mRNA_P-wetherbeei_contig6755.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6755.1.1 vs. uniprot
Match: D7FHM1_ECTSI (TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM1_ECTSI) HSP 1 Score: 301 bits (770), Expect = 7.160e-88 Identity = 161/328 (49.09%), Postives = 216/328 (65.85%), Query Frame = 1
Query: 205 PEDHGMGSGENLVIMELGSWRLRCGLVSLHGGXXXXXXXXXXXXXXXXXXXXXGNGYFDDFPCCVARPRRAGADTYELVSAASGAMSAGMYANFRAEGVFVGQDAWFCCMEHPDAALRSKLDMAGPYERGKLVPERAEDLWRLCGNAFRHLRQDPATAALLVTFKPSASSAEIVCLARGFMERFQVPALRLVNEATLAALATGVQTGIMVDIGEGSVSVTPLYEGYVLWETLRLERVGGHDLSRYLDYMLLSRTNEDFNQMVERRRVEYARRVKEGHCYVSRDFDAEARRAGHFKRKSMRVFEGARLSDKLAGRYEDCASRSHLEAAD 1188
P DHG+G N V++ELG+WR+R G+V+ G + YFDDFPCCVARP R GAD ELV+ AS +++A MY+ FR GVFVG DAW+CC++HP ALRSKL ++ P R P R ED RL +A+ L+QD + + L+T+KP+A+ E++ LA +E +VPA+R+VNEA LAALA GV+ G++VDIGE VSVTP+++G+ + +R E GG D++++LDYMLLSRTNE FNQM +RRR+EY R +KE CYV DF E G FKRK+MRV +GA+ S L+G YE C SR ++ D
Sbjct: 1244 PADHGLGREGNTVVLELGAWRVRAGVVTPSG------------------EEGKSSSYFDDFPCCVARPSREGADLDELVNGAS-SLAAPMYSKFRDTGVFVGGDAWYCCLDHPSIALRSKLRLSCPMRRRDQPPSR-EDTERLADHAYGLLKQDSSLSPTLLTYKPTATVDEVLALASVLLEVHRVPAIRMVNEAQLAALAVGVKVGVIVDIGESGVSVTPIFDGFPVPPAVRSECCGGGDVTKFLDYMLLSRTNEHFNQMTDRRRLEYTREMKEEQCYVPLDFALEVEEYGAFKRKAMRVCKGAQASPMLSG-YEACDSRDFIDETD 1550
BLAST of mRNA_P-wetherbeei_contig6755.1.1 vs. uniprot
Match: A0A6H5JDL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL2_9PHAE) HSP 1 Score: 239 bits (610), Expect = 7.370e-67 Identity = 139/328 (42.38%), Postives = 190/328 (57.93%), Query Frame = 1
Query: 205 PEDHGMGSGENLVIMELGSWRLRCGLVSLHGGXXXXXXXXXXXXXXXXXXXXXGNGYFDDFPCCVARPRRAGADTYELVSAASGAMSAGMYANFRAEGVFVGQDAWFCCMEHPDAALRSKLDMAGPYERGKLVPERAEDLWRLCGNAFRHLRQDPATAALLVTFKPSASSAEIVCLARGFMERFQVPALRLVNEATLAALATGVQTGIMVDIGEGSVSVTPLYEGYVLWETLRLERVGGHDLSRYLDYMLLSRTNEDFNQMVERRRVEYARRVKEGHCYVSRDFDAEARRAGHFKRKSMRVFEGARLSDKLAGRYEDCASRSHLEAAD 1188
P DHG+G N V++ELG+WR+R G+V+ G + YFDDFPCCVARP + GAD ELV+ AS +++A MY+ FR ED RL +A+ L+QD + + L+T+KP+A+ E++ LA +E +VPA+R+VNEA LAALA GV+ G++VDIGE VSVTP+++G+ + +R E GG D++++LDYMLLSRTNE FNQM +RRR+EY R +KE HCYV DF E G FKRK+MRV +GA+ S L+G YE C SR ++ D
Sbjct: 659 PADHGLGREGNTVVLELGAWRVRAGVVTPSG------------------EEGKSSSYFDDFPCCVARPSKEGADLGELVNGAS-SLAAPMYSKFR-----------------------------------------EEDTVRLADHAYGLLKQDSSLSPTLLTYKPTATVDEVLALASVLLEVHRVPAIRMVNEAQLAALAVGVKVGVIVDIGESGVSVTPIFDGFPVPPAVRSECCGGGDVTKFLDYMLLSRTNEHFNQMTDRRRLEYTREMKEEHCYVPLDFALEVEEYGAFKRKAMRVCKGAQASPMLSG-YEACDSRDFIDDTD 925
BLAST of mRNA_P-wetherbeei_contig6755.1.1 vs. uniprot
Match: W7TNT9_9STRA (Actin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNT9_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.080e-45 Identity = 110/335 (32.84%), Postives = 173/335 (51.64%), Query Frame = 1
Query: 175 LEAAAERLREPEDHGMGSGENLVIMELGSWRLRCGLVSLHGGXXXXXXXXXXXXXXXXXXXXXGNGYFDDFPCCVARPRRAGADTYELVSAASGAMSAGMYANFRAEGVFVGQDAWFCCMEHPDAALRSKLDMAGPYERGKLVPERAEDLWRLCGNAFRHLRQDPATAALLVTFKPSASSAEIVCLARGFMERFQVPALRLVNEATLAALATGVQTGIMVDIGEGSVSVTPLYEGYVLWETLRLERVGGHDLSRYLDYMLLSRTNEDFNQMVERRRVEYARRVKEGHCYVSRDFDAEARRAGHFKRKSMRV--FEGARLSDK---LAGRYEDCAS 1164
+E ++ + P G + +E+G+WR+R G V + +FPC +ARP +A AD +V AS A MY FR GVF+G+DAW+C +HPD LR L + P++R +L+ R DL L F L+VT+KP+++ E + E + ++R +NEAT+ + V T + +D+GE + V P+YE +L + + +GG DL++Y+ YMLLSR NE ++ +VER+ +E AR +KE H YV+ DF+ E R G F+R+ + V F A+++ + + GR D AS
Sbjct: 869 MEWSSSSWKPPTTFPGGDPTDFFFVEIGTWRIRAGWVEVGTSKSFQTV---------------------EFPCIIARPSKASADLTTIVQHASIKADA-MYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRLI--RPADLKLLLKYVFEKCEVCLTKTPLVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQIATEESVVPGRRLDMAS 1179
BLAST of mRNA_P-wetherbeei_contig6755.1.1 vs. uniprot
Match: A0A2G5T3C6_9PELO (Uncharacterized protein n=3 Tax=Caenorhabditis nigoni TaxID=1611254 RepID=A0A2G5T3C6_9PELO) HSP 1 Score: 89.7 bits (221), Expect = 6.430e-16 Identity = 50/168 (29.76%), Postives = 96/168 (57.14%), Query Frame = 1
Query: 565 LDMAGPYERGKLVP-ERAEDLWRLCGNAFRHLRQDPATAALLVTFKPSASSAEIVCLARGFMERFQVPALRLVNEATLAALATGVQTGIMVDIGEGSVSVTPLYEGYVLWETLRLERVGGHDLSRYLDYMLLSRTNEDFNQMVERRRVEYARRVKEGHCYVSRDFDAE 1065
++M+ P +RG ++ + A +LW +AF +LR P +++T P A++A+ + F E+F P + N+A ++ + +G TGI+++ GE + +TP+++G V+ + +GGH L+ YL M+ + + F V +E AR++KE YV++D++ E
Sbjct: 68 VEMSSPIQRGIVIDWDGATELWE---HAFNNLRITPKCHPMVLTESPFATNADREKMTEIFFEKFNTPGVCFANQAIMSLIGSGRTTGIVIESGENTTHITPIFKGRVITGAVNHLDIGGHQLTEYLTTMVSAERSHIFPNGVT---LEMARQIKENLGYVAQDYELE 229
BLAST of mRNA_P-wetherbeei_contig6755.1.1 vs. uniprot
Match: A0A0F7SJY3_PHARH (Actin actin-like protein n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SJY3_PHARH) HSP 1 Score: 84.7 bits (208), Expect = 2.870e-14 Identity = 61/176 (34.66%), Postives = 87/176 (49.43%), Query Frame = 1
Query: 547 AALRSKLDMAGPYERGKLVPERAEDLWRLCGNAFRH-LRQDPATAALLVTFKPSASSAEIVCLARGFMERFQVPALRLVNEATLAALATGVQTGIMVDIGEGSVSVTPLYEGYVLWETLRLERVGGHDLSRYLDYMLLSRTNEDFNQMVERRRVEYARRVKEGHCYVSRDFDAEAR 1071
A RS L++ P E G + + ED+ L FR L+ DPA +L+T P +A E F V + + +A L A G+QTG++VD G+G + P+YEGY L R V G D++RYL +LL R FN+ + E R +KE CY S D + + R
Sbjct: 103 AEHRSFLNVTHPMEHG--IVKNWEDMIHLWDYTFREKLQVDPAGRKVLLTEPPMNPKRNREKMAEVMFENFNVGGVYVAIQAVLTLYAQGLQTGVVVDSGDGVTHIVPVYEGYALPHLTRRLDVAGRDVTRYLIKLLLMR-GYAFNRTAD---FETVRGIKEKLCYTSYDLEQDKR 272
BLAST of mRNA_P-wetherbeei_contig6755.1.1 vs. uniprot
Match: A0A1Y3MVE0_PIRSE (Actin-related protein 2 n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3MVE0_PIRSE) HSP 1 Score: 79.0 bits (193), Expect = 2.640e-13 Identity = 56/189 (29.63%), Postives = 91/189 (48.15%), Query Frame = 1
Query: 481 NFRAEGVFVGQDAWFCCMEHPDAALRSKLDMAGPYERGKLVPERAEDLWRLCGNAF-RHLRQDPATAALLVTFKPSASSAEIVCLARGFMERFQVPALRLVNEATLAALATGVQTGIMVDIGEGSVSVTPLYEGYVLWETLRLERVGGHDLSRYLDYMLLSRTNEDFNQMVERRRVEYARRVKEGHCYV 1044
N + + VG++A A LR+ L++ P E G +V ED++ L F L+ DP +L+T + + + ER+ A+ + +A L G+QTG++VD G+G + P+YEG+ L R + G D++RYL +LL + FN + E R++KE CYV
Sbjct: 46 NVELKDIMVGEEA---------AELRTMLELKYPMENGIIV--NWEDMFHLWDYTFYEKLKIDPKQCKVLLTEPAQNPKNNRIKMVQAMFERYGFQAVYVAIQAVLTLYGQGIQTGVVVDSGDGVTHIVPIYEGFALPHLTRRLDIAGRDITRYLIKLLLLK-GYPFNSTAD---FETIRQMKEKLCYV 219
BLAST of mRNA_P-wetherbeei_contig6755.1.1 vs. uniprot
Match: UPI0018F66F78 (uncharacterized protein LOC119967165 isoform X1 n=2 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F66F78) HSP 1 Score: 82.8 bits (203), Expect = 2.980e-13 Identity = 59/180 (32.78%), Postives = 86/180 (47.78%), Query Frame = 1
Query: 538 HPDAALRSKLDMAGPYERGKLVP-ERAEDLWRLCGNAFRHLRQDPATAALLVT---FKPSASSAEIVCLARGFMERFQVPALRLVNEATLAALATGVQTGIMVDIGEGSVSVTPLYEGYVLWETLRLERVGGHDLSRYLDYMLLSRTNEDFNQMVERRRVEYARRVKEGHCYVSRDFDAE 1065
H +R L + P E G + E E +W +R LR DP +L+T P + +V + E F VP + +A LA ++G TGI +D G+G P+YEGY + ++ + G DL+ YL +L R FN ER E R +KE HCYV+ D++AE
Sbjct: 1657 HDAQHMRGVLSLHYPLEHGIVTDWEEIEKIWH--HTFYRQLRVDPQEHPILLTEAAMNPHQNRERMVEI---MFEVFNVPFSYVAMQAVLALYSSGRTTGITLDSGDGVTHTVPVYEGYSIPHAIQRLNLAGRDLTEYLRKLLKER-GYSFNTSAER---EIVRDIKEKHCYVAEDYEAE 1827
BLAST of mRNA_P-wetherbeei_contig6755.1.1 vs. uniprot
Match: UPI001BB24DFB (actin-5-like n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB24DFB) HSP 1 Score: 81.3 bits (199), Expect = 3.010e-13 Identity = 54/172 (31.40%), Postives = 85/172 (49.42%), Query Frame = 1
Query: 553 LRSKLDMAGPYERGKLVPERAEDLWRLCGNAF-RHLRQDPATAALLVTFKPSASSAEIVCLARGFMERFQVPALRLVNEATLAALATGVQTGIMVDIGEGSVSVTPLYEGYVLWETLRLERVGGHDLSRYLDYMLLSRTNEDFNQMVERRRVEYARRVKEGHCYVSRDFDAE 1065
+R L + P E G + +D+ ++ + F + LR DPA +L T P ++ A + E+F A + + L+ A+G +MVDIG+G +SV P+ EGY++ + GG DL++ + ML R F ER E R +KE CYV+ +FD E
Sbjct: 67 MRGLLSLRYPIEHG--IVTNWDDMEKIWHHTFYKELRTDPAECPVLFTDVPESTKAGREKTTQIMFEKFGAKAFHICTQGVLSHCASGRTMAVMVDIGDGVISVVPISEGYIITPAIHQVNFGGRDLTQIMMKMLNDR-GYSFVTTAER---EIVREIKENLCYVALEFDTE 232
BLAST of mRNA_P-wetherbeei_contig6755.1.1 vs. uniprot
Match: A0A835YLL4_9STRA (Actin-related protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLL4_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 3.280e-13 Identity = 61/179 (34.08%), Postives = 89/179 (49.72%), Query Frame = 1
Query: 547 AALRSKLDMAGPYERGKLVPERA--EDLWRLCGNAFRHLRQDPATAALLVTFKPSASSAEIVCLARGFMERFQVPALRLVNEATLAALATGVQTGIMVDIGEGSVSVTPLYEGYVLWETLRLERVGGHDLSRYLDYMLLSRTNEDFNQMVERRRVEYARRVKEGHCYVSRDFDAEARRA 1077
AA R+ LD P E G ++ A E+LW+ L+ DPA +L+T P S + E F A+ + +A L A G+QTG++VD G+G V P+Y+GYV + V G ++RY+ +LL R FN+ + E R++KE CYV+ D AE R A
Sbjct: 64 AAARASLDTTYPVENG-IIKNWADMEELWKY--TFHEKLKVDPAAHKILLTEPPLNPSRNRERMCERMFEGFGFGAVNVSIQAILTLYAQGLQTGVVVDTGDGVSHVIPVYDGYVPQNLICRLDVAGRHITRYMIKLLLLR-GYAFNRTAD---FETVRQIKEKLCYVAADIQAERRLA 235
BLAST of mRNA_P-wetherbeei_contig6755.1.1 vs. uniprot
Match: A0A0G4I989_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I989_9ALVE) HSP 1 Score: 80.5 bits (197), Expect = 5.930e-13 Identity = 58/184 (31.52%), Postives = 88/184 (47.83%), Query Frame = 1
Query: 532 MEHPDAALRSKLDMAGPYERGKLVPERAEDLWRLCGNAFR-HLRQDPATAALLVTFKPSASSAEIVCLARGFMERFQVPALRLVNEATLAALATGVQTGIMVDIGEGSVSVTPLYEGYVLWETLRLERVGGHDLSRYLDYMLLSRTNEDFNQMVERRRVEYARRVKEGHCYVSRDFDAEARRAG 1080
+EHP KL + P E ++ E D+ + + FR L P ALL+T P + E VP L+L + LA G +G++VD+G+G V P+ +GYV+ +R GG +++ L +L+ + F R E ARR+KE HC+VS+D +AEA G
Sbjct: 60 LEHP------KLRVTNPMEHSQI--EDMADMTEIWQHVFRDRLETSPEDQALLMTEPPFNPRPVREKMGEALFETLGVPHLQLAVASLLALYGEGRTSGLVVDVGDGGVLALPVQQGYVMSHLMRRNEFGGAEVTDRLRTLLVEKQISLFKN----RHYEIARRMKESHCFVSQDPEAEAEGRG 231 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6755.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6755.1.1 >prot_P-wetherbeei_contig6755.1.1 ID=prot_P-wetherbeei_contig6755.1.1|Name=mRNA_P-wetherbeei_contig6755.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=396bp SAASGGGGASSGGGSDYSGGLGSTTATPFFLQSPPHKRSAWGGGGGHGRSback to top mRNA from alignment at P-wetherbeei_contig6755:1..2144- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6755.1.1 ID=mRNA_P-wetherbeei_contig6755.1.1|Name=mRNA_P-wetherbeei_contig6755.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2144bp|location=Sequence derived from alignment at P-wetherbeei_contig6755:1..2144- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6755:1..2144- >mRNA_P-wetherbeei_contig6755.1.1 ID=mRNA_P-wetherbeei_contig6755.1.1|Name=mRNA_P-wetherbeei_contig6755.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1188bp|location=Sequence derived from alignment at P-wetherbeei_contig6755:1..2144- (Phaeothamnion wetherbeei SAG_119_79)back to top |