mRNA_P-wetherbeei_contig6899.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6899.1.1 vs. uniprot
Match: D8LLH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH3_ECTSI) HSP 1 Score: 103 bits (256), Expect = 8.620e-22 Identity = 77/240 (32.08%), Postives = 114/240 (47.50%), Query Frame = 1
Query: 88 LDFYVEAVGSIDGSRKAFFELLPLAQPSIEEAHHLNWTRDVEEREVERLTAEVADLTSQLXXXXXXLMTRETTMQAMRRDQVDDRVRIQRLLALCQPITGDLTFVVGGLEPSGA---VGVTGRNAAAVAASVAGED---AAARLPPVRSQAYVEYLQKRTELMNAHTTCLIKLGGEYVAALRGDELERDAQADAQRQRADGLRTTLARRLATVDAVLENVTGDYLALRHNARQAHAANAD 789
++ Y EA+ +I+ R + L QPS EE H L W R +E E+ L EV +++ ++ L RE ++A+R +Q DR++IQ LLAL QPIT D+T V L P + R + + S ++ A P R + H L +L G + L D+ ER+ A Q+ A + L RR A V+ L T DYL LRH A++AHA +A+
Sbjct: 1 MECYQEAMRAIERERINVLNKIDLVQPSFEEQHQLEWGRRYQEEELLALRLEVGEVSREVEAETKQLRDREEIIRAIRDEQRQDRIKIQTLLALSQPITPDITVVFQALAPDACPPPLPPPSRGSRPLDRSSVPQNNRRAVTSNSPSRRSVAAAATAGTSAGRGRHLRELERLEGSFHETLTRDKQEREMHARVQKDNAARVMEALGRRTAEVEKRLSGATDDYLRLRHKAKEAHAVSAE 240
BLAST of mRNA_P-wetherbeei_contig6899.1.1 vs. uniprot
Match: A0A8J9ZYA9_BRALA (CCDC77 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZYA9_BRALA) HSP 1 Score: 65.5 bits (158), Expect = 2.410e-8 Identity = 69/256 (26.95%), Postives = 100/256 (39.06%), Query Frame = 1
Query: 85 LLDFYVEAVGSIDGSRKAFFELLPLAQPSIEEAHHLNWTRDVEEREVERLTAEVADLTSQLXXXXXXLMTRETTMQAMRRDQVDDRVRIQRLLALCQPITGDLTFVVGGLEPSGAVGVT-----------GRNAAAVAASVAGEDAAARLPPVR-----------SQAYVEYLQKRTELMNAHTTCL-------IKLGGEYVAALRGDELERDAQADAQRQRADGLRTTLARRLATVDAVLENVTGDYLALRHNAR 765
LL++Y + + DG + L L + + EE H L W E E+ L ++D+ L ++ + ++ +++DR RIQ LL+L P TGD+T+ EP V + G A+ E A R PP R + E QK E + H L KL E AL D R + DAQRQR L RL +L T D+L L++ R
Sbjct: 102 LLEYYRKKIAEFDGDHEEMVRKLDLYKATYEEQHKLGWEMRQREDEIAELQKALSDMQVYLFQEREHVLRLYSENDRLKIRELEDRKRIQHLLSLSGPQTGDITYFHR--EPPAKVTIPQRRPRQQHPHDGDEGVALRPPADRETADVRRPPHRQAKPRKPADKLTSPETEAYQKDNETLALHVEALQAQLEEQTKLAREQAEALLQDRQVRIEEQDAQRQRDADRIKGLTDRLQKTQDLLFTSTKDFLELKYEGR 355
BLAST of mRNA_P-wetherbeei_contig6899.1.1 vs. uniprot
Match: A0A662YQN2_ACIRT (Coiled-coil domain-containing protein 77 n=3 Tax=Acipenseroidei TaxID=186622 RepID=A0A662YQN2_ACIRT) HSP 1 Score: 64.3 bits (155), Expect = 4.950e-8 Identity = 65/242 (26.86%), Postives = 98/242 (40.50%), Query Frame = 1
Query: 85 LLDFYVEAVGSIDGSRKAFFELLPLAQPSIEEAHHLNWTRDVEEREVERLTAEVADLTSQLXXXXXXLMTRETTMQAMRRDQVDDRVRIQRLLALCQPITGDLTFV-----------VGGLEPSGAVG--VTGRNAAAVAASVAGEDAAARLP--PVRSQAYVEYLQKRTELMNAHTTCLIKLGGEYVAALRGDELERDAQADAQRQRADGLRTTLARRLATVDAVLENVTGDYLALRHNAR 765
LL+FY V DG + ++L + + EE H L W E E+ L ++D+ L + ++ ++DDR +IQ LLAL P G++T+ ++PS G VTG +V+ A P P R + + L + E + A KL E V +L D R +A Q QR TTL +L +L T D+L L+ R
Sbjct: 35 LLEFYRRKVSEFDGEHEDMMKVLDTYRSTYEEQHKLQWEMRQREGEIAELQKALSDMQVYLFQEREHALRLYAENDRLKIRELDDRKKIQHLLALVGPDDGEITYFHKEPPHKVTISQKKVQPSDQSGREVTGTTKPVTRRTVSKSAGRAESPASPERYKKDNQTLLLQVEALQAQMEEQTKLAKEQVESLLEDRRIRMEEAQVQHQRDQDRITTLTDKLHRTQTLLYESTKDFLQLKFEGR 276
BLAST of mRNA_P-wetherbeei_contig6899.1.1 vs. uniprot
Match: A0A8D3ABZ3_SCOMX (Uncharacterized protein n=3 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3ABZ3_SCOMX) HSP 1 Score: 61.2 bits (147), Expect = 5.360e-7 Identity = 63/248 (25.40%), Postives = 104/248 (41.94%), Query Frame = 1
Query: 85 LLDFYVEAVGSIDGSRKAFFELLPLAQPSIEEAHHLNWTRDVEEREVERLTAEVADLTSQLXXXXXXLMTRETTMQAMRRDQVDDRVRIQRLLALCQPITGDLTFVVGGLEPSGAVGVTGRNAAA------------VAASVAGEDAAARLPP---VRSQAYVEYLQKRTELM------NAHTTCLIKLGGEYVAALRGDELERDAQADAQRQRADGLRTTLARRLATVDAVLENVTGDYLALRHNAR 765
LL+FY E + DG + ++L + E+ H L W E E+ L ++D+ L + ++ +++DR +IQ LLAL P G++T+ EP V +T RN A ASV ++++ R P V ++ +Y L+ A ++L E + L D + +A AQRQR T L +L +L T D+L L+ ++R
Sbjct: 42 LLEFYREKIAQYDGEHEELLKMLEKHKSITEDQHKLQWEVRQREGEIAELQNALSDMQVYLFQEREQSLRLYAENDRLKIRELEDRKKIQHLLALVGPDAGEITYFHR--EPPHKVTITQRNHEARLEENLSLRPSKFRASVNVKESSRRTKPADGVNGESLEQYKNDNQTLLLQVGALQAQMEEQVRLAKEQIEGLMEDRRIKTEEAHAQRQRDQERITALTDKLQRTQNLLYESTKDFLQLKFDSR 287
BLAST of mRNA_P-wetherbeei_contig6899.1.1 vs. uniprot
Match: A0A6P4YXL1_BRABE (LOW QUALITY PROTEIN: coiled-coil domain-containing protein 77-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YXL1_BRABE) HSP 1 Score: 60.5 bits (145), Expect = 9.760e-7 Identity = 68/257 (26.46%), Postives = 99/257 (38.52%), Query Frame = 1
Query: 85 LLDFYVEAVGSIDGSRKAFFELLPLAQPSIEEAHHLNWTRDVEEREVERLTAEVADLTSQLXXXXXXLMTRETTMQAMRRDQVDDRVRIQRLLALCQPITGDLTFVVGGLEPSGAVGVT-----------GRNAAAVAASVAGEDAAARLP------------PVRSQAYVEYLQKRTELMNAHTTCL-------IKLGGEYVAALRGDELERDAQADAQRQRADGLRTTLARRLATVDAVLENVTGDYLALRHNAR 765
LL++Y + + DG + L + + EE H L W E E+ L ++D+ L + ++ +++DR RIQ LL+L P TGD+T+ EP V + G A+ S E A R P P+ + E QK E + H L +L E AL D R + DAQRQR L RL +L + T DYL L++ R
Sbjct: 51 LLEYYRKKIAEFDGDHEEMVRKLDQYKATYEEQHKLGWEMRQREDEIAELQKALSDMQVYLFQEREHVXRLYAENDRLKIRELEDRKRIQHLLSLSGPETGDITYFHR--EPPAKVTIPQRRPRQQHPHDGDEGVALRPSADREAADMRRPHRQAKPRKLADKPISPE--TEAYQKDNETLALHVEALQAQLEEQTRLAREQAEALLQDRQVRIEEQDAQRQRDTDRIKGLTDRLQKTQDLLYSSTKDYLELKYEGR 303
BLAST of mRNA_P-wetherbeei_contig6899.1.1 vs. uniprot
Match: A0A6J2PZQ3_COTGO (coiled-coil domain-containing protein 77 isoform X1 n=5 Tax=Notothenioidei TaxID=8205 RepID=A0A6J2PZQ3_COTGO) HSP 1 Score: 59.3 bits (142), Expect = 2.370e-6 Identity = 62/249 (24.90%), Postives = 99/249 (39.76%), Query Frame = 1
Query: 85 LLDFYVEAVGSIDGSRKAFFELLPLAQPSIEEAHHLNWTRDVEEREVERLTAEVADLTSQLXXXXXXLMTRETTMQAMRRDQVDDRVRIQRLLALCQPITGDLTFVVGGLEPSGAVGVTGRNAA----------------AVAASVAGEDAAARLPPVRSQAYVEY------LQKRTELMNAHTTCLIKLGGEYVAALRGDELERDAQADAQRQRADGLRTTLARRLATVDAVLENVTGDYLALRHNAR 765
LL+FY E + DG + ++L + E+ H + W E E+ L ++D+ L + ++ +++DR +IQ LLAL P G++T+ EP V VT RNA AV V ++ +Y L + E + A +L E V +L D + +A AQRQ+ T L +L +L T D+L L+ +AR
Sbjct: 60 LLEFYREKIAQFDGEHEELLQMLEKYRGITEDQHKIQWEVRQREGEIAELQNALSDMQVYLYQEREQSLRLYAENDRLKIRELEDRKKIQHLLALVGPDAGEITYFHR--EPPHKVTVTQRNAESSLEENLNLRPTKLRHAVTRKAESSRRTKSTDGVNGESLEQYKNDNQTLLLQVEALQAQMEEQTRLAKEQVESLLEDRQIKSEEAQAQRQKDQERITALTDKLQQTQNLLYESTRDFLQLKFDAR 306
BLAST of mRNA_P-wetherbeei_contig6899.1.1 vs. uniprot
Match: A0A835ZIT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIT2_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.850e-6 Identity = 30/88 (34.09%), Postives = 48/88 (54.55%), Query Frame = 1
Query: 139 FFELLPLAQPSIEEAHHLNWTRDVEEREVERLTAEVADLTSQLXXXXXXLMTRETTMQAMRRDQVDDRVRIQRLLALCQPITGDLTFV 402
F + + + QPS EE H + W + ERE+ + E A L + + R + + +Q +DR R+QRLLALCQP++ D+T +
Sbjct: 46 FRKQIEMVQPSQEERHRIEWQLEALERELAVASGEAASLRASTGTAGAAIAARAAAIAELLAEQREDRTRVQRLLALCQPVSHDVTVL 133
BLAST of mRNA_P-wetherbeei_contig6899.1.1 vs. uniprot
Match: A0A672RVQ9_SINGR (Coiled-coil domain-containing protein 77-like n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672RVQ9_SINGR) HSP 1 Score: 57.0 bits (136), Expect = 1.280e-5 Identity = 64/251 (25.50%), Postives = 97/251 (38.65%), Query Frame = 1
Query: 85 LLDFYVEAVGSIDGSRKAFFELLPLAQPSIEEAHHLNWTRDVEEREVERLTAEVADLTSQLXXXXXXLMTRETTMQAMRRDQVDDRVRIQRLLALCQPITGDLTFVVGGLE-----PSGAVGVTGRNAAAVA------------ASVAGEDAAARLPPVRSQAYVEYLQKRTELMNAHTTCLIKLGGEYVAALRGDELERDAQADAQRQRADGLRTTLARRLATVDAVLENVTGDYLAL----RHNARQAH 774
LLDFY + V DG ++L + + EE H L W E E+ L ++D+ L + ++ +++DR +IQ LLAL P G++T+ P V + R + V +S GEDA + R + L + E + A +L E V AL D + Q QR T L +L ++L T D+L L RH + Q H
Sbjct: 57 LLDFYRQKVAQFDGEHDDLLQMLEKYRSTAEEQHKLQWEVRQREEEIAELQNALSDMQVYLFQEREQALRLYAENDRLKIRELEDRKKIQHLLALVGPDPGEITYFHREPPHTVTIPQKKVQLRSREESKVVKPRPVSVKGSKKSSKDGEDATSSEQYKRD---TQTLLLQVEALQAQLEEQTRLAKEQVEALLEDRRIHQEERQVQHQRDQDAITALTDKLQRTQSLLYESTRDFLQLKFESRHESSQTH 304
BLAST of mRNA_P-wetherbeei_contig6899.1.1 vs. uniprot
Match: A0A3Q0SQ34_AMPCI (Coiled-coil domain containing 77 n=2 Tax=Heroini TaxID=318529 RepID=A0A3Q0SQ34_AMPCI) HSP 1 Score: 55.8 bits (133), Expect = 3.060e-5 Identity = 63/253 (24.90%), Postives = 106/253 (41.90%), Query Frame = 1
Query: 85 LLDFYVEAVGSIDGSRKAFFELLPLAQPSIEEAHHLNWTRDVEEREVERLTAEVADLTSQLXXXXXXLMTRETTMQAMRRDQVDDRVRIQRLLALCQPITGDLTFVVGGLEPSGAVGVTGRNAAAVAASVAGEDAAAR---LPPVRS--------QAYVEY------LQKRTELMNAHTTCLIKLGGEYVAALRGDELERDAQADAQRQRADGLRTTLARRLATVDAVLENVTGDYLALRHNARQAHAANADE 792
LL+FY + + D ++L + E+ H L W E E+ L + ++D+ L + ++ +++DR +IQ LLAL P TG++T+ EP V ++ R S E+ + R L P R+ ++ +Y L + E + A +L E V AL D + +A AQRQR L +L +L T D+L L+ + RQ + ++E
Sbjct: 62 LLEFYRQKIXQFDSEHLELLQMLEKYKSLTEDQHKLQWEIRQREGEIAELQSALSDMQVYLFQEREQSLRLYAENDRLKIRELEDRKKIQHLLALVGPDTGEITYFHR--EPPHKVTISQR----FPESRLEENLSLRPTKLRPTRAKSTDGVNGESLEQYKNENQTLLLQVEALQAQMEEQTRLAKEQVEALLEDRRIKTEEAQAQRQRDQDRIAALTDKLQRTQNLLHESTRDFLQLKFDTRQHNNPPSEE 308
BLAST of mRNA_P-wetherbeei_contig6899.1.1 vs. uniprot
Match: UPI001BF4175F (coiled-coil domain-containing protein 77 n=2 Tax=Alosa TaxID=34772 RepID=UPI001BF4175F) HSP 1 Score: 55.8 bits (133), Expect = 3.200e-5 Identity = 59/243 (24.28%), Postives = 99/243 (40.74%), Query Frame = 1
Query: 85 LLDFYVEAVGSIDGSRKAFFELLPLAQPSIEEAHHLNWTRDVEEREVERLTAEVADLTSQLXXXXXXLMTRETTMQAMRRDQVDDRVRIQRLLALCQPITGDLTFVVGGLEPSGAVGVTGRNAAA-------VAASVAGEDAAARLPP--VRSQAYVEYLQK-------RTELMNAHTTCLIKLGGEYVAALRGDELERDAQADAQRQRADGLRTTLARRLATVDAVLENVTGDYLALRHNAR 765
LL+FY + V DG + ++L + S E+ H L W E E+ L ++D+ L + ++ +++DR +IQ LLAL P G++T+ EP + + V+ S A ++ + +L V S E +K + E + A +L E V +L D R + Q QR T L +L +L T D+L L+ ++R
Sbjct: 42 LLEFYRQKVAQFDGEHEDLLQMLEKYRSSTEDQHKLQWEVRQREGEIAELQKALSDMQVYLFQEREQALRLYAENDRLKIRELEDRKKIQHLLALVGPDVGEITYFHR--EPPNKITIPQNKVQPRPQDQWKVSKSKAAKETSKKLSREGVESGETAEQYKKDNQTLLLQVEALQAQMEEQTRLAKEQVESLLEDRRIRVEEVQVQHQRDQDRITALTNKLQRTQTLLYESTRDFLQLKFDSR 282 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6899.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6899.1.1 >prot_P-wetherbeei_contig6899.1.1 ID=prot_P-wetherbeei_contig6899.1.1|Name=mRNA_P-wetherbeei_contig6899.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=278bp LPQLPHTTLASASACWKKIMAEADHSAALLDFYVEAVGSIDGSRKAFFELback to top mRNA from alignment at P-wetherbeei_contig6899:1163..2035- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6899.1.1 ID=mRNA_P-wetherbeei_contig6899.1.1|Name=mRNA_P-wetherbeei_contig6899.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=873bp|location=Sequence derived from alignment at P-wetherbeei_contig6899:1163..2035- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6899:1163..2035- >mRNA_P-wetherbeei_contig6899.1.1 ID=mRNA_P-wetherbeei_contig6899.1.1|Name=mRNA_P-wetherbeei_contig6899.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig6899:1163..2035- (Phaeothamnion wetherbeei SAG_119_79)back to top |