mRNA_P-wetherbeei_contig6885.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6885.1.3
Unique NamemRNA_P-wetherbeei_contig6885.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig6885.1.3 vs. uniprot
Match: D7FJA6_ECTSI (Metallopeptidase Oma1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJA6_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 7.080e-29
Identity = 71/123 (57.72%), Postives = 87/123 (70.73%), Query Frame = 2 
Query:  272 SPPQAARTVRRVGRAVAAASGNIGRSFEWDFLVIRDDQTNAFVLPGGKVCVFTGLFKVCPTEDALAAVLAHEVGHAVANHFGEKLSKAFVVN-LLLLGLVLMGFQYDHLARMVTNLVNARKNS 637
            S  QA +TV R+G+ +A ASG  G +  W+F+V+RDD  NAFVLPGGKV VFTGL +V P EDALA+VL HEVGH VANH GEKLSK+F+   LLLL   + GF+Y  +AR +  LV    NS
Sbjct:  147 STHQATQTVERIGKRIAQASGLKGCT--WEFIVVRDDSMNAFVLPGGKVVVFTGLLEVTPNEDALASVLGHEVGHVVANHAGEKLSKSFLKEGLLLLLFAVTGFEYFDVARSIGGLVFDLPNS 267
[Close]
BLAST of mRNA_P-wetherbeei_contig6885.1.3 vs. uniprot
Match: A0A6H5L681_9PHAE (Peptidase_M48 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L681_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 4.480e-28
Identity = 70/120 (58.33%), Postives = 84/120 (70.00%), Query Frame = 2 
Query:  281 QAARTVRRVGRAVAAASGNIGRSFEWDFLVIRDDQTNAFVLPGGKVCVFTGLFKVCPTEDALAAVLAHEVGHAVANHFGEKLSKAFVVN-LLLLGLVLMGFQYDHLARMVTNLVNARKNS 637
            QA RTV R+G+ +A AS   G +  W+F+V+RDD  NAFVLPGGKV VFTGL  V P EDALA+VL HEVGH VANH GEKLSK F+   LLLL   + GF+Y  +AR + +LV    NS
Sbjct:  149 QATRTVERIGKRIAEASELKGCA--WEFIVVRDDNMNAFVLPGGKVVVFTGLLNVTPNEDALASVLGHEVGHVVANHAGEKLSKNFLTEGLLLLLFAVTGFEYFDVARSIGSLVFDLPNS 266
[Close]
BLAST of mRNA_P-wetherbeei_contig6885.1.3 vs. uniprot
Match: A0A067CDM3_SAPPC (Peptidase_M48 domain-containing protein (Fragment) n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CDM3_SAPPC)

HSP 1 Score: 99.0 bits (245), Expect = 1.870e-19
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 2 
Query:  287 ARTVRRVGRAVAAASGNIGRSFEWDFLVIRDDQTNAFVLPGGKVCVFTGLFKVCPTEDALAAVLAHEVGHAVANHFGEKLSKAFVVNLLLL 559
            A+ VR VG+ +AAAS      F+WDF+VI   + NAF LPGGK+CV+TGLFK+   +D+LAAVL+HEV HA+A H  E+LS   + +L LL
Sbjct:   76 AKMVRAVGQRIAAASNRT--DFKWDFVVIESPEPNAFCLPGGKICVYTGLFKLLRNQDSLAAVLSHEVAHALARHSAEQLSVGNLFSLFLL 164
[Close]
BLAST of mRNA_P-wetherbeei_contig6885.1.3 vs. uniprot
Match: A0A507CAU6_9FUNG (Peptidase_M48 domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CAU6_9FUNG)

HSP 1 Score: 95.5 bits (236), Expect = 2.560e-19
Identity = 45/80 (56.25%), Postives = 60/80 (75.00%), Query Frame = 1 
Query:  799 LPNSRKLESEADFIGLHITAKACYDPAAMPRVFERMSQVNGNHGGRAWEFMSTHPSDETRIAQQRAWLPEAEAVYESSSC 1038
            LP SR +ESEADFIGL + A+ACYDPAA   ++ERM +V G  GG +  ++STHPS+++RI   +AWLP+AE V E+S C
Sbjct:   64 LPFSRNIESEADFIGLQLMAQACYDPAAAIGIWERMKKVGG--GGLSIAYLSTHPSNDSRITAIKAWLPDAERVLENSDC 141
[Close]
BLAST of mRNA_P-wetherbeei_contig6885.1.3 vs. uniprot
Match: A0A6A7KM71_9PROT (M48 family metalloprotease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KM71_9PROT)

HSP 1 Score: 98.2 bits (243), Expect = 3.720e-19
Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 2 
Query:  296 VRRVGRAVAAASGNIGRSFEWDFLVIRDDQTNAFVLPGGKVCVFTGLFKVCPTEDALAAVLAHEVGHAVANHFGEKLSKAFVVNLLLLGLVLMG 577
            VRRVG+ +AA SG       W+F VI+DD  NAF LPGGKV V TGLFKV   +D LA V+AHEVGHA+A H  E++S+   + L L GL + G
Sbjct:   82 VRRVGQRIAAVSGR--PDLPWEFNVIQDDTPNAFALPGGKVGVHTGLFKVAQNDDQLATVMAHEVGHAIARHSAERVSQQMALQLGLAGLGMAG 173
[Close]
BLAST of mRNA_P-wetherbeei_contig6885.1.3 vs. uniprot
Match: A0A2D5UFS1_9BACT (Peptidase M48 family protein n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A2D5UFS1_9BACT)

HSP 1 Score: 95.5 bits (236), Expect = 2.390e-18
Identity = 46/85 (54.12%), Postives = 64/85 (75.29%), Query Frame = 2 
Query:  296 VRRVGRAVAAASGNIGRSFEWDFLVIRDDQT-NAFVLPGGKVCVFTGLFKVCPTEDALAAVLAHEVGHAVANHFGEKLSKAFVVN 547
            V+RVGR +A ASG   ++++WDF+VI+DD+T NAFVLPGGKV V+TG+  +   E  LA VL HEV HA+A H GE++S+  +V+
Sbjct:   64 VKRVGRRIARASG---KNYKWDFVVIKDDKTPNAFVLPGGKVFVYTGILPITLNEHGLATVLGHEVAHAIARHGGERVSQTLLVH 145
[Close]
BLAST of mRNA_P-wetherbeei_contig6885.1.3 vs. uniprot
Match: A0A6G0WJ80_9STRA (Peptidase_M48 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJ80_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.580e-18
Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 2 
Query:  290 RTVRRVGRAVAAASGNIGRSFEWDFLVIRDDQTNAFVLPGGKVCVFTGLFKVCPTEDALAAVLAHEVGHAVANHFGEKLSKAFVVNLLLLGLVLM 574
            R V+RVG+ +A  SG     F+W+F+VI   + NAF +PGGKVCVFTGLFK    ED LA+V+ HE+ HA+A H  E++S +    LL+LGL+ +
Sbjct:   36 RMVKRVGQRIARVSGQ--NDFKWEFVVIDSPEANAFCVPGGKVCVFTGLFKTLRHEDGLASVMGHEIAHALARHSAEQMSLSA---LLMLGLLFL 125
[Close]
BLAST of mRNA_P-wetherbeei_contig6885.1.3 vs. uniprot
Match: A8U3A9_9PROT (Peptidase M48, Ste24p n=1 Tax=alpha proteobacterium BAL199 TaxID=331869 RepID=A8U3A9_9PROT)

HSP 1 Score: 95.1 bits (235), Expect = 3.240e-18
Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 2 
Query:  278 PQAARTVRRVGRAVAAASGNIGRSFEWDFLVIRDDQTNAFVLPGGKVCVFTGLFKVCPTEDALAAVLAHEVGHAVANHFGEKLSKAFVVNLLLLGLVLMGFQYDHLARMV 607
            P+    V+ +GR VAA S   G +  W+F V  D++ NAF LPGGKV V TGLFKV  T+D LAAV+AHEVGHA+A H  E++S+  +V     G   +G QY  +A+++
Sbjct:   64 PRYTGPVQEIGRRVAAVSDQPGLA--WEFTVFEDEEPNAFALPGGKVGVNTGLFKVAKTKDQLAAVMAHEVGHAIARHSAERVSRQALVQA---GQQAIGAQYPGMAQVL 168
[Close]
BLAST of mRNA_P-wetherbeei_contig6885.1.3 vs. uniprot
Match: A0A7R9SUW0_9CHLO (Hypothetical protein n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SUW0_9CHLO)

HSP 1 Score: 96.3 bits (238), Expect = 3.270e-18
Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 2 
Query:  290 RTVRRVGRAVAAA-------SGNIG--RSFEWDFLVIRDDQTNAFVLPGGKVCVFTGLFKVCPTEDALAAVLAHEVGHAVANHFGEKLSKAFVVNLLLLGLV-LMGFQY 586
            R V RVG+ +  A        G+I   ++ +W+F VI   + NAFVLPGGKVCVFTGL ++ P+++ L+AVL HE+ H VA H  EKLS+A  +NLL L L+ ++GF +
Sbjct:   99 RFVTRVGKRIIGALDSPFSPKGDIEHLKNLDWEFTVIESPEINAFVLPGGKVCVFTGLLRMFPSDEELSAVLGHEIAHVVARHPAEKLSQALFLNLLKLALISVVGFDF 207
[Close]
BLAST of mRNA_P-wetherbeei_contig6885.1.3 vs. uniprot
Match: A0A4T0FHZ0_9BASI (Peptidase_M48 domain-containing protein n=1 Tax=Wallemia hederae TaxID=1540922 RepID=A0A4T0FHZ0_9BASI)

HSP 1 Score: 95.5 bits (236), Expect = 4.660e-18
Identity = 44/84 (52.38%), Postives = 59/84 (70.24%), Query Frame = 1 
Query:  790 ILELPNSRKLESEADFIGLHITAKACYDPAAMPRVFERMSQVNGNHGGRAWEFMSTHPSDETRIAQQRAWLPEAEAVYESSSCP 1041
            +LELPNSRK E EAD +G+ + A+AC+DP    RV++RMSQ  G  G    +F+STHP  E RI + R +LP+A+ VY+SS CP
Sbjct:  199 VLELPNSRKAEYEADRVGMDVAARACFDPEEAIRVWQRMSQAEGQAG---MDFLSTHPGHENRIEKLREFLPKAQKVYDSSECP 279
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6885.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJA6_ECTSI7.080e-2957.72Metallopeptidase Oma1 n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5L681_9PHAE4.480e-2858.33Peptidase_M48 domain-containing protein n=1 Tax=Ec... [more]
A0A067CDM3_SAPPC1.870e-1953.85Peptidase_M48 domain-containing protein (Fragment)... [more]
A0A507CAU6_9FUNG2.560e-1956.25Peptidase_M48 domain-containing protein n=1 Tax=Sy... [more]
A0A6A7KM71_9PROT3.720e-1954.26M48 family metalloprotease n=1 Tax=Alphaproteobact... [more]
A0A2D5UFS1_9BACT2.390e-1854.12Peptidase M48 family protein n=1 Tax=Nitrospinae b... [more]
A0A6G0WJ80_9STRA2.580e-1849.47Peptidase_M48 domain-containing protein n=1 Tax=Ap... [more]
A8U3A9_9PROT3.240e-1847.27Peptidase M48, Ste24p n=1 Tax=alpha proteobacteriu... [more]
A0A7R9SUW0_9CHLO3.270e-1846.79Hypothetical protein n=1 Tax=Polyblepharides amyli... [more]
A0A4T0FHZ0_9BASI4.660e-1852.38Peptidase_M48 domain-containing protein n=1 Tax=Wa... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6885contigP-wetherbeei_contig6885:231..3175 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FJA6
Preferred nameOMA1
PFAMsPeptidase_M48
Model size1794
Max annot lvl2759|Eukaryota
KEGG koko:K09500
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006508,GO:0006515,GO:0006807,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016043,GO:0016787,GO:0019538,GO:0019866,GO:0023052,GO:0030163,GO:0031090,GO:0031929,GO:0031966,GO:0031967,GO:0031975,GO:0035556,GO:0035694,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051603,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1901565,GO:1901575
Exons4
Evalue3.39e-32
EggNOG OGsCOG0501@1|root,KOG2661@2759|Eukaryota
Descriptionnegative regulation of mitochondrial fusion
Cds size768
COG categoryO
BRITEko00000,ko03036,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6885.1.3prot_P-wetherbeei_contig6885.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6885 379..2297 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186943.3635466-UTR-P-wetherbeei_contig6885:230..3781683186943.3635466-UTR-P-wetherbeei_contig6885:230..378Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6885 231..378 +
1683186943.4117303-UTR-P-wetherbeei_contig6885:2297..31751683186943.4117303-UTR-P-wetherbeei_contig6885:2297..3175Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6885 2298..3175 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186943.3727326-CDS-P-wetherbeei_contig6885:378..6451683186943.3727326-CDS-P-wetherbeei_contig6885:378..645Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6885 379..645 +
1683186943.3805027-CDS-P-wetherbeei_contig6885:1023..11911683186943.3805027-CDS-P-wetherbeei_contig6885:1023..1191Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6885 1024..1191 +
1683186943.3939052-CDS-P-wetherbeei_contig6885:1596..19041683186943.3939052-CDS-P-wetherbeei_contig6885:1596..1904Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6885 1597..1904 +
1683186943.4028347-CDS-P-wetherbeei_contig6885:2272..22971683186943.4028347-CDS-P-wetherbeei_contig6885:2272..2297Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6885 2273..2297 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6885.1.3

>prot_P-wetherbeei_contig6885.1.3 ID=prot_P-wetherbeei_contig6885.1.3|Name=mRNA_P-wetherbeei_contig6885.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp
MPFQNGLHTHVFSQSFSLYMPLLLLQAGPLGSFLVLFQLFRSPPQAARTV
RRVGRAVAAASGNIGRSFEWDFLVIRDDQTNAFVLPGGKVCVFTGLFKVC
PTEDALAAVLAHEVGHAVANHFGEKLSKAFVVNLLLLGLVLMGFQYDHLA
RMVTNLVNARKNSLSRLLISAVDGCVDSACLTNMVDALLTFLRRSWSVLI
SLLPSFLSYFSFLRFWSCPIRASSSRRRTSSASTSPPRPATTPRRCLGCS
SGCRR*
back to top

mRNA from alignment at P-wetherbeei_contig6885:231..3175+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6885.1.3 ID=mRNA_P-wetherbeei_contig6885.1.3|Name=mRNA_P-wetherbeei_contig6885.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2945bp|location=Sequence derived from alignment at P-wetherbeei_contig6885:231..3175+ (Phaeothamnion wetherbeei SAG_119_79)
GAACACGAGAGTACGGAGCGGCGACGTTTCAGCAAATCAAAGAGCAATAT
GCTGGGCGCATCCTCCCGGATTCGCACCCCGTTAGTGGTGTGGGGAATGA
TGATTTCAAGAGAGCCGAATCTTGGGTCTTAGGCAGGAGGCTTTGACTAT
GCCTTTTCAAAATGGTTTGCACACCCATGTCTTCTCTCAGTCTTTCTCTC
TCTACATGCCGTTATTATTGCTGCAGGCCGGTCCCTTGGGCTCTTTCCTC
GTTTTATTTCAACTCTTCCGCTCCCCCCCGCAGGCGGCACGGACGGTGCG
AAGGGTGGGGCGCGCGGTGGCAGCAGCCAGCGGCAACATTGGGCGGAGTT
TCGAATGGGATTTTCTGGTTATCCGGGACGATCAAACCAATGCCTTCGTG
TTGCCGGGAGGAAAGGTGAGGGAGAAAAGAACCGGGTTGTGTTTGCGCCT
TCAGCGGAGCCGCTCCACATCTTTGCCTGTTGCTTCCAGCTACTTGCGCA
AGCCGGCCTCGTTATTTTGAGCTTTGAACCGCCGTAGGGGCCGCCACGGT
GGCCATCATCAATTCTGCCCCCACCACATTCCTTGCCGCCTCCACCATCT
TTATTGCCGCCATTACCGCCGCCACCGCCGCCATCATCAATGCCGCCATC
GTGCCGTCTCGTTGGCCGGAACGCCCGGAACAAACTGGAACTAACTGATA
AAGCGGGAGCGAACGTGAAACCAACCTGAACGAACCCGAAACCACCATCG
GGACGAAACCGTGGGAACCAAACCACGAAACAAATAAAAACAGGTATGCG
TCTTCACGGGGCTGTTCAAGGTGTGCCCGACGGAGGACGCGCTGGCGGCG
GTACTGGCGCACGAGGTGGGGCACGCCGTGGCCAACCACTTCGGGGAGAA
GCTCTCGAAGGCGTTTGTCGTCAACCTCCTCCTGCTTGGGCTCGTTCTCA
TGGGCTTCCAGGTGGGTCTGTTAGGGTGGTCGAAGTTCTTGAGCTGCGCA
TAAGCTTCAACTGCTTCATAGAAAGAGATGGTTCCAGACGGACGGTTGTT
TTGCGTTCTAGTTATTTCCTTATTTCATGTTCAGCTTTCGCCCACCGCGG
CGTCTTCCCGATAGTCAACTACCAGGCGGGTGGCGAGGGTGGGGTACGTT
CTTGCTATCCTTGTGTTGACTCTGGCAATCGGGCTTGAGCAGGTGGCGTC
GAGGCGGCTTTGCAAATCGGCTCGTTCCTGCTGTCAGAGTTTTTGCTGCC
GCTCTGCCTTCGCTCTTTCTTTCCCTTTCATCTCCTTTTACGCGCAATGG
TCAACTTCTTCTCTCACTCTACAGTTTCTTTTCTGTGTACCTCCTCTCCT
TTCTTCTGTCTTGCAGTACGACCACCTAGCGCGCATGGTGACCAACCTGG
TGAACGCCCGTAAAAACTCACTGTCTAGGCTGTTAATTTCCGCCGTTGAC
GGCTGTGTGGACAGCGCGTGTCTCACTAATATGGTCGATGCCCTTCTTAC
ATTCTTGCGTAGATCCTGGTCTGTTCTTATTTCTCTTCTTCCTTCCTTTC
TTTCTTATTTCTCTTTTCTTAGATTTTGGAGCTGCCCAATTCGCGCAAGC
TCGAGTCGGAGGCGGACTTCATCGGCCTCCACATCACCGCCAAGGCCTGC
TACGACCCCGCGGCGATGCCTCGGGTGAGTCTTTTTTCCGATGCACGGTT
TGAAAGGGAAAAGACACTTTACACTGCTCTCTCCCCCAAGTTCAACCCAG
GCTGTCAGCAATCGATCCTGATTGGCACCAGTCAGAAGAGCGCGCAAAGG
AGCGCATGAAGAAGTGCTTCAGAAGGCCGCTCAACGATGGCCTCACCCCT
TTCCTGTTTTGGACCGTCCCGAATCGACCTGTCTGTGATTGCCAGAATAA
TTTATGTCCTACAACCTGATCTCCCCACCGCCGTCCCCTGCCCCTCTATC
TTCTTCCAAATACACCGCTGCTCCTCTCTCCAAACACACCGTGCTGCCCC
GCCTCGTTTCCCTTGCCCTGCCATTCTTCCATCGCCTCTCAGGTGTTCGA
GCGGATGTCGCAGGTGAACGGCAACCATGGCGGCCGCGCCTGGGAGTTCA
TGTCGACGCACCCCAGCGACGAAACGCGCATCGCCCAGCAGCGGGCATGG
CTGCCCGAGGCAGAGGCCGTCTACGAGTCCAGCAGTTGTCCAGCCGCCAT
CCGGGATGGGCTCTGGGCGCGGTCACCGTAATCCTCACGTGGATGCGACG
CGGCGGCGACAGACGGGCAAGGCGGCGGCGGCAGTGGGGTGACGGCGACA
GCGGCGACGGTAGGCGGGCCAGGCGATGGTGGGCTGGCGGTGGCTGGCAG
GCAGTACGGTAGCCGACAGGGCTGCAGCAGGCACGCGGTCGAGCCATCGT
CCTGGTGGCACGGCACCGCACGGCGTACCGCTCTTCACTCGCGAGACAAG
GCGGCGGAGGATCTCTGACGGGCGCGGTCGCGGCGGCGGGGTCTGCGGAC
AACGAGGGATGCCTTTCCAGGTCCGGAAGCAGACCCTTTTGGTACGGCTG
CTGGTTATGTCACGGCCTCGGCCGAACCGGTGCCTCCATGCGGGCCGCTG
TGAGCCGCCACAGGAAAGAACTGCAACGGCGGCGACAACGGTGGCGAGAG
GCGGTTGCGGCTGCGACTGCAGGGGCGCGGGATACTGATGTGGATGACGC
CTTAGTAAATGTGTCTTGTGTGTCGCGTGAGAATGCAAGATGTCTTTTCT
CTGTTGCTGCCGCCAGAGGCGCACGAGAAGGCAATGGCGCGGCTGAGCGT
GCGGGCCGATCTTGTTGTGAGAAGAGCTGTCTTTTTGTACGACCGGGTTT
TTCATTGCCACGCGGAAATGAGACGGGAGGGGTCCACACGACGATCACAG
AGTTATGTAGAATATTGTAAATTATAGAGGGGAATCAAAAACAGT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6885:231..3175+

>mRNA_P-wetherbeei_contig6885.1.3 ID=mRNA_P-wetherbeei_contig6885.1.3|Name=mRNA_P-wetherbeei_contig6885.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig6885:231..3175+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTTTTCAAAATGGTTTGCACACCCATGTCTTCTCTCAGTCTTTCTC
TCTCTACATGCCGTTATTATTGCTGCAGGCCGGTCCCTTGGGCTCTTTCC
TCGTTTTATTTCAACTCTTCCGCTCCCCCCCGCAGGCGGCACGGACGGTG
CGAAGGGTGGGGCGCGCGGTGGCAGCAGCCAGCGGCAACATTGGGCGGAG
TTTCGAATGGGATTTTCTGGTTATCCGGGACGATCAAACCAATGCCTTCG
TGTTGCCGGGAGGAAAGGTATGCGTCTTCACGGGGCTGTTCAAGGTGTGC
CCGACGGAGGACGCGCTGGCGGCGGTACTGGCGCACGAGGTGGGGCACGC
CGTGGCCAACCACTTCGGGGAGAAGCTCTCGAAGGCGTTTGTCGTCAACC
TCCTCCTGCTTGGGCTCGTTCTCATGGGCTTCCAGTACGACCACCTAGCG
CGCATGGTGACCAACCTGGTGAACGCCCGTAAAAACTCACTGTCTAGGCT
GTTAATTTCCGCCGTTGACGGCTGTGTGGACAGCGCGTGTCTCACTAATA
TGGTCGATGCCCTTCTTACATTCTTGCGTAGATCCTGGTCTGTTCTTATT
TCTCTTCTTCCTTCCTTTCTTTCTTATTTCTCTTTTCTTAGATTTTGGAG
CTGCCCAATTCGCGCAAGCTCGAGTCGGAGGCGGACTTCATCGGCCTCCA
CATCACCGCCAAGGCCTGCTACGACCCCGCGGCGATGCCTCGGGTGTTCG
AGCGGATGTCGCAGGTGA
back to top