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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 1367 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 1365 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186944.7391496-CDS-P-wetherbeei_contig6900:1344..2506 | 1683186944.7391496-CDS-P-wetherbeei_contig6900:1344..2506 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig6900 1345..2506 + |
| 1683186944.7511463-CDS-P-wetherbeei_contig6900:2960..3163 | 1683186944.7511463-CDS-P-wetherbeei_contig6900:2960..3163 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig6900 2961..3163 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6900.2.1 >prot_P-wetherbeei_contig6900.2.1 ID=prot_P-wetherbeei_contig6900.2.1|Name=mRNA_P-wetherbeei_contig6900.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=455bp
VGGSVRGSSGDEWEERRPGPPTLRRRGRSPLASILRHSKRRRAPSLPADR
AEAELDSVADPDEDDARQRRLHSGGGLPPAVKVDDIWTPGSPPDFVGGLP
GVEGTEIGSPKWAIPALMGPPAAVAMGAGAAAGSAGAASGAAVSSGGGGS
GGGGGGSDESRHSWRRPRRGGDHGGGGDVNCTADRNSASSGARGRRSVAF
LNTGTPPLKRRKYYEEDRLSEDAEADASGGVRGTGGSGGGGGSCARNGGG
SSSRVGGRGGGRGSGRGGGGGGGSVGDDRSDGAGGGDSDGWAGPGGDCER
DSVQLASPKRWPLRTVRLSESPSGANGRWAGRFGGGGDGGEPDAMVDGAR
SDESGCSRASRVVVINGGKERGRGGGAAYGSDEEDDDVAPMHFSTSSLDS
RSSAATRGDDTSYSDLSSDDFDSLSARSDGSLRPQRTVPTSQQQQEQQQA
MRIGG back to topmRNA from alignment at P-wetherbeei_contig6900:1345..3164+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig6900.2.1 ID=mRNA_P-wetherbeei_contig6900.2.1|Name=mRNA_P-wetherbeei_contig6900.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1820bp|location=Sequence derived from alignment at P-wetherbeei_contig6900:1345..3164+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGGAGGCTCCGTACGCGGCAGCAGCGGGGACGAGTGGGAGGAGCGGCG
CCCGGGCCCGCCTACGCTCCGTCGGCGGGGCCGCTCGCCGCTCGCCAGCA
TCCTCCGGCATTCCAAGCGGCGGCGGGCACCATCGCTGCCGGCGGACCGT
GCCGAGGCAGAGTTGGACAGCGTCGCCGACCCAGACGAAGACGATGCGCG
GCAGCGGCGCCTGCACAGCGGCGGCGGGCTGCCGCCAGCGGTCAAAGTGG
ATGACATTTGGACTCCGGGATCTCCGCCGGACTTTGTCGGAGGCCTGCCG
GGCGTGGAAGGCACCGAAATCGGGTCGCCCAAGTGGGCCATCCCGGCGTT
GATGGGACCGCCGGCGGCTGTTGCCATGGGGGCTGGTGCCGCCGCCGGTT
CGGCCGGGGCGGCCAGCGGGGCTGCCGTCAGCAGCGGTGGCGGCGGTAGT
GGCGGTGGCGGTGGCGGGAGCGATGAATCTCGCCACAGCTGGCGTCGCCC
GCGACGCGGTGGAGATCATGGCGGCGGTGGCGACGTGAACTGCACTGCTG
ACCGCAACAGTGCCAGCAGCGGCGCCCGCGGCCGCCGAAGCGTGGCATTT
TTGAACACGGGCACGCCCCCGTTGAAGCGGCGCAAGTACTACGAGGAGGA
CAGGCTATCCGAGGACGCGGAAGCCGATGCTAGCGGCGGAGTCAGAGGGA
CCGGCGGCAGCGGTGGTGGCGGTGGCAGCTGTGCAAGGAATGGCGGCGGC
AGCAGCAGCAGAGTTGGCGGCCGCGGCGGCGGCAGAGGAAGCGGTCGCGG
CGGAGGCGGCGGCGGCGGCAGCGTCGGTGACGACCGCAGCGATGGCGCGG
GCGGCGGCGACAGTGATGGCTGGGCCGGCCCTGGCGGCGACTGCGAGAGG
GACAGCGTTCAGCTGGCATCGCCGAAACGATGGCCGTTGCGCACCGTGCG
ACTTTCGGAAAGTCCTTCCGGAGCCAACGGGCGCTGGGCGGGACGCTTCG
GCGGCGGCGGCGACGGCGGCGAGCCGGACGCCATGGTGGACGGCGCCCGC
AGCGACGAGAGTGGCTGCAGCCGCGCCAGCCGGGTAGTGGTAATCAACGG
CGGGAAAGAGAGAGGCCGCGGCGGGGGCGCGGCGTATGGCTCCGACGAGG
AGGATGACGACGGTGAGCCGCATGCGCTTCTCTTTCAGCGGCAACCGGTG
TCTGCTTTCCTCCCATTCCACTTTTTCTTCTTCCTTTTGTTTCGACCGCC
TTATCCTAAGCGTGCGCCTGCCGATCGCGTGCGGCAGTTTGTAGCGATGT
GTGACGTGGATTGGCGAAAGTGAGTTAGAAAAATGCCATGGAATGTGAAA
GATGAGCTTTTGCCACTCATTTTCAAGATTGCGACATGTCGTCGCTGTGA
CGTATTCGCGAACGACCGCTGCAAGCTGCTGCTTTTTGCCCGCCTGCCGC
AGCTGCCGGCGCCTCACCGCCGCCGCTGCCATTCCCCGCCTATCCTCATG
CCTTTCCCGAAACGTCTTCTTCTCCGACCCCCTTCCCTACTCACCCGTTT
CGACCGTTCGGTCGTGTCGTCCCCCCGACATCATTCAAACGCTTTTTCCC
CCATTACATGTACCAGTGGCCCCGATGCACTTCTCAACATCGTCGCTGGA
CAGCCGGTCGTCGGCGGCGACGCGCGGTGACGACACGTCCTACTCGGACC
TCTCATCGGACGACTTCGACTCGCTGTCGGCGCGCTCTGACGGCAGCCTC
CGTCCGCAGCGGACGGTGCCGACGTCGCAGCAGCAGCAGGAGCAGCAGCA
GGCGATGCGGATCGGCGGCG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig6900:1345..3164+ >mRNA_P-wetherbeei_contig6900.2.1 ID=mRNA_P-wetherbeei_contig6900.2.1|Name=mRNA_P-wetherbeei_contig6900.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1365bp|location=Sequence derived from alignment at P-wetherbeei_contig6900:1345..3164+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGGAGGCTCCGTACGCGGCAGCAGCGGGGACGAGTGGGAGGAGCGGCG
CCCGGGCCCGCCTACGCTCCGTCGGCGGGGCCGCTCGCCGCTCGCCAGCA
TCCTCCGGCATTCCAAGCGGCGGCGGGCACCATCGCTGCCGGCGGACCGT
GCCGAGGCAGAGTTGGACAGCGTCGCCGACCCAGACGAAGACGATGCGCG
GCAGCGGCGCCTGCACAGCGGCGGCGGGCTGCCGCCAGCGGTCAAAGTGG
ATGACATTTGGACTCCGGGATCTCCGCCGGACTTTGTCGGAGGCCTGCCG
GGCGTGGAAGGCACCGAAATCGGGTCGCCCAAGTGGGCCATCCCGGCGTT
GATGGGACCGCCGGCGGCTGTTGCCATGGGGGCTGGTGCCGCCGCCGGTT
CGGCCGGGGCGGCCAGCGGGGCTGCCGTCAGCAGCGGTGGCGGCGGTAGT
GGCGGTGGCGGTGGCGGGAGCGATGAATCTCGCCACAGCTGGCGTCGCCC
GCGACGCGGTGGAGATCATGGCGGCGGTGGCGACGTGAACTGCACTGCTG
ACCGCAACAGTGCCAGCAGCGGCGCCCGCGGCCGCCGAAGCGTGGCATTT
TTGAACACGGGCACGCCCCCGTTGAAGCGGCGCAAGTACTACGAGGAGGA
CAGGCTATCCGAGGACGCGGAAGCCGATGCTAGCGGCGGAGTCAGAGGGA
CCGGCGGCAGCGGTGGTGGCGGTGGCAGCTGTGCAAGGAATGGCGGCGGC
AGCAGCAGCAGAGTTGGCGGCCGCGGCGGCGGCAGAGGAAGCGGTCGCGG
CGGAGGCGGCGGCGGCGGCAGCGTCGGTGACGACCGCAGCGATGGCGCGG
GCGGCGGCGACAGTGATGGCTGGGCCGGCCCTGGCGGCGACTGCGAGAGG
GACAGCGTTCAGCTGGCATCGCCGAAACGATGGCCGTTGCGCACCGTGCG
ACTTTCGGAAAGTCCTTCCGGAGCCAACGGGCGCTGGGCGGGACGCTTCG
GCGGCGGCGGCGACGGCGGCGAGCCGGACGCCATGGTGGACGGCGCCCGC
AGCGACGAGAGTGGCTGCAGCCGCGCCAGCCGGGTAGTGGTAATCAACGG
CGGGAAAGAGAGAGGCCGCGGCGGGGGCGCGGCGTATGGCTCCGACGAGG
AGGATGACGACGTGGCCCCGATGCACTTCTCAACATCGTCGCTGGACAGC
CGGTCGTCGGCGGCGACGCGCGGTGACGACACGTCCTACTCGGACCTCTC
ATCGGACGACTTCGACTCGCTGTCGGCGCGCTCTGACGGCAGCCTCCGTC
CGCAGCGGACGGTGCCGACGTCGCAGCAGCAGCAGGAGCAGCAGCAGGCG
ATGCGGATCGGCGGC back to top
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