mRNA_P-wetherbeei_contig6773.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6773.2.1 vs. uniprot
Match: A0A835Z3K6_9STRA (Thioredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3K6_9STRA) HSP 1 Score: 195 bits (495), Expect = 2.400e-57 Identity = 85/140 (60.71%), Postives = 111/140 (79.29%), Query Frame = 2
Query: 404 LYEEASRYADPRAVATECIIEVTSEEHFDHIVGKAAGGDPAHDGYVDGRGQKRQPHALIVVEVYANWCRACIGLRPKLLKLCAVHPEVLCCKINKSDQGALADRLGVKGLPTLILYKGGRRVDHFTTADRDTIEEAIADN 823
+YEE+S+YADP AVAT+C++E+TS EH D I+ AA + GYVD G +R PH LI+++V+ANWCRACIG+RPKLLKLCA HPEVLCCK+NK + +A RLG++ LPT +LYK G+R+DHFTTAD +TIE+ + DN
Sbjct: 1 MYEESSKYADPHAVATDCVVEITSNEHLDRILATAAQVENPDAGYVDHHGNQRLPHRLIMIQVHANWCRACIGVRPKLLKLCARHPEVLCCKLNKGNHEDVAARLGIRALPTFVLYKNGKRIDHFTTADIETIEQGVLDN 140
BLAST of mRNA_P-wetherbeei_contig6773.2.1 vs. uniprot
Match: D7G6A7_ECTSI (Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A7_ECTSI) HSP 1 Score: 186 bits (471), Expect = 1.970e-53 Identity = 95/155 (61.29%), Postives = 115/155 (74.19%), Query Frame = 2
Query: 380 ASSSSGA------TLYEEASRYADPRAVATECIIEVTSEEHFDHIVGKAAGGDPAHDGYVDGRGQKRQPHALIVVEVYANWCRACIGLRPKLLKLCAVHPEVLCCKINKSDQGALADRLGVKGLPTLILYKGGRRVDHFTTADRDTIEEAIADNT 826
ASS+SGA TLYEE SRYAD R+VA E I E+TS EHF+ +V +AAG D H+GY D +G R PH L++V+++A WCR C GL+PKLLKL HPEVLCCKINK+ LA +LGV+GLP LI YK G+RVDH TTA+ +TIEEAI DNT
Sbjct: 13 ASSASGAADTAKVTLYEEFSRYADRRSVAQEVIFEITSAEHFEDVVSRAAGADE-HEGYEDAQGNWRVPHKLMMVQIHAGWCRVCKGLQPKLLKLITKHPEVLCCKINKAHHEELAAKLGVRGLPMLIFYKNGKRVDHHTTANINTIEEAIRDNT 166
BLAST of mRNA_P-wetherbeei_contig6773.2.1 vs. uniprot
Match: A0A7R9U8D8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8D8_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.010e-29 Identity = 58/139 (41.73%), Postives = 84/139 (60.43%), Query Frame = 2
Query: 407 YEEASRYADPRAVATECIIEVTSEEHFDHIVGKAAGGDPAHDGYVDGRGQKRQPHALIVVEVYANWCRACIGLRPKLLKLCAVHPEVLCCKINKSDQGALADRLGVKGLPTLILYKGGRRVDHFTTADRDTIEEAIADN 823
YEE S YAD A A E +I+VTS+E FD I+ AAG +P ++PH ++++ V+A WCR C L + LK+ HPEVLC K+N + + LG++G+P I+YK G+R+DHF + D +EE + DN
Sbjct: 75 YEECSFYADATACAMETLIDVTSQEQFDFIISHAAGANPLSP--------DQKPHKMVMLMVHATWCRKCKYLMKQYLKVAKAHPEVLCLKLNLATNAEVGKSLGIRGVPLFIIYKAGKRIDHFYAENADDLEEQVEDN 205
BLAST of mRNA_P-wetherbeei_contig6773.2.1 vs. uniprot
Match: A0A1X6NMX5_PORUM (Thioredoxin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMX5_PORUM) HSP 1 Score: 87.8 bits (216), Expect = 1.910e-16 Identity = 46/123 (37.40%), Postives = 67/123 (54.47%), Query Frame = 2
Query: 455 CIIEVTSEEHFDHIVGKAAGGDPAHDGYVDGRGQKRQPHALIVVEVYANWCRACIGLRPKLLKLCAVHPEVLCCKINKSDQGALADRLGVKGLPTLILYKGGRRVDHFTTADRDTIEEAIADN 823
C+ ++T+ D ++ +A+ P DG R P L+V+EVYA CRAC G+ ++C VH E + N L RLGV+G PT +L++GG R+DHF DRD +EE + N
Sbjct: 86 CVRQITTAAELDAVLSEAS--VPRADG-------GRPP--LVVLEVYATHCRACKGIARAFTRVCEVHREAIFLASNADVDDELMRRLGVRGTPTFVLFRGGVRIDHFYAKDRDALEEQVTQN 197
BLAST of mRNA_P-wetherbeei_contig6773.2.1 vs. uniprot
Match: A0A7S2TY62_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY62_9EUKA) HSP 1 Score: 82.8 bits (203), Expect = 1.560e-14 Identity = 47/125 (37.60%), Postives = 69/125 (55.20%), Query Frame = 2
Query: 452 ECIIEVTSEEHFDHIVGKAAGGDPAHDGYVDGRGQKRQPHALIVVEVYANWCRACIGLRPKLLKLCAVHPEVLCCKIN-KSDQGALADRLGVKGLPTLILYKGGRRVDHFTTADRDTIEEAIADN 823
+C+ EVTS + F+ I+ + Y D LI++E+YA+WCR C + PK K C V P+V+ ++N K D G + LG +GLP+ +L+K G+RVD F R+ I E I DN
Sbjct: 107 DCVTEVTSVKMFEEIL----------EFYKDS-------DTLIILELYADWCRKCKFMLPKFDKECEVQPDVMFIRMNTKVDLGYIQKTLGPRGLPSFMLFKHGQRVDAFYANSREIISEYIQDN 214
BLAST of mRNA_P-wetherbeei_contig6773.2.1 vs. uniprot
Match: A0A6U4NA76_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4NA76_HEMAN) HSP 1 Score: 76.6 bits (187), Expect = 3.430e-12 Identity = 32/92 (34.78%), Postives = 57/92 (61.96%), Query Frame = 2
Query: 548 RGQKRQPHALIVVEVYANWCRACIGLRPKLLKLCAVHP-EVLCCKINKSDQGALADRLGVKGLPTLILYKGGRRVDHFTTADRDTIEEAIAD 820
RG++ ++++EVYANWCR C+ + ++ + C + E + K++ L+ +LGV+G+PT I+YK G R+DHF +R+ + E + D
Sbjct: 149 RGKEVGKKRIVILEVYANWCRKCLKMSKEVFRACNQYQNEAIFLKMDAKACPDLSKKLGVRGMPTFIVYKDGERIDHFNAGNREDLNEHLED 240
BLAST of mRNA_P-wetherbeei_contig6773.2.1 vs. uniprot
Match: A0A7S0T4X2_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4X2_9RHOD) HSP 1 Score: 74.7 bits (182), Expect = 4.720e-12 Identity = 31/84 (36.90%), Postives = 51/84 (60.71%), Query Frame = 2
Query: 575 LIVVEVYANWCRACIGLRPKLLKLCAV-HPEVLCCKINKSDQGALADRLGVKGLPTLILYKGGRRVDHFTTADRDTIEEAIADN 823
L++V+V A WCRAC + ++ P++ C ++ + + LG++ LPT +LYK G+R+DHF+ D DT+EE + DN
Sbjct: 94 LVMVKVAAKWCRACKKVERPFARVAEKWDPQLKCAAVDYQESPDIVVELGIRSLPTFVLYKNGQRIDHFSARDADTLEEHVLDN 177
BLAST of mRNA_P-wetherbeei_contig6773.2.1 vs. uniprot
Match: A0A7S2V7D3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7D3_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.280e-11 Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 2
Query: 557 KRQPHALIVVEVYANWCRACIGLRPKLLKLCAVHPEVLCCKINKSDQGALADRLGVKGLPTLILYKGGRRVDHFTTADRDTIEEAIADN 823
K + +VV+VY+ CRAC + + +K+ +P +L KIN L+ +LGV+G+PT I+Y G RVDHF RD +EE I N
Sbjct: 78 KSGQYDAVVVKVYSESCRACKFMTAQFVKVLEENPNILGLKINGGMYPELSKKLGVRGVPTFIMYINGERVDHFYAKTRDALEENIEVN 166
BLAST of mRNA_P-wetherbeei_contig6773.2.1 vs. uniprot
Match: A0A7S1EU93_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EU93_9RHOD) HSP 1 Score: 67.4 bits (163), Expect = 2.770e-10 Identity = 30/84 (35.71%), Postives = 50/84 (59.52%), Query Frame = 2
Query: 572 ALIVVEVYANWCRACIGLRPKLLKLCAVHPE-VLCCKINKSDQGALADRLGVKGLPTLILYKGGRRVDHFTTADRDTIEEAIAD 820
+ +V+V A WCRAC + K+ + E + C +IN + AL LG++ LPT I+Y+ G+R+DHF + ++++E I D
Sbjct: 17 SFTLVKVSAPWCRACKSMIRPYEKISREYSEEIQCLEINVEESDALMQSLGIRSLPTFIIYRHGKRIDHFNAKNHESLKEHILD 100
BLAST of mRNA_P-wetherbeei_contig6773.2.1 vs. uniprot
Match: A0A4U7CUW3_9EURY (Thioredoxin n=10 Tax=Halorubrum TaxID=56688 RepID=A0A4U7CUW3_9EURY) HSP 1 Score: 68.2 bits (165), Expect = 6.320e-10 Identity = 37/109 (33.94%), Postives = 57/109 (52.29%), Query Frame = 2
Query: 500 GKAAGGDPAHDGYVDGRGQKRQPHALIVVEVYANWCRACIGLRPKLLKLCAVHPEVLCCKINKSDQGALADRLGVKGLPTLILYKGGRRVDHFTTA-DRDTIEEAIADN 823
G A +P H D + H +++V+ YA+WC C + P + L A + K++ A+A +LG + +PTL+LY G VD F A DR T+E AIA++
Sbjct: 53 GAATPSEPIHVNGTDELRRAVDEHDVVLVDCYADWCGPCQMMEPAIEAL-AAETDAAVAKVDVDANQAVAQQLGARSIPTLVLYADGEAVDRFVGAQDRATLESAIAEH 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6773.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6773.2.1 >prot_P-wetherbeei_contig6773.2.1 ID=prot_P-wetherbeei_contig6773.2.1|Name=mRNA_P-wetherbeei_contig6773.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp MGRSAAAAATTVLVMAAAATVTPRCRAFAPLELVSSQTLAPWRRTGARRVback to top mRNA from alignment at P-wetherbeei_contig6773:988..2368+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6773.2.1 ID=mRNA_P-wetherbeei_contig6773.2.1|Name=mRNA_P-wetherbeei_contig6773.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1381bp|location=Sequence derived from alignment at P-wetherbeei_contig6773:988..2368+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6773:988..2368+ >mRNA_P-wetherbeei_contig6773.2.1 ID=mRNA_P-wetherbeei_contig6773.2.1|Name=mRNA_P-wetherbeei_contig6773.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig6773:988..2368+ (Phaeothamnion wetherbeei SAG_119_79)back to top |