mRNA_P-wetherbeei_contig6765.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6765.1.1 vs. uniprot
Match: A0A835YZY2_9STRA (Core-2/I-branching enzyme-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY2_9STRA) HSP 1 Score: 113 bits (283), Expect = 4.350e-24 Identity = 61/150 (40.67%), Postives = 90/150 (60.00%), Query Frame = 3
Query: 408 ASWDDVVVEEATPARIAYTILVASEREATRLSYLLPLIYHPANFYLIHLDAKATPAAEASVRNTIGKLPRPAAAADAADADAVAAALSPPNVELLEPRIRVAWGGFSLVLAALHGLGRSLRWQG-WDFWINLSASDMPLMTQPEMMAALG 854
A W V+ ATPA+I ++I ++ R+A LS LL ++H N YL+H+DAKA + A++RN I ++ A P N++L++ ++V+WG FS++L ALHGL ++ W WDFWINLS +DMPL+T EM LG
Sbjct: 30 ALWSRVL-RSATPAKILFSITISGSRDALALSTLLRALWHQDNLYLLHVDAKALASDMAAIRNVIKQV----------------AGADPKNIKLVDNPVQVSWGRFSMLLTALHGLSSAIGWSSQWDFWINLSPADMPLLTADEMRLVLG 162
BLAST of mRNA_P-wetherbeei_contig6765.1.1 vs. uniprot
Match: D8LDZ1_ECTSI (Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ1_ECTSI) HSP 1 Score: 112 bits (281), Expect = 3.770e-23 Identity = 70/172 (40.70%), Postives = 101/172 (58.72%), Query Frame = 3
Query: 447 ARIAYTILVASEREATRLSYLLPLIYHPANFYLIHLDAKATPAAEASVRNTIGKLPRPAAAADAADADAVAAALSPPNVELLEPRIRVAWGGFSLVLAALHGLGRSLRW-QGWDFWINLSASDMPLMTQPEMMAALGVHAASNASFIAGIVSSA*D----GASDNETHQRRA 947
AR+A+ I+ + + + +LS LLP IYHP N YL+H+DAKA +R + A+ AA PPN LLEP V+WGGFS+ LA L+G+ +L W +GWD++INLS SD P++TQ EM LG HA + SF+ G + + + G ++++ QRRA
Sbjct: 149 ARLAFLIMSSGD-DIAKLSVLLPEIYHPDNIYLVHVDAKAPREQTEKIREVVR-------------ANFPAADGRPPNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGELMTGFEKRWQGYTEDQGLQRRA 306
BLAST of mRNA_P-wetherbeei_contig6765.1.1 vs. uniprot
Match: A0A6H5KBR7_9PHAE (GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR7_9PHAE) HSP 1 Score: 108 bits (270), Expect = 6.600e-22 Identity = 64/149 (42.95%), Postives = 89/149 (59.73%), Query Frame = 3
Query: 447 ARIAYTILVASEREATRLSYLLPLIYHPANFYLIHLDAKATPAAEASVRNTIGKLPRPAAAADAADADAVAAALSPPNVELLEPRIRVAWGGFSLVLAALHGLGRSLRW-QGWDFWINLSASDMPLMTQPEMMAALGVHAASNASFIAG 890
AR+A+ I+ + + + +LS LLP IYHP N YL+H+DAKA +R + A+ AA P N +LLEP V+WGGFS+ LA L+G+ +L W +GWD++INLS SD P++TQ EM LG HA + SF+ G
Sbjct: 89 ARLAFLIMSSGD-DIAKLSVLLPEIYHPDNIYLVHVDAKAPREQTEKIREVVR-------------ANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDG 223
BLAST of mRNA_P-wetherbeei_contig6765.1.1 vs. uniprot
Match: A0A6H5KJT8_9PHAE (Protein xylosyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT8_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 2.930e-18 Identity = 56/149 (37.58%), Postives = 84/149 (56.38%), Query Frame = 3
Query: 447 ARIAYTILVASEREATRLSYLLPLIYHPANFYLIHLDAKATPAAEASVRNTIGKLPRPAAAADAADADAVAAALSPPNVELLEPRIRVAWGGFSLVLAALHGLGRSLRWQG-WDFWINLSASDMPLMTQPEMMAALGVHAASNASFIAG 890
AR+ + I+VA+ +E L LL +YH +F+L+HLD KA+ A V + I ++ + NV ++P + V WGGF++ L A++GL ++L W WD++INLSASD+PL+ E+ LG H A N SFI G
Sbjct: 87 ARVVFYIMVANLQELPGLDALLRTLYHVDHFFLVHLDVKASALARQGVESGIERMLDERGNGER-------------NVRFVDPAMPVTWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITG 222
BLAST of mRNA_P-wetherbeei_contig6765.1.1 vs. uniprot
Match: A0A6H5L1U8_9PHAE (GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1U8_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 2.000e-16 Identity = 55/167 (32.93%), Postives = 83/167 (49.70%), Query Frame = 3
Query: 408 ASWDDVV-----VEEATPARIAYTILVASEREATRLSYLLPLIYHPANFYLIHLDAKATPAAEASVRNTIGKLPRPAAAADAADADAVAAALSPPNVELLEPRIRVAWGGFSLVLAALHGLGRSLRW-QGWDFWINLSASDMPLMTQPEMMAALGVHAASNASFIAG 890
A +D+V+ + PAR A+ I+ + L +P +Y P NF+LIH+D K++ A VR + L N +LEP V+WGG+S+ L AL GL + W + WD++INLSA+D PL++ EM A+G S +F+ G
Sbjct: 110 AEYDEVIAAVPGLSGTRPARFAFLIMAHGPADVELLRRNVPWLYSPLNFFLIHMDRKSSDKDRADVRELLHGLD---------------------NARILEPAQSVSWGGYSITLTALFGLSTLVEWSRDWDYFINLSATDFPLLSSAEMSVAMGSFVESRMNFVTG 255
BLAST of mRNA_P-wetherbeei_contig6765.1.1 vs. uniprot
Match: A0A6H5L6Q9_9PHAE (Protein xylosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6Q9_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 6.560e-16 Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = 3
Query: 447 ARIAYTILVASEREATRLSYLLPLIYHPANFYLIHLDAKATPAAEASVRNTIGKLPRPAAAADAADADAVAAALSPPNVELLEPRIRVAWGGFSLVLAALHGLGRSLRWQG-WDFWINLSASDMPLMTQPEMMAALGVHAASNASFIAG 890
ARI Y I+ + E + LL IY P NFYL+HLD K + N I + NV +LEP + V+WGG+++ L A+ G+ ++W WDF+INLSASD PL+ Q E+ LG +A +F++G
Sbjct: 174 ARIGYLIMSSGTEELHKTKRLLKAIYDPNNFYLVHLDRKDKHSIRRDFENFIEEWD---------------------NVRMLEPALDVSWGGYTITLTAIFGICTMVQWNDEWDFFINLSASDFPLLPQSELTTVLGKYADVGMNFVSG 301
BLAST of mRNA_P-wetherbeei_contig6765.1.1 vs. uniprot
Match: D8LCA7_ECTSI (Protein xylosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA7_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 3.940e-15 Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = 3
Query: 468 LVASEREATRLSYLLPLIYHPANFYLIHLDAKATPAAEASVRNTIGKLPRPAAAADAADADAVAAALSPPNVELLEPRIRVAWGGFSLVLAALHGLGRSLRWQG-WDFWINLSASDMPLMTQPEMMAALGVHAASNASFIAG 890
+VA+ +E L LL +YH +F+L+HLD KA+ A V + I ++ + NV + P + + WGGF++ L A++GL ++L W WD++INLSASD+PL+ + E+ LG H A N SFI G
Sbjct: 1 MVANLQELPGLDALLRTLYHVDHFFLVHLDVKASAQARQGVESRIERVLDERGNGER-------------NVRFVSPAMPITWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLL-KDEIAGILGEHKAGNTSFITG 128
BLAST of mRNA_P-wetherbeei_contig6765.1.1 vs. uniprot
Match: A0A835Z5M7_9STRA (Protein xylosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5M7_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 4.710e-15 Identity = 60/173 (34.68%), Postives = 88/173 (50.87%), Query Frame = 3
Query: 390 DGHVPGASW---DDVVVEEATPARIAYTILVASEREATRLSYLLPLIYHPANFYLIHLDAKATPAAEASVRNTIGK--LPRPAAAADAADADAVAAALSPPNVELLEPRIRVAWGGFSLVLAALHGLGRSL-RWQGWDFWINLSASDMPLMTQPEMMAALGVHAASNASFIAG 890
DG P S D E ARIAY I VA + E L LL +YHP N Y IH+D+KAT + + + + + RP A P N+ ++ + VAWGG SL+L +++ + ++ + WD+W+N+S SDMP++ Q E+M L A SFI+G
Sbjct: 25 DGDPPPTSTYGGDSGASEPIREARIAYAITVAGDGEYHGLKRLLKYLYHPDNLYYIHVDSKATAMTRLQIEHLLKETWVKRPRTGAQVG---------LPSNLVMVGNPVSVAWGGLSLLLTSVYLMAVAVDSGERWDYWVNVSPSDMPMLPQSEIMELLAEPARRGMSFISG 188
BLAST of mRNA_P-wetherbeei_contig6765.1.1 vs. uniprot
Match: A0A2G5QM91_9CAUL (Glycosyl transferase n=1 Tax=Caulobacter sp. FWC2 TaxID=69664 RepID=A0A2G5QM91_9CAUL) HSP 1 Score: 74.7 bits (182), Expect = 3.540e-11 Identity = 51/137 (37.23%), Postives = 68/137 (49.64%), Query Frame = 3
Query: 453 IAYTILVASEREATRLSYLLPLIYHPANFYLIHLDAKATPAAEASVRNTIGKLPRPAAAADAADADAVAAALSPPNVELLEPRIRVAWGGFSLVLAALHGLGRSLRWQG-WDFWINLSASDMPLMTQPEMMAALGVH 860
IAY +LV R + L I+ P N Y++H+DA ATPA EA +R+ + S PN +LE + R WGG+SLV A L G+ + L W+ +INLS D PLMTQ + A L H
Sbjct: 2 IAYLLLV--HRFPQQFKRLFRAIHDPDNHYVVHVDANATPAVEAEIRDFLK---------------------SYPNAAMLESQ-RALWGGYSLVDAELRGMEKLLEMNADWEVFINLSGQDFPLMTQKSIKAFLARH 114
BLAST of mRNA_P-wetherbeei_contig6765.1.1 vs. uniprot
Match: A0A151UE32_CAJCA (Xylosyltransferase 1 n=3 Tax=Cajanus cajan TaxID=3821 RepID=A0A151UE32_CAJCA) HSP 1 Score: 71.6 bits (174), Expect = 9.730e-11 Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = 3
Query: 444 PARIAYTILVASEREATRLSYLLPLIYHPANFYLIHLDAKATPAAEASVRNTIGKLPRPAAAADAADADAVAAALSPPNVELLEPRIRVAWGGFSLVLAALHGLGRSLRWQGWDFWINLSASDMPLMTQPEMMAALGVHAASNASFI 884
P AY ++ AS+ ++ +L L+ +YHP N+YLIHLD A A V + K D V L NV ++ R V + G +++ LH + LR WD++INLSASD PL+TQ +M+ A H + +FI
Sbjct: 14 PVTFAY-LISASKGDSGKLKRLMKALYHPGNYYLIHLDYGAPEAEHRDVVEYVAK-------------DPVFGQLG--NVWVVGKRNLVTYRGPTMISTTLHAMAMLLRTCQWDWFINLSASDYPLVTQDDMIQAFS-HVPRHINFI 143 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6765.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6765.1.1 >prot_P-wetherbeei_contig6765.1.1 ID=prot_P-wetherbeei_contig6765.1.1|Name=mRNA_P-wetherbeei_contig6765.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp MERRRRRTSADDRALADGVCRWERSSLWIFLFAVVLCLAMSPRPARGQVDback to top mRNA from alignment at P-wetherbeei_contig6765:19..1442- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6765.1.1 ID=mRNA_P-wetherbeei_contig6765.1.1|Name=mRNA_P-wetherbeei_contig6765.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1424bp|location=Sequence derived from alignment at P-wetherbeei_contig6765:19..1442- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6765:19..1442- >mRNA_P-wetherbeei_contig6765.1.1 ID=mRNA_P-wetherbeei_contig6765.1.1|Name=mRNA_P-wetherbeei_contig6765.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig6765:19..1442- (Phaeothamnion wetherbeei SAG_119_79)back to top |