mRNA_P-wetherbeei_contig6856.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6856.1.1 vs. uniprot
Match: A0A6H5KNH6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH6_9PHAE) HSP 1 Score: 218 bits (556), Expect = 6.030e-61 Identity = 100/182 (54.95%), Postives = 132/182 (72.53%), Query Frame = 2
Query: 398 RAC--FDIENTYNTDETGLFYRLLPRRSYLSPTGEGRQTVRGTKGMKAKDRITIYVCTNASGKQKVPLAVIGAAKNPRCFRGKQLPVTYFQQNRAWSDQRVMALWFSKVFLRHVRQLTGQPVALIMDNCSGHGELIDPRNQVKVICLPPNCTARRQPMDQGIIAALKVRYRTALLSQRIATL 937
RAC + +EN +N DETG++YRLLP+R+YLS T E R+T RGTKGMKAKDR++ Y+CTNA+G KVP+A+IG AKNPRCFR P+TYF Q AWSD W+ +VF+ +R+ T +PV L+MD C+ HG+L+DPR Q++V PPNCT + QPMD G+I K YR LL R++T+
Sbjct: 265 RACSKYKVENIFNVDETGMYYRLLPKRTYLSTT-EKRKTARGTKGMKAKDRVSAYMCTNATGTAKVPMAIIGRAKNPRCFRSSPSPLTYFSQANAWSDNATFKKWWLEVFIPFIRKWTHEPVLLLMDGCASHGDLVDPRGQIEVSTYPPNCTYKYQPMDMGVIETTKRYYRKGLLDIRVSTM 445
BLAST of mRNA_P-wetherbeei_contig6856.1.1 vs. uniprot
Match: A0A6H5JM90_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM90_9PHAE) HSP 1 Score: 204 bits (519), Expect = 7.050e-60 Identity = 101/181 (55.80%), Postives = 133/181 (73.48%), Query Frame = 2
Query: 416 ENTYNTDETGLFYRLLPRRSYLSPTGEGRQTVRGTKGMKAKDRITIYVCTNASGKQKVPLAVIGAAKNPRCFRGKQLPVTYFQQNRAWSDQRVMALWFSKVFLRHVRQLTGQPVALIMDNCSGHGELIDPRNQVKVICLPPNCTARRQPMDQGIIAALKVRYRTALLSQRIATLRNRAALR 958
E YN DET L YR++P+ +YL+P+ E ++TVRG K M+AKDR+T Y+ T+ASG+ KVPL+ IG AK PRCF+ + P+ YF Q AWSD RV LW+ +VFL HVR +T + V LIMDN H +L+DP+ QVK++ LPPNCT++ QPMD GIIAA KVR+RT LL R+ T+ + A LR
Sbjct: 85 EWVYNADETRLCYRIMPKATYLAPS-ELKKTVRGVKRMRAKDRVTAYMATSASGR-KVPLSFIGTAKEPRCFKIRGSPIEYFSQKNAWSDARVFKLWWLQVFLPHVRSVTSEKVILIMDNHGSHADLVDPKEQVKILELPPNCTSKHQPMDAGIIAAWKVRHRTKLLRIRVDTMTSAAQLR 263
BLAST of mRNA_P-wetherbeei_contig6856.1.1 vs. uniprot
Match: A0A6H5K258_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K258_9PHAE) HSP 1 Score: 196 bits (497), Expect = 8.960e-56 Identity = 101/194 (52.06%), Postives = 131/194 (67.53%), Query Frame = 2
Query: 416 ENTYNTDETGLFYRLLPRRSYLSPTGEGRQTVRGTKGMKAKDRITIYVCTNASGKQKVPLAVIGAAKNPRCFRGKQLPVTYFQQNRAWSDQRVMALWFSKVFLR-------------HVRQLTGQPVALIMDNCSGHGELIDPRNQVKVICLPPNCTARRQPMDQGIIAALKVRYRTALLSQRIATLRNRAALR 958
E YN D TGL YR++P+ +YL+P+ E ++TVRG KGM+AKDR+T Y+ T+ SG+ KVPL+ IG AK PRCF+ + P+ YF Q AWSD RV LW+S+VFL HVR +T + V LIMDN S H +L+D + QVK+ LPPNCT++ QPMD GIIAA KVRYR LL R+ T+ + LR
Sbjct: 94 EGVYNADGTGLCYRIMPKATYLAPS-ELKKTVRGVKGMRAKDRVTAYMATSGSGR-KVPLSFIGTAKEPRCFKIRGSPIKYFSQKNAWSDARVFNLWWSQVFLLFDNWVTRIIDHLPHVRSVTSEKVLLIMDNHSSHADLVDTKEQVKIRELPPNCTSKHQPMDAGIIAAWKVRYRAKLLGIRVDTMTSTTQLR 285
BLAST of mRNA_P-wetherbeei_contig6856.1.1 vs. uniprot
Match: A0A2V3IZS1_9FLOR (Jerky protein-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZS1_9FLOR) HSP 1 Score: 192 bits (487), Expect = 7.440e-54 Identity = 90/171 (52.63%), Postives = 123/171 (71.93%), Query Frame = 2
Query: 407 FDIENTYNTDETGLFYRLLPRRSYLSPTGEGRQTVRGTKGMKAKDRITIYVCTNASGKQKVPLAVIGAAKNPRCFRGKQLPVTYFQQNRAWSDQRVMALWFSKVFLRHVRQLTGQPVALIMDNCSGHG-ELIDPRNQVKVICLPPNCTARRQPMDQGIIAALKVRYRTALL 916
FD + +N DETGLF++L P+R+Y+ + E R+ +RGTK MKAK R+++YVCT+++G KVPLA+IGAAKNPRCFR + VTYF Q AWSD WF +VF+ +VR+ T + V L+MDNC HG +++D QV + LPPNCT+ QPMD G+IA LK +Y++ LL
Sbjct: 195 FDADCIFNMDETGLFFKLFPKRTYVLAS-EDRKRLRGTKDMKAKARVSVYVCTDSTGLHKVPLAIIGAAKNPRCFRKGEPAVTYFSQENAWSDSVTYRRWFLEVFMPYVRRYTSKRVTLVMDNCGPHGTDVLDINGQVTIFTLPPNCTSLFQPMDMGVIATLKAKYKSKLL 364
BLAST of mRNA_P-wetherbeei_contig6856.1.1 vs. uniprot
Match: A0A6H5J9E2_9PHAE (DDE-1 domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E2_9PHAE) HSP 1 Score: 195 bits (496), Expect = 7.570e-54 Identity = 97/193 (50.26%), Postives = 131/193 (67.88%), Query Frame = 2
Query: 407 FDIENTYNTDETGLFYRLLPRRSYLSPTGEGRQTVRGTKGMKAKDRITIYVCTNASGKQKVPLAVIGAAKNPRCFRGKQLPVTYFQQNRAWSDQRVMALWFSKVFLRHVRQLTGQPVALIMDNCSGHGELIDPRNQVKVICLPPNCTARRQPMDQGIIAALKVRYRTALLSQRIATLRNRAALRAALPPRRAA 985
+ N +N DETG+ ++L+ RR+YL+ E R+T RG+K M+ KDRI+ +C NA+G KV LA+IG AKNPRCFR ++ P+ YF Q+ AWSD W+ +VFL +R+ T +PV L+MD CS HG+LIDP QV+V+ PPNCT+ QPMD GIIAA KV YR LL +++T+ ALRA R+ A
Sbjct: 86 YPARNIFNVDETGIQWKLIARRTYLAAF-EDRKTTRGSKNMEFKDRISAIMCANATGTAKVSLAIIGTAKNPRCFRRRKCPLKYFAQSNAWSDGPTFKKWWQEVFLPFIRRWTHEPVLLLMDGCSSHGDLIDPVGQVEVVMYPPNCTSVHQPMDMGIIAATKVIYRRELLDAKVSTMLVAHALRAEAKSRKMA 277
BLAST of mRNA_P-wetherbeei_contig6856.1.1 vs. uniprot
Match: A0A6H5JB59_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB59_9PHAE) HSP 1 Score: 187 bits (474), Expect = 1.010e-51 Identity = 95/173 (54.91%), Postives = 126/173 (72.83%), Query Frame = 2
Query: 461 LPRRSYLSPTGEGRQTVRGTKGMKAKDRITIYVCTNASGKQKVPLAVIGAAKNPRCFRGKQLPVTYFQQNRAWSDQRVMALWFSKVFLRHVRQLTGQPVALIMDNCSGHGELIDPRNQVKVICLPPNCTARRQPMDQGIIAALKVRYRTALLSQRIATLRNRAALRAALPPRR 979
+P+ +YL+P+ E ++T+RG KGM+AKDR+T Y+ T+ASG+ KVPL+ IG AK PRCF+ + + YF Q A SD RV LW+S+VFL HVR +T + V LIMDN S H +L+DP+ QVK++ LPPNCT++ QPMD GIIAA KVRYRT LL R+ T+ + A LR RR
Sbjct: 1 MPKATYLAPS-ELKKTMRGVKGMRAKDRVTAYMATSASGR-KVPLSFIGTAKEPRCFKIRGSTIKYFSQKNACSDARVFKLWWSQVFLPHVRSVTSEKVFLIMDNHSSHADLVDPKEQVKILDLPPNCTSKHQPMDAGIIAAWKVRYRTKLLGIRVDTMTSAAQLREQAKERR 171
BLAST of mRNA_P-wetherbeei_contig6856.1.1 vs. uniprot
Match: A0A6H5JUU2_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU2_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.030e-51 Identity = 97/186 (52.15%), Postives = 126/186 (67.74%), Query Frame = 2
Query: 401 ACFDIENTYNTDETGLFYRLLPRRSYLSPTGEGRQTVRGTKGMKAKDRITIYVCTNASGKQKVPLAVIGAAKNPRCFRGKQLPVTYFQQNRAWSDQRVMALWFSKVFLRHVRQLTGQPVALIMDNCSGHGELIDPRNQVKVICLPPNCTARRQPMDQGIIAALKVRYRTALLSQRIATLRNRAALR 958
A + E YN DETGL YR++P+ +YL+P+ E R+TVRG KGM+AKDR+T Y+ T+ASG+ KVPL+ IG AK PRCF+ + P+ YF Q AWSD RV LW+S+VFL HVR +T + V LIMDN S H +L+DP+ Q PMD GI+AA +VRYRT LL R+ T+ + A LR
Sbjct: 110 AQYTPECVYNADETGLCYRIMPKATYLAPS-ELRKTVRGVKGMRAKDRVTAYMATSASGR-KVPLSFIGTAKEPRCFKIRGSPIKYFSQKNAWSDARVFKLWWSQVFLPHVRSVTSEKVLLIMDNHSSHADLVDPKEQ---------------PMDAGILAAWRVRYRTKLLGIRVDTMTSAAQLR 278
BLAST of mRNA_P-wetherbeei_contig6856.1.1 vs. uniprot
Match: A0A6H5JRP4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRP4_9PHAE) HSP 1 Score: 190 bits (483), Expect = 1.120e-51 Identity = 95/181 (52.49%), Postives = 126/181 (69.61%), Query Frame = 2
Query: 416 ENTYNTDETGLFYRLLPRRSYLSPTGEGRQTVRGTKGMKAKDRITIYVCTNASGKQKVPLAVIGAAKNPRCFRGKQLPVTYFQQNRAWSDQRVMALWFSKVFLRHVRQLTGQPVALIMDNCSGHGELIDPRNQVKVICLPPNCTARRQPMDQGIIAALKVRYRTALLSQRIATLRNRAALR 958
E YN DETGL YR++P+ +YL+P+ E ++TVRG KGM+AKDR+T Y+ T+ASG++ PRCF+ + P+ YF Q AWS RV LW+S+VFL HVR +T + V LIMDN S H +L+DP+ Q+K++ LPPNCT + QP D GIIAA KVRYRT LL R+ T+ + A LR
Sbjct: 124 ECVYNADETGLCYRIMPKATYLAPS-ELKKTVRGVKGMRAKDRVTAYMATSASGRK------------PRCFKIRGSPIKYFSQKNAWSVARVFKLWWSQVFLPHVRSVTSEKVLLIMDNHSSHADLVDPKEQLKILELPPNCTRKHQPRDAGIIAAWKVRYRTKLLGIRVDTMTSAAQLR 291
BLAST of mRNA_P-wetherbeei_contig6856.1.1 vs. uniprot
Match: A0A2V3J223_9FLOR (Jerky protein-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J223_9FLOR) HSP 1 Score: 190 bits (483), Expect = 1.530e-51 Identity = 92/187 (49.20%), Postives = 130/187 (69.52%), Query Frame = 2
Query: 407 FDIENTYNTDETGLFYRLLPRRSYLSPTGEGRQTVRGTKGMKAKDRITIYVCTNASGKQKVPLAVIGAAKNPRCFRGKQLPVTYFQQNRAWSDQRVMALWFSKVFLRHVRQLTGQPVALIMDNCSGHG-ELIDPRNQVKVICLPPNCTARRQPMDQGIIAALKVRYRTALLSQRIATLRNRAALRAA 964
FD + +N DETGLF++L P+R+Y+ + E R+ +RGTK MKAK R+++YVCT+++G KV LA+IGAAKNPRCFR + V YF Q AWSD WF +VF+ +VR+ T + VAL+MDNC H +++D QV + LPPNCT+ QPMD G+IA LK +Y++ LL + ++T+ + LR A
Sbjct: 177 FDADCIFNMDETGLFFKLFPKRTYVLAS-EDRKRLRGTKDMKAKARVSVYVCTDSTGIHKVQLAIIGAAKNPRCFRKGETTVNYFSQKNAWSDSVTYRRWFLEVFMPYVRRYTSKKVALVMDNCGPHATDVLDVSGQVTIFTLPPNCTSLFQPMDMGVIATLKAKYKSKLLRKILSTVEDNKELRQA 362
BLAST of mRNA_P-wetherbeei_contig6856.1.1 vs. uniprot
Match: E9GK73_DAPPU (DDE-1 domain-containing protein (Fragment) n=2 Tax=Daphnia pulex TaxID=6669 RepID=E9GK73_DAPPU) HSP 1 Score: 179 bits (454), Expect = 3.470e-51 Identity = 83/166 (50.00%), Postives = 114/166 (68.67%), Query Frame = 2
Query: 425 YNTDETGLFYRLLPRRSYLSPTGEGRQTVRGTKGMKAKDRITIYVCTNASGKQKVPLAVIGAAKNPRCFRGKQLPVTYFQQNRAWSDQRVMALWFSKVFLRHVRQLTGQPVALIMDNCSGHG-ELIDPRNQVKVICLPPNCTARRQPMDQGIIAALKVRYRTALLS 919
+N DETGLF+R LP R+Y+ R+TVRGTK ++AKDR+T+ +C NA+G K+ ++G+AKNP CFR +Q PV Y Q AW D+ + W++ +FL +R+ T +PVAL+MDNCSGH DP QV++I PPNCT+ QP+DQGII LK Y+ +LS
Sbjct: 2 FNMDETGLFFRALPTRTYVCREEGQRKTVRGTKALRAKDRLTLVLCANATGTCKIDPLLVGSAKNPHCFRDQQSPVPYVNQKNAWVDREIYRGWWNNIFLPAIRKHTKEPVALLMDNCSGHDPSCADPTGQVEIIFFPPNCTSVFQPLDQGIITTLKTLYKREMLS 167 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6856.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6856.1.1 >prot_P-wetherbeei_contig6856.1.1 ID=prot_P-wetherbeei_contig6856.1.1|Name=mRNA_P-wetherbeei_contig6856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp MKAKDRITIYVCTNASGKQKVPLAVIGAAKNPRCFRGKQLPVTYFQQNRAback to top mRNA from alignment at P-wetherbeei_contig6856:1186..2483+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6856.1.1 ID=mRNA_P-wetherbeei_contig6856.1.1|Name=mRNA_P-wetherbeei_contig6856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1298bp|location=Sequence derived from alignment at P-wetherbeei_contig6856:1186..2483+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6856:1186..2483+ >mRNA_P-wetherbeei_contig6856.1.1 ID=mRNA_P-wetherbeei_contig6856.1.1|Name=mRNA_P-wetherbeei_contig6856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig6856:1186..2483+ (Phaeothamnion wetherbeei SAG_119_79)back to top |