mRNA_P-wetherbeei_contig6805.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6805.2.1 vs. uniprot
Match: A0A3C1L5H3_9ACTN (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A3C1L5H3_9ACTN) HSP 1 Score: 249 bits (636), Expect = 2.750e-75 Identity = 157/283 (55.48%), Postives = 192/283 (67.84%), Query Frame = 1
Query: 1 GPGLLSTAFGLGAFASIAVAARVTRRPRLAPALLAALAAAAACLLLFGVALTVPIALIVLPVLGLSRSMFDGPSRLLLQRSSGPEALGSTFAIRELCASAGLITGSVFALIALEVGDPEHVLVALGGAFVLLLLLTARGLRMADAAADVPVVEMSLLRRLPMFASLPPIALEAVARAATAVAVQAGEVVITQGEQGDEFFAVVDGAFDIDMSGKRMRTAERLSFFGEVALLADVPRTATVTAARAGTLLSVGRVDFLMAVTGTDSSLQAAWGVVRALTLESEV 849
G G+L+T FG GAF SI VA R RRPRLAP +L ALA A + FG +T+ +A + LPVLG SRS+ D +R+LLQRS+ P L S F E + GLI GS+ A + V LV +G + +L + R LR AD ADVPVV MSLL RLP+FA LP +ALEAVAR+A + V AGEVVI QG+ GD F+AV DGAFD+ MS MRT R FGEVALLADVPRTATVTA + G LL++ R FL+AVTG DSS QAAWGVVR++T ++E+
Sbjct: 283 GAGILTTMFGAGAFLSIGVAGRAVRRPRLAPQMLLALALIATACIAFGANITLLMAGLALPVLGCSRSLLDLMARVLLQRSAPPSQLASVFGALETSSGIGLIAGSLLAQTLIAVSGASVALVGVGCVYGVLAVSLIRPLRSADDGADVPVVAMSLLHRLPVFAPLPTLALEAVARSAIELPVAAGEVVIHQGDSGDRFYAVADGAFDVVMSAVLMRTVRRGEGFGEVALLADVPRTATVTATQPGHLLAIERGPFLIAVTGHDSSRQAAWGVVRSMTFDNEL 565
BLAST of mRNA_P-wetherbeei_contig6805.2.1 vs. uniprot
Match: A0A7X9KLI8_9ACTN (MFS transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KLI8_9ACTN) HSP 1 Score: 197 bits (502), Expect = 7.630e-56 Identity = 134/283 (47.35%), Postives = 171/283 (60.42%), Query Frame = 1
Query: 1 GPGLLSTAFGLGAFASIAVAARVTRRPRLAPALLAALAAAAACLLLFGVALTVPIALIVLPVLGLSRSMFDGPSRLLLQRSSGPEALGSTFAIRELCASAGLITGSVFALIALEVGDPEHVLVALGGAFVLLLLLTARGLRMADAAADVPVVEMSLLRRLPMFASLPPIALEAVARAATAVAVQAGEVVITQGEQGDEFFAVVDGAFDIDMSGKRMRTAERLSFFGEVALLADVPRTATVTAARAGTLLSVGRVDFLMAVTGTDSSLQAAWGVVRALTLESEV 849
GPGLLS G GA S+ + V RR +L AL L A AA L+ FG + P+A +VLP+LG+ S + SR+LLQRS+ P +LG FA L + G A + + L+ G V++ L T R LR AD+ ADVPVVEM+LL LPMFA LP LE VAR+A V + +GE VI QG+ GD F+AV DG FDIDM+G +RTA R FFGEVALL +V RTATV A G LL++ R FL+A+TG + S AA V +L LE ++
Sbjct: 250 GPGLLSALVGAGAVVSMLLVTFVVRRAQLRRALTGGLVATAAMLVGFGFFTSAPVAFVVLPLLGMCLSSMENLSRMLLQRSTDPRSLGPLFACLGLVGGIAQVAGVGIAQGLMALAGLHAALIGTGVVLVVIALATTRALRDADSHADVPVVEMALLSGLPMFAPLPAATLEMVARSAERVKIASGEAVIRQGDSGDVFYAVADGEFDIDMNGVYLRTAPRGDFFGEVALLTNVTRTATVRARTDGELLAIHRDPFLLAITGHEVSHAAATAYVDSLDLEEKM 532
BLAST of mRNA_P-wetherbeei_contig6805.2.1 vs. uniprot
Match: A0A3C2B1J4_9ACTN (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B1J4_9ACTN) HSP 1 Score: 189 bits (480), Expect = 1.240e-52 Identity = 132/283 (46.64%), Postives = 172/283 (60.78%), Query Frame = 1
Query: 1 GPGLLSTAFGLGAFASIAVAARVTRRPRLAPALLAALAAAAACLLLFGVALTVPIALIVLPVLGLSRSMFDGPSRLLLQRSSGPEALGSTFAIRELCASAGLITGSVFALIALEVGDPEHVLVALGGAFVLLLLLTARGLRMADAAADVPVVEMSLLRRLPMFASLPPIALEAVARAATAVAVQAGEVVITQGEQGDEFFAVVDGAFDIDMSGKRMRTAERLSFFGEVALLADVPRTATVTAARAGTLLSVGRVDFLMAVTGTDSSLQAAWGVVRALTLESEV 849
GPGLLS G GA S+ V RR RL AL + +AA L+L GV P+ + LP+LG+ S + SR+LLQRS+ P LG FA L + G+ + + E LV +GG +L LLT+R L ADA A VPVVEMSLL +LP+FA L +LEAVARAA V AG+V+I QG++GD F+AVV G FDIDM+G +R+A + FFGEVALL D PRTATVTA G +L + R FL+A+TG +++ AA V + LE ++
Sbjct: 252 GPGLLSGLVGGGAALSVVVITAAVRRARLRRALSVGIVVSAALLVLLGVVTERPVVFVALPLLGVCLSAMENLSRMLLQRSTDPRRLGPLFAGFGLVGGLSQLAGAGLGQVVTALVGAETGLVVVGGVLAVLALLTSRALGDADAHASVPVVEMSLLSKLPLFAPLHAASLEAVARAAEHQQVVAGDVLIRQGDRGDVFYAVVTGEFDIDMNGVFIRSAPQGDFFGEVALLNDSPRTATVTARTNGEMLVIHREPFLVAITGHEAAHAAATTYVVEMDLEEKM 534
BLAST of mRNA_P-wetherbeei_contig6805.2.1 vs. uniprot
Match: A0A7K0ZV96_9ACTN (Cyclic nucleotide-binding domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K0ZV96_9ACTN) HSP 1 Score: 186 bits (471), Expect = 2.080e-51 Identity = 118/276 (42.75%), Postives = 169/276 (61.23%), Query Frame = 1
Query: 1 GPGLLSTAFGLGAFASIAVAARVTRRPRLAPALLAALAAAAACLLLFGVALTVPIALIVLPVLGLSRSMFDGPSRLLLQRSSGPEALGSTFAIRELCASAGLITGSVFALIALEVGDPEHVLVALGGAFVLLLLLTARGLRMADAAADVPVVEMSLLRRLPMFASLPPIALEAVARAATAVAVQAGEVVITQGEQGDEFFAVVDGAFDIDMSGKRMRTAERLSFFGEVALLADVPRTATVTAARAGTLLSVGRVDFLMAVTGTDSSLQAAWGVVRA 828
G G+LS AFG+GA + ++ R LA L+ AL A + L GV T+ + L+ LP+ G+SRS+ D R+LLQRS+ +A+ S FA+ E+ A G++TGS+ + + V E ++ +G F ++ +L A GLR ADA ADVPVV++ LLR +P+FASLP + EA+AR + V GE ++ QGE GD++ + DG ++ + G+ +RT R GE+ALLAD+PRTATV A + L V R FL AV G D+S AW V RA
Sbjct: 250 GSGILSAAFGVGAVLGGLASTQLVARAHLARVLIGALVVVALAMGLLGVWTTLAVTLVALPLAGISRSLLDVTGRMLLQRSAPQDAVASVFAVLEVLAGIGILTGSLLVQLLVAVSGTESAVLGVGVLFAIVTVLCAAGLRHADAHADVPVVQIRLLRSVPLFASLPALETEALARRSLLVERADGEALMRQGEPGDQYVVIADGTVEVTIDGRPIRTMGRGEGLGEIALLADIPRTATVVAQGPVSTLVVERSAFLDAVVGHDASADLAWSVARA 525
BLAST of mRNA_P-wetherbeei_contig6805.2.1 vs. uniprot
Match: A0A7W1JY89_9ACTN (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1JY89_9ACTN) HSP 1 Score: 149 bits (376), Expect = 1.020e-37 Identity = 110/262 (41.98%), Postives = 143/262 (54.58%), Query Frame = 1
Query: 1 GPGLLSTAFGLGAFASIAVAARVTRRPRLAPALLAALAAAAACLLLFGVALTVPIALIVLPVLGLSRSMFDGPSRLLLQRSSGPEALGSTFAIRELCASAGLITGSVFALIALEVGDPEHVLVALGGAFVLLLLLTARGLRMADAAADVPVVEMSLLRRLPMFASLPPIALEAVARAATAVAVQAGEVVITQGEQGDEFFAVVDGAFDIDMSGKRMRTAERLSFFGEVALLADVPRTATVTAARAGTLLSVGRVDFLMAVTG 786
G G L+ AFG G + + RPRLAP LLAA+A ++ G+ T A ++L V G +R++ D R LLQR++ P LG F + E + AGL GS+ + +V LG + +LTA L + D A VPVVE+ LLR LP+FASL LEA+ARA AV G+ VI +G+ GD F+ V DG + RT R FGE+ALL DVPRTATVT+A L S+ R FL AVTG
Sbjct: 260 GAGYLNAAFGAGGVIGVIATVALIGRPRLAPPLLAAVAVWWVAFVVLGIHPTTAAAFVLLVVAGAARTVVDVAGRTLLQRAARPRVLGRIFGVLEGLSMAGLAVGSLLTPALVAAFGGRAAIVCLGCVLPIAAVLTAHRLLVIDRTATVPVVELGLLRSLPLFASLGAPQLEALARALVAVPCARGDCVIREGDPGDLFYVVADGELAVSAG----RTLRRGDCFGEIALLRDVPRTATVTSATEVRLYSLAREPFLEAVTG 517
BLAST of mRNA_P-wetherbeei_contig6805.2.1 vs. uniprot
Match: A0A7Y3P498_9ACTN (MFS transporter n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7Y3P498_9ACTN) HSP 1 Score: 136 bits (343), Expect = 6.980e-33 Identity = 102/274 (37.23%), Postives = 155/274 (56.57%), Query Frame = 1
Query: 1 GPGLLSTAFGLGAFASIAVAARVTRRPRLAPALLAALAAAAACLLLFGVALTVPIALIVLPVLGLSRSMFDGPSRLLLQRSSGPEALGSTFAIRELCASAGLITGSVFALIALEVGDPEHVLVALGGAFVLLLLLTARGLRMADAAADVPVVEMSLLRRLPMFASLPPIALEAVARAATAVAVQAGEVVITQGEQGDEFFAVVDGAFDIDMSGKRMRTAERLSFFGEVALLADVPRTATVTAARAGTLLSVGRVDFLMAVTGTDSSLQAAWGVV 822
G G L+ G GA + V + R R+A + LA + A L + GV +V +++L +G+ ++F ++ LLQRS +++ +F+I E + GL G+VF +AL +G + L VLLL T R LR D A VP VE+ LLR + +FASLP A+EA+AR ++A AG VV+ +G++GD ++AV DG + G+ +R R FGE+AL+ DVPR ATVTA LL + ++ F+ A+TG S+ AA ++
Sbjct: 289 GAGFLNATLGGGALLAGFVTPFLVGRRRIANTMALTLALSVAGLAVIGVVRSVDPVVLLLGAVGMFGTVFSVSAQTLLQRSVPSDSVAGSFSIVESLFNLGLALGAVFVRVALAIGGLKLALFMPAAIAVLLLGGTWRQLRKIDLAVTVPQVEIQLLRSIRIFASLPAPAIEALARGVASIAKPAGAVVVAEGQRGDCYYAVADGELSVTRRGQNVRVLSRGGGFGELALIRDVPRQATVTALTQVLLLRIDKIPFIEALTGHPSAALAAEDII 562
BLAST of mRNA_P-wetherbeei_contig6805.2.1 vs. uniprot
Match: A0A7V9Q0E4_9ACTN (MFS transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9Q0E4_9ACTN) HSP 1 Score: 132 bits (332), Expect = 1.900e-31 Identity = 102/276 (36.96%), Postives = 146/276 (52.90%), Query Frame = 1
Query: 1 GPGLLSTAFGLGAFASIAVAARVTRRPRLAPALLAALAAAAACLLLFGVALTVPIALIVLPVLGLSRSMFDGPSRLLLQRSSGPEALGSTFAIRELCASAGLITGSVFALIALEVGDPEHVLVALGGAFVLLLLLTARGLRMADAAADVPVVEMSLLRRLPMFASLPPIALEAVARAATAVAVQAGEVVITQGEQGDEFFAVVDGAFDIDMSGKRMRTAERLSFFGEVALLADVPRTATVTAARAGTLLSVGRVDFLMAVTGTDSSLQAAWGVVRA 828
G G L++A G+GA +A + RL+PA + L L+L G+ T +AL++L ++G S+ D L+QR+ E L F + + A G + + ++ + LV G +L LLT R L DAAA+ P +SLLR +P+FA LP LE +A + V AG VV+ QG+ GD F+ VV+G DI + G+ + +FGE+AL+ DVPRTAT TA A L ++ R DFL AVTG S +AA V A
Sbjct: 269 GVGFLNSAIGVGALIGSIIAISLAGMRRLSPAFIGGLVLWGIPLVLIGLWSTPALALVLLAIVGAGNSLVDVALFTLIQRAVPDEVLARVFGVIQFLWIATFGLGGIIVVPLVDWLGADGALVVAGAFLPVLALLTGRHLYRLDAAAEAPGPGLSLLRSIPIFAPLPGTPLEHLAARLVPLRVDAGTVVVRQGDSGDRFYVVVEGEVDIAVDGETVSELGPGGYFGEIALIRDVPRTATATARTAVVLYALEREDFLAAVTGHAPSAEAAEHVASA 544
BLAST of mRNA_P-wetherbeei_contig6805.2.1 vs. uniprot
Match: A0A538HQ23_9ACTN (MFS transporter (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538HQ23_9ACTN) HSP 1 Score: 123 bits (308), Expect = 1.490e-29 Identity = 98/277 (35.38%), Postives = 150/277 (54.15%), Query Frame = 1
Query: 1 GPGLLSTAFGLGAFASIAVAARVTRRPRLAPALLAALAAAAACLLLFGVALTVPIALIVLPVLGLSRSMFDGPSRLLLQRSSGPEALGSTFAIRELCASAGLITGSVFALIALEVGDPEHVLVALGGAFVLLLLLTARGLRMADAAADVP-VVEMSLLRRLPMFASLPPIALEAVARAATAVAVQAGEVVITQGEQGDEFFAVVDGAFDIDMSGKRMRTAERLSFFGEVALLADVPRTATVTAARAGTLLSVGRVDFLMAVTGTDSSLQAAWGVVRA 828
G G L++A G+GA VA +T RL+ + L+L G + +AL +L ++G+ S+ D + L+QR+ E L F + ++ L G++ A + LVA G A V+L+ L R LR DA A P E+ +L +P+FA LP ++LE +A + V +G V++ QG++GD F+ +V+G ++ GK + + + +FGE+ALL D+PRTATVTA+ L ++ R DFL AVTG S QAA VV A
Sbjct: 18 GVGFLNSAMGVGALLGGVVALSLTGSSRLSLPFAVGVLGWGVPLILLGSHPEMAVALALLAIVGVGNSIMDVAAFTLVQRAVADEVLARVFGVIQMLWWLALAFGALVAPALVGWLGIRTALVATGSALVVLVALLWRPLRAIDARAVAPEATELRILASVPIFAPLPGMSLEHLAGRLVPLRVDSGTVIVRQGDEGDRFYMLVEGKVEVSEDGKPISSLDAGGYFGEIALLRDLPRTATVTASTPVVLYALDRDDFLAAVTGHAPSAQAAEDVVSA 294
BLAST of mRNA_P-wetherbeei_contig6805.2.1 vs. uniprot
Match: A0A537TUY3_9ACTN (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537TUY3_9ACTN) HSP 1 Score: 123 bits (308), Expect = 1.310e-28 Identity = 101/274 (36.86%), Postives = 140/274 (51.09%), Query Frame = 1
Query: 1 GPGLLSTAFGLGAFASIAVAARVTRRPRLAPALLAALAAAAACLLLFGVALTVPIALIVLPVLGLSRSMFDGPSRLLLQRSSGPEALGSTFAIRELCASAGLITGSVFALIALEVGDPEHVLVALGGAFVLLLLLTARGLRMADAAADVPVVEMSLLRRLPMFASLPPIALEAVARAATAVAVQAGEVVITQGEQGDEFFAVVDGAFDIDMSGKRMRTAERLSFFGEVALLADVPRTATVTAARAGTLLSVGRVDFLMAVTGTDSSLQAAWGVV 822
G G L +A G+G A A + R RLA A + + L V ALI+ V+GL+ ++ D LLQRS E LG F + E A + G++ A + + LVA G +++ LT R L DA A P E+ L+R LP+FA LP LE +A + VA AG V+ QG+ GD F+ V G + + G T E+ FGE+ALL DVPR+ATVTA LL++ R +F+ AVTG +S +AA V+
Sbjct: 154 GVGYLFSAVGIGGVLGAAAAVALIGRRRLAAAFGVGVVFWGTPIALVAVFPHTAAALILFAVIGLANTIVDVAGLTLLQRSVPGEVLGRVFGVLESIILATVALGAILAPVLVSGLGIRGALVAAGVFLPIVVALTWRPLAAMDADASPPAQELDLVRNLPLFAPLPGPVLEHLAASLVPVAAPAGTTVVRQGDSGDRFYVVAGGRLAVSVDGVPAGTLEQGDHFGEIALLRDVPRSATVTAEADAELLALERDEFIAAVTGHAASAEAADAVI 427
BLAST of mRNA_P-wetherbeei_contig6805.2.1 vs. uniprot
Match: A0A1Q6XFD9_9ACTN (Cyclic nucleotide-binding domain-containing protein n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A1Q6XFD9_9ACTN) HSP 1 Score: 124 bits (310), Expect = 2.000e-28 Identity = 99/274 (36.13%), Postives = 147/274 (53.65%), Query Frame = 1
Query: 1 GPGLLSTAFGLGAFASIAVAARVTRRPRLAPALLAALAAAAACLLLFGVALTVPIALIVLPVLGLSRSMFDGPSRLLLQRSSGPEALGSTFAIRELCASAGLITGSVFALIALEVGDPEHVLVALGGAFVLLLLLTARGLRMADAAADVPVVEMSLLRRLPMFASLPPIALEAVARAATAVAVQAGEVVITQGEQGDEFFAVVDGAFDIDMSGKRMRTAERLSFFGEVALLADVPRTATVTAARAGTLLSVGRVDFLMAVTGTDSSLQAAWGVV 822
G G L++A G+GA A I V + RL+ + L++ G+ +V +AL+ ++G+ + D LLQR++ + F + E A + G+V A + + P LVA GG +++LL R L DA A VP E++LLR +P+FA LPP+ LE +A + V V AG+VV +G+ GD F+ V G ++ G+ T R +FGE+ALL DVPRTATVTA L ++ R F+ AVTG S +AA V+
Sbjct: 268 GVGFLNSADGVGALAGILVLLGMITTARLSGVFGLGILMWGVPLIVLGIWPSVLLALLCFGIIGVGNVLVDVAGLTLLQRTAPDKVRARVFGVFESVFLATIGIGAVVAPLLMYAFGPRGALVAAGGGLSVVVLLFWRRLATVDAPALVPERELALLRDIPIFAPLPPVTLEQLASNLSHVRVAAGDVVFREGDHGDRFYVVEKGEVTVEPEGRPPLTLGRGGYFGEIALLRDVPRTATVTALSDVELWALERDIFIAAVTGHAPSAEAADAVI 541 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6805.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6805.2.1 >prot_P-wetherbeei_contig6805.2.1 ID=prot_P-wetherbeei_contig6805.2.1|Name=mRNA_P-wetherbeei_contig6805.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=286bp GPGLLSTAFGLGAFASIAVAARVTRRPRLAPALLAALAAAAACLLLFGVAback to top mRNA from alignment at P-wetherbeei_contig6805:2437..3294- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6805.2.1 ID=mRNA_P-wetherbeei_contig6805.2.1|Name=mRNA_P-wetherbeei_contig6805.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig6805:2437..3294- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6805:2437..3294- >mRNA_P-wetherbeei_contig6805.2.1 ID=mRNA_P-wetherbeei_contig6805.2.1|Name=mRNA_P-wetherbeei_contig6805.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig6805:2437..3294- (Phaeothamnion wetherbeei SAG_119_79)back to top |