mRNA_P-wetherbeei_contig6835.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6835.2.1 vs. uniprot
Match: A0A3B6RA42_WHEAT (Uncharacterized protein n=2 Tax=Triticum aestivum TaxID=4565 RepID=A0A3B6RA42_WHEAT) HSP 1 Score: 79.7 bits (195), Expect = 6.560e-13 Identity = 69/244 (28.28%), Postives = 100/244 (40.98%), Query Frame = 1
Query: 319 TGGAVWSPCVELSRWLCLMEPTMEDARHQQESTIPAIRGATILEIGAGLGLLSIVAHRLGAKTIVATDFDSGDGLIGLLQKNIAENCQRPGQGHDRGHCSXXXXXXXXXXXGGKDETGNTRPMLHIFNLPWGDENALKKAL--------EPFGGHLPELVLASDVLHLPELYPQLTATLRMACRDGSVTLLSCQQRNPAAEDGFVEDLAKDFAVARLHVS------KDGRLAIFMLRSAALVPP 1008
TG VW V L+++L H + + +RGA +++GAG GL+S+VA LGA+ +VATD + LL+KN+ EN R + L WGDE L L EP PELVL SDV+++ E L ATL + LL+ + RN + F+E +F + + + R+AIF+L PP
Sbjct: 187 TGAVVWDSAVVLAKFL----------EHAADGGLLPVRGARAVDLGAGCGLVSVVAALLGAR-VVATDLPD---RVRLLRKNLEEN---------------------------------VRGSARVAELVWGDEYELDPELLLWLDPEAEP-----PELVLGSDVVYIEEAVGDLLATLTRLAGPRTTVLLAGELRNDVVVECFLEAAMAEFEIGCIEQEQWHPDFRTNRVAIFILLKKKTPPP 378
BLAST of mRNA_P-wetherbeei_contig6835.2.1 vs. uniprot
Match: A0A3B6RSD9_WHEAT (Uncharacterized protein n=1 Tax=Triticum aestivum TaxID=4565 RepID=A0A3B6RSD9_WHEAT) HSP 1 Score: 78.2 bits (191), Expect = 1.890e-12 Identity = 72/245 (29.39%), Postives = 102/245 (41.63%), Query Frame = 1
Query: 319 TGGAVWSPCVELSRWLCLMEPTMEDARHQQESTIPAIRGATILEIGAGLGLLSIVAHRLGAKTIVATDFDSGDGLIGLLQKNIAEN-CQRPGQGHDRGHCSXXXXXXXXXXXGGKDETGNTRPMLHIFNLPWGDENALKKAL--------EPFGGHLPELVLASDVLHLPELYPQLTATLRMACRDGSVTLLSCQQRNPAAEDGFVEDLAKDFAVARLHVS------KDGRLAIFMLRSAALVPP 1008
TG VW V L+++L H ++ + +RGA +++GAG GL+S+VA LGA+ +VATD + LL+KN+ EN C G G + L WGDE L L EP PELVL SDV++ E L ATL + LL+ + RN + F+E +F V + + R+AIF+L PP
Sbjct: 159 TGAVVWDSAVVLAKFL----------EHAADAGLLPVRGARAVDLGAGCGLVSVVAALLGAR-VVATDLPD---RVRLLRKNLEENVCNGDGDGGS----------------------------ATVAELVWGDEYELDPELLLWLDTEAEP-----PELVLGSDVVYSEEAVGDLLATLCRLAGPRTTVLLAGELRNDVVVECFLEAAMAEFEVGCIEQEQWHPDFRTNRVAIFILLRKTPPPP 356
BLAST of mRNA_P-wetherbeei_contig6835.2.1 vs. uniprot
Match: A0A0Q3K6B8_BRADI (Uncharacterized protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3K6B8_BRADI) HSP 1 Score: 75.9 bits (185), Expect = 6.670e-12 Identity = 69/228 (30.26%), Postives = 99/228 (43.42%), Query Frame = 1
Query: 319 TGGAVWSPCVELSRWLCLMEPTMEDARHQQESTIPAIRGATILEIGAGLGLLSIVAHRLGAKTIVATDFDSGDGLIGLLQKNIAENCQRPGQGHDRGHCSXXXXXXXXXXXGGKDETGNTRPMLHIFNLPWGDENALKKALEPFGGHLPELVLASDVLHLPELYPQLTATLRMACRDGSVTLLSCQQRNPAAEDGFVEDLAKDFAVARLHVS------KDGRLAIFML 984
TG VW V L+++L E D + +RG LE+GAG GL+ IVA LGA+ +VATD + LL KNI +N D C GG + L WGDE+ + L+ G H + +L SDV++ E L ATL D + LL+ + RN + F+E +DF + + + R+AIF+L
Sbjct: 99 TGAVVWDSAVVLAKFL---EHAAADT-----GALKGLRGGRALELGAGCGLVGIVAALLGAR-VVATDLHD---RLRLLAKNIEQNL-------DSSSC----------WGGGSAQAAE---------LVWGDEDPV---LDDDGSHDFDFILGSDVVYSEEAVDPLVATLNGLAGDRTTILLAGELRNDVVLECFLEAAMEDFDIGSIQQEQWHPDFRTNRVAIFIL 285
BLAST of mRNA_P-wetherbeei_contig6835.2.1 vs. uniprot
Match: A0A8I6XZT8_HORVV (Uncharacterized protein n=3 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6XZT8_HORVV) HSP 1 Score: 73.6 bits (179), Expect = 2.800e-11 Identity = 68/230 (29.57%), Postives = 101/230 (43.91%), Query Frame = 1
Query: 319 TGGAVWSPCVELSRWLCLMEPTMEDARHQQES-TIPAIRGATILEIGAGLGLLSIVAHRLGAKTIVATDFDSGDGLIGLLQKNIAENCQRPGQGHDRGHCSXXXXXXXXXXXGGKDETGNTRPMLHIFNLPWGDENALKKALEPFGGHLPELVLASDVLHLPELYPQLTATLRMACRDGSVTLLSCQQRNPAAEDGFVED-LAKDFAVARLHVS------KDGRLAIFML 984
TG VW V L+++L H +S +P +RGA +++GAG GL+S+VA LGA+ +VATD + LL+KN+ EN G + G+ + L WGDE L A PELVL SDV++ E L ATL G+ LL+ + R + F+E +A F + + + R+A+F+L
Sbjct: 75 TGAVVWDSGVVLAKFL----------EHAADSGLLPVLRGARAVDLGAGCGLVSVVAALLGAR-VVATDLPD---RVRLLRKNLEENV-------------------------GDGDGGSAT----VAELVWGDEYELDPA--------PELVLGSDVVYSEEAVGDLVATLTRLAGPGTTVLLAGELRADVVVECFLEAAMAAGFEIGCVEQDQWHPDFRTNRVAVFIL 253
BLAST of mRNA_P-wetherbeei_contig6835.2.1 vs. uniprot
Match: UPI001F5C1BAD (protein N-lysine methyltransferase METTL21A-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C1BAD) HSP 1 Score: 73.6 bits (179), Expect = 3.100e-11 Identity = 66/228 (28.95%), Postives = 101/228 (44.30%), Query Frame = 1
Query: 319 TGGAVWSPCVELSRWLCLMEPTMEDARHQQESTIPAIRGATILEIGAGLGLLSIVAHRLGAKTIVATDFDSGDGLIGLLQKNIAENCQRPGQGHDRGHCSXXXXXXXXXXXGGKDETGNTRPMLHIFNLPWGDENALKKALEPFGGHLPELVLASDVLHLPELYPQLTATLRMACRDGSVTLLSCQQRNPAAEDGFVEDLAKDFAVARLHVS------KDGRLAIFML 984
TG VW V L+++L H + + A RGA +E+GAG GL+ +VA LGA+ +VATD + LL+KN+ EN PG G R + L WG+++ +P H PEL+L SDV++ E L ATL + + LL+ + RN + F+E ++F + + + R+AIF+L
Sbjct: 78 TGAVVWDSGVVLAKFL----------EHAADRGLLAARGARAVELGAGCGLVGVVAALLGAR-VVATDLPD---RLRLLRKNLEENLG-PGDGDAR-----------------------------VAELVWGEDDDP----DPDLMH-PELLLGSDVVYSEEAVDDLLATLSLLAGHNTTVLLAGELRNDVVLECFLEAAMEEFVIGCIEQEQWHPDFRTNRVAIFIL 256
BLAST of mRNA_P-wetherbeei_contig6835.2.1 vs. uniprot
Match: UPI001CFC0F47 (protein N-lysine methyltransferase METTL21A n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFC0F47) HSP 1 Score: 70.5 bits (171), Expect = 1.730e-10 Identity = 76/252 (30.16%), Postives = 110/252 (43.65%), Query Frame = 1
Query: 235 SRRTFNFSMGDGRTIGANITQNF--IGIDDTGGAVWSPCVELSRWLCLMEPTMEDARHQQESTIPAIRGATILEIGAGLGLLSIVAHRLGAKTIVATDFDSGDGLIGLLQKNIAENCQRPGQGHDRGHCSXXXXXXXXXXXGGKDETGNTRPMLHIFNLPWGDENALKKALEPF--GGHLPELVLASDVLHLPELYPQLTATLRMACRDGSVTLLSCQQRNPAAEDGFVEDLAKDFAVARLHVSKDGRLAIF 978
S TFNF+ TI +I QN+ +G+ VW V L +L ES I+G +++E+GAG GL+ IVA LGA T+ TD + L+ N+ N P H R I L WG + LE F GG +L+L +D+++L E + L TL C D +V LLSC+ R E+ F++ L F VA++H +K+ + IF
Sbjct: 20 SSATFNFAE---HTI--HIKQNWKELGV---AAVVWDAAVILCMYL--------------ESGAVQIKGTSVIELGAGTGLVGIVAVLLGA-TVTITDRKVA---MNFLESNVRANL--PAGLHSR---------------------------AQIKELTWGHQ------LEHFQKGGF--DLILGADIIYLEETFEDLLKTLEHLCSDKTVVLLSCRIRYERDEN-FLKKLGTTFFVAQVHYNKEKDVYIF 207
BLAST of mRNA_P-wetherbeei_contig6835.2.1 vs. uniprot
Match: A0A6P4YFT4_BRABE (protein-lysine methyltransferase METTL21E-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YFT4_BRABE) HSP 1 Score: 69.3 bits (168), Expect = 5.560e-10 Identity = 56/212 (26.42%), Postives = 92/212 (43.40%), Query Frame = 1
Query: 313 DDTGGAVWSPCVELSRWLCLMEPTMEDARHQQESTIPAIRGATILEIGAGLGLLSIVAHRLGAKTIVATDFDSGDGLIGLLQKNIAENCQRPGQGHDRGHCSXXXXXXXXXXXGGKDETGNTRPMLHIFNLPWGDENALKKALEPFGGHLPELVLASDVLHLPELYPQLTATLRMACRDGSVTLLSCQQRNPAAEDGFVEDLAKDFAVARLH 948
DD G VW V+L +L + M+D + +LE+GAG+GL+ IVA LGA + TD + ++G +++N+ N + G RP++ WG + L K P G + V+ +DV+++ E++ L+ TLR C + LL C R + + F+E KDF + + H
Sbjct: 44 DDIGKRVWPSAVDLCHFLQKGDFPMQDKK--------------VLELGAGIGLVGIVASLLGAD-VTLTDLPN---IVGNMEENVRANTKE-----------------------GCKYPPKVRPLV------WGRD--LHKIKGPKEGVHYDYVIGTDVIYIEEVFHDLSVTLRHFCDPRTTVLLGCHFRVKSRDLKFIELFKKDFKIVKEH 206
BLAST of mRNA_P-wetherbeei_contig6835.2.1 vs. uniprot
Match: A0A5A9NRK0_9TELE (Protein N-lysine methyltransferase METTL21A n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9NRK0_9TELE) HSP 1 Score: 68.2 bits (165), Expect = 1.090e-9 Identity = 51/184 (27.72%), Postives = 81/184 (44.02%), Query Frame = 1
Query: 427 IRGATILEIGAGLGLLSIVAHRLGAKTIVATDFDSGDGLIGLLQKNIAENCQRPGQGHDRGHCSXXXXXXXXXXXGGKDETGNTRPMLHIFNLPWGDENALKKALEPFGGHLPELVLASDVLHLPELYPQLTATLRMACRDGSVTLLSCQQRNPAAEDGFVEDLAKDFAVARLHVSKDGRLAIF 978
++G +E+GAG GL+ IVA LGAK + + + L +Q+NI N Q P + L WG+ L P G + ELVL +D+++L E +P L TL + +V LLSC+ R ++ F+ DL + F+V +H + + I+
Sbjct: 64 LKGKRAIELGAGTGLVGIVAALLGAKVTITDRKPALEFLAANVQENIPPNQQ---------------------------------PSAQVSELTWGEN----LDLYPPGSY--ELVLGADIVYLEETFPALLKTLEHLSSENTVVLLSCRIRYER-DERFLMDLKRRFSVEEVHYDSERDVHIY 207
BLAST of mRNA_P-wetherbeei_contig6835.2.1 vs. uniprot
Match: A0A3B4TET4_SERDU (EEF1A lysine methyltransferase 3 n=4 Tax=Carangaria TaxID=1489904 RepID=A0A3B4TET4_SERDU) HSP 1 Score: 67.4 bits (163), Expect = 2.170e-9 Identity = 55/205 (26.83%), Postives = 89/205 (43.41%), Query Frame = 1
Query: 376 EPTMEDARHQQESTIPAIRGATILEIGAGLGLLSIVAHRLGAKTIVATDFDSGDGLIGLLQKNIAENCQRPGQGHDRGHCSXXXXXXXXXXXGGKDETGNTRPMLHIFNLPWGDENALKKALEPFGGHLP---ELVLASDVLHLPELYPQLTATLRMACRDGSVTLLSCQQRNPAAEDGFVED-LAKDFAVARLHVSKDGRLAIF 978
E + R+ +E ++ +RG I+E+GAG G++ I+A RLGA + TD + LQ N++ N +G P + L WG+++ + P +LVL +D+++LPE YP L TL C++G+V LS + R GF E+ L F V +H + I+
Sbjct: 53 EAALHLCRYFEEQSVE-LRGKRIIELGAGTGVVGILAARLGAA-VTLTDLPLA---LPQLQANVSANMP---------------------------SSGWPSPPPTVLPLCWGEDHK----------NFPTDWDLVLCADIIYLPETYPLLVETLTHLCKNGAVVYLSSKMRKEHGTPGFYEECLPSRFNVKLVHRDDQQNINIY 215
BLAST of mRNA_P-wetherbeei_contig6835.2.1 vs. uniprot
Match: A0A6P8STR8_GYMAC (LOW QUALITY PROTEIN: EEF1A lysine methyltransferase 3-like n=2 Tax=Notothenioidei TaxID=8205 RepID=A0A6P8STR8_GYMAC) HSP 1 Score: 66.6 bits (161), Expect = 4.440e-9 Identity = 58/211 (27.49%), Postives = 93/211 (44.08%), Query Frame = 1
Query: 352 LSRWLCLMEPTMEDARHQQESTIPAIRGATILEIGAGLGLLSIVAHRLGAKTIVATDFDSGDGLIGLLQKNIAENCQRPGQGHDRGHCSXXXXXXXXXXXGGKDETGNTRPMLHI-FNLPWGDENALKKALEPFGGHLPELVLASDVLHLPELYPQLTATLRMACRDGSVTLLSCQQRNPAAEDGFVED-LAKDFAVARLHVSKDGRLAIF 978
LS LC + + +E ++ +RG I+E+GAG G++ I+A RLGA + TD + ++ LQ N++ N RP G N P+ H+ F+ W +LVL +D+++LPE +P L TL C++G+V LS + R GF E+ L + F V + D + I+
Sbjct: 56 LSGRLCRLIGRSGSGGYLEEQSVE-LRGQCIIELGAGTGVVGILAARLGA-VLTLTDLPT---VLPQLQANVSAN--RPSSGWPT-------------------SLPNVLPLDHMDFSSNW------------------DLVLCADIMYLPETFPLLKETLAHLCKNGAVAYLSSKMREEHETSGFFEEYLPRIFNVELVQHDDDQNINIY 222 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6835.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6835.2.1 >prot_P-wetherbeei_contig6835.2.1 ID=prot_P-wetherbeei_contig6835.2.1|Name=mRNA_P-wetherbeei_contig6835.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=309bp MTEITSEERDQGSSSDDDHVMEVLCTCKPCADGDMSPVAIDGDANAFILSback to top mRNA from alignment at P-wetherbeei_contig6835:878..2156- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6835.2.1 ID=mRNA_P-wetherbeei_contig6835.2.1|Name=mRNA_P-wetherbeei_contig6835.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1279bp|location=Sequence derived from alignment at P-wetherbeei_contig6835:878..2156- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6835:878..2156- >mRNA_P-wetherbeei_contig6835.2.1 ID=mRNA_P-wetherbeei_contig6835.2.1|Name=mRNA_P-wetherbeei_contig6835.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=927bp|location=Sequence derived from alignment at P-wetherbeei_contig6835:878..2156- (Phaeothamnion wetherbeei SAG_119_79)back to top |