mRNA_P-wetherbeei_contig6825.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: A0A835Z0Q0_9STRA (Organic solute transporter Ostalpha-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q0_9STRA) HSP 1 Score: 326 bits (836), Expect = 1.000e-101 Identity = 182/329 (55.32%), Postives = 219/329 (66.57%), Query Frame = 1
Query: 262 SVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFCCLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVA-----------------------------------------SLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNANDKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVARDDHDAP---PKTVLTRTFLVGNIDSP-LRKQPPRDFEVEKRADGAAHNRGGGSDN 1113
+V +LT+RD YEA VVYSF TLILEYAGGDY CTE IK LPPV HP P CCLP VRRDA LLR+ KQG +QFVVVKP+MA+ SLAAL G+YF A+Q LL++YN++YS ALYCL+L+YLAI+ LL +PVQKF AVK+IVF TFWQS+LV LLPG++ EQALLWN+F+LCVE VPF LLLNHAFP+ +F+ N DK+V +S+R ML+V DV +D +SF P YQ+YVVARDDHD P PKT RTFLVGN+DS +R PP A+G A GG D+
Sbjct: 70 AVVVLTLRDVYEAFVVYSFFTLILEYAGGDYNCTEQIKHLPPVRHPPPLCCLPAVRRDAHLLRMTKQGVVQFVVVKPVMALLRGTVWYVWVSIVVMCXXXXXXXXXXXXXXXXXXXXXXXXXLSLAALAGGLYFEPAFQAVLLIVYNITYSMALYCLLLFYLAIQTLLTPFQPVQKFFAVKAIVFATFWQSMLVYLLPGLTAEQALLWNNFLLCVECVPFALLLNHAFPFHDFMTNTADKRVADSMRTMLNVGDVFQDAYHSFMPSYQDYVVARDDHDNPLQQPKTFRARTFLVGNLDSEAMRGAPPA-------AEGGAQGEGGEGDS 391
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: D8LQ46_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ46_ECTSI) HSP 1 Score: 306 bits (785), Expect = 1.160e-95 Identity = 171/339 (50.44%), Postives = 223/339 (65.78%), Query Frame = 1
Query: 274 LTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFCCLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNANDKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVARDDHD------------APP----------KTVLTRTFLVGNIDSPLRKQPPRDFEVEKRADGAAHNRGGGSDNXXXXXXXXXXXGGADWADVQM-LDEDWSADVTVLEVE 1221
L +RDCYEA VVYSFLTLILE+AGGDY C E IK LPPV HP+P CCL VRRD LLRL KQ TLQFVVVKP MA+ SL AL G Y++ ++Q LLV+YN SYS ALY L+++Y A PLLA +PVQKF AVKSI+F T+WQ+V+V +PG+S+EQ LLWND+++C+E+V F LLLN AFP+ +F++ +DK VL +VR+M++V+DV +D +SF P YQ+YVVARDD D A P + V TRTFL+GN+D +P + + D + + GG + D D++ LDEDW DV V+E++
Sbjct: 80 LIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLCCLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQNVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDFIMEHHDKPVLENVREMINVRDVFQDAYHSFMPSYQDYVVARDDLDPNTPVAGGGGGVARPAXXSGGKKESRVVRTRTFLIGNLDRGNMSKPTLSTDGTQSTDESDNPAAGGGSHPAKGGRGRLS---VDDEDLEGGLDEDWGHDVNVIELQ 415
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: A0A7R9UBZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBZ1_9STRA) HSP 1 Score: 251 bits (640), Expect = 1.430e-75 Identity = 127/261 (48.66%), Postives = 169/261 (64.75%), Query Frame = 1
Query: 277 TIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFCCLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFV------VNANDKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVARDDHDAP-PKTVLTRTFLVGNIDSPLRK 1038
T+RD +EA ++Y+FL L+LEY GGD C ++IK P+ HP+P CCLPP+R+D LR CKQGTLQFV+VKP+M V L RG Y+ YQ LLVIYN+SY+ ALYCL+L+YLA LL H PV KF ++K++VF T+WQ V V+L PG+S E A WN+FILCVEMV F LL AF E+ + +K + S ++SVKD++ D ++F P YQ+YV+ D P +T+LVGN+D K
Sbjct: 100 TVRDMFEAFIIYTFLALVLEYCGGDLNCVDSIKHEAPLRHPFPLCCLPPLRKDGRFLRFCKQGTLQFVIVKPLMGVIGLITFSRGQYYRPEYQITLLVIYNISYTLALYCLLLFYLATHKLLEKHNPVLKFFSIKAMVFATYWQGVAVSLSPGISQEDATAWNNFILCVEMVVFSTLLLFAFGVEEYKRKNIEGLGVKNKDLWESFTDVISVKDLIADAYHNFVPAYQDYVLQSGTEDGDEPVRYRAKTYLVGNLDEDKMK 360
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: I2CPF2_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPF2_NANGC) HSP 1 Score: 240 bits (612), Expect = 2.480e-71 Identity = 130/259 (50.19%), Postives = 175/259 (67.57%), Query Frame = 1
Query: 259 TSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFCCLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNANDK-QVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVARDDHDAP--PKTVLTRTFLVGNIDS 1026
+SV + T+RD EA V+YSFL L+LEYAGGD C + IK PP+ H +P CL P+ RD LR+CKQGTLQFV VKP MA+ SL L +G++++R YQ ALLVIYN+SYS ALYCL L+Y K +L + PV KFLAVKS+VF T+WQS+L+ L G E+ WN+FILC+EMV F L AF + E+ + D VL++++++LSV+DV+ D ++F P YQ+Y + R D + + RTFL GN D+
Sbjct: 97 SSVGLETVRDMMEAFVIYSFLALVLEYAGGDSACVDRIKNEPPLRHFFPLGCLAPMPRDGRFLRVCKQGTLQFVFVKPTMALVSLIMLAKGLFWSRWYQAALLVIYNLSYSLALYCLALFYTGTKVILRRYSPVAKFLAVKSVVFATYWQSLLLLLWAG--PERVSAWNNFILCIEMVFFSTFLGLAFSHKEYRQSLPDNINVLHNMKEVLSVRDVVADAYHNFMPTYQDYTLHRHDGSSRGNQRKYRARTFLAGNFDA 353
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: A0A2D4CDP9_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDP9_PYTIN) HSP 1 Score: 229 bits (585), Expect = 1.930e-67 Identity = 117/243 (48.15%), Postives = 167/243 (68.72%), Query Frame = 1
Query: 250 YLSTSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFC-CLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNAN---DKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVARDD 966
+++ +++ T+RDCYEA VVYSFL L+L +AGG+ VC +++ P + H WP CL P+ RD LLR CK+ TLQFV++KP+ A+ SL L G Y T AYQ L V+YN+SYS ALY L L+YLA K +L PV KF AVKS++F TFWQS ++ +PG++ EQ+ W DF+LCVEMVPF LL AF ++F N + D +VL +++++LS+ D++ D ++F P YQ+Y++ R D
Sbjct: 43 FVNQALYFDTLRDCYEAFVVYSFLALVLSFAGGESVCVLKMQSEPDITHAWPLNRCLHPIARDGRLLRSCKRATLQFVLIKPLFALLSLFMLACGQYHTLAYQLILTVVYNISYSLALYGLWLFYLATKHILKTFNPVLKFFAVKSVIFLTFWQSGMIDFVPGITNEQSFAWKDFVLCVEMVPFALLHFLAFNPSQFKKNLDRLPDSEVLKNMKEVLSLSDIIADAYHNFMPSYQDYMLQRAD 285
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: G4ZK83_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZK83_PHYSP) HSP 1 Score: 229 bits (585), Expect = 7.550e-66 Identity = 118/241 (48.96%), Postives = 165/241 (68.46%), Query Frame = 1
Query: 250 YLSTSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFC-CLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNAN---DKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVAR 960
+++ +++ +IRDCYEA VVYSFL L+L +AGG+ VC +++ P + HPWP C PV RD LLRLCK+ T+QFV +KPI A SL L G Y T AYQ L+V+YN+SYS ALY L L+YLA + +L PV KF AVKS+VF TFWQ+ L+ +PG++ EQ W DFILCVEMVPF + AF ++F N + D +VLN+++++LS+ D+L D ++F P Y++Y++ R
Sbjct: 94 FVNQALYFDSIRDCYEAFVVYSFLALVLSFAGGESVCVLKMQSEPDIRHPWPLSRCFEPVGRDGRLLRLCKRATIQFVFIKPIFAALSLLMLACGKYHTLAYQLILVVVYNISYSVALYGLWLFYLATRHILQPFNPVLKFFAVKSVVFLTFWQNSLLDFIPGITNEQTFAWKDFILCVEMVPFAFVHLLAFNSSQFKKNLDRLPDSEVLNNMKEVLSLSDILADAYHNFMPSYRDYMLQR 334
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: K3WXL2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXL2_GLOUD) HSP 1 Score: 228 bits (581), Expect = 2.460e-65 Identity = 118/244 (48.36%), Postives = 165/244 (67.62%), Query Frame = 1
Query: 247 LYLSTSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFC-CLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNAN---DKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVARDD 966
++++ +++ T RDCYEA VVYSFL L+L +AGG+ VC ++ P + H WP CL P+ RD LLR CK+ T+QFV++KP A+ SL L G Y+T AYQ L ++YN+SYS ALY L L+YLA K +L PV KF AVKSIVF TFWQS L+ +PG++ EQ+ W DFILCVEMVPF L AF ++F N + D +VL +++++LS+ D++ D ++F P YQ+YV+ R +
Sbjct: 91 IFVNQALYFDTFRDCYEAFVVYSFLALVLSFAGGESVCVVKMQGEPDITHAWPLSRCLRPIGRDGRLLRSCKRATIQFVLIKPFFALLSLVMLAFGQYYTLAYQLILEIVYNISYSLALYGLWLFYLATKHILKTFNPVLKFFAVKSIVFLTFWQSGLIDFVPGITNEQSFAWKDFILCVEMVPFAFLHFLAFNPSQFKKNLDRLPDSEVLKNMKEVLSLSDLVADAYHNFMPSYQDYVLQRGE 334
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: H3GYJ3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYJ3_PHYRM) HSP 1 Score: 226 bits (576), Expect = 1.390e-64 Identity = 134/296 (45.27%), Postives = 180/296 (60.81%), Query Frame = 1
Query: 85 IGEFSRASLEASSVGMSFLVALVFPLWDQPSLLCLPRYA*PISFVTLAPSPSPYLYLSTSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFC-CLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNAN---DKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVAR 960
+ +SR L+ V + +V P++ SLL L SFV A LY + IRDCYEA VVYSFL L+L +AGG+ VC +++ P + HPWP CL P+ RD LLRLCK+ T+QFV VKPI A SL L G Y T AYQ L+V+YNVSYS ALY L ++YLA + +L PV KF AVKS+VF TFWQS L+ +PG++ EQ W D ILCVEMVPF + AF +F N + D +VL +++++LS+ D+L D ++F P Y++Y++ R
Sbjct: 62 LAHYSRPQLQRYIVR----ILVVVPVYALGSLLSL-------SFVNQA------LYFDS------IRDCYEAFVVYSFLALVLSFAGGESVCVLKMQSEPDIRHPWPLSRCLDPLGRDGRLLRLCKRATIQFVFVKPIFAALSLLMLACGKYHTLAYQLILVVVYNVSYSLALYGLWIFYLATRHILQPFNPVLKFFAVKSVVFLTFWQSSLLDFIPGITNEQTFAWKDLILCVEMVPFAFVHLLAFNSNQFKKNLDRLPDSEVLKNMKEVLSLSDILADAYHNFMPSYRDYMLQR 334
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: A0A3F2RFZ8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFZ8_9STRA) HSP 1 Score: 225 bits (573), Expect = 3.820e-64 Identity = 117/241 (48.55%), Postives = 165/241 (68.46%), Query Frame = 1
Query: 250 YLSTSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFC-CLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNAN---DKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVAR 960
+++ +++ +IRDCYEA VVYSFL L+L +AGG+ VC ++ P + HPWP CL PV RD LLR CK+ TLQFV +KPI A SL L G Y T AYQ L+V+YN+SYS ALY L ++YLA K +L PV KF AVKS+VF TFWQS L++ +PG++ EQ+ W DFILC+EMVPF ++ AF +F N + D +VL +++++LS+ D++ D ++F P Y++Y++ R
Sbjct: 94 FVNQALYFDSIRDCYEAFVVYSFLALVLSFAGGESVCVLKMQGEPDIRHPWPLNRCLDPVGRDGRLLRSCKRATLQFVFIKPIFAALSLLMLACGKYHTLAYQLILVVVYNISYSMALYGLWVFYLATKHILQPFNPVIKFFAVKSVVFLTFWQSSLLSFVPGITNEQSFAWKDFILCLEMVPFAVIHLAAFNSNQFKKNLDRLPDSEVLKNMKEVLSLSDIVADAYHNFMPSYRDYMLQR 334
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: D0P033_PHYIT (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0P033_PHYIT) HSP 1 Score: 225 bits (573), Expect = 6.400e-64 Identity = 129/323 (39.94%), Postives = 190/323 (58.82%), Query Frame = 1
Query: 4 HELRNTYFAFSA*CRSTRYAVAFLSASIGEFSRASLEASSVGMSFLVALVFPLWDQPSLLCLPRYA*PISFVTLAPSPSPYLYLSTSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFC-CLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNAN---DKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVAR 960
H + AF +T +V + + +SR L+ V + ++ P++ SLL L ++++ +++ +IRDCYEA VVYSFL L+L +AGG+ VC +++ P + HPWP C P+ RD LLRLCK+ T+QFV +KPI A SL L G Y T AYQ L V+YN+SYS ALY L ++YLA + +L PV KF AVKS+VF TFWQ+ L+ +PG++ EQ W DFILCVEMV F + AF ++F N + D +VLN+++++LS+ D+L D ++F P Y++Y++ R
Sbjct: 53 HRASSLLIAFGCCVLATLLSVYNIVQHLAHYSRPQLQRYIVR----ILVIVPVYAMGSLLSL-------------------MFVNQALYFDSIRDCYEAFVVYSFLALVLSFAGGESVCVLKMQSEPDIRHPWPINRCFDPLGRDGRLLRLCKRATIQFVFIKPIFAALSLLMLACGKYHTLAYQLILAVVYNISYSLALYGLYIFYLATRHILQPFNPVLKFFAVKSVVFLTFWQNSLLDFIPGITNEQTFAWKDFILCVEMVLFAFVHLLAFNSSQFKKNLDRLPDSEVLNNMKEVLSLSDILADAYHNFMPSYKDYMLQR 352 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6825.1.1 >prot_P-wetherbeei_contig6825.1.1 ID=prot_P-wetherbeei_contig6825.1.1|Name=mRNA_P-wetherbeei_contig6825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=298bp MAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAback to top mRNA from alignment at P-wetherbeei_contig6825:554..3255+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6825.1.1 ID=mRNA_P-wetherbeei_contig6825.1.1|Name=mRNA_P-wetherbeei_contig6825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2702bp|location=Sequence derived from alignment at P-wetherbeei_contig6825:554..3255+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6825:554..3255+ >mRNA_P-wetherbeei_contig6825.1.1 ID=mRNA_P-wetherbeei_contig6825.1.1|Name=mRNA_P-wetherbeei_contig6825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=894bp|location=Sequence derived from alignment at P-wetherbeei_contig6825:554..3255+ (Phaeothamnion wetherbeei SAG_119_79)back to top |