mRNA_P-wetherbeei_contig6780.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6780.1.3
Unique NamemRNA_P-wetherbeei_contig6780.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6780.1.3 vs. uniprot
Match: D7FQT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT9_ECTSI)

HSP 1 Score: 495 bits (1274), Expect = 5.670e-164
Identity = 270/414 (65.22%), Postives = 295/414 (71.26%), Query Frame = 2
Query:  770 PPALELNGASE-PSLDTHSRGSSGDEANAAGSKGAHVEVAVFKYQPGNQAPVENLQNYRISQRGAALTGGLGDSGHSRASRGSDXGGGASGRVDIATEYEKRKGAAVDRHHIQDHRAKQLLVVPSDDKFVAVAAPEAFSRHSGTCMILGGQGAYSHGSSKSYELKLGNFLRIGSVGVVVSEIHTGTASGVAAAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGEYKCLSWEELTCLKGDIAAIQKDLVTLEALTAQEEDSQ--KLAKAXXXXXXXXXXXXXXXGKMCYMCFDDADDADNPLVAPCECKGDTRYVHLNCLQKWHTTSSENKVCVILNNKGVRVCTVCKSPYKASVRLPGGESVSLFQSPLPPPYICFMVVTRHQNNEDLFSTKYQLSFSSVLNR 2002
            PP  + +G+ E P L      SSG +      KGAHVEV+VFKYQPG Q PVE L NYRIS RG A+TG L  +   R           SG VDIA EYEKRKG+ V RHHI+DHRAKQLLVVP+DDKFVAVAAPEAFSRHSGTCMILGGQGAY +G+SKSYELKLGNFLRIGSVGVVVSEIHTG                                                GE+KCLSWEELTCLKGDIAAIQKDLVT+EALTAQEE+++  KL                   +MCYMCFDD D+  NPLVAPCECKGDTRYVHLNCLQKWHTT+SENKVCV+LNNKGVRVCTVCKSPYKASVRLPGGES+SLFQSPLPPPYICFMVVTRHQNNE+LFSTKYQLSF+SV+NR
Sbjct:  176 PPLNDPSGSEEAPRLSGRGSPSSGGDH-----KGAHVEVSVFKYQPGVQTPVEQLHNYRISSRGGAITGSLTQTEERRGEN-------VSGSVDIAAEYEKRKGSQVVRHHIKDHRAKQLLVVPNDDKFVAVAAPEAFSRHSGTCMILGGQGAYGNGTSKSYELKLGNFLRIGSVGVVVSEIHTGA----------------------------------------------GGEHKCLSWEELTCLKGDIAAIQKDLVTIEALTAQEENAEADKLTGVLQNGGGGVVNT-----RMCYMCFDDVDEPGNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNR 526          
BLAST of mRNA_P-wetherbeei_contig6780.1.3 vs. uniprot
Match: A0A836C9Y1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y1_9STRA)

HSP 1 Score: 476 bits (1225), Expect = 1.210e-157
Identity = 263/389 (67.61%), Postives = 288/389 (74.04%), Query Frame = 2
Query:  851 AAGSKGAHVEVAVFKYQPGNQAPVENLQNYRISQRGAALTGGL-----GDSGHSRASRGSDXGGGASGRVDIATEYEKRKGAAVDRHHIQDHRAKQLLVVPSDDKFVAVAAPEAFSRHSGTCMILGGQGAYSHGSSKSYELKLGNFLRIGSVGVVVSEIHTGTASGVAAAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGEYKCLSWEELTCLKGDIAAIQKDLVTLEALTAQEEDSQKLAKAXXXXXXXXXXXXXXXGKMCYMCFDDADDADNPLVAPCECKGDTRYVHLNCLQKWHTTSSENKVCVILNNKGVRVCTVCKSPYKASVRLPGGESVSLFQSPLPPPYICFMVVTRHQNNEDLFSTKYQLSFSSVLNR 2002
            AAG +GAHV+V+VFKYQPG Q P+EN QNYRI+ RGAALTGGL                  X    SG VDI  EYE+RKG  V+RH I+DHRAKQLLVVP+DDKFVAVAAPEAFSRHSGTCMILGGQGAYS+G +K+YEL++G+FLRIGSVGVVVSE HTG                                                G +KCLSWEELTCLKGDIAAIQKDLVTLEALTAQEE     A +     XXXXXXXXX  KMCYMCFDD D+ADNPLVAPC+CKGDTRYVHL CLQKWHTT+ ENKVCV+LNNKGVRVCTVCKSPYKASVRLP G+SVSLF+SPLPPPYICFMVVT+HQNNEDLFSTKYQLSFSSV+NR
Sbjct:   78 AAGGRGAHVDVSVFKYQPGVQTPMENFQNYRINLRGAALTGGLMAPAXXXXXXXXXXXXXXXXXAMSGTVDIVGEYERRKGTPVERHFIKDHRAKQLLVVPNDDKFVAVAAPEAFSRHSGTCMILGGQGAYSNGPNKAYELRVGSFLRIGSVGVVVSETHTGP----------------------------------------------GGVHKCLSWEELTCLKGDIAAIQKDLVTLEALTAQEEGGMTHASSPASTGXXXXXXXXXDRKMCYMCFDDEDEADNPLVAPCDCKGDTRYVHLGCLQKWHTTTLENKVCVVLNNKGVRVCTVCKSPYKASVRLPTGDSVSLFESPLPPPYICFMVVTKHQNNEDLFSTKYQLSFSSVVNR 420          
BLAST of mRNA_P-wetherbeei_contig6780.1.3 vs. uniprot
Match: A0A835ZD25_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD25_9STRA)

HSP 1 Score: 421 bits (1081), Expect = 6.450e-138
Identity = 228/326 (69.94%), Postives = 247/326 (75.77%), Query Frame = 2
Query: 1025 GGASGRVDIATEYEKRKGAAVDRHHIQDHRAKQLLVVPSDDKFVAVAAPEAFSRHSGTCMILGGQGAYSHGSSKSYELKLGNFLRIGSVGVVVSEIHTGTASGVAAAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGEYKCLSWEELTCLKGDIAAIQKDLVTLEALTAQEEDSQKLAKAXXXXXXXXXXXXXXXGKMCYMCFDDADDADNPLVAPCECKGDTRYVHLNCLQKWHTTSSENKVCVILNNKGVRVCTVCKSPYKASVRLPGGESVSLFQSPLPPPYICFMVVTRHQNNEDLFSTKYQLSFSSVLNR 2002
            G A G VDIA EYE+RKG  ++RH I+DHRAKQLLVVPSDDKFVAVAAPEAFSRHSGTCMILGGQGAY+ G SKSYEL++G+ LRIGSVGVVVSE HTG                                                GE+KCLSWEELTCLKGDIAAIQKDLVT+EALTAQEE     A +     XXXXXXXX   KMCYMCFDD D+  NPLVAPC+CKGDTRYVHL CLQ+WHTT+SENKVCV+LNNKGVRVCTVCKSPYK SVRLP GES+SLFQSPLPPPYICFMVVT+HQNNEDLFSTKYQLSFSSV+NR
Sbjct:   17 GDAPGTVDIAGEYERRKGVPLERHFIKDHRAKQLLVVPSDDKFVAVAAPEAFSRHSGTCMILGGQGAYAAGPSKSYELRVGSLLRIGSVGVVVSETHTGP----------------------------------------------GGEHKCLSWEELTCLKGDIAAIQKDLVTVEALTAQEEGGLTNASSPASFAXXXXXXXXDR-KMCYMCFDDEDEPANPLVAPCDCKGDTRYVHLGCLQRWHTTTSENKVCVVLNNKGVRVCTVCKSPYKPSVRLPTGESISLFQSPLPPPYICFMVVTKHQNNEDLFSTKYQLSFSSVVNR 295          
BLAST of mRNA_P-wetherbeei_contig6780.1.3 vs. uniprot
Match: A0A6H5JU93_9PHAE (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU93_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 8.540e-88
Identity = 157/257 (61.09%), Postives = 171/257 (66.54%), Query Frame = 2
Query: 1055 TEYEKRKGAAVDRHHIQDHRAKQLLVVPSDDKFVAVAAPEAFSRHSGTCMILGGQGAYSHGSSKSYELKLGNFLRIGSVGVVVSEIHTGTASGVAAAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGEYKCLSWEELTCLKGDIAAIQK-----------DLVTLEALTAQEEDSQ--KLAKAXXXXXXXXXXXXXXXGKMCYMCFDDADDADNPLVAPCECKGDTRYVHLNCLQKWHTTSSENKV 1786
            +EYEKRKG+ V RHHI+DHRAKQLLVVP+DDKFVAVAAPEAFSRHSGTCMILGGQGAY +G+SKSYELKLGNFLRIGSVGVVVSEIHTG                                                GE+KCLSWEELTCLKGDIAAIQK           DLVT+EALTAQEE+++  KL                   +MCYMCFDD D+  NPLVAPCECKGDTRYVHLNCLQKWHTT+SENKV
Sbjct:   13 SEYEKRKGSQVVRHHIKDHRAKQLLVVPNDDKFVAVAAPEAFSRHSGTCMILGGQGAYGNGTSKSYELKLGNFLRIGSVGVVVSEIHTGA----------------------------------------------GGEHKCLSWEELTCLKGDIAAIQKACETACSCLCGDLVTIEALTAQEENAEADKLTGVLQNGGGGVVNT-----RMCYMCFDDVDEPGNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKV 218          
BLAST of mRNA_P-wetherbeei_contig6780.1.3 vs. uniprot
Match: A0A7S4DHT1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHT1_HETAK)

HSP 1 Score: 250 bits (639), Expect = 1.580e-70
Identity = 147/325 (45.23%), Postives = 181/325 (55.69%), Query Frame = 2
Query: 1043 VDIATEYEKRKGAAVDRHHIQDHRAKQLLVVPSDDKFVAVAAPEAFSRHSGTCMILGGQGAYSHGSSKSYELKLGNFLRIGSVGVVVSEIHTGTASGVAAAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGEYKCLSWEELTCLK-GDIAAIQKDLVTLEALTAQEE----DSQKLAKAXXXXXXXXXXXXXXXGKMCYMCFDDADDADNPLVAPCECKGDTRYVHLNCLQKWHTTSSENKVCVILNNKGVRVCTVCKSPYKASVRLPGGESVSLFQSPLPPPYICFMVVTRHQNNEDLFSTKYQLSFSSVLNR 2002
            +DI +E+E +    + R ++ D RA QLL+ P+ D F  V+APE FSRHSGTC ILG +    H SS+  +LKLG FLR+GSVG+VVSEIHTG                                              G    K L  EEL CLK   IA  Q+   T  A TA E     D+  +A +                  CYMCFD  ++ DNPLVAPCECKGDTRYVHL CLQ+WH +S+ N+VCV+ N  G  VC+VCK+PYK  V L  G +  L +  L PPYICF VVT+HQN++DLFSTKYQLSF +VLNR
Sbjct:   75 IDIGSEFESKLEKVIPRWYLPDPRATQLLITPAKDCFWVVSAPEVFSRHSGTCRILGDK---DH-SSELQQLKLGMFLRLGSVGLVVSEIHTG---------------------------------------------GGPEGQKILQDEELRCLKEAAIAMKQRIRNTGPAPTATENVDNSDADSIASSGCLSNSYHGATSTPVALQCYMCFDGTEEDDNPLVAPCECKGDTRYVHLKCLQRWHVSSNGNQVCVVCNQNGAHVCSVCKAPYKTHVILKDGTTSDLLRPSLNPPYICFTVVTQHQNSDDLFSTKYQLSFDTVLNR 350          
BLAST of mRNA_P-wetherbeei_contig6780.1.3 vs. uniprot
Match: A0A836CMN7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMN7_9STRA)

HSP 1 Score: 190 bits (483), Expect = 3.500e-49
Identity = 116/321 (36.14%), Postives = 169/321 (52.65%), Query Frame = 2
Query: 1043 VDIATEYEKRKGAAVDRHHIQDHRAKQLLVVPSD--DKFVAVAAPEAFSRHSGTCMILGGQGAYSHGSSKSYELKLGNFLRIGSVGVVVSEIHTGTASGVAAAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGEYKCLSWEELTCLKGDIAAIQKDLVTLEALTAQEEDSQKLAKAXXXXXXXXXXXXXXXGKM-CYMCFDDADDADNPLVAPCECKGDTRYVHLNCLQKWHTTSSENKVCVILNNKGVRVCTVCKSPYKASVRLPGGESVSLFQSPLPPPYICFMVVTRHQNNEDLFSTKYQLSFSSVL 1996
             DIA ++E   G  ++R  + D RA QLL+VP     ++  V A + F+RHSGTC++LG +            +++G+FLR+GSVG++V+E H G      A  AA                                        + L    +T L         D  T    + ++  S   +           XXXXX   + CYMCFDD ++ DNPLVAPCEC+G T+YVH++CLQ+WHT+   ++ C++ N KG +VC VCK+PYK  +RLP G+ + L +  L PP+I F V TRHQ+ E+LFST++ LSFSS++
Sbjct:   80 ADIAGQWESATGCRLNRLTVADSRASQLLLVPQPHAQRWWVVPARQPFTRHSGTCIVLGDRATLG----PPQRIRVGDFLRLGSVGLLVTETHNG------ATHAALSEAQLQELAMDREGFPEELFDGEAITASSRFSQGSPSHQRRLGQRSVTDLMDSSFNYGGDGSTPAPASERDYGSDDDSDLESDIEERSAXXXXXATPLQCYMCFDDDEEGDNPLVAPCECRGSTKYVHVHCLQRWHTSKERHQPCIVSNKKGAQVCGVCKAPYKTHLRLPNGDFIPLLRPQLRPPFISFTVCTRHQHQEELFSTRFHLSFSSLM 390          
BLAST of mRNA_P-wetherbeei_contig6780.1.3 vs. uniprot
Match: W7U5D4_9STRA (Fha domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5D4_9STRA)

HSP 1 Score: 191 bits (484), Expect = 3.520e-48
Identity = 117/338 (34.62%), Postives = 163/338 (48.22%), Query Frame = 2
Query: 1049 IATEYEKRKGAAVDRHHIQDHRAKQLLVVPSDDKFVAVAAPEAFSRHSGTCMILGGQGAYSHGSSKSYELKLGNFLRIGSVGVVVSEIHTGTASGVAAAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGEYKCLSWEE-------------------------LTCLKGDIAAIQKDLVTLEALTAQEEDSQKLAKAXXXXXXXXXXXXXXXGKMCYMCFDDADDADNPLVAPCECKGDTRYVHLNCLQKWHTTSSENKVCVILNNKGVRVCTVCKSPYKASVRLPGGESVSLFQSPLPPPYICFMVVTRHQNNEDLFSTKYQLSFS 1987
            IA EYE+  G ++ R  I D RA+QL+VV   + F  V APE FSRH+GTC +LG +    H  +  Y L++G+FLRIGSVG++VSE+  G    V +                                         G    +  E+                         L  L+ D   I++DL       AQEE +  + +                  +CYMCFDD D + NPLVAPC CKG TRYVHL+CL+ W  ++ + K CV+ + +    C +CK+ YK  VR   G  + L +  LPPP+ICF+VVT+H   E+LF+T++QLSFS
Sbjct:   99 IAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDK----HQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQGIGGAGGRLTVLRGIEGGRGAGEAGAPSRQGQGPGSLPDGGNLPMMGEEDGRGTSSSGKAGRNRRSSRGSITEKDLFYLREDAGEIRQDLF------AQEEAATAVQEGLAATALGLSPGRSPRVALCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFS 426          
BLAST of mRNA_P-wetherbeei_contig6780.1.3 vs. uniprot
Match: A0A7S2SJQ1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJQ1_9STRA)

HSP 1 Score: 188 bits (478), Expect = 6.710e-48
Identity = 110/317 (34.70%), Postives = 158/317 (49.84%), Query Frame = 2
Query: 1046 DIATEYEKRKGAAVDRHHIQDHRAKQLLVVPSDDKFVAVAAPEAFSRHSGTCMILGGQGAYSHGSSKSYELKLGNFLRIGSVGVVVSEIHTGTASGVAAAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGEYKCLSWEELTCLKGDIAAIQKDLVTLEALTAQEEDSQKLAKAXXXXXXXXXXXXXXXGKMCYMCFDDADDADNPLVAPCECKGDTRYVHLNCLQKWHTTSSENKVCVILNNKGVRVCTVCKSPYKASVRLPGGESVSLFQSPLPPPYICFMVVTRHQNNEDLFSTKYQLSFSSVL 1996
            D+  EY    G  + R+ + D RA QLLV      +  V APEAFSRHSGTC +LG +    H  + ++ L++G+FLR+GSVGVVV E H G                                                 E + LS E++  +  D  +     + L   T  E     + +                  +CYMCFDD D  DNPL+ PC C+GDTRYVH+NCL+KWHT  ++N++C + +      C+VCKS +K+  +L  G  V LF+S L PPY+  +V T+H+  + LF+T++QLSFS++L
Sbjct:  150 DLGAEYASHIGRKLQRYELSDTRACQLLVTTHSKSYWVVPAPEAFSRHSGTCRLLGDR---KHPLA-THTLQVGDFLRVGSVGVVVIETHNGV------------------------------------------------ENRILSEEKIQKIMKDTTSNNGGFLDL-GETDGENSDDSMCRDMERIAASVREDNDSEAPICYMCFDDEDTEDNPLITPCRCRGDTRYVHVNCLRKWHTAEADNQICFLSSVDAT--CSVCKSTFKSDFKLKDGRLVKLFKSSLEPPYVSLLVATKHEMAQRLFNTRFQLSFSTLL 411          
BLAST of mRNA_P-wetherbeei_contig6780.1.3 vs. uniprot
Match: A0A7R9Z764_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z764_9STRA)

HSP 1 Score: 182 bits (462), Expect = 9.860e-47
Identity = 106/317 (33.44%), Postives = 158/317 (49.84%), Query Frame = 2
Query: 1046 DIATEYEKRKGAAVDRHHIQDHRAKQLLVVPSDDKFVAVAAPEAFSRHSGTCMILGGQGAYSHGSSKSYELKLGNFLRIGSVGVVVSEIHTGTASGVAAAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGEYKCLSWEELTCLKGDIAAIQKDLVTLEALTAQEEDSQKLAKAXXXXXXXXXXXXXXXGKMCYMCFDDADDADNPLVAPCECKGDTRYVHLNCLQKWHTTSSENKVCVILNNKGVRVCTVCKSPYKASVRLPGGESVSLFQSPLPPPYICFMVVTRHQNNEDLFSTKYQLSFSSVL 1996
            D+ +EY    G  + R+ + D RA QLLV   +  F  V APEAFSRHSGTC +LG +    H  +  + L++G+FLR+GSVGVVV E H G                                                 E + LS E++  +  D  +     + +     +  D                        +CYMCFD+ D  +NPL+ PC+C GDTRYVH+NCL+KWHT  ++N++C + +      C+VCKS +K+  +L  G ++ LF+S L PPY+  +V T+H+  + LF+T++QLSFS++L
Sbjct:   76 DLGSEYALHVGRKLQRYELSDTRACQLLVTTHNKSFWVVPAPEAFSRHSGTCRLLGDR---KHPLAP-HTLQVGDFLRVGSVGVVVIETHNGV------------------------------------------------ENRVLSEEKIQKIMKDTTSSSGGFLDIGETDGENSDDSS------REGRLMEERDHGDAPVCYMCFDEEDTEENPLITPCKCLGDTRYVHVNCLRKWHTAEADNQICFLSSVDAT--CSVCKSTFKSDFKLKDGRTMKLFKSSLEPPYVSLLVATKHEMAQRLFNTRFQLSFSTLL 332          
BLAST of mRNA_P-wetherbeei_contig6780.1.3 vs. uniprot
Match: A0A1Z5K247_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K247_FISSO)

HSP 1 Score: 184 bits (467), Expect = 1.360e-46
Identity = 110/320 (34.38%), Postives = 160/320 (50.00%), Query Frame = 2
Query: 1043 VDIATEYEKRKGAAVDRHHIQDHRAKQLLVVPSDDKFVAVAAPEAFSRHSGTCMILGGQGAYSHGSSKSYELKLGNFLRIGSVGVVVSEIHTGTASGVAAAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGEYKCLSWEELTCLKGDIAAIQKDLVTLEALTAQEEDSQKLAKAXXXXXXXXXXXXXXXGK--MCYMCFDDADDADNPLVAPCECKGDTRYVHLNCLQKWHTTSSENKVCVILNNKGVRVCTVCKSPYKASVRLPGGESVSLFQSPLPPPYICFMVVTRHQNNEDLFSTKYQLSFSSVL 1996
            VD+ TEY +  G  + R+ + D RA QLLV      F  V APEAFSRHSGTC +LG +    H  + S+ L++G+FLR+GSVGVVV E H G                                                 E K LS E++  +  D        + L     +  D     +                G+  +CYMCFD+ D  +NP++ PC+C GDT+YVH+ CL+KWHT  ++N++C + +      C+VCKS +K+  +L  G  V LF+S L PPYI  +V T+H+  + LF+T++QLSFS+++
Sbjct:  128 VDLGTEYAQYVGRKLQRYELSDTRACQLLVTTHGKSFWVVPAPEAFSRHSGTCRLLGDR---KHPPA-SHTLQVGDFLRVGSVGVVVIETHDGL------------------------------------------------ENKVLSEEKIQKIMKDTTN-SNGFLDLAETDGENSDDSSDGETNPHGKLPNNSSKGDLGENPVCYMCFDEEDTDENPMITPCKCSGDTKYVHVECLRKWHTAEADNQICFLSSVDAT--CSVCKSSFKSDFKLKDGRQVKLFKSSLEPPYISLLVATKHEMAQRLFNTRFQLSFSTLM 392          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6780.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQT9_ECTSI5.670e-16465.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C9Y1_9STRA1.210e-15767.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZD25_9STRA6.450e-13869.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JU93_9PHAE8.540e-8861.09RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
A0A7S4DHT1_HETAK1.580e-7045.23Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CMN7_9STRA3.500e-4936.14Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
W7U5D4_9STRA3.520e-4834.62Fha domain protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A7S2SJQ1_9STRA6.710e-4834.70Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7R9Z764_9STRA9.860e-4733.44Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A1Z5K247_FISSO1.360e-4634.38Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6780contigP-wetherbeei_contig6780:22..3293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FQT9
PFAMsFHA,RINGv
Model size2002
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue8.57e-166
EggNOG OGs2BCA1@1|root,2S0ZQ@2759|Eukaryota
DescriptionThe RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins. Some of these proteins have been shown both in vivo and in vitro to have ubiquitin E3 ligase activity.
Cds size1788
COG categoryA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186937.1624022-CDS-P-wetherbeei_contig6780:21..2401683186937.1624022-CDS-P-wetherbeei_contig6780:21..240Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6780 22..240 -
1683186937.1752782-CDS-P-wetherbeei_contig6780:889..17991683186937.1752782-CDS-P-wetherbeei_contig6780:889..1799Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6780 890..1799 -
1683186937.1833053-CDS-P-wetherbeei_contig6780:2420..30791683186937.1833053-CDS-P-wetherbeei_contig6780:2420..3079Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6780 2421..3079 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186937.1908987-UTR-P-wetherbeei_contig6780:3079..32931683186937.1908987-UTR-P-wetherbeei_contig6780:3079..3293Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6780 3080..3293 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6780.1.3prot_P-wetherbeei_contig6780.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6780 22..3079 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6780.1.3

>prot_P-wetherbeei_contig6780.1.3 ID=prot_P-wetherbeei_contig6780.1.3|Name=mRNA_P-wetherbeei_contig6780.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=596bp
MGNKAANGSTLVPADVERAGSAQGTLASGNASLEAEGASGHTEQAGGQCV
PDLRFDLSVDAEALNSGSESNEADEASALETRGGRRVEGTQGSSMASLAA
NAPPTALMAAGAGSRASAARGGGDAAAGFSASENGGVGGGGAPSRARAAS
PAADEAIAMALSDMAGDDDGGDGVDDGESSLGDHRPPALELNGASEPSLD
THSRGSSGDEANAAGSKGAHVEVAVFKYQPGNQAPVENLQNYRISQRGAA
LTGGLGDSGHSRASRGSDGGGGASGRVDIATEYEKRKGAAVDRHHIQDHR
AKQLLVVPSDDKFVAVAAPEAFSRHSGTCMILGGQGAYSHGSSKSYELKL
GNFLRIGSVGVVVSEIHTGTASGVAAAAAASGGAAVGGGGAVASGAAVAG
GAGVAGGAATGGGGAGAGEYKCLSWEELTCLKGDIAAIQKDLVTLEALTA
QEEDSQKLAKAGGGAAAVAAAAAAAGGKMCYMCFDDADDADNPLVAPCEC
KGDTRYVHLNCLQKWHTTSSENKVCVILNNKGVRVCTVCKSPYKASVRLP
GGESVSLFQSPLPPPYICFMVVTRHQNNEDLFSTKYQLSFSSVLNR
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mRNA from alignment at P-wetherbeei_contig6780:22..3293-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6780.1.3 ID=mRNA_P-wetherbeei_contig6780.1.3|Name=mRNA_P-wetherbeei_contig6780.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3272bp|location=Sequence derived from alignment at P-wetherbeei_contig6780:22..3293- (Phaeothamnion wetherbeei SAG_119_79)
GCGCGAAGAGGCGGACTGGAAAAGGCGCTTCGCCTTGACGCTCTGTGCGT GCCGATAGCACAACGATCGGTCGGCTTCACTGCTTGCGGCTTGCTGCAGC CGGACCCCATAAGGAGGAGCCGGCGTTAGGGCCCTGGCTTTCTGGCACAT CGCAGGTTGAGCTCAGCACGCCGCTCTCCGTAGTGGCGACTCCGCGGTGG CGACCCGCGGCAGTATGGGTAATAAGGCCGCGAACGGCAGCACGCTTGTT CCGGCGGACGTGGAGCGAGCGGGGAGTGCGCAGGGAACTCTCGCCAGCGG AAACGCATCGTTGGAAGCCGAAGGAGCCTCGGGTCACACGGAGCAGGCAG GCGGCCAGTGCGTTCCCGACCTGCGTTTCGACCTCAGCGTGGACGCCGAG GCGCTGAACAGCGGCAGCGAGTCCAACGAGGCGGACGAGGCGTCCGCGCT GGAGACGCGAGGTGGACGAAGAGTGGAAGGGACCCAGGGAAGCAGCATGG CGTCGCTCGCGGCGAACGCCCCGCCGACGGCACTGATGGCGGCGGGAGCG GGCAGCCGCGCGTCGGCGGCGAGAGGTGGTGGTGACGCGGCGGCGGGGTT CTCTGCGTCGGAGAATGGCGGTGTTGGCGGCGGCGGTGCACCGTCGCGGG CAAGGGCGGCGTCCCCCGCGGCCGACGAGGCCATCGCGATGGCGTTGTCC GACATGGCCGGCGACGACGACGGCGGCGACGGCGTCGATGACGGCGAGAG CAGCCTCGGCGACCACCGGCCGCCGGCTCTCGAACTCAATGGCGCGTCGG AGCCGTCGCTCGACACGCACTCGCGGGGTTCTTCCGGCGACGAGGCGAAC GCCGCGGGGAGCAAAGGCGCACAGTGAGTTTGATTTTTCTGTCCTTTTTG CGGACGGTTCTTTCTTTTTTGGTTTTCACAGCAGAAGTCTTTCTTCGCTC CTTCTTCTTTCGGTGTTGGAGGTGTTTCGTCCTGGCCAGTTTTCGTTCTG TCTTCCACGAGTGATTTCCTTACGGTTTATGTGGCTCGTGCATAGCCGTT GAGAAAGAAGGATAGAGTTTCCACAGTGATGCTGCCCCATTTCGTTCCAT ATTTTGGTATTTCGCGGAAAGAATCGTTTCACGCGCGGGCCGTAGCTACT TGCTGCATGCCGCGTGCGATTTCATTTCGCCTGGCTGGCATTTTCCAGTG AACGCTACTGGTTGCGTGTTTCGGGGCTATCTGGACTTTCTCGCCTCCCC GACTTACTATTCGTTCTGTTCATTTATTTCATTTCCACTTCTTCCTATTA AAGGTGTTCTGTCTTGCGGTATGTTTGTTCCTTCCTGCCGCGAAACTACT TGTCCTTTTTTCGTCCTATTCGTCGTCCTTTCATCTCAACGTCCCAAACC TCGTTCTCTATATTTGTTCATTCTTTTTCTGCTTCTGTCTTCAACTTAGC TTCTTTTTCTGCCCGTCCTTTCGTATTCGTTTTGCTCTCGGCAGCGTTGA AGTTGCAGTATTCAAGTATCAGCCGGGGAACCAGGCGCCGGTGGAGAACC TGCAGAACTACCGAATCAGCCAGCGCGGCGCGGCGCTGACGGGCGGCCTC GGCGACTCGGGCCACTCGCGAGCGAGCCGCGGCAGCGATGGCGGAGGCGG CGCTTCTGGCCGGGTCGACATCGCCACCGAGTACGAGAAGCGCAAGGGCG CCGCCGTCGACCGCCACCACATCCAAGACCACCGGGCCAAGCAGCTGCTG GTCGTTCCGTCGGACGACAAGTTTGTGGCCGTCGCCGCGCCCGAAGCATT TTCGCGCCATTCCGGAACGTGCATGATCCTCGGCGGCCAGGGCGCCTACT CTCACGGTAGCTCCAAGTCGTACGAGCTCAAGCTCGGCAACTTCCTCCGC ATCGGCTCCGTCGGCGTCGTCGTCAGCGAGATCCACACTGGGACCGCAAG TGGCGTCGCTGCCGCCGCTGCTGCAAGCGGCGGCGCAGCGGTCGGCGGCG GCGGAGCGGTGGCGAGCGGAGCAGCTGTGGCAGGTGGCGCGGGGGTTGCG GGCGGGGCGGCAACGGGCGGCGGCGGCGCTGGCGCAGGGGAGTACAAGTG CCTTTCGTGGGAGGAGTTGACGTGCCTCAAGGGGGACATTGCGGCGATCC AGAAGGACCTGGTGACGTTGGAGGCACTGACGGCGCAGGAGGAGGACTCG CAGAAGCTGGCGAAGGCTGGCGGCGGCGCGGCGGCGGTGGCGGCGGCAGC GGCGGCTGCCGGCGGCAAGATGTGCTATATGTGCTTCGACGACGCCGACG ACGCCGACAACCCGCTCGTGGCGCCCTGCGAATGCAAGGGCGACACGCGG TACGTCCACCTCAACTGCTTGCAGAAGTGGCACACCACCTCATCAGAAAA CAAGGTCAGGGTCACTCTGATTTTTGTCTTTCTTGCGGTCCGTTTGTTCG GCGATGGTTTATGTCGTTTTATCTCGTTTCTCAAGACGTCTCGTTTGACT GGTCTCCGTTATCGTCTTGCAGCGCCTCTGGCTTTCCTACAAGGATTTTC TGCGTTTGCCCCGTTTGGCTTCGTCGCAGCTGCGCGTCTTTTGGGGTCGT AAATGTTGTTTTCTCGCATCCTGGTGTCATGCATGTTTGCCGCTTCGTTG CGTATAAGAGTTATTTGGAAAGGAACATCTTTTTGGAGGGCACGGATGCG GCATGGAGACAAGGGGCACCGTTCGTTGCTCCACGAAAAGACATTTCTTC CTTCTTTTACAGCACTGACAGTGCTGACTACGGTTGTCTACGTTACTTTT GGCGTTCTGATGGGTAGGTGTTTCTTTTTTGCCTATTAAGCTGCTAGCCA ACAGCCCTCCAATCCCTCTCCTTCTCACATCACATCTTCTCTCCCCGCCC CTTTTCCTCGCTTGGCGGTCTGCTCTTGGCGGCTTGGGTTGTCAACGCCG ATCGCCGTCGGGCTCGCTGCCCCTTTGCGGCCGCCGGCGTGCTGGCAATG CATGATGTGCTGTTACTGCCGGATGCACACGCGTCTGCCTGCCATGCCGG CAGGTGTGCGTCATCCTCAACAACAAGGGGGTGCGCGTCTGCACCGTCTG CAAATCCCCTTACAAAGCCAGCGTGCGGCTGCCGGGCGGCGAGTCGGTGT CGCTGTTCCAGTCGCCGCTGCCGCCGCCGTACATCTGTTTCATGGTGGTG ACGCGGCACCAAAACAACGAGGACCTTTTCTCGACCAAGTACCAGCTTTC CTTCTCCAGCGTGCTGAACCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6780:22..3293-

>mRNA_P-wetherbeei_contig6780.1.3 ID=mRNA_P-wetherbeei_contig6780.1.3|Name=mRNA_P-wetherbeei_contig6780.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1788bp|location=Sequence derived from alignment at P-wetherbeei_contig6780:22..3293- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGTAATAAGGCCGCGAACGGCAGCACGCTTGTTCCGGCGGACGTGGA
GCGAGCGGGGAGTGCGCAGGGAACTCTCGCCAGCGGAAACGCATCGTTGG
AAGCCGAAGGAGCCTCGGGTCACACGGAGCAGGCAGGCGGCCAGTGCGTT
CCCGACCTGCGTTTCGACCTCAGCGTGGACGCCGAGGCGCTGAACAGCGG
CAGCGAGTCCAACGAGGCGGACGAGGCGTCCGCGCTGGAGACGCGAGGTG
GACGAAGAGTGGAAGGGACCCAGGGAAGCAGCATGGCGTCGCTCGCGGCG
AACGCCCCGCCGACGGCACTGATGGCGGCGGGAGCGGGCAGCCGCGCGTC
GGCGGCGAGAGGTGGTGGTGACGCGGCGGCGGGGTTCTCTGCGTCGGAGA
ATGGCGGTGTTGGCGGCGGCGGTGCACCGTCGCGGGCAAGGGCGGCGTCC
CCCGCGGCCGACGAGGCCATCGCGATGGCGTTGTCCGACATGGCCGGCGA
CGACGACGGCGGCGACGGCGTCGATGACGGCGAGAGCAGCCTCGGCGACC
ACCGGCCGCCGGCTCTCGAACTCAATGGCGCGTCGGAGCCGTCGCTCGAC
ACGCACTCGCGGGGTTCTTCCGGCGACGAGGCGAACGCCGCGGGGAGCAA
AGGCGCACACGTTGAAGTTGCAGTATTCAAGTATCAGCCGGGGAACCAGG
CGCCGGTGGAGAACCTGCAGAACTACCGAATCAGCCAGCGCGGCGCGGCG
CTGACGGGCGGCCTCGGCGACTCGGGCCACTCGCGAGCGAGCCGCGGCAG
CGATGGCGGAGGCGGCGCTTCTGGCCGGGTCGACATCGCCACCGAGTACG
AGAAGCGCAAGGGCGCCGCCGTCGACCGCCACCACATCCAAGACCACCGG
GCCAAGCAGCTGCTGGTCGTTCCGTCGGACGACAAGTTTGTGGCCGTCGC
CGCGCCCGAAGCATTTTCGCGCCATTCCGGAACGTGCATGATCCTCGGCG
GCCAGGGCGCCTACTCTCACGGTAGCTCCAAGTCGTACGAGCTCAAGCTC
GGCAACTTCCTCCGCATCGGCTCCGTCGGCGTCGTCGTCAGCGAGATCCA
CACTGGGACCGCAAGTGGCGTCGCTGCCGCCGCTGCTGCAAGCGGCGGCG
CAGCGGTCGGCGGCGGCGGAGCGGTGGCGAGCGGAGCAGCTGTGGCAGGT
GGCGCGGGGGTTGCGGGCGGGGCGGCAACGGGCGGCGGCGGCGCTGGCGC
AGGGGAGTACAAGTGCCTTTCGTGGGAGGAGTTGACGTGCCTCAAGGGGG
ACATTGCGGCGATCCAGAAGGACCTGGTGACGTTGGAGGCACTGACGGCG
CAGGAGGAGGACTCGCAGAAGCTGGCGAAGGCTGGCGGCGGCGCGGCGGC
GGTGGCGGCGGCAGCGGCGGCTGCCGGCGGCAAGATGTGCTATATGTGCT
TCGACGACGCCGACGACGCCGACAACCCGCTCGTGGCGCCCTGCGAATGC
AAGGGCGACACGCGGTACGTCCACCTCAACTGCTTGCAGAAGTGGCACAC
CACCTCATCAGAAAACAAGGTGTGCGTCATCCTCAACAACAAGGGGGTGC
GCGTCTGCACCGTCTGCAAATCCCCTTACAAAGCCAGCGTGCGGCTGCCG
GGCGGCGAGTCGGTGTCGCTGTTCCAGTCGCCGCTGCCGCCGCCGTACAT
CTGTTTCATGGTGGTGACGCGGCACCAAAACAACGAGGACCTTTTCTCGA
CCAAGTACCAGCTTTCCTTCTCCAGCGTGCTGAACCGC
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