mRNA_P-wetherbeei_contig689.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig689.1.1
Unique NamemRNA_P-wetherbeei_contig689.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig689.1.1 vs. uniprot
Match: A0A6H5L6R3_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R3_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.720e-31
Identity = 99/334 (29.64%), Postives = 142/334 (42.51%), Query Frame = 3
Query:   51 GFLHAPVCKAVFLTSLLATSAALARGQDPSVNLL--HVLSRRDPWWRVLPALSCYGGVLDLLSGLQLTHAVRVVEREMGSGKFGAFLFLVATLALSLEAALSVRWPGLRLAPGPLPLLAAALTFYFGYVPAYGATLLRLPPSFTCG----TGKITVGMAAAFLFLRGALSTAVPAAAGILAAVLYATDALPLKQFRLPRPVRRLFGLLHPLLRSDDPRDVRRRVMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAIETLQGLGFDREAAIRALQATDNNVEAAANRLLGH 1034
            GF  APV K++ + + ++T   L      +  L+   V      WWR+L ++   G V +L+  L +    R++ER +GS KFG+FLFL A L+ S+E AL V +P  R   GPLP+L+A    Y+GY+P+        P   T G    TGK     A   L      ++A+ A  G++ A+LY +   PL+ FR+P   R+LF +        +  + RR  +                                                                       EE I  L GLGFDRE  +R L++T NN EAAANRLLGH
Sbjct:    5 GFAGAPVSKSLAIVTAVSTLVVLQNNSQDTAALIGIRVFGDDGQWWRLLTSMFPLGSVWELILCLNIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRPPLGPLPILSAVGVAYYGYIPS------TAPAYLTVGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPG--RQLFAICGAAFPGGNQIEARRAQITRIQNIVGRRRQADRMLAGVAGADAGPATGLRQRMEIPAPS------------------------------EEDITLLMGLGFDRETVVRVLRSTGNNTEAAANRLLGH 300          
BLAST of mRNA_P-wetherbeei_contig689.1.1 vs. uniprot
Match: D8LPP7_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP7_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.310e-25
Identity = 72/207 (34.78%), Postives = 109/207 (52.66%), Query Frame = 3
Query:   51 GFLHAPVCKAVFLTSLLATSAALARGQDPSVNLLHVLSRRDP--WWRVLPALSCYGGVLDLLSGLQLTHAVRVVEREMGSGKFGAFLFLVATLALSLEAALSVRWPGLRLAPGPLPLLAAALTFYFGYVPAYGATLLRLPPSFTCG----TGKITVGMAAAFLFLRGALSTAVPAAAGILAAVLYATDALPLKQFRLPRPVRRLFGL 653
            GF  APV K++ + + ++T   L      +  L+ V    D   WWR+L ++   G V +L+  L +    R++ER +GS KFG+FLFL A L+ S+E AL V +P  R   GPLP+L+A    Y+GY+P+        P   T G    TGK     A   L      ++A+ A  G++ A LY ++  PL+ FR+P   R+LF +
Sbjct:    5 GFAGAPVSKSLAIITAVSTLVVLQNNSQDTAALIGVRVFGDDGQWWRLLTSMFPLGSVWELILCLNIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPVFRPPLGPLPILSAVGVAYYGYIPS------TAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVAFLYWSNRSPLQSFRIPG--RQLFAV 203          
BLAST of mRNA_P-wetherbeei_contig689.1.1 vs. uniprot
Match: A0A6G0XD48_9STRA (UBA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XD48_9STRA)

HSP 1 Score: 104 bits (259), Expect = 4.520e-22
Identity = 95/335 (28.36%), Postives = 137/335 (40.90%), Query Frame = 3
Query:   51 GFLHAPVCKAVFLTSLLATSAALARGQDPSVNL-LHVLSRRDPWWRVLPALSCYGGVLDLLSGLQLTHAVRVVEREMGSGKFGAFLFLVATLALSLEAALSVRWPGLRLAPGPLPLLAAALTFYFGYVPAYGATLLRLPPSFTCGTG-----KITVGMAAAFLFLRGALSTAVPAAAGILAAVLYATDALPLKQFRLPRPVRRLFGLLHPLLRSDDP---RDVRRRVMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAIETLQGLGFDREAAIRALQATDNNVEAAANRLL 1028
            GF  APV  A    + +A++ AL       + L L  + +   +WR+L     +   + +  G+      RV+ER+ GS KFG F+ LV  ++  L+   S++ P +   PGP PL+ A L  YFG +P       +L PS     G     K ++    + + LR    T  P + GIL   LY +  LPL + R+P  +   F L HPL     P   +  R+R +M                                                                      E+AIE L  LGF+R+ A+ ALQA+DNNVEAAANRLL
Sbjct:    7 GFYKAPVTYAYMCATGMASTGALFMDMRQHLTLDLPAVMKYSQYWRLLTCHFAFDNGIAVALGMYAIFQFRVIERQFGSNKFGTFVILVLLISTILQT--SLKLPAI---PGPYPLIGALLVIYFGNIP-------KLQPSLYNAMGVQISDKSSLYAMLSVICLRS-FGTTFPFSTGILVGALYQSKYLPLSRLRVPSFLTWFFELFHPLFMVVPPSLLQQQRQRQLMEAQRRAGFHNAAAGVGGFREQLIPGMGVPARHQTPPS---------------------------------EDAIEQLTALGFERDRAVAALQASDNNVEAAANRLL 295          
BLAST of mRNA_P-wetherbeei_contig689.1.1 vs. uniprot
Match: A0A1W0A914_9STRA (UBA domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A914_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.130e-19
Identity = 91/332 (27.41%), Postives = 130/332 (39.16%), Query Frame = 3
Query:   51 GFLHAPVCKAVFLTSLLATSAALARGQDPSVNL-LHVLSRRDPWWRVLPALSCYGGVLDLLSGLQLTHAVRVVEREMGSGKFGAFLFLVATLALSLEAALSVRWPGLRLAPGPLPLLAAALTFYFGYVPAYGATLLRLPPSFTCGTG-----KITVGMAAAFLFLRGALSTAVPAAAGILAAVLYATDALPLKQFRLPRPVRRLFGLLHPLLRSDDPRDVRRRVMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAIETLQGLGFDREAAIRALQATDNNVEAAANRLL 1028
            G    PV  A    + L ++AA+   +   ++L L  + ++  +WR+L +   +G  + +  G+ L  + RV+ER+ GS KFG+F+ LV TL+  L+  L        +A GP  L+ A +  YFG VP       +L P F    G     K         +  RG + T  P   G+L  +LY T +LPL +FRLP  +   F + HP+                                                                                     E AIE L  LGF+RE AI AL+  DNNVEAAANRLL
Sbjct:    8 GLYKTPVTYAYMSATGLMSAAAIFFDRPNEMHLDLRKIGKQSQYWRLLTSHFGFGDGVAVAFGIYLIFSCRVLERQFGSKKFGSFVVLVMTLSSLLQIGLLKFKFVKSIASGPYALIGALMVLYFGNVP-------KLQPHFVRAMGIAFSDKSPTYFMMCLVCFRG-IDTITPFLTGVLVGLLYQTKSLPLHKFRLPSFLCWFFEIFHPIF------------------------------MVVPAAAAVQQRQRQLQEMQRRAAAMGQPNGQGFREQLIPGMGGGMPIPVAPPSEAAIEQLTALGFEREQAIAALRTADNNVEAAANRLL 301          
BLAST of mRNA_P-wetherbeei_contig689.1.1 vs. uniprot
Match: A0A024UD62_9STRA (UBA domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UD62_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 4.300e-19
Identity = 92/330 (27.88%), Postives = 133/330 (40.30%), Query Frame = 3
Query:   51 GFLHAPVCKAVFLTSLLATSAALARGQDPSVNL-LHVLSRRDPWWRVLPALSCYGGVLDLLSGLQLTHAVRVVEREMGSGKFGAFLFLVATLALSLEAALSVRWPGLRLAPGPLPLLAAALTFYFGYVPAYGATLLRLPPSFTCGTGKITVGMAAAFLFLRGALSTAVPAAAGILAAVLYATDALPLKQFRLPRPVRRLFGLLHPLLR---SDDPRDVRRRVMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAIETLQGLGFDREAAIRALQATDNNVEAAANRLL 1028
            GF   PV  A    + +A+ AAL       + L L  +++   +WR+L         + +  G+ +    RV+ER+ GS KFG F+ LV   + +L+      W  L   PGP PL+ A    Y+  VP     L  L       T K ++    + + LR   STA P A G+L  +LY +  LPL + R+P  +   F + HP+     +   +  R+R ++                                                                      E+AI  L GLGFDR+ AI ALQA+DNNVEAAANRLL
Sbjct:    7 GFYKTPVTYAYLSATGMASVAALFMDMRHQLTLDLVSVTKLSQYWRLLTCHFALDNGIAVAFGMYVLFQFRVIERQFGSNKFGTFIILVLLTSTALQV-----WLKLPTTPGPYPLIGALAVIYYHNVPLLQPRLYSLLGLNV--TDKSSIYGLLSLVCLRS-YSTAFPFATGVLVGLLYQSKYLPLSKLRVPGFLAWFFEVFHPIFMVVPATVLQQQRQRHLLEAQRRQATAIGRGHSHQEVGHGFRDQLIPGMGQAPFHQRMPPS---------------------------EDAISQLTGLGFDRDRAIAALQASDNNVEAAANRLL 301          
BLAST of mRNA_P-wetherbeei_contig689.1.1 vs. uniprot
Match: A0A2D4C2S4_PYTIN (UBA domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2S4_PYTIN)

HSP 1 Score: 95.9 bits (237), Expect = 7.520e-19
Identity = 99/334 (29.64%), Postives = 133/334 (39.82%), Query Frame = 3
Query:   51 GFLHAPVCKAVFLTSLLATSAALARGQDPSVNLL--HVLSRRDPWWRVLPALSCYGGVLDLLSGLQLTHAVRVVEREMGSGKFGAFLFLVATLALSLEAALSVRWPGL--RLAPGPLPLLAAALTFYFGYVPAYGATLLRLPPSFTCGTGKITVGMAAAFLFLRGALSTAVPAAAGILAAVLYATDALPLKQFRLPRPVRRLFGLLHPLL----RSDDPRDVRRRVMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAIETLQGLGFDREAAIRALQATDNNVEAAANRLL 1028
            GF  APV  A  L    A+SA L    +   +LL    + RR  +WR+  +   +   L    GL +    RV+ER+MGS KFG+ +F + T++  L+ A  +  P L  R  PGP  LL A   F+  +VP        +            V MAA  L     L + +P   G+L  VL+++   PL + RLP  V  LF + HP       S   +  +RR++                                                                       E+AI  L  LGFDRE AI ALQATDNNVEAAANRLL
Sbjct:    7 GFYGAPVTYAASLAIGAASSATLLFDMEGPFSLLGRDAVVRRGQYWRLWSSQLAFHHGLAASFGLYIIFQFRVLERQMGSRKFGSLVFFIWTISALLKLAALLSMPSLARRXPPGPYALLGALTVFFMKFVPRLHPKAYSIVGINFSDKSSTYVLMAAILLHDPRKLLSYIP---GMLLGVLFSST--PLSKLRLPGFVCVLFSIFHPFFDVVPASVIAQQRQRRIL------------------EAQRRLGVRGNQGNAAAQGGHGFRDQLLPGAGAVMGGAAGAMMPPRMAATPPSEDAINQLLALGFDRERAIEALQATDNNVEAAANRLL 317          
BLAST of mRNA_P-wetherbeei_contig689.1.1 vs. uniprot
Match: A0A6V1Q7N2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q7N2_HETAK)

HSP 1 Score: 91.7 bits (226), Expect = 1.680e-17
Identity = 77/304 (25.33%), Postives = 123/304 (40.46%), Query Frame = 3
Query:  129 QDPSVNLLHVLSRRDPWWRVLPALSCYGGVLDLLSGLQLTHAVRVVEREMGSGKFGAFLFLVATLALSLE-AALSVRWPGLRLAPGPLPLLAAALTFYFGYVPAY---GATLLRLPPSFTCGTGKITVGMAAAFLFLRGALSTAVPAAAGILAAVLYATDALPLKQFRLPRPVRRLFGLLHPLLRSDDPRDVRRRVMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAIETLQGLGFDREAAIRALQATDNNVEAAANRLL 1028
            Q  +V+L  VL   + +W ++P++  +    +L+ G+ L +  R+ ER MGS K+GAFL +V     ++E  A+S+    LR  PGP   + AA   Y+  +P+      +  +        + K    +  A LF    +S+ +PA +G+L  + Y T    L + +LP  + + F  L P + S   R  + +                                                                         +E+I TL  LGFDRE  +RALQA+ NNV+ AANRLL
Sbjct:    3 QKKTVDLNRVLKNGE-FWSMVPSMIAFSSTGELIVGVMLLYTFRIFERHMGSPKYGAFLAIVGIAGKAMEIGAISILQGKLRPQPGPYSAIYAAFVLYYATIPSSRGSSGSSAKNSRGLALLSDKTMTYLLGAQLFWGSGISSIIPAMSGVLMGLAYRTGMCRLDKLKLPSYLLKAFKTLKPFVESTSARPAQPQ---------------RQTRGNNVHMGGPVGQAGVRSAQEQLIGGGMLFGPRSPQQPLRQRQVQSQAIGLEPPSDESIATLMALGFDREHVMRALQASSNNVDIAANRLL 290          
BLAST of mRNA_P-wetherbeei_contig689.1.1 vs. uniprot
Match: W4GRN1_9STRA (UBA domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GRN1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.690e-16
Identity = 91/335 (27.16%), Postives = 134/335 (40.00%), Query Frame = 3
Query:   66 PVCKAVFLTSLLATSAALARGQDPSVNL-LHVLSRRDPWWRVLPALSCYGGVLDLLSGLQLTHAVRVVEREMGSGKFGAFLFLVATLALSLEAALSVRWPGLRLAPGPLPLLAAALTFYFGYV--PAYGATLL----RLPPSFTCGTGKITVGMAAAFLFLR----GALSTAVPAAAGILAAVLYATDALPLKQFRLPRPVRRLFGLLHPLLRSDDP---RDVRRRVMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAIETLQGLGFDREAAIRALQATDNNVEAAANRLL 1028
            PV  A    + +A++AAL    +  + L +  ++    +WR+L         + +  G+ +    RV+ER+ GS KFG  + LV   + +L+  L  +WP     PGP PL+ A    YF  +  P    T L    +L P      G      A+ +  L      + +TA P A G+L  +LY + ALPL + RLP  +   F   HP+     P   +  R+R ++                                                                      E+AI  L GLGF+R+ AI ALQA+DNNVEAAANRLL
Sbjct:   32 PVTYAYLSATGMASAAALFMDMEHQLTLDVSKIANLSQYWRLLTCHFALDNGIAVAFGMYVLFQFRVIERQFGSNKFGTLVLLVLLTSTALQVWL--KWPT---TPGPYPLIGALFVIYFSTILQPIKTDTDLGNVPQLQPRLYSLLGLHVSDKASTYGLLSVVCLRSYATAFPFATGVLVGLLYQSKALPLSKLRLPGFLVWFFEWFHPIFMVVPPSVLQQQRQRQILDAQRRQAAAMGGHPPQEGVGHGFRDQLLPGNGHVPFQHRTPPS---------------------------EDAINQLTGLGFERDQAIAALQASDNNVEAAANRLL 334          
BLAST of mRNA_P-wetherbeei_contig689.1.1 vs. uniprot
Match: V9F720_PHYPR (UBA domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9F720_PHYPR)

HSP 1 Score: 88.2 bits (217), Expect = 5.300e-16
Identity = 100/334 (29.94%), Postives = 141/334 (42.22%), Query Frame = 3
Query:   51 GFLHAPVCKAVFLTSLLATSAALA--RGQDPSVNLLHVLSRRDPWWRVLPALSCYGGVLDLLSGLQLTHAVRVVEREMGSGKFGAFLFLVATL--ALSLEAALSVRWPGLRLAPGPLPLLAAALTFYFGYVPAYGATLLRLPPSFTCG----TGKITVGMAAAFLFLRGALSTAVPAAAGILAAVLYATDALPLKQFRLPRPVRRLFGLLHPLLRSDDPRDVRRRVMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAIETLQGLGFDREAAIRALQATDNNVEAAANRLL 1028
            GF  APV  A  L    A+SA+L   RG+  +++   +LSR   +WR++ +   +   L +  GL      RV+ER++GS KFG+ L  V  +  AL L A  S  W    +  GP P++ A   ++  ++P         P SF+      + K +  M    LF+R      +P   G    +L+++   PL + RLP  V  +F LLHPL       DV   V                                                         XXXX           E+AI+ L  LGFDRE A++ALQ+TDNNVEAAANRLL
Sbjct:   25 GFYGAPVTYAFSLAVGAASSASLLLDRGRLLALDRDAILSRSQ-YWRLISSQLTFHHGLAVSLGLYAVFQFRVLERQLGSRKFGSILVFVLLISGALQLAALTSAPWLTKTIPGGPYPVIGAFAVYFNKFIPKLH------PRSFSVWGLHFSDKSSTYMLMLVLFVRD-FHALIPFFGGSFLGLLFSSS--PLGRLRLPSFVCSIFSLLHPLF------DV---VPSSTLALQRQRRALEAQRRVNARFNRGRPAAPAVQGQGFRDQLLPGAGGMMPGGAPAXXXXLPPHMAAQPPSEDAIQQLMALGFDRERALQALQSTDNNVEAAANRLL 339          
BLAST of mRNA_P-wetherbeei_contig689.1.1 vs. uniprot
Match: D0NK77_PHYIT (UBA domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=D0NK77_PHYIT)

HSP 1 Score: 87.0 bits (214), Expect = 1.090e-15
Identity = 93/334 (27.84%), Postives = 134/334 (40.12%), Query Frame = 3
Query:   51 GFLHAPVCKAVFLTSLLATSAALA--RGQDPSVNLLHVLSRRDPWWRVLPALSCYGGVLDLLSGLQLTHAVRVVEREMGSGKFGAFLFLVATL--ALSLEAALSVRWPGLRLAPGPLPLLAAALTFYFGYVPAYGATLLRLPPSFTCG----TGKITVGMAAAFLFLRGALSTAVPAAAGILAAVLYATDALPLKQFRLPRPVRRLFGLLHPLLRSDDPRDVRRRVMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAIETLQGLGFDREAAIRALQATDNNVEAAANRLL 1028
            GF  APV  A  L    A+SA+L   RG   +++   +LSR   +WR++ +   +   L +  GL      RV+ER++GS KFG+ L  V  +  AL L A  S  W    +  GP P++ A   ++  ++P         P SF+      + K +  M    LF+R      +P   G    +L+ +   PL + +LP  V  + GLLHPL           +V+                                                                       E+AI+ L  LGFDRE A++ALQ TDNNVEAAANRLL
Sbjct:    7 GFYGAPVTYAFSLAVGAASSASLLLDRGHLLALDRDAILSRSQ-YWRLISSQLTFHHGLAVSLGLYTVFQFRVLERQLGSRKFGSILVFVLLISGALQLAALTSSPWLAKTIPGGPYPIIGAFAVYFNKFIPKLH------PRSFSVWGLHFSDKSSTYMLMLVLFVRD-FRALIPFMGGSFLGLLFRST--PLGRLQLPSFVCSILGLLHPLF----------KVVPASTLALQRQRRALEAQRRVNARFNRRPGAPAVQGQGFRDQLLPGAGGAMPGGAPAAGGMLLPHMAAQPPSEDAIQQLMALGFDRERALQALQTTDNNVEAAANRLL 320          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig689.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6R3_9PHAE1.720e-3129.64UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LPP7_ECTSI2.310e-2534.78Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6G0XD48_9STRA4.520e-2228.36UBA domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A1W0A914_9STRA3.130e-1927.41UBA domain-containing protein n=1 Tax=Thraustothec... [more]
A0A024UD62_9STRA4.300e-1927.88UBA domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A2D4C2S4_PYTIN7.520e-1929.64UBA domain-containing protein n=1 Tax=Pythium insi... [more]
A0A6V1Q7N2_HETAK1.680e-1725.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W4GRN1_9STRA2.690e-1627.16UBA domain-containing protein n=5 Tax=Aphanomyces ... [more]
V9F720_PHYPR5.300e-1629.94UBA domain-containing protein n=8 Tax=Phytophthora... [more]
D0NK77_PHYIT1.090e-1527.84UBA domain-containing protein n=3 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig689contigP-wetherbeei_contig689:589..1783 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog157072.XP_008867160.1
Preferred nameUBAC2
PFAMsDUF1751,Rhomboid,UBA
Model size1037
Max annot lvl2759|Eukaryota
KEGG koko:K01365
KEGG Pathwayko04140,ko04142,ko04145,ko04210,ko04612,ko05205,ko05323,ko05418,map04140,map04142,map04145,map04210,map04612,map05205,map05323,map05418
Hectar predicted targeting categorysignal peptide
GOsGO:0000139,GO:0000151,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0006355,GO:0006357,GO:0006508,GO:0006807,GO:0006950,GO:0006984,GO:0006991,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010559,GO:0010604,GO:0010605,GO:0010628,GO:0012505,GO:0016020,GO:0016021,GO:0016485,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0023052,GO:0030162,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031399,GO:0031625,GO:0031984,GO:0032182,GO:0032268,GO:0032269,GO:0032386,GO:0032387,GO:0032879,GO:0032880,GO:0032933,GO:0032991,GO:0033036,GO:0033157,GO:0033365,GO:0033554,GO:0034613,GO:0035103,GO:0042176,GO:0042177,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044695,GO:0045861,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051223,GO:0051224,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051604,GO:0051641,GO:0051716,GO:0060049,GO:0060255,GO:0060341,GO:0061136,GO:0065007,GO:0070201,GO:0070727,GO:0070861,GO:0070862,GO:0070972,GO:0071501,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090317,GO:0098588,GO:0098791,GO:0098796,GO:1900037,GO:1900039,GO:1901564,GO:1901799,GO:1902494,GO:1902680,GO:1903018,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903506,GO:1903508,GO:1903573,GO:1903827,GO:1903828,GO:1904152,GO:1904153,GO:1904292,GO:1904293,GO:1904950,GO:1905897,GO:1990234,GO:2000112,GO:2001141
Exons2
Evalue4.52e-20
EggNOG OGsKOG4463@1|root,KOG4463@2759|Eukaryota
Ec32 ortholog descriptionPeptidase S54, rhomboid domain
Ec32 orthologEc-18_001990.1
EC3.4.22.15
DescriptionUbiquitin-associated domain-containing protein
Cds size1011
COG categoryS
BRITEko00000,ko00001,ko00537,ko01000,ko01002,ko03110
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186943.726108-UTR-P-wetherbeei_contig689:588..6141683186943.726108-UTR-P-wetherbeei_contig689:588..614Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig689 589..614 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186943.7367609-CDS-P-wetherbeei_contig689:614..6451683186943.7367609-CDS-P-wetherbeei_contig689:614..645Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig689 615..645 +
1683186943.7525797-CDS-P-wetherbeei_contig689:803..17831683186943.7525797-CDS-P-wetherbeei_contig689:803..1783Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig689 804..1783 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig689.1.1prot_P-wetherbeei_contig689.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig689 615..1783 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig689.1.1

>prot_P-wetherbeei_contig689.1.1 ID=prot_P-wetherbeei_contig689.1.1|Name=mRNA_P-wetherbeei_contig689.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=337bp
MALTDPPHGFLHAPVCKAVFLTSLLATSAALARGQDPSVNLLHVLSRRDP
WWRVLPALSCYGGVLDLLSGLQLTHAVRVVEREMGSGKFGAFLFLVATLA
LSLEAALSVRWPGLRLAPGPLPLLAAALTFYFGYVPAYGATLLRLPPSFT
CGTGKITVGMAAAFLFLRGALSTAVPAAAGILAAVLYATDALPLKQFRLP
RPVRRLFGLLHPLLRSDDPRDVRRRVMMERQRREILRAAARGQGGGLGAA
AGGGERLLPAGGGGGFSWGGSGGGGGGQGLRRRAVAPAPPPPPPPPPPEE
AIETLQGLGFDREAAIRALQATDNNVEAAANRLLGH*
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mRNA from alignment at P-wetherbeei_contig689:589..1783+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig689.1.1 ID=mRNA_P-wetherbeei_contig689.1.1|Name=mRNA_P-wetherbeei_contig689.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1195bp|location=Sequence derived from alignment at P-wetherbeei_contig689:589..1783+ (Phaeothamnion wetherbeei SAG_119_79)
AATTGCAGAAACACGCAACGGAAGGGATGGCGCTGACCGATCCACCGCAC GGCTTCCGTGAGTCGCAGTTCATGACTTGCATCCCCTTTTCTCATTCCTT CTTCGGCTTTCTTTTAAGTTTTCGAAGTCTCGTTCGCCAAAGAGAGCGTG CCAGACGCTGCTTTGCGTCTCTCACCATCCACAAGCATCCCTTTCTCCAA CCTCTCTTTCCGCAGTGCACGCGCCGGTATGCAAGGCTGTCTTTCTGACG TCGCTGTTGGCGACTTCGGCTGCACTCGCCCGAGGGCAGGACCCGTCCGT CAACCTGCTGCACGTTCTTTCCCGGCGAGACCCGTGGTGGCGAGTGCTGC CGGCGTTAAGCTGCTATGGCGGCGTACTCGACCTTCTCAGCGGCCTGCAG CTCACGCACGCCGTGCGCGTCGTGGAGCGCGAGATGGGCTCCGGAAAATT CGGCGCCTTTTTGTTCCTCGTCGCGACGCTGGCGCTCTCGTTGGAGGCGG CGCTGAGCGTCCGATGGCCGGGTCTCCGCCTGGCCCCGGGCCCGCTGCCC CTGCTGGCCGCGGCGCTCACCTTTTATTTTGGCTACGTGCCCGCCTACGG CGCGACGCTGCTGCGGCTGCCGCCGAGCTTCACTTGCGGCACGGGCAAGA TCACCGTCGGCATGGCCGCCGCCTTCCTCTTCCTGAGGGGCGCCCTGTCG ACAGCAGTCCCGGCCGCCGCTGGCATACTCGCTGCCGTGCTCTACGCGAC GGATGCCCTCCCACTGAAGCAGTTCCGGCTGCCGCGACCTGTCCGGCGAT TATTCGGCCTCCTGCACCCGCTGCTGCGGTCCGATGACCCCCGGGACGTG CGGCGGCGGGTCATGATGGAGCGGCAGCGGCGGGAGATCCTCAGGGCAGC GGCGCGGGGTCAGGGCGGCGGGCTGGGCGCCGCCGCGGGGGGAGGGGAGC GGCTCTTGCCGGCGGGCGGCGGCGGCGGCTTCTCTTGGGGCGGCAGCGGC GGCGGGGGCGGTGGGCAGGGGCTTCGTCGGCGGGCAGTGGCGCCGGCCCC GCCGCCGCCGCCGCCGCCGCCGCCGCCAGAGGAGGCGATCGAGACGCTGC AGGGGCTGGGGTTTGACCGGGAGGCGGCAATACGGGCGCTGCAGGCCACA GATAACAACGTCGAAGCGGCGGCGAACCGCCTCTTGGGGCACTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig689:589..1783+

>mRNA_P-wetherbeei_contig689.1.1 ID=mRNA_P-wetherbeei_contig689.1.1|Name=mRNA_P-wetherbeei_contig689.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1011bp|location=Sequence derived from alignment at P-wetherbeei_contig689:589..1783+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGCTGACCGATCCACCGCACGGCTTCCTGCACGCGCCGGTATGCAA
GGCTGTCTTTCTGACGTCGCTGTTGGCGACTTCGGCTGCACTCGCCCGAG
GGCAGGACCCGTCCGTCAACCTGCTGCACGTTCTTTCCCGGCGAGACCCG
TGGTGGCGAGTGCTGCCGGCGTTAAGCTGCTATGGCGGCGTACTCGACCT
TCTCAGCGGCCTGCAGCTCACGCACGCCGTGCGCGTCGTGGAGCGCGAGA
TGGGCTCCGGAAAATTCGGCGCCTTTTTGTTCCTCGTCGCGACGCTGGCG
CTCTCGTTGGAGGCGGCGCTGAGCGTCCGATGGCCGGGTCTCCGCCTGGC
CCCGGGCCCGCTGCCCCTGCTGGCCGCGGCGCTCACCTTTTATTTTGGCT
ACGTGCCCGCCTACGGCGCGACGCTGCTGCGGCTGCCGCCGAGCTTCACT
TGCGGCACGGGCAAGATCACCGTCGGCATGGCCGCCGCCTTCCTCTTCCT
GAGGGGCGCCCTGTCGACAGCAGTCCCGGCCGCCGCTGGCATACTCGCTG
CCGTGCTCTACGCGACGGATGCCCTCCCACTGAAGCAGTTCCGGCTGCCG
CGACCTGTCCGGCGATTATTCGGCCTCCTGCACCCGCTGCTGCGGTCCGA
TGACCCCCGGGACGTGCGGCGGCGGGTCATGATGGAGCGGCAGCGGCGGG
AGATCCTCAGGGCAGCGGCGCGGGGTCAGGGCGGCGGGCTGGGCGCCGCC
GCGGGGGGAGGGGAGCGGCTCTTGCCGGCGGGCGGCGGCGGCGGCTTCTC
TTGGGGCGGCAGCGGCGGCGGGGGCGGTGGGCAGGGGCTTCGTCGGCGGG
CAGTGGCGCCGGCCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCAGAGGAG
GCGATCGAGACGCTGCAGGGGCTGGGGTTTGACCGGGAGGCGGCAATACG
GGCGCTGCAGGCCACAGATAACAACGTCGAAGCGGCGGCGAACCGCCTCT
TGGGGCACTAG
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