mRNA_P-wetherbeei_contig6864.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6864.1.2
Unique NamemRNA_P-wetherbeei_contig6864.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6864.1.2 vs. uniprot
Match: A0A835Z2G2_9STRA (DUF547 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2G2_9STRA)

HSP 1 Score: 250 bits (639), Expect = 7.930e-78
Identity = 130/269 (48.33%), Postives = 176/269 (65.43%), Query Frame = 1
Query:   25 PWQLVEELLRQALALRDEGGGGMGGTERLVSFLDGTTRLRMVSLEGLTHHEQARRXXXXXXXLALVLNLYHLMICHAYFVLGPPSSPLRWASYFCNVSYECGGDVFSLAELEHCIIRACMTPPRQFLSKFVVPTAEYSFALRRPEPRTNFVLNCGSVSGVPGVIVFRPDAVDAQLDQMSAYYLRETVEVNLAKKVVTLPKMLSWYTNDFGSGPADVLRAVAQHADRRTGQALGTMLSATDGSTVTVRYRGFNWRCRRIELLDDEELTGL 831
            P Q V +LLR+ + L+ +G    GG+  LV FLDGT +LR + L G     +          LAL LNLYH+++ HA+ ++GPP S L+ ASYF ++SYE  GDV SLAELEH +IRA ++ PRQ LSKF +P+  Y+FAL  PEPR +F LNCGS SGV G+ V+R   VD QLD MSAY+L  TVEV  A+  VTLP++L+W+  DFG  P D LRA+ ++       AL  +L+A D + +T+++  F+WRCR +EL+  EEL  L
Sbjct:   38 PEQFVSDLLRRVMKLQADGVLEGGGSAALVEFLDGTAQLRWLDLSGPGDPSER---------LALFLNLYHVLLMHAHLLVGPPGSALKAASYFNSLSYEVAGDVLSLAELEHGVIRAPLSAPRQCLSKFFLPSERYAFALTAPEPRVSFALNCGSESGVRGIAVYRGADVDRQLDLMSAYFLAATVEVAPARLAVTLPRVLAWFQADFGRTPLDALRAILKYMTGTKYNALVALLAAADTTPITIKHSHFSWRCRTLELVSTEELRAL 297          
BLAST of mRNA_P-wetherbeei_contig6864.1.2 vs. uniprot
Match: A0A6H5KCR6_9PHAE (DUF547 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR6_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 3.630e-71
Identity = 134/302 (44.37%), Postives = 180/302 (59.60%), Query Frame = 1
Query:    1 DGRGAGVRPWQLVEELLRQALALRDEGGGGMGGTERLVSFLDGTTRLRMVSLEGLTHHEQARRXXXXXXXLALVLNLYHLMICHAYFVLGPPSSPLRWASYFCNVSYECGGDVFSLAELEHCIIRACMTPPRQFLSKFVVPTAEYSFALRRPEPRTNFVLNCGSVSGVPGVIVFRPDAVDAQLDQMSAYYLRETVEVNLAKKVVTLPKMLSWYTNDFGSGPAD-------------------------VLRAVAQHADRRTGQALGTMLSATDGSTVTVRYRGFNWRCRRIELLDDEELTGL 831
            D  G G +    V  LL QAL L D+       TE+L++FLD   RLR + LEGL+H+EQ          LA+ LNLYH+M+ HA+F+LGPP SPLR ASYF  + YE GGDV S+A+LEHC++RA  + P QFLSK ++PT EY F+LRR EPR +F LNCGSVSGVPG++++RP  V  QL+  S YY++ T EV   K+ V LPK++ WY++DF +   D                          L  V ++      + +  +LS  DG +VTV++ G+NWRCR   L+ D EL  L
Sbjct: 1359 DQGGVGGQVCDFVSGLLSQALDLNDDSK-----TEQLITFLDDICRLRWMPLEGLSHNEQ----------LAVFLNLYHVMLLHAFFILGPPGSPLRVASYFTTLCYEVGGDVMSMADLEHCVLRAKTSQPNQFLSKLIIPTTEYPFSLRRAEPRVSFALNCGSVSGVPGILIYRPGDVHQQLEDASTYYVQTTTEVLFGKRTVVLPKIVHWYSDDFNNKEKDPSSXXXXXXXXXXXXXXTSPSPSLGCLLHVKRYLTGEKRRQVEALLS--DGGSVTVKFGGWNWRCRPFTLVADSELESL 1643          
BLAST of mRNA_P-wetherbeei_contig6864.1.2 vs. uniprot
Match: A0A7R9Y7X5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7X5_9STRA)

HSP 1 Score: 211 bits (536), Expect = 9.130e-63
Identity = 110/245 (44.90%), Postives = 147/245 (60.00%), Query Frame = 1
Query:  100 TERLVSFLDGTTRLRMVSLEGLTHHEQARRXXXXXXXLALVLNLYHLMICHAYFVLGPPSSPLRWASYFCNVSYECGGDVFSLAELEHCIIRACMTPPRQFLSKFVVPTAEYSFALRRPEPRTNFVLNCGSVSGVPGVIVFRPDAVDAQLDQMSAYYLRETVEVNLAKKVVTLPKMLSWYTNDFGSGPA-DVLRAVAQHADRRTGQALGTMLSATDGSTVTVRYRGFNWRCRRIELLDDEELTGL 831
            T+ L  FLDG + L  + L+ L+H E+          +   +N YHL++ HAY VLGPP    +WA YF  ++YECG D+FSLAELEH IIRA M  P QFLSK V+PT+ Y +AL  PE R NFVLNCGS S  P V + + ++   QL  M  Y+L+ETVEV+L K  VTLP++  WY +DFG+G   D LR VA          L  ML       ++V++  F W CRR++LL  +++  L
Sbjct:   33 TQLLTEFLDGVSCLAKLDLQVLSHLEK----------VCFFVNTYHLLLMHAYLVLGPPRQAAKWARYFNAIAYECGDDIFSLAELEHNIIRAPMAAPSQFLSKLVLPTSVYKYALTEPEMRINFVLNCGSYSMPPCVCILQRESTSDQLSFMCRYFLQETVEVDLKKYCVTLPRICQWYHSDFGTGTTEDCLRLVATFLINHKKDTLERMLRQLPDKLISVKFHPFRWGCRRLQLLRTDKIEAL 267          
BLAST of mRNA_P-wetherbeei_contig6864.1.2 vs. uniprot
Match: D8LMK0_ECTSI (DUF547 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK0_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 4.260e-58
Identity = 111/214 (51.87%), Postives = 142/214 (66.36%), Query Frame = 1
Query:    1 DGRGAGVRPWQLVEELLRQALALRDEGGGGMGGTERLVSFLDGTTRLRMVSLEGLTHHEQARRXXXXXXXLALVLNLYHLMICHAYFVLGPPSSPLRWASYFCNVSYECGGDVFSLAELEHCIIRACMTPPRQFLSKFVVPTAEYSFALRRPEPRTNFVLNCGSVSGVPGVIVFRPDAVDAQLDQMSAYYLRETVEVNLAKKVV---TLPKMLS 633
            D  G G +    V  LLRQAL L D+       TE+L++FLD   RLR + LEGL+H EQ          LA+ LNLYH+M+ HA+F+LGPP SPLR ASYF  + YE GGDV S+A+LEHC++RA  + P QFLSK ++PT EY F LRR EPR +F LNCGSVSGVPG++++RP  V  QL+  SAYY++ T EV   + V    TLP ++S
Sbjct: 1452 DQGGVGGQVCDFVSGLLRQALDLNDDSK-----TEQLINFLDDICRLRWMPLEGLSHSEQ----------LAVFLNLYHVMLLHAFFILGPPGSPLRVASYFTTLCYEVGGDVMSMADLEHCVMRAKTSQPNQFLSKLIIPTTEYPFCLRRAEPRVSFALNCGSVSGVPGILIYRPGDVHQQLEDASAYYVQTTTEVAAMRPVFHPQTLPALVS 1650          
BLAST of mRNA_P-wetherbeei_contig6864.1.2 vs. uniprot
Match: A0A836CH08_9STRA (DUF547 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH08_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.650e-56
Identity = 121/289 (41.87%), Postives = 165/289 (57.09%), Query Frame = 1
Query:   37 VEELLRQALALRDEG----------GG-----------GMGGTER-----LVSFLDGTTRLRMVSLEGLTHHEQARRXXXXXXXLALVLNLYHLMICHAYFVLGPPSSPLRWASYFCNVSYECGGDVFSLAELEHCIIRACMTPPRQFLSKFVVPTAEYSFALRRPEPRTNFVLNCGSVSGVPGVIVF---RPDAVDAQLDQMSAYYLRETVEVNLAKKVVTLPKMLSWYTNDFGSGPADVLRAVAQHADRRTGQALGTMLSATDGSTVTVRYRGFNWRCRRIELLDDE 816
            V  LLR+AL LR +G          GG           G GG  +     LV FLD T  L+ V L      E+          LAL LNLYHLM+ HAY ++GPP   ++W +YF  +SYE   DV SLAELEH ++RA +TPP+QF++K V+P+  Y FAL  PEPR +F L+CGS S + G++V+   + + V  QLD  SA  L+  VEV  A   VTLP++L W+  DFG  P DVLR ++ +       AL  ML+A D + + ++Y  F+++CRR+ELL  E
Sbjct: 1151 VRALLRRALRLRVDGVLDGTSSVTAGGXXXXXXXXXXHGAGGHTKAAVAALVDFLDATVALKWVELPAAD--EELSAGGDGSERLALFLNLYHLMVLHAYLLVGPPGGAIKWPAYFNGLSYEFAHDVLSLAELEHKVLRAPLTPPQQFMAKLVIPSEGYRFALTVPEPRISFALSCGSDSALRGILVYGSSKGEGVSQQLDTASAVLLQAAVEV--APPRVTLPRVLQWFQADFGRTPVDVLRVISWYLSGSKRTALAAMLAAADTAPIAIKYHPFSYKCRRLELLRQE 1435          
BLAST of mRNA_P-wetherbeei_contig6864.1.2 vs. uniprot
Match: A0A061RNH2_9CHLO (PH domain-containing protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RNH2_9CHLO)

HSP 1 Score: 186 bits (471), Expect = 1.210e-48
Identity = 110/289 (38.06%), Postives = 158/289 (54.67%), Query Frame = 1
Query:    1 DGRGAGVRPWQLVEELLRQALALRDEGGGGMGGTERLVSFLDGTTRLRMVSLEGLTHHEQARRXXXXXXXLALVLNLYHLMICHAYFVLGPPSSPLRWASYFCNVSYECGGDVFSLAELEHCIIRACMTPPR-----QFLSKFVVPTAEYSFALRRPEPRTNFVLNCGSVSGVPGVIVFRPDAVDAQLDQMSAYYLRETVEVNLAKK--VVTLPKMLSWYTNDFGSGPADVLRAVAQHADRRTGQALGTMLSATDGS--------------TVTVRYRGFNWRCRRIEL 804
             G G    P + VE  L   L      G G    E+L+ FLD    L++V  + L    QA+R        A  +N+YHLMI HA  VLGPP++P +W SYF  V+Y+   DVFSL+ELEHCI+RA M  P      Q +SK ++PT++YSFAL + + R NFVLNCGS+S +P V ++R + ++ Q D+    YL ETV ++   K  V+ LPK+  WY +DFG+   D  RA+ +      G+ L  ++  + G                VTVRY  +++ CR++ L
Sbjct:  626 SGPGPRADPCEAVERALH--LCSEFLSGSGQKQEEKLIQFLDAAASLKIVRADELP---QAQRW-------AFFVNVYHLMIMHAQVVLGPPTTPFQWLSYFNTVAYQIADDVFSLSELEHCILRAGMARPNPPTSAQLISKLMLPTSKYSFALNQGDFRLNFVLNCGSLSNLPTVPIYRAETLNEQFDETCKRYLSETVSISPKGKTAVLLLPKVCQWYLSDFGT-TLDCARAIVRFLPEEQGRLLRGLMGGSPGDLVRMMDQGWMLKEGNVTVRYLPYDFHCRQLRL 901          
BLAST of mRNA_P-wetherbeei_contig6864.1.2 vs. uniprot
Match: A0A7S4NAE6_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NAE6_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.640e-47
Identity = 104/277 (37.55%), Postives = 159/277 (57.40%), Query Frame = 1
Query:   16 GVRPWQLVEELLRQALALRDEGGGGMGGTERLVSFLDGTTRLRMVSLEGLTHHEQARRXXXXXXXLALVLNLYHLMICHAYFVLGPPSSPLRWASYFCNVSYECGGDVFSLAELEHCIIRACMTPPRQFLSKFVVPTAEYSFALRR-PEPRTNFVLNCGSVSGVPGVIVFRPDAVDAQLDQMSAYYLRETVEVNLAKKV----VTLPKMLSWYTNDFGSGPA-DVLRAVAQHADRRTGQALGTMLSATDG-----STVTVRYRGFNWRCRRIELLDD 813
            GV P  +VE  LR+AL   ++          L  FLD T+ L+ V++  LT  E+          +A  LNLYH+M  HAY VLG P S  +W SYF  +SY+C  ++FSL+ELEHCIIR   + P QF++KF++P + Y+FA+    + R NF LNCGS+S    V +FR D++ +Q+++ +  Y +ETV+V++  +     VTLP++  WY  DFG G + DV+R + ++  +R    L   L A DG       +++ +  F++ CR + L  D
Sbjct:  589 GVDPCHVVETALREALDPIEDNE-----VSNLCKFLDSTSDLKTVNVSELTGAER----------MAFFLNLYHVMATHAYLVLGVPDSSFKWVSYFNMISYQCSDEIFSLSELEHCIIREQTSSPSQFVAKFILPKSRYNFAVHSLVDWRVNFCLNCGSLSNPRSVPIFRADSLLSQMNESTRLYFKETVKVSVDSRKGVVSVTLPRICQWYATDFGRGRSTDVVRQIMKYLSQREQDILSRAL-APDGRHFKAGALSITFSSFDYTCRLLTLRGD 849          
BLAST of mRNA_P-wetherbeei_contig6864.1.2 vs. uniprot
Match: A0A7S4VAX1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VAX1_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.680e-47
Identity = 100/272 (36.76%), Postives = 156/272 (57.35%), Query Frame = 1
Query:   22 RPWQLVEELLRQALALRDEGGGGMGGTERLVSFLDGTTRLRMVSLEGLTHHEQARRXXXXXXXLALVLNLYHLMICHAYFVLGPPSSPLRWASYFCNVSYECGGDVFSLAELEHCIIRACMTPPRQFLSKFVVPTAEYSFALRRPEPRTNFVLNCGSVSGVPGVIVFRPDAVDAQLDQMSAYYLRETVEVNL----AKKVVTLPKMLSWYTNDFGSGPA-DVLRAVAQHADRRTGQALGTMLSATDG---STVTVRYRGFNWRCRRIELLDD 813
            +P ++  E L++ L   +           L +FLD  + L+ V++  +   E+          L   LNLYH+M+ HA+ VLG P S  +WAS+F  +SY+C  ++FSL ELEH I+RA M+ P QF++KFV+P ++Y FAL+R + R NF LNCGS+S    V V+R + ++ QLD     Y++++V+V         +V LP++  WY +DFG G A DV+  V ++ D+   + L   LS  D      +TV+Y  +N++CR + LL D
Sbjct:  958 QPNEVASEALQKVLEPMEHSEEA-----NLRAFLDSASALKAVNVSDMPESER----------LPFFLNLYHIMVMHAFLVLGVPDSAFKWASFFNMISYQCSDEIFSLTELEHSIVRANMSSPSQFVAKFVLPKSDYDFALKRSDYRINFALNCGSLSNPKMVPVYRSETINEQLDATVRNYVKQSVKVKKNIGGGNVLVVLPRICYWYASDFGRGRAVDVVYLVKKYLDKNIQELLPDKLSEGDWFSTGAITVKYLHYNYQCRHLTLLQD 1214          
BLAST of mRNA_P-wetherbeei_contig6864.1.2 vs. uniprot
Match: A0A7S3SJG3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SJG3_EMIHU)

HSP 1 Score: 173 bits (438), Expect = 2.560e-47
Identity = 112/287 (39.02%), Postives = 158/287 (55.05%), Query Frame = 1
Query:   31 QLVEELLRQALALRDEGGGGMGGTERLVSFLDGTTRLRMVSLEGLTHHEQARRXXXXXXXLALVLNLYHLMICHAYFVLGPPSSPLRWASYFCNVSYECGGDVFSLAELEHCIIRACMTPPRQFLSKFVVPTAEYSFALRRPEPRTNFVLNCGSVSGVPGVIVFRPDAVDAQLDQMSAYYLRETVEVNL----------AKKVVTLPKMLSWYTNDFGSGP-----ADVLRAVAQHADRRTGQALGTMLSATDGSTVTVRYRGFNWRCRR-IELLDDEELTGLLANG 843
            +     LR ALAL DE       + RLV+FLD  + L+ V L+GL   ++          LA  LN+YH MI HAY +LGPPSS L+  S+F  ++Y+ GGDVF+LAELEH ++RA    P+ F SK+V+P + YSFAL   + R NF L+CGS SG+  V V++P  + AQLD +++ +L  TV V+           A   +TLPK+  WY  DFGSG      A V     +  +R   + L + L+      + +RY  F++ C R IEL    E +G   +G
Sbjct:   68 ECAARALRLALAL-DEAEPL--SSPRLVAFLDAASSLKAVRLDGLDEEQK----------LAFFLNVYHTMIQHAYSLLGPPSSLLKAISFFNTIAYQVGGDVFTLAELEHNVLRAPSCRPKSFFSKWVLPKSSYSFALTTADYRLNFALSCGSASGLATVPVYQPTLLGAQLDAVASAFLARTVAVSCRSGGXXXXXDAAVALTLPKLFQWYARDFGSGKHAMEGAAVAMEFLRGPER---ELLRSRLAQEQKPDLEIRYAPFSFACSRLIELEVGRESSGRRISG 338          
BLAST of mRNA_P-wetherbeei_contig6864.1.2 vs. uniprot
Match: A0A7S1GPY8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GPY8_CYCTE)

HSP 1 Score: 172 bits (436), Expect = 4.120e-47
Identity = 96/260 (36.92%), Postives = 150/260 (57.69%), Query Frame = 1
Query:   37 VEELLRQALALRDEGGGGMGGTERLVSFLDGTTRLRMVSLEGLTHHEQARRXXXXXXXLALVLNLYHLMICHAYFVLGPPSSPLRWASYFCNVSYECGGDVFSLAELEHCIIRACMTPPRQFLSKFVVPTAEYSFALRRPEPRTNFVLNCGSVSGVPGVIVFRPDAVDAQLDQMSAYYLRETVEVNLAKK---VVTLPKMLSWYTNDFGSGP-ADVLRAVAQHADRRTGQALGTMLSATDG--STVTVRYRGFNWRCRRI 798
            +E  L + L++ DE    +  ++ L  FL+  + L+ V ++ L   E+          ++  LNLYH+MI HA+ VLG P S  +W SYF  +SY+C  D+FS+AELEH +IRA  T P QF SK V+P + +SFAL + + R NF LN GS S +P V ++RP  ++ QL++ +  +L+ T  V   ++   VVTLPK+  W+ +DFG+G    VLR V ++  +     L +  S  +   S V ++Y  F++ CR +
Sbjct:   80 IENALARGLSITDEATT-VEESQLLRLFLESASILKNVDVDSLGEKER----------MSFFLNLYHVMIMHAFLVLGAPDSSFKWISYFNAISYQCSDDIFSIAELEHNVIRAATTYPSQFFSKLVLPKSRFSFALTKGDYRINFCLNSGSCSNLPYVPIYRPSTLEQQLNESARRHLQSTARVTNKRQSSVVVTLPKICQWFADDFGNGSNTQVLRRVQKYMTQEQQDILESCWSEREQRYSNVAIKYAPFSFECRNL 328          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6864.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2G2_9STRA7.930e-7848.33DUF547 domain-containing protein n=1 Tax=Tribonema... [more]
A0A6H5KCR6_9PHAE3.630e-7144.37DUF547 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7R9Y7X5_9STRA9.130e-6344.90Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
D8LMK0_ECTSI4.260e-5851.87DUF547 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A836CH08_9STRA1.650e-5641.87DUF547 domain-containing protein n=1 Tax=Tribonema... [more]
A0A061RNH2_9CHLO1.210e-4838.06PH domain-containing protein n=2 Tax=Tetraselmis s... [more]
A0A7S4NAE6_9STRA1.640e-4737.55Hypothetical protein n=3 Tax=Odontella aurita TaxI... [more]
A0A7S4VAX1_9STRA1.680e-4736.76Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3SJG3_EMIHU2.560e-4739.02Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S1GPY8_CYCTE4.120e-4736.92Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6864contigP-wetherbeei_contig6864:47..2267 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr45626
PFAMsDUF547
Model size1104
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categorysignal anchor
Exons5
Evalue2.42e-42
EggNOG OGs29I52@1|root,2RRC0@2759|Eukaryota,2XF57@2836|Bacillariophyta
DescriptionProtein of unknown function, DUF547
Cds size756
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6864.1.2prot_P-wetherbeei_contig6864.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6864 137..2009 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186942.2905884-UTR-P-wetherbeei_contig6864:46..1361683186942.2905884-UTR-P-wetherbeei_contig6864:46..136Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6864 47..136 +
1683186942.3538182-UTR-P-wetherbeei_contig6864:2009..22671683186942.3538182-UTR-P-wetherbeei_contig6864:2009..2267Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6864 2010..2267 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186942.301599-CDS-P-wetherbeei_contig6864:136..2561683186942.301599-CDS-P-wetherbeei_contig6864:136..256Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6864 137..256 +
1683186942.3119512-CDS-P-wetherbeei_contig6864:485..6491683186942.3119512-CDS-P-wetherbeei_contig6864:485..649Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6864 486..649 +
1683186942.322758-CDS-P-wetherbeei_contig6864:905..11191683186942.322758-CDS-P-wetherbeei_contig6864:905..1119Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6864 906..1119 +
1683186942.3333037-CDS-P-wetherbeei_contig6864:1431..16071683186942.3333037-CDS-P-wetherbeei_contig6864:1431..1607Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6864 1432..1607 +
1683186942.3448918-CDS-P-wetherbeei_contig6864:1927..20091683186942.3448918-CDS-P-wetherbeei_contig6864:1927..2009Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6864 1928..2009 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6864.1.2

>prot_P-wetherbeei_contig6864.1.2 ID=prot_P-wetherbeei_contig6864.1.2|Name=mRNA_P-wetherbeei_contig6864.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
MGGTERLVSFLDGTTRLRMVSLEGLTHHEQARRKLLLLLLLALVLNLYHL
MICHAYFVLGPPSSPLRWASYFCNVSYECGGDVFSLAELEHCIIRACMTP
PRQFLSKFVVPTAEYSFALRRPEPRTNFVLNCGSVSGVPGVIVFRPDAVD
AQLDQMSAYYLRETVEVNLAKKVVTLPKMLSWYTNDFGSGPADVLRAVAQ
HADRRTGQALGTMLSATDGSTVTVRYRGFNWRCRRIELLDDEELTGLLAN
G*
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mRNA from alignment at P-wetherbeei_contig6864:47..2267+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6864.1.2 ID=mRNA_P-wetherbeei_contig6864.1.2|Name=mRNA_P-wetherbeei_contig6864.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2221bp|location=Sequence derived from alignment at P-wetherbeei_contig6864:47..2267+ (Phaeothamnion wetherbeei SAG_119_79)
GACGGCCGCGGCGCTGGCGTGCGGCCGTGGCAGCTGGTGGAGGAGCTGCT GCGGCAGGCACTGGCGCTGCGCGACGAAGGCGGCGGGGGAATGGGGGGCA CAGAACGGCTGGTCAGCTTCCTCGACGGCACGACGCGGCTGCGCATGGTC AGCCTAGAGGGGCTCACGCACCACGAGCAGGCAAGGCGGAAGCTGCTGTT GCTGCTGCTGGTTGTGTGCATGATGCAATGGCCGCTGATGGCATTGACCA GTATTCACTCTCCTTGGTTTTGCTCTGGCATGTGGACCGACCGCCTTATC TCCACGCCACCGCCGCTGCAGCTGCTGCTCCGTGATCTAACCTGCCGGTG CCGTCCCGTGTTTTAATCTAACGTCATTGGCCTCCATGGTTTCGACCGCC CTTTCCCACTGTCCGCTGCCTTGCCGCCCTCTCTTTCAGCTGGCGTTGGT GCTCAATCTGTACCACCTGATGATCTGCCACGCGTACTTCGTGCTGGGCC CGCCGTCGTCGCCGCTGCGGTGGGCGTCGTACTTCTGCAACGTTTCATAC GAGTGCGGCGGCGACGTCTTCTCGCTGGCCGAGCTTGAGCACTGCATTAT CCGGTACGTTATTTGGTGTTTTGTGGGCTCCGAAGACGCAGCAAGTTGGG GTGTTCTGACGTATTGTTGCATTTGTACCTCGTCTCCTGCTCCTCATATG CTGTGGTCATTCGTGGCTCGCTTCGTCTTAGAAAGGAATGCCGTAATATG GCACAGTGCTGCGGTTAGCTGAAGTTACGCGCTCCAAACCGTTTTGCGCT GGTCTGGCTGCCTCTCGTCCGCTCGCATCGCGTTCTGCCACGTTCCCCAC ACCTTGCAGGGCGTGCATGACGCCGCCGCGGCAGTTCCTCTCCAAGTTTG TGGTTCCAACGGCCGAGTACTCGTTCGCGCTGCGGCGCCCCGAGCCGCGA ACCAACTTCGTGCTCAACTGCGGCTCGGTCAGCGGTGTGCCAGGCGTCAT CGTGTTCCGGCCCGACGCGGTGGACGCGCAGCTGGACCAGATGAGTGCCT ACTACCTGCGGGAGACGGTCGAGGTGAGAGGAGGATTTCCGCTTCATTTC CGCACGAGCTTTCGTTTTCTAACCAAGAAAAGATAATGTTCTTGGAATGC CGGGTCGGTTGGTTTACGGTCGGTGCGTGTTGCTTGTTTTGGCACTTCTG TGGTGCTGAGCGTTGTCATCACGGTTTCAATTGCTCTGTTGGCATGTCCT TTTGCCGAGTCGCCTCCGCCGTTCTCCTTTAGGACATGGCGTGGCTCTGG TCTAAGCCACAATGTAAGCCATAATTGTCGCTGCTGCTCCCGGCTGATTC ACCTCATGTGTCACTCTCGTCATCGTTATGAAAAGGTGAACCTGGCGAAG AAGGTGGTGACGCTGCCCAAGATGCTCTCGTGGTACACCAATGACTTTGG GAGCGGGCCGGCGGACGTCCTGCGGGCGGTCGCGCAGCACGCCGACCGCC GCACGGGGCAGGCGCTTGGCACCATGCTGTCAGCCACCGACGGTAGCACT GTCACCGTCCGGTGAGGGGGGTGTTTTGGGGAGGATGTGGGGCTGATTGC GTCGGGCGGGAATTCTGATTAAGGGCTTTGCAGTTTTATTTGTTCTCCAT AAGAATAAGAAAGTCACGGTTAGTCAAGGAGCATCGACGAAGCAAACCGC TCGGTGTTATAGCGTCGATTTCATAGCTGCTGTGAAGGAGAAATCGCAAC GCCTCTCTGTGCCTTTCTGTTCGAAAGCTGCTGGTCCCATGTGGGTAATC ATGTGGGTAGCAAAAACCTTGGGCCTGACTTGTTGCCGGTCTCTCATGGA CCCCCCGACGCCGAAAAACTACGCCATGCAGGTACCGCGGCTTCAATTGG CGGTGCCGGCGCATCGAGCTCTTGGATGACGAGGAACTGACCGGACTTCT GGCAAACGGCTGACCGTTTTTGGCCCTCTTTGCGCTCCAGATCTTTTTCC GCGATGGGGTTGGCGGGCGGCTGGCATCGTCCGGCGAGCTGGCACGGTCT GCTCGGGGACCTCCCAAGCAAGCAAGATGGTGTTCTCTTTTGTTTACATA CGGTGTTCATAGGCGCTCTCCTGTGCGGAAAATGGAATGCAGTGGGAGGA GGGAGTGAGTGCGCCATTTCACAACGGGTACATAAGCAGGCTTCCCCCTA ATCCAGTCAACTGAACGCTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6864:47..2267+

>mRNA_P-wetherbeei_contig6864.1.2 ID=mRNA_P-wetherbeei_contig6864.1.2|Name=mRNA_P-wetherbeei_contig6864.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig6864:47..2267+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGGGCACAGAACGGCTGGTCAGCTTCCTCGACGGCACGACGCGGCT
GCGCATGGTCAGCCTAGAGGGGCTCACGCACCACGAGCAGGCAAGGCGGA
AGCTGCTGTTGCTGCTGCTGCTGGCGTTGGTGCTCAATCTGTACCACCTG
ATGATCTGCCACGCGTACTTCGTGCTGGGCCCGCCGTCGTCGCCGCTGCG
GTGGGCGTCGTACTTCTGCAACGTTTCATACGAGTGCGGCGGCGACGTCT
TCTCGCTGGCCGAGCTTGAGCACTGCATTATCCGGGCGTGCATGACGCCG
CCGCGGCAGTTCCTCTCCAAGTTTGTGGTTCCAACGGCCGAGTACTCGTT
CGCGCTGCGGCGCCCCGAGCCGCGAACCAACTTCGTGCTCAACTGCGGCT
CGGTCAGCGGTGTGCCAGGCGTCATCGTGTTCCGGCCCGACGCGGTGGAC
GCGCAGCTGGACCAGATGAGTGCCTACTACCTGCGGGAGACGGTCGAGGT
GAACCTGGCGAAGAAGGTGGTGACGCTGCCCAAGATGCTCTCGTGGTACA
CCAATGACTTTGGGAGCGGGCCGGCGGACGTCCTGCGGGCGGTCGCGCAG
CACGCCGACCGCCGCACGGGGCAGGCGCTTGGCACCATGCTGTCAGCCAC
CGACGGTAGCACTGTCACCGTCCGGTACCGCGGCTTCAATTGGCGGTGCC
GGCGCATCGAGCTCTTGGATGACGAGGAACTGACCGGACTTCTGGCAAAC
GGCTGA
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