mRNA_P-wetherbeei_contig6857.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6857.1.1
Unique NamemRNA_P-wetherbeei_contig6857.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6857.1.1 vs. uniprot
Match: A0A177R013_9PROT (LacI family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177R013_9PROT)

HSP 1 Score: 444 bits (1143), Expect = 1.180e-154
Identity = 220/319 (68.97%), Postives = 270/319 (84.64%), Query Frame = 1
Query:   10 KTVRCVIGIALALATHVAAAQDWPSKPVRFIVPYPPGGGTDVIARIVQEPLSRALGQQVVIENRGGAGGAVGTEAASKSAPDGYTFLFTLSSHTINPLLYKLSFDVERDFLSVGTVASLPQLIAANTSSPYRTMQDIVSQAKAQPGKVAFASVGAGTPSHIAGELLNLRAGIKLLHIPYKGGGPATTDVLGGQVPLLFVSIPAAMGFVKSGKLRPVAVTTLKRSGAAPDVPTVAEALGIPDYEVDSWYAIFAPARTPAAVVARMQQEVAKVVQIPEVKQKLLEQGADAVGNTSAELDQVVKAELKKWSALIQQAGIKLE 966
            + +  V+G+  A+A   A+AQDWP+KPVRFIVPYPPGGGTDVIARIVQ  L+  LGQQ++IENRGGAGGA+GTEAA+KSAPDGYTFLFTLSSHTINPLLYKL++DVE DF +V  + S+PQLIAA   SP  +M D+V+ AKA+PG +AFASVG GTP+HIAGELL LR GI L+H+PYKGGGPA  DVLGGQVPL  VS+PAA+  V++GKLR +AVTTLKR+  AP++PTVAEAL IPDYEVDSWYA+FAPA+TPA ++++MQ+ VA+ +++PEVKQKLLEQG D VG+T  ELD+VVK EL+KW+ +I+QA IKLE
Sbjct:    3 QAILFVLGLLAAMA---ASAQDWPAKPVRFIVPYPPGGGTDVIARIVQSRLAERLGQQIIIENRGGAGGALGTEAAAKSAPDGYTFLFTLSSHTINPLLYKLNYDVEHDFSAVTLIVSVPQLIAAYPGSPLHSMSDVVAAAKAKPGSIAFASVGNGTPAHIAGELLKLRTGIDLIHVPYKGGGPAIADVLGGQVPLAIVSMPAAISHVRAGKLRALAVTTLKRNPGAPEIPTVAEALKIPDYEVDSWYALFAPAKTPAPIISKMQKAVAQTIELPEVKQKLLEQGGDTVGSTPEELDRVVKLELRKWAEVIRQANIKLE 318          
BLAST of mRNA_P-wetherbeei_contig6857.1.1 vs. uniprot
Match: A0A537AF95_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537AF95_9PROT)

HSP 1 Score: 439 bits (1130), Expect = 1.120e-152
Identity = 218/319 (68.34%), Postives = 267/319 (83.70%), Query Frame = 1
Query:   10 KTVRCVIGIALALATHVAAAQDWPSKPVRFIVPYPPGGGTDVIARIVQEPLSRALGQQVVIENRGGAGGAVGTEAASKSAPDGYTFLFTLSSHTINPLLYKLSFDVERDFLSVGTVASLPQLIAANTSSPYRTMQDIVSQAKAQPGKVAFASVGAGTPSHIAGELLNLRAGIKLLHIPYKGGGPATTDVLGGQVPLLFVSIPAAMGFVKSGKLRPVAVTTLKRSGAAPDVPTVAEALGIPDYEVDSWYAIFAPARTPAAVVARMQQEVAKVVQIPEVKQKLLEQGADAVGNTSAELDQVVKAELKKWSALIQQAGIKLE 966
            KT+  V+G+  A+A    +A DWP+KPVRFIVPYPPGGGTDVIARIVQ  LS ALGQ ++IENRGGAGGA+GTEAA+K+ PDGYTFLFTLSSHTINPLLYKL+FD+ERDF  V  + S+PQLIAA   +   +MQD+V+ AK QPGK+AFASVG GTPSHIAGELL LR GI ++H+PYKGGGPA  D LGGQVPLL V++PAAM  V++GKLR +AVTT +R+  AP++PTVAEAL IPDYEVDSWYA+FAPA+TPAA+V+RMQ+E+A+ +++P+VK KLLEQG D VG+T  ELD+VVK EL+KW+ LI+ A IK+E
Sbjct:    3 KTMVLVLGMLAAMAV---SAHDWPAKPVRFIVPYPPGGGTDVIARIVQTRLSEALGQPIIIENRGGAGGALGTEAAAKALPDGYTFLFTLSSHTINPLLYKLNFDIERDFSPVSLIVSVPQLIAAYPGAHIESMQDVVAMAKLQPGKLAFASVGNGTPSHIAGELLKLRTGIDIVHVPYKGGGPAVADTLGGQVPLLMVTMPAAMSHVRAGKLRALAVTTRRRNPGAPEIPTVAEALQIPDYEVDSWYAMFAPAKTPAAIVSRMQKEIARTIELPDVKHKLLEQGGDTVGSTPEELDKVVKGELRKWAELIRDAHIKVE 318          
BLAST of mRNA_P-wetherbeei_contig6857.1.1 vs. uniprot
Match: A0A537CVL6_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CVL6_9PROT)

HSP 1 Score: 432 bits (1112), Expect = 6.120e-150
Identity = 219/319 (68.65%), Postives = 265/319 (83.07%), Query Frame = 1
Query:   10 KTVRCVIGIALALATHVAAAQDWPSKPVRFIVPYPPGGGTDVIARIVQEPLSRALGQQVVIENRGGAGGAVGTEAASKSAPDGYTFLFTLSSHTINPLLYKLSFDVERDFLSVGTVASLPQLIAANTSSPYRTMQDIVSQAKAQPGKVAFASVGAGTPSHIAGELLNLRAGIKLLHIPYKGGGPATTDVLGGQVPLLFVSIPAAMGFVKSGKLRPVAVTTLKRSGAAPDVPTVAEALGIPDYEVDSWYAIFAPARTPAAVVARMQQEVAKVVQIPEVKQKLLEQGADAVGNTSAELDQVVKAELKKWSALIQQAGIKLE 966
            K +  V+G+   LA   A AQDWP+KPV FIVPYPPGGGTDV+ARIVQ  LS ALGQ +VIENRGGAGGAVGTEAA+KSAPDGYTFLFTLSSHTINPLLYKL+FDVERDF  V  + S+PQLIAA   +P  +MQD+V+ AKA PG++ FASVG GTPSHIAGELL LR GI ++H+PYKGGGPA  D LGGQV LL V++PAA+  V++ KLR +AVTT++R+  AP++PTVAEAL I DYEVDSWYA+FAPA+TP A+VARMQ+E+A V+Q+P+VKQKLLEQG D VG+T  ELD+VVKAEL+KW+ +I+ A IK++
Sbjct:    3 KGIVLVLGL---LAAIPAWAQDWPAKPVHFIVPYPPGGGTDVVARIVQNRLSEALGQTIVIENRGGAGGAVGTEAAAKSAPDGYTFLFTLSSHTINPLLYKLNFDVERDFTPVTLIVSVPQLIAAYPGAPIESMQDVVAMAKAHPGRLYFASVGNGTPSHIAGELLKLRTGIDIVHVPYKGGGPAVADTLGGQVWLLIVTMPAAISHVRADKLRALAVTTIRRNPGAPEIPTVAEALKIQDYEVDSWYAMFAPAKTPPAIVARMQKEIAHVIQLPDVKQKLLEQGGDPVGSTPEELDRVVKAELRKWTEVIRDAKIKVD 318          
BLAST of mRNA_P-wetherbeei_contig6857.1.1 vs. uniprot
Match: A0A536X4Z1_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536X4Z1_9PROT)

HSP 1 Score: 431 bits (1107), Expect = 3.520e-149
Identity = 214/319 (67.08%), Postives = 264/319 (82.76%), Query Frame = 1
Query:   10 KTVRCVIGIALALATHVAAAQDWPSKPVRFIVPYPPGGGTDVIARIVQEPLSRALGQQVVIENRGGAGGAVGTEAASKSAPDGYTFLFTLSSHTINPLLYKLSFDVERDFLSVGTVASLPQLIAANTSSPYRTMQDIVSQAKAQPGKVAFASVGAGTPSHIAGELLNLRAGIKLLHIPYKGGGPATTDVLGGQVPLLFVSIPAAMGFVKSGKLRPVAVTTLKRSGAAPDVPTVAEALGIPDYEVDSWYAIFAPARTPAAVVARMQQEVAKVVQIPEVKQKLLEQGADAVGNTSAELDQVVKAELKKWSALIQQAGIKLE 966
            KT+   +G+ +A+    A+ ++WP KPVRFIVPYPPGGGTDVIARI+Q+PLS ALG QVVIENRGGAGGA+GTEAA+K+APDGYTFLFTLSSHTINPLLYKL+FDVE DF +V  + S+PQLIAA   +P  +M D+V+ AKAQPG + FASVG GTPSHIAGELL LR  I ++H+PYKGGGPA  D LGGQVPLL VS+PAA+  V++GKLR +AVTT+KRS  AP++PTVAEAL IPDYEVDSWYA+FAPA+TP A+V RM +E+   +++P V+QKLLEQG D VG+T  ELD+VVKAEL+KW+ +I+ A IK++
Sbjct:    3 KTIVLALGLLVAVC---ASGEEWPVKPVRFIVPYPPGGGTDVIARIMQQPLSEALGHQVVIENRGGAGGALGTEAAAKAAPDGYTFLFTLSSHTINPLLYKLNFDVEHDFAAVSLIVSVPQLIAAYPGAPLESMWDLVAMAKAQPGSLHFASVGNGTPSHIAGELLKLRTVIDIVHVPYKGGGPALADTLGGQVPLLIVSMPAALSHVRAGKLRALAVTTVKRSPGAPEIPTVAEALKIPDYEVDSWYAMFAPAKTPNAIVTRMNKEIVHAIRLPAVRQKLLEQGGDPVGSTPEELDRVVKAELRKWAEVIRDAHIKVD 318          
BLAST of mRNA_P-wetherbeei_contig6857.1.1 vs. uniprot
Match: A0A536SSS5_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SSS5_9PROT)

HSP 1 Score: 416 bits (1070), Expect = 1.490e-143
Identity = 204/316 (64.56%), Postives = 256/316 (81.01%), Query Frame = 1
Query:   19 RCVIGIALALATHVAAAQDWPSKPVRFIVPYPPGGGTDVIARIVQEPLSRALGQQVVIENRGGAGGAVGTEAASKSAPDGYTFLFTLSSHTINPLLYKLSFDVERDFLSVGTVASLPQLIAANTSSPYRTMQDIVSQAKAQPGKVAFASVGAGTPSHIAGELLNLRAGIKLLHIPYKGGGPATTDVLGGQVPLLFVSIPAAMGFVKSGKLRPVAVTTLKRSGAAPDVPTVAEALGIPDYEVDSWYAIFAPARTPAAVVARMQQEVAKVVQIPEVKQKLLEQGADAVGNTSAELDQVVKAELKKWSALIQQAGIKLE 966
            + V+ +A   A+ +A A DWP+KPVRFIVPYPPGGGTDVIARI+Q  LS  LG  V+++NRGGAGG +GTEA +K+A DGYTFLFTLSSHTINPLLYK+++DVERDF  V  + S+PQLIAA   +P  T+ DIV+ AK  PG++ FASVG GTPSHIAGELL LR  I ++H+PYKGGGPA  D LGGQVPL+ V++PAAM  V++GKLR +AVTT +R+  APD+PTVAEAL +PDYEVDSWYA+FAPA+TP A+VARMQ E+A  +Q PE++QKLLEQG D VG++   LD+VVKAEL+KW+ +I++A IKL+
Sbjct:    3 KVVLLVAALFASSIAVANDWPAKPVRFIVPYPPGGGTDVIARILQSRLSDGLGHSVIVDNRGGAGGVLGTEAVAKAAADGYTFLFTLSSHTINPLLYKVNYDVERDFAPVSLIVSVPQLIAAYPGAPIETVADIVTIAKQHPGELHFASVGNGTPSHIAGELLKLRTVIDIVHVPYKGGGPAVADTLGGQVPLIIVTMPAAMAQVRAGKLRALAVTTRRRNPGAPDIPTVAEALKVPDYEVDSWYALFAPAKTPPAIVARMQSEIAHTIQQPEIRQKLLEQGGDPVGSSPEHLDRVVKAELRKWAEVIREAHIKLD 318          
BLAST of mRNA_P-wetherbeei_contig6857.1.1 vs. uniprot
Match: A0A536XX84_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XX84_9PROT)

HSP 1 Score: 402 bits (1033), Expect = 6.960e-138
Identity = 197/311 (63.34%), Postives = 253/311 (81.35%), Query Frame = 1
Query:   34 IALALATHVAAAQDWPSKPVRFIVPYPPGGGTDVIARIVQEPLSRALGQQVVIENRGGAGGAVGTEAASKSAPDGYTFLFTLSSHTINPLLYKLSFDVERDFLSVGTVASLPQLIAANTSSPYRTMQDIVSQAKAQPGKVAFASVGAGTPSHIAGELLNLRAGIKLLHIPYKGGGPATTDVLGGQVPLLFVSIPAAMGFVKSGKLRPVAVTTLKRSGAAPDVPTVAEALGIPDYEVDSWYAIFAPARTPAAVVARMQQEVAKVVQIPEVKQKLLEQGADAVGNTSAELDQVVKAELKKWSALIQQAGIKLE 966
            + L + T  A AQ +P+KPVRF+V +PPGG  D++ARIVQ  L+  LGQ +++ENRGGAGGAVGTEA ++SAPDGYTFLFTLSSHTINP+LYKLS+DVERDF  V  V S+PQLIAA+ S+P +T++++V+ AK +PG  A+AS G GTP HIA ELL LRAGI L+H+PYKGGGPA  D + GQVP+L ++ PAA+   +SG+LR +AVTTLKR+ AAP++PTVAE LG+PDYEVDSW A+FAPA+TP  +VARM +E+A+VVQ+PEVKQKL+EQ AD VG+T  EL ++VK ELK+W+ +I +AGIK E
Sbjct:   11 LLLQVCTWSALAQQYPAKPVRFVVSFPPGGTVDIVARIVQPRLAEGLGQPIIVENRGGAGGAVGTEAVARSAPDGYTFLFTLSSHTINPMLYKLSYDVERDFAPVSLVVSVPQLIAAHPSAPAKTLRELVAMAKERPGVYAYASPGNGTPGHIAAELLKLRAGIDLVHVPYKGGGPALADAVAGQVPILVITAPAALPSARSGRLRALAVTTLKRTSAAPEIPTVAEELGLPDYEVDSWVAVFAPAKTPEPIVARMYKELARVVQLPEVKQKLVEQSADPVGSTPQELARIVKLELKRWAEVIAKAGIKGE 321          
BLAST of mRNA_P-wetherbeei_contig6857.1.1 vs. uniprot
Match: A0A537BDA7_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BDA7_9PROT)

HSP 1 Score: 402 bits (1033), Expect = 5.340e-137
Identity = 192/309 (62.14%), Postives = 251/309 (81.23%), Query Frame = 1
Query:   40 LALATHVAAAQDWPSKPVRFIVPYPPGGGTDVIARIVQEPLSRALGQQVVIENRGGAGGAVGTEAASKSAPDGYTFLFTLSSHTINPLLYKLSFDVERDFLSVGTVASLPQLIAANTSSPYRTMQDIVSQAKAQPGKVAFASVGAGTPSHIAGELLNLRAGIKLLHIPYKGGGPATTDVLGGQVPLLFVSIPAAMGFVKSGKLRPVAVTTLKRSGAAPDVPTVAEALGIPDYEVDSWYAIFAPARTPAAVVARMQQEVAKVVQIPEVKQKLLEQGADAVGNTSAELDQVVKAELKKWSALIQQAGIKLE 966
            L  A   A+AQ+WP KPVR++VP+PPGG  D+++R++Q  +S+ LGQ ++IE RGGAGG VGT   ++SAPDGYTFLFTLSSHTINPLLYKL++DVERDF  V  + S+PQLIA + + P ++M+++V+ AKAQPGK++FAS G GTPSHIAGELL LR GI LLH+PYKGGGPA  D L GQVP+L ++       V++G+LRP+AVTTLKRS   P++PTVAEALG+PDYEVDSW A+FAPA+TP +VVARMQ+E+A+VVQ+PEV+QKL+EQ AD V ++  ELD+VVKA+L+KW+ +I+ A IK +
Sbjct:   72 LLFAAAAASAQEWPGKPVRWVVPFPPGGSVDIVSRLMQNGISKGLGQPILIETRGGAGGTVGTAEVARSAPDGYTFLFTLSSHTINPLLYKLNYDVERDFAPVSLIVSIPQLIAVHPAVPIKSMRELVAAAKAQPGKLSFASAGNGTPSHIAGELLKLRTGIDLLHVPYKGGGPAVADTLAGQVPMLILTAAVVTSQVRAGRLRPLAVTTLKRSPGTPEIPTVAEALGLPDYEVDSWIAMFAPAKTPQSVVARMQKEIARVVQLPEVRQKLIEQTADPVASSPEELDRVVKADLRKWAEVIRSANIKAD 380          
BLAST of mRNA_P-wetherbeei_contig6857.1.1 vs. uniprot
Match: A0A537AZJ0_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537AZJ0_9PROT)

HSP 1 Score: 400 bits (1027), Expect = 5.480e-137
Identity = 198/314 (63.06%), Postives = 253/314 (80.57%), Query Frame = 1
Query:   25 VIGIALALATHVAAAQDWPSKPVRFIVPYPPGGGTDVIARIVQEPLSRALGQQVVIENRGGAGGAVGTEAASKSAPDGYTFLFTLSSHTINPLLYKLSFDVERDFLSVGTVASLPQLIAANTSSPYRTMQDIVSQAKAQPGKVAFASVGAGTPSHIAGELLNLRAGIKLLHIPYKGGGPATTDVLGGQVPLLFVSIPAAMGFVKSGKLRPVAVTTLKRSGAAPDVPTVAEALGIPDYEVDSWYAIFAPARTPAAVVARMQQEVAKVVQIPEVKQKLLEQGADAVGNTSAELDQVVKAELKKWSALIQQAGIKLE 966
            V  + L      A AQ++PS+P+RFIV YPPGG  D+ ARI+Q  LS +LGQ VVIENRGGAGGA+GT+AA+KSAPDGYTFL+TLSSHTINP  YKL++DVERDF  V  V S PQLIAAN ++P +T++++V+ A+ +PG  A+AS G+GTP HIA ELL  R GI ++H+PYKGGGPA  DVL GQVP LF++  AA+   +SG+LR +AVTT KR+ +APD+PTVAE L +P YEVDSW A+FAPA+TPAA+VARMQ+E+A+VV +PEVKQKL+EQGAD VG++  EL++VVK+ELK W+A+I+ AGIKLE
Sbjct:    7 VAALGLVAGCAGAFAQEYPSRPIRFIVTYPPGGTVDITARILQPKLSESLGQTVVIENRGGAGGALGTDAAAKSAPDGYTFLYTLSSHTINPFFYKLNYDVERDFAPVSLVVSAPQLIAANPNAPAKTLRELVAAARERPGFYAYASPGSGTPGHIAAELLKQRTGINIVHVPYKGGGPAVADVLAGQVPFLFLTASAALSQARSGRLRALAVTTRKRTASAPDIPTVAEELNLPGYEVDSWCAMFAPAKTPAAIVARMQKELARVVHLPEVKQKLIEQGADPVGSSPEELERVVKSELKSWAAVIRDAGIKLE 320          
BLAST of mRNA_P-wetherbeei_contig6857.1.1 vs. uniprot
Match: A0A537A619_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A537A619_9PROT)

HSP 1 Score: 395 bits (1015), Expect = 3.180e-135
Identity = 184/310 (59.35%), Postives = 248/310 (80.00%), Query Frame = 1
Query:   37 ALALATHVAAAQDWPSKPVRFIVPYPPGGGTDVIARIVQEPLSRALGQQVVIENRGGAGGAVGTEAASKSAPDGYTFLFTLSSHTINPLLYKLSFDVERDFLSVGTVASLPQLIAANTSSPYRTMQDIVSQAKAQPGKVAFASVGAGTPSHIAGELLNLRAGIKLLHIPYKGGGPATTDVLGGQVPLLFVSIPAAMGFVKSGKLRPVAVTTLKRSGAAPDVPTVAEALGIPDYEVDSWYAIFAPARTPAAVVARMQQEVAKVVQIPEVKQKLLEQGADAVGNTSAELDQVVKAELKKWSALIQQAGIKLE 966
            AL      A AQ+WP+KP+R++VP+PPGG  D+++R++Q  ++  LGQ +VIENRGGAGGAVGT   ++SAPDGYTFLF LSSHTINPLLYKL +DVERDF  V  + S+PQL A N ++ ++++ D+V+ AKAQPGK+++AS G GTPSHIAGELL L+ GI L+H+PYKGGGPA TD + G VP+LF++    +   ++GKLRP+AVTTLKRS  AP++PTVAEALG+PDYEVDSW A+FAPA+TP  V+ RMQ+E+A+VVQ+P+++ +L+EQ AD V ++  ELD+VVK EL+KW+ +I+ A IK+E
Sbjct:    7 ALLFVASAATAQEWPNKPIRWVVPFPPGGSLDIVSRMMQNRVAEGLGQPIVIENRGGAGGAVGTAEVARSAPDGYTFLFALSSHTINPLLYKLGYDVERDFAPVSLIVSIPQLFAVNPTTSFKSINDVVATAKAQPGKLSYASAGNGTPSHIAGELLKLKTGIDLVHVPYKGGGPAVTDTIAGHVPMLFLTAAVVIEHARAGKLRPLAVTTLKRSPGAPEIPTVAEALGLPDYEVDSWIAMFAPAKTPRQVIGRMQREIARVVQLPDIRARLIEQTADPVASSPEELDRVVKTELRKWAEVIRAANIKVE 316          
BLAST of mRNA_P-wetherbeei_contig6857.1.1 vs. uniprot
Match: A0A537G9M7_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537G9M7_9PROT)

HSP 1 Score: 392 bits (1006), Expect = 1.010e-133
Identity = 191/306 (62.42%), Postives = 248/306 (81.05%), Query Frame = 1
Query:   49 ATHVAAAQDWPSKPVRFIVPYPPGGGTDVIARIVQEPLSRALGQQVVIENRGGAGGAVGTEAASKSAPDGYTFLFTLSSHTINPLLYKLSFDVERDFLSVGTVASLPQLIAANTSSPYRTMQDIVSQAKAQPGKVAFASVGAGTPSHIAGELLNLRAGIKLLHIPYKGGGPATTDVLGGQVPLLFVSIPAAMGFVKSGKLRPVAVTTLKRSGAAPDVPTVAEALGIPDYEVDSWYAIFAPARTPAAVVARMQQEVAKVVQIPEVKQKLLEQGADAVGNTSAELDQVVKAELKKWSALIQQAGIKLE 966
            A   A +Q +P++P+RFIVP+PPGG  D+ ARI+Q  LS +LGQ +VIENRGGAGG VGTEAA +SAPDGYTFLFT S+HT+NP LYKLS+DVERDF  V  + S+PQLIAAN ++P +T++++V+ A+ +PG  A+AS G+GTP HIA ELL  RAGI ++H+PYKGGGPA  D + GQVP LF++ PA +   +SGKLR +AVTTLKR+ AAP+VPTVAE L +PDYEVD+W A+FAPA+TP  ++ARMQ+EVA+VV +PEVKQKLLEQ AD VG++  EL +VV+ ELK+W+ +I++AGIKLE
Sbjct:   20 AAAPALSQQYPARPIRFIVPFPPGGTLDITARIMQPKLSESLGQPIVIENRGGAGGVVGTEAAVRSAPDGYTFLFTFSAHTMNPALYKLSYDVERDFAPVSLLVSVPQLIAANPNAPAKTLRELVAAARERPGFYAYASPGSGTPGHIAAELLKRRAGIDMVHVPYKGGGPALADTIAGQVPFLFLTAPAGLPSARSGKLRALAVTTLKRTPAAPEVPTVAEELNLPDYEVDTWLALFAPAKTPEPIIARMQKEVARVVHLPEVKQKLLEQSADPVGSSPEELGRVVRTELKRWAEVIREAGIKLE 325          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6857.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A177R013_9PROT1.180e-15468.97LacI family transcriptional regulator n=1 Tax=Beta... [more]
A0A537AF95_9PROT1.120e-15268.34Tripartite tricarboxylate transporter substrate bi... [more]
A0A537CVL6_9PROT6.120e-15068.65Tripartite tricarboxylate transporter substrate bi... [more]
A0A536X4Z1_9PROT3.520e-14967.08Tripartite tricarboxylate transporter substrate bi... [more]
A0A536SSS5_9PROT1.490e-14364.56Tripartite tricarboxylate transporter substrate bi... [more]
A0A536XX84_9PROT6.960e-13863.34Tripartite tricarboxylate transporter substrate bi... [more]
A0A537BDA7_9PROT5.340e-13762.14Tripartite tricarboxylate transporter substrate bi... [more]
A0A537AZJ0_9PROT5.480e-13763.06Tripartite tricarboxylate transporter substrate bi... [more]
A0A537A619_9PROT3.180e-13559.35Tripartite tricarboxylate transporter substrate bi... [more]
A0A537G9M7_9PROT1.010e-13362.42Tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6857contigP-wetherbeei_contig6857:340..1308 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1504672.669787430
PFAMsTctC
Model size969
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.16e-123
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2VJBE@28216|Betaproteobacteria,4ACD2@80864|Comamonadaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size969
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186941.7869503-CDS-P-wetherbeei_contig6857:339..13081683186941.7869503-CDS-P-wetherbeei_contig6857:339..1308Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6857 340..1308 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6857.1.1prot_P-wetherbeei_contig6857.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6857 340..1308 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6857.1.1

>prot_P-wetherbeei_contig6857.1.1 ID=prot_P-wetherbeei_contig6857.1.1|Name=mRNA_P-wetherbeei_contig6857.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=323bp
MPGKTVRCVIGIALALATHVAAAQDWPSKPVRFIVPYPPGGGTDVIARIV
QEPLSRALGQQVVIENRGGAGGAVGTEAASKSAPDGYTFLFTLSSHTINP
LLYKLSFDVERDFLSVGTVASLPQLIAANTSSPYRTMQDIVSQAKAQPGK
VAFASVGAGTPSHIAGELLNLRAGIKLLHIPYKGGGPATTDVLGGQVPLL
FVSIPAAMGFVKSGKLRPVAVTTLKRSGAAPDVPTVAEALGIPDYEVDSW
YAIFAPARTPAAVVARMQQEVAKVVQIPEVKQKLLEQGADAVGNTSAELD
QVVKAELKKWSALIQQAGIKLE*
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mRNA from alignment at P-wetherbeei_contig6857:340..1308+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6857.1.1 ID=mRNA_P-wetherbeei_contig6857.1.1|Name=mRNA_P-wetherbeei_contig6857.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig6857:340..1308+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCGGAAAGACCGTTCGTTGCGTCATCGGTATCGCGCTCGCGTTGGC CACCCATGTGGCGGCGGCCCAGGACTGGCCTTCGAAGCCGGTCCGATTCA TCGTGCCGTACCCGCCCGGAGGCGGCACGGATGTCATCGCGCGGATCGTG CAGGAGCCGCTGTCCCGCGCGCTGGGGCAGCAGGTGGTGATAGAGAACCG CGGCGGGGCGGGCGGGGCGGTCGGGACGGAGGCGGCGTCCAAGTCCGCCC CCGATGGCTATACGTTCCTGTTCACGCTGTCCTCGCACACCATCAACCCG CTGCTCTACAAGCTTTCGTTCGACGTGGAGAGGGATTTCCTCTCGGTCGG CACGGTGGCCAGCCTGCCGCAATTGATCGCTGCGAACACGTCCTCGCCGT ACAGGACGATGCAGGACATCGTGTCGCAGGCCAAGGCCCAGCCGGGCAAG GTCGCTTTCGCCTCGGTGGGCGCGGGCACGCCTTCGCATATCGCGGGCGA ACTGCTGAACCTGCGCGCCGGCATCAAGCTGCTGCACATCCCGTACAAGG GCGGCGGGCCGGCCACGACGGACGTGCTGGGCGGGCAGGTGCCGCTGCTA TTCGTGTCGATTCCCGCCGCTATGGGATTCGTGAAGAGCGGCAAGCTCCG GCCCGTCGCCGTGACCACGCTGAAGCGCTCGGGCGCCGCGCCGGACGTGC CGACCGTGGCGGAAGCCCTCGGCATCCCGGATTACGAAGTCGACTCTTGG TACGCGATCTTCGCGCCGGCCCGGACGCCGGCGGCGGTGGTGGCGCGAAT GCAGCAGGAGGTCGCAAAGGTCGTGCAGATTCCGGAGGTGAAGCAAAAGC TGCTCGAGCAGGGCGCCGATGCGGTCGGCAACACGTCGGCCGAGCTCGAC CAGGTGGTGAAGGCAGAGCTGAAGAAGTGGTCCGCGCTGATCCAGCAGGC CGGAATCAAACTGGAATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6857:340..1308+

>mRNA_P-wetherbeei_contig6857.1.1 ID=mRNA_P-wetherbeei_contig6857.1.1|Name=mRNA_P-wetherbeei_contig6857.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig6857:340..1308+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCGGAAAGACCGTTCGTTGCGTCATCGGTATCGCGCTCGCGTTGGC
CACCCATGTGGCGGCGGCCCAGGACTGGCCTTCGAAGCCGGTCCGATTCA
TCGTGCCGTACCCGCCCGGAGGCGGCACGGATGTCATCGCGCGGATCGTG
CAGGAGCCGCTGTCCCGCGCGCTGGGGCAGCAGGTGGTGATAGAGAACCG
CGGCGGGGCGGGCGGGGCGGTCGGGACGGAGGCGGCGTCCAAGTCCGCCC
CCGATGGCTATACGTTCCTGTTCACGCTGTCCTCGCACACCATCAACCCG
CTGCTCTACAAGCTTTCGTTCGACGTGGAGAGGGATTTCCTCTCGGTCGG
CACGGTGGCCAGCCTGCCGCAATTGATCGCTGCGAACACGTCCTCGCCGT
ACAGGACGATGCAGGACATCGTGTCGCAGGCCAAGGCCCAGCCGGGCAAG
GTCGCTTTCGCCTCGGTGGGCGCGGGCACGCCTTCGCATATCGCGGGCGA
ACTGCTGAACCTGCGCGCCGGCATCAAGCTGCTGCACATCCCGTACAAGG
GCGGCGGGCCGGCCACGACGGACGTGCTGGGCGGGCAGGTGCCGCTGCTA
TTCGTGTCGATTCCCGCCGCTATGGGATTCGTGAAGAGCGGCAAGCTCCG
GCCCGTCGCCGTGACCACGCTGAAGCGCTCGGGCGCCGCGCCGGACGTGC
CGACCGTGGCGGAAGCCCTCGGCATCCCGGATTACGAAGTCGACTCTTGG
TACGCGATCTTCGCGCCGGCCCGGACGCCGGCGGCGGTGGTGGCGCGAAT
GCAGCAGGAGGTCGCAAAGGTCGTGCAGATTCCGGAGGTGAAGCAAAAGC
TGCTCGAGCAGGGCGCCGATGCGGTCGGCAACACGTCGGCCGAGCTCGAC
CAGGTGGTGAAGGCAGAGCTGAAGAAGTGGTCCGCGCTGATCCAGCAGGC
CGGAATCAAACTGGAATAG
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