Expect = 8.030e-24
Identity = 94/302 (31.13%), Postives = 130/302 (43.05%), Query Frame = 1
Query:  103 RIVTWNVNGLRSVSAEGGGLPSLLASLDAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRHYSGVLTAVRRHDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMD-CSYRISEVE-LASSLWSR-WLRRLLGMKVGDAAGG 999
            R++T+NVNGLR+++A  GG+  LL +L A+I+CFQE K+ R  L    A+ PG+  +F F R  N R YSGV T VRR +    P  A     G                                           S P   + +A        AA                      +  +DAEGR V TDHG+FVL NVY PC+   +      +   Q+ +    +K  +  AL +R R+ + AGR V+LVGDLN C   +D C    + +E      W R WLR L+     +A GG
Sbjct:   78 RVLTFNVNGLRTMAAGIGGIEKLLGALGADIVCFQEHKMRREDLDTTTAIVPGWESFFAFNRASN-RGYSGVATYVRR-ETAGVPVHAEEGLTGFLALDR-------------------------------------SLPKSRAPQALGPPWNNYAADA--------------------LESIDAEGRCVVTDHGAFVLFNVYGPCVGPVNPGDGAGDRSTQRTQ----YKRMYFEALDVRLRRSLAAGRRVLLVGDLNVCLDPIDSCDPGAASLEAFVKDRWDRRWLRGLV-----EAGGG 311          
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A1Y1IBM6_KLENI (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBM6_KLENI)

HSP 1 Score: 112 bits (279), Expect = 2.080e-23
Identity = 92/297 (30.98%), Postives = 130/297 (43.77%), Query Frame = 1
Query:  103 RIVTWNVNGLRSVSAEGGGLPSLLASLDAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRH-YSGVLTAVRRHDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLG--DDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMDCSYRISEVELASSLWSRWLRRLLGMKVG 984
            +IV++NVNGLR  + E GGL  LL +LDA+IIC QETK+ R+ L  ++A++ GY  +F F R ++ R  +SGV T  R                GGT  T+                                    P+   +     +    G A A   +G  + V+ G          R+ ELD EGR V TDHG+FVL N+Y PC+    ++             R  FK DF   L  R   L+ AGR +V+VGDLN     +D  +   +V  + S    WL+ +L    G
Sbjct:    2 KIVSFNVNGLRPRAKEFGGLKQLLDALDADIICLQETKLARTDLSADVAVADGYESFFAFPRGKHARGGWSGVATFCRT--------------GGGTSGTSAVL---------------------------------PTAAEEGFTGVQHLRAGGALAEGVVGQYEAVWAG----ETGSRARLEELDQEGRTVVTDHGAFVLFNIYGPCVQPGDDE-------------RIAFKLDFYRTLQRRWESLLAAGRRLVVVGDLNIAPAAVDSVHAGPDVNASPS--RVWLQSMLRANGG 232          
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A150GNH8_GONPE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GNH8_GONPE)

HSP 1 Score: 106 bits (265), Expect = 4.270e-22
Identity = 85/259 (32.82%), Postives = 112/259 (43.24%), Query Frame = 1
Query:  103 RIVTWNVNGLRSVSAEGGGLPSLLASLDAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRHYSGVLTAVRRHDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLN 879
            R+VTWNVNGLR +    GGL  LL SL A+++CFQETK+ R  L  +LAL+ G+  +F F R   K  YSGV T  RR  +V  P+ A     G T A A                                     S  A ++   R  A G                     L G  + +LD EGR+V TD G+ V++NVY P ++ +   A            R  +K  F  AL +R   L+  GR VV+ GDLN
Sbjct:    4 RLVTWNVNGLRRIVTAFGGLGPLLESLHADVVCFQETKLTRGMLERDLALADGWESFFAFTR--GKVGYSGVATFCRR--DVAVPRHAEE---GFTGALALPPGVRPD-----------------------------SAAAAAALHPRWAAAG---------------------LGGEELLQLDGEGRVVVTDLGAVVVVNVYGPAITSEERAAE-----------RMGYKMRFYQALQLRLDDLLAGGRRVVMCGDLN 194          
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A8J4B9H4_9CHLO (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B9H4_9CHLO)

HSP 1 Score: 107 bits (268), Expect = 6.060e-22
Identity = 95/306 (31.05%), Postives = 126/306 (41.18%), Query Frame = 1
Query:  103 RIVTWNVNGLRSVSAEGGGLPSLLASL-DAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRHYSGVLTAVRRHDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPR----------VAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMD-CSYRISEVELASSLWSRWLRRLLGMKVG 984
            R++TWN+NGLR V A  GGL  LL +L  A++ICFQETK+ R+ L  ELAL+ G+  YF F R   +  Y+GV T  RR  ++                                                               RA     G        G     G     VL  PR          + +LD EGR+V TDHG+FVL NVY P ++ +         ER + R+   +K  F  AL +R    +  GR V+LVGDLN     MD C     + +L  +  + WLR LL   VG
Sbjct:    4 RVLTWNINGLRRVVAAFGGLQRLLDALAPADVICFQETKLTRADLRRELALADGWDSYFAFTR--GRVGYAGVATFCRRDRSLP-------------------------------------------------------------HRAEEGFTGVLELPPGSGSRTVAGVTSSAVLH-PRWEAGGWHVDQLRKLDGEGRVVITDHGAFVLFNVYGPAITSE---------ERAEERM--PYKLQFYEALQLRLDSFLAEGRRVLLVGDLNIAPGPMDVCGATTRDFDLQRADRA-WLRGLLSRGVG 233          
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: UPI001BF83215 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF83215)

HSP 1 Score: 105 bits (262), Expect = 1.650e-21
Identity = 91/296 (30.74%), Postives = 125/296 (42.23%), Query Frame = 1
Query:  103 RIVTWNVNGLRSVSAEGGGLPSLLASLDAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRH--YSGVLTAVRRHDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMDCSYRISEVELASSLWSRWLRRLLGMKVG 984
            +IVT+NVNGLRS  ++ G LP LL S DA+IICFQETK+ R  L  +LA++ GY  +F+  R  ++    YSGV T  R        + A   AA                                          +  T    +   R C      A   + DD      L        + ++D+EGR + TDHG FVL N+Y P        A  ++ ER Q      FK  F   L  R   L+  GR +++VGDLN   T MDC     + E  ++ + RW R +L    G
Sbjct:    2 KIVTYNVNGLRSRISQFGSLPKLLDSFDADIICFQETKLRRQELTADLAVADGYESFFSCTRTSDRGRMGYSGVATFCRVKSAFSSTEVALPIAA-----------------------------------------QEGFTGLVENSHNRKCE-----ARNEIVDD------LEDEFAKEELLKVDSEGRCIITDHGHFVLFNLYGP-------RAECNDDERIQ------FKLTFFKILQKRWESLLRQGRRIIVVGDLNIAPTAMDCCDAGPDFE--TNEFRRWFRSILAESGG 230          
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A8J4M027_9CHLO (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4M027_9CHLO)

HSP 1 Score: 105 bits (261), Expect = 2.100e-21
Identity = 94/305 (30.82%), Postives = 126/305 (41.31%), Query Frame = 1
Query:  103 RIVTWNVNGLRSVSAEGGGLPSLLASL-DAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRHYSGVLTAVRR-----HDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMD-CSYRISEVELASSLWSRWLRRLLGMKVGDAAG 996
            R++TWN+NGLR V A  GGL  LL +L  A+++CFQETK+ R  L  ELAL+ G+  +F F R   +  YSGV T  RR     H   +G         GG+  T                                    + S    S   A    V                          ++  LD EGR+V TDHG+FVL NVY P ++ +         ER + R+   +K  F  AL +R    +  GR VVLVGDLN     +D C     + +   +  + WLR LL   VG   G
Sbjct:    4 RVLTWNINGLRRVVAAFGGLQRLLDALAPADVVCFQETKLTRGDLRRELALADGWESFFAFTR--GRVGYSGVATFCRRDRSLPHHAEEGFTRVLEMPPGGSCRTITGD--------------------------------ESSAVLHSRWEAGGWQVD-------------------------QLRNLDGEGRVVITDHGAFVLFNVYGPAITSE---------ERAEERM--PYKLQFYKALQLRLDSFLAEGRRVVLVGDLNIAPDVVDVCGATPRDFDCRRADRA-WLRGLLSRGVGGGCG 237          
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A2I4FDC0_JUGRE (DNA-(apurinic or apyrimidinic site) endonuclease n=21 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4FDC0_JUGRE)

HSP 1 Score: 105 bits (262), Expect = 2.900e-21
Identity = 90/291 (30.93%), Postives = 124/291 (42.61%), Query Frame = 1
Query:  103 RIVTWNVNGLRSVSAEGGGLPSLLASLDAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRH--YSGVLTAVRRHDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMDCSYRISEVELASSLWSRWLRRLL 969
            +IVT+NVNGLRS  ++ G LP LL S DA+IICFQETK+ R  L  +LA++ GY  +F+  R  ++    YSGV T  R        + A   AA                                          +  T    + + R C      A   + DD      L        + ++D+EGR + TDHG FVL N+Y P        A  ++ ER Q      FK  F   L  R   L+  GR +++VGDLN   T MDC     + E+    + RW R +L
Sbjct:    2 KIVTYNVNGLRSRISQFGSLPKLLDSFDADIICFQETKLRRQELTADLAVAGGYESFFSCTRTSDRGRMGYSGVATFCRVKSAFSSTEVALPIAA-----------------------------------------QEGFTGLVENSQNRKCE-----ARNEIVDD------LEDEFAKEELLKVDSEGRCIITDHGHFVLFNLYGP-------RAECNDEERIQ------FKLTFFKILQKRWESLLRRGRRIIVVGDLNIAPTAMDCCDAGPDFEMNE--FRRWFRSIL 225          
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A8J4LZJ4_9CHLO (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LZJ4_9CHLO)

HSP 1 Score: 105 bits (261), Expect = 4.820e-21
Identity = 94/305 (30.82%), Postives = 126/305 (41.31%), Query Frame = 1
Query:  103 RIVTWNVNGLRSVSAEGGGLPSLLASL-DAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRHYSGVLTAVRR-----HDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMD-CSYRISEVELASSLWSRWLRRLLGMKVGDAAG 996
            R++TWN+NGLR V A  GGL  LL +L  A+++CFQETK+ R  L  ELAL+ G+  +F F R   +  YSGV T  RR     H   +G         GG+  T                                    + S    S   A    V                          ++  LD EGR+V TDHG+FVL NVY P ++ +         ER + R+   +K  F  AL +R    +  GR VVLVGDLN     +D C     + +   +  + WLR LL   VG   G
Sbjct:    4 RVLTWNINGLRRVVAAFGGLQRLLDALAPADVVCFQETKLTRGDLRRELALADGWESFFAFTR--GRVGYSGVATFCRRDRSLPHHAEEGFTRVLEMPPGGSCRTITGD--------------------------------ESSAVLHSRWEAGGWQVD-------------------------QLRNLDGEGRVVITDHGAFVLFNVYGPAITSE---------ERAEERM--PYKLQFYKALQLRLDSFLAEGRRVVLVGDLNIAPDVVDVCGATPRDFDCRRADRA-WLRGLLSRGVGGGCG 237          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDF2_9STRA2.340e-3655.78DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
D7FKG3_ECTSI4.910e-2847.18DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A7R9VGR4_9CHLO8.030e-2431.13Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A1Y1IBM6_KLENI2.080e-2330.98DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
A0A150GNH8_GONPE4.270e-2232.82Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A8J4B9H4_9CHLO6.060e-2231.05DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
UPI001BF832151.650e-2130.74Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
A0A8J4M027_9CHLO2.100e-2130.82Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A2I4FDC0_JUGRE2.900e-2130.93DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A8J4LZJ4_9CHLO4.820e-2130.82DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6901contigP-wetherbeei_contig6901:125..1471 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FKG3
Preferred nameAPEX2
PFAMsExo_endo_phos,zf-GRF
Model size1056
Max annot lvl2759|Eukaryota
KEGG koko:K02836,ko:K10772
KEGG Pathwayko03410,map03410
KEGG ModuleM00296
Hectar predicted targeting categorysignal peptide
GOsGO:0000302,GO:0001650,GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004528,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008081,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0033554,GO:0034599,GO:0034614,GO:0034641,GO:0042221,GO:0042578,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051336,GO:0051345,GO:0051716,GO:0065007,GO:0065009,GO:0070013,GO:0070887,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901700,GO:1901701,GO:1902544,GO:1902546
Exons3
Evalue6.13e-47
EggNOG OGsCOG0708@1|root,KOG1294@2759|Eukaryota
Ec32 ortholog descriptionpotential endonuclease
Ec32 orthologEc-12_002170.1
EC4.2.99.18
Descriptiondouble-stranded DNA 3'-5' exodeoxyribonuclease activity
Cds size1053
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03012,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186944.7756045-CDS-P-wetherbeei_contig6901:126..3241683186944.7756045-CDS-P-wetherbeei_contig6901:126..324Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6901 127..324 -
1683186944.7860236-CDS-P-wetherbeei_contig6901:497..6441683186944.7860236-CDS-P-wetherbeei_contig6901:497..644Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6901 498..644 -
1683186944.796343-CDS-P-wetherbeei_contig6901:763..14711683186944.796343-CDS-P-wetherbeei_contig6901:763..1471Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6901 764..1471 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6901.1.1prot_P-wetherbeei_contig6901.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6901 127..1471 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6901.1.1

>prot_P-wetherbeei_contig6901.1.1 ID=prot_P-wetherbeei_contig6901.1.1|Name=mRNA_P-wetherbeei_contig6901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=351bp
LLSVLLLVGSFAAFHAINKPNLEDGEMSNSNAGCRIVTWNVNGLRSVSAE
GGGLPSLLASLDAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNK
RHYSGVLTAVRRHDNVQGPKPASSAAAGGTVATAAGATSAPSPAVAAATD
SADVASAATASADNSSNDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVF
FGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASM
SEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMD
CSYRISEVELASSLWSRWLRRLLGMKVGDAAGGQPWQPQQPLQPQPQQML
P
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mRNA from alignment at P-wetherbeei_contig6901:125..1471-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6901.1.1 ID=mRNA_P-wetherbeei_contig6901.1.1|Name=mRNA_P-wetherbeei_contig6901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1347bp|location=Sequence derived from alignment at P-wetherbeei_contig6901:125..1471- (Phaeothamnion wetherbeei SAG_119_79)
CTCCTGTCTGTCCTTCTGCTCGTTGGGTCGTTTGCCGCCTTTCACGCTAT AAATAAACCCAACCTGGAAGACGGAGAGATGTCAAACAGCAATGCGGGCT GCCGCATCGTCACGTGGAACGTCAACGGACTGCGGAGCGTCAGCGCGGAA GGAGGCGGCCTCCCTTCGCTACTTGCGTCTCTTGATGCCGAAATCATCTG TTTCCAGGAGACGAAGGTCGTCCGCTCCGCCCTCGGCCCGGAACTGGCGT TGTCTCCGGGCTACCACCTCTACTTTACATTCTGCCGACTCCAGAACAAA AGACACTATAGCGGCGTCCTCACTGCCGTGCGCCGGCATGACAACGTGCA GGGGCCAAAGCCCGCGAGCTCTGCTGCTGCCGGCGGCACCGTCGCCACCG CCGCCGGGGCCACCAGCGCTCCCAGCCCTGCTGTCGCGGCCGCCACCGAT TCCGCCGATGTTGCCTCCGCCGCCACGGCCTCCGCCGACAACAGCTCGAA CGACCCCAAGCCCTCGACGCCCGCGCAGAGCTCCAGACGCGCGCGCTCGT GCGCCGTCGGCACGGCGGCAGCCACGACGAGGCTCGGCGATGACGTCTTC TTCGGCTGCCCGCTTCCGCCGGTCCTGGACGGACCGCGGGTGGCCGAGCT CGACGCCGAGGGCCGGATGGTGGCAACAGACCATGGCAGCTTCGTGCTCC TCAACGTGGTGAGTGCCTGCCTTGTAACTCAGCTGCCAATGTTTTGCTGA GGAAATGCAACCCTAATTCAGTCACGTATCTCGTTCCTCAATTTTGTGGA AGTTCTATCCCGGTTTTGAGCCGGCAGTACTCGCCGTGCTTGAGCAAGGA CTCCGAGGATGCTAGCATGAGCGAGTGGGAGCGCCAGCAAGTGCGGCTGC GGCGTCACTTTAAGGCGGACTTCACGGCAGCACTGACCATCCGCTGCCGC CAGCTCATGGTGGCGGGCCGCGAGGTGAGCGTGTTGTGAAGAGTAGGTTA CGTTTTGGAAACAAGCGACCTGCGGTATGTGCTGTAAGGGCTTTTAGGTT GAACGAGCTCTTCCATAATGATAAAATCGAACATCCGTTACTTTTCTTTG TTTTAGCTAACAACAATCCTTCCTTGCCACTACAATTCGCACGGCAGGTC GTCCTTGTCGGGGACCTCAATGCCTGCGCGACGACGATGGACTGCAGCTA CCGCATCTCGGAGGTGGAGCTGGCGTCCAGCTTGTGGTCTCGGTGGCTCC GGCGGCTGCTCGGCATGAAAGTGGGCGACGCCGCGGGAGGGCAGCCGTGG CAGCCGCAACAGCCGTTGCAGCCGCAACCACAACAAATGCTGCCATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6901:125..1471-

>mRNA_P-wetherbeei_contig6901.1.1 ID=mRNA_P-wetherbeei_contig6901.1.1|Name=mRNA_P-wetherbeei_contig6901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig6901:125..1471- (Phaeothamnion wetherbeei SAG_119_79)
CTCCTGTCTGTCCTTCTGCTCGTTGGGTCGTTTGCCGCCTTTCACGCTAT
AAATAAACCCAACCTGGAAGACGGAGAGATGTCAAACAGCAATGCGGGCT
GCCGCATCGTCACGTGGAACGTCAACGGACTGCGGAGCGTCAGCGCGGAA
GGAGGCGGCCTCCCTTCGCTACTTGCGTCTCTTGATGCCGAAATCATCTG
TTTCCAGGAGACGAAGGTCGTCCGCTCCGCCCTCGGCCCGGAACTGGCGT
TGTCTCCGGGCTACCACCTCTACTTTACATTCTGCCGACTCCAGAACAAA
AGACACTATAGCGGCGTCCTCACTGCCGTGCGCCGGCATGACAACGTGCA
GGGGCCAAAGCCCGCGAGCTCTGCTGCTGCCGGCGGCACCGTCGCCACCG
CCGCCGGGGCCACCAGCGCTCCCAGCCCTGCTGTCGCGGCCGCCACCGAT
TCCGCCGATGTTGCCTCCGCCGCCACGGCCTCCGCCGACAACAGCTCGAA
CGACCCCAAGCCCTCGACGCCCGCGCAGAGCTCCAGACGCGCGCGCTCGT
GCGCCGTCGGCACGGCGGCAGCCACGACGAGGCTCGGCGATGACGTCTTC
TTCGGCTGCCCGCTTCCGCCGGTCCTGGACGGACCGCGGGTGGCCGAGCT
CGACGCCGAGGGCCGGATGGTGGCAACAGACCATGGCAGCTTCGTGCTCC
TCAACGTGTACTCGCCGTGCTTGAGCAAGGACTCCGAGGATGCTAGCATG
AGCGAGTGGGAGCGCCAGCAAGTGCGGCTGCGGCGTCACTTTAAGGCGGA
CTTCACGGCAGCACTGACCATCCGCTGCCGCCAGCTCATGGTGGCGGGCC
GCGAGGTCGTCCTTGTCGGGGACCTCAATGCCTGCGCGACGACGATGGAC
TGCAGCTACCGCATCTCGGAGGTGGAGCTGGCGTCCAGCTTGTGGTCTCG
GTGGCTCCGGCGGCTGCTCGGCATGAAAGTGGGCGACGCCGCGGGAGGGC
AGCCGTGGCAGCCGCAACAGCCGTTGCAGCCGCAACCACAACAAATGCTG
CCA
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