mRNA_P-wetherbeei_contig6722.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6722.2.1
Unique NamemRNA_P-wetherbeei_contig6722.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6722.2.1 vs. uniprot
Match: R1FNS3_EMIHU (HemK methyltransferase family member 1 n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FNS3_EMIHU)

HSP 1 Score: 138 bits (347), Expect = 2.900e-38
Identity = 76/132 (57.58%), Postives = 85/132 (64.39%), Query Frame = 1
Query:    1 LPNAACVAIDPNPVAVSLALRNAARVGVADRYACLRGSAAQVFAAAAAELPQLGGFDFIVSNPPYIPEGDMVGLPPDVVCFEDREALCGGGDGLDVVRSIVAAAPTLLRRGGSRRLWLEVDPSHPPLIERWL 396
            LP A CV ID +  A +LA RNA   G+ DRY     SAA V    AA  P    FD +VSNPPYIP  D   L P+V   ED  ALCGG DGLDVVR ++ AAP LLR+GG R +WLEVDPSHPPLIE WL
Sbjct:   73 LPAARCVGIDVSASAAALAARNAELCGLDDRY-----SAAAVDGGVAAWRPSDQRFDVVVSNPPYIPRADYEQLEPEVAGHEDERALCGGDDGLDVVREVLLAAPRLLRQGGPRAVWLEVDPSHPPLIEAWL 199          
BLAST of mRNA_P-wetherbeei_contig6722.2.1 vs. uniprot
Match: A0A7S4C115_CHRCT (Peptide chain release factor N(5)-glutamine methyltransferase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C115_CHRCT)

HSP 1 Score: 139 bits (349), Expect = 3.630e-36
Identity = 74/130 (56.92%), Postives = 87/130 (66.92%), Query Frame = 1
Query:    7 NAACVAIDPNPVAVSLALRNAARVGVADRYACLRGSAAQVFAAAAAELPQLGGFDFIVSNPPYIPEGDMVGLPPDVVCFEDREALCGGGDGLDVVRSIVAAAPTLLRRGGSRRLWLEVDPSHPPLIERWL 396
            +A C+ ID +  AV LA RNA  + +  RY+ +  +      A+ AE  Q   FD IVSNPPYIP+ DM  L P+V  FEDR ALCGG DGLDVVR IV AAP LLR GG   +WLEVDPSHPPL+ERWL
Sbjct:  320 DATCIGIDISEKAVDLARRNAISLDLEGRYSAVLDAGG---VASFAESEQTPRFDVIVSNPPYIPQADMESLEPEVAGFEDRRALCGGDDGLDVVRQIVHAAPRLLRSGGQGTIWLEVDPSHPPLLERWL 446          
BLAST of mRNA_P-wetherbeei_contig6722.2.1 vs. uniprot
Match: A0A835YWT7_9STRA (PrmC_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWT7_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.470e-34
Identity = 77/135 (57.04%), Postives = 90/135 (66.67%), Query Frame = 1
Query:    1 LPNAACVAIDPNPVAVSLALRNAARVGVADRYACLRGSAAQVFAAAAAELPQLGGFDFIVSNPPYIPEGDMVGLPPDVVCFEDREALCGG-GDGLDVVRSIVAAAPTLL---RRGGSRRLWLEVDPSHPPLIERW 393
            LP A CVA D +  AV L+L NA++VGVADRYAC+   A+ +        P  G F FIVSNPPYIP+ DM GL  DV  FED  ALCGG GDGL VVR +V  AP+LL     GG R +WLEVD SHPPL+E+W
Sbjct: 1208 LPGAMCVACDVSADAVRLSLENASKVGVADRYACVLSPASSL-----QPPPPGGAFHFIVSNPPYIPQRDMAGLDEDVRGFEDWGALCGGAGDGLGVVREVVTKAPSLLLPTSEGGLRHIWLEVDSSHPPLMEQW 1337          
BLAST of mRNA_P-wetherbeei_contig6722.2.1 vs. uniprot
Match: A0A7S4NLJ6_9EUKA (Peptide chain release factor N(5)-glutamine methyltransferase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4NLJ6_9EUKA)

HSP 1 Score: 127 bits (319), Expect = 4.880e-33
Identity = 69/127 (54.33%), Postives = 81/127 (63.78%), Query Frame = 1
Query:   16 CVAIDPNPVAVSLALRNAARVGVADRYACLRGSAAQVFAAAAAELP--QLGGFDFIVSNPPYIPEGDMVGLPPDVVCFEDREALCGGGDGLDVVRSIVAAAPTLLRRGGSRRLWLEVDPSHPPLIER 390
            CV +D    A  LA RNA  +G+A RY  +      + A   A  P  + G FD IVSNPPYIP+ DM  L P+VV  ED  ALCGG DGLDVVR ++ AAP  LRR G R +WLEVDPSHPPLIE+
Sbjct:  183 CVGLDIRSEATELATRNAEALGLAARYRAV------LVAGGIAHFPSGESGAFDVIVSNPPYIPKADMATLEPEVVDHEDEGALCGGADGLDVVRQLLVAAPMQLRRDGPRAIWLEVDPSHPPLIEQ 303          
BLAST of mRNA_P-wetherbeei_contig6722.2.1 vs. uniprot
Match: D8LI66_ECTSI (Similar to HemK methyltransferase family member 1 isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI66_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 8.910e-33
Identity = 74/154 (48.05%), Postives = 88/154 (57.14%), Query Frame = 1
Query:    1 LPNAA-CVAIDPNPVAVSLALRNAARVGVADRYACLRGSAAQ---------------------VFAAAAAELPQLGGFDFIVSNPPYIPEGDMVGLPPDVVCFEDREALCGGGDGLDVVRSIVAAAPTLLRRGGSRRLWLEVDPSHPPLIERWL 396
            LP+ A CVA+D    AV L+ RNAAR G+  RY+C   + A+                     V      +L   G FDF+VSNPPYIP  DM GLP DV   ED  AL GG DGLDVVR IV   P LLR+GG R+LW+EVD SHP  ++RWL
Sbjct:  130 LPSGARCVAVDTQESAVRLSRRNAARTGLQARYSCFHAAVAELAPSEKGSVTTPAIDRPPRSSVEKGGREDLDLDGSFDFVVSNPPYIPTRDMEGLPRDVADHEDSVALDGGEDGLDVVRDIVRLCPRLLRKGGPRQLWMEVDTSHPEAMQRWL 283          
BLAST of mRNA_P-wetherbeei_contig6722.2.1 vs. uniprot
Match: A0A0M0JRK9_9EUKA (Peptide chain release factor N(5)-glutamine methyltransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JRK9_9EUKA)

HSP 1 Score: 126 bits (317), Expect = 9.450e-33
Identity = 72/132 (54.55%), Postives = 82/132 (62.12%), Query Frame = 1
Query:    1 LPNAACVAIDPNPVAVSLALRNAARVGVADRYACLRGSAAQVFAAAAAELPQLGGFDFIVSNPPYIPEGDMVGLPPDVVCFEDREALCGGGDGLDVVRSIVAAAPTLLRRGGSRRLWLEVDPSHPPLIERWL 396
            LPNA CV ID  P A +L+  NA R G++ RY  L          AA +L     FD IVSNPPYIP  DM  L P+V   ED  ALCGG DGLDVVR ++ A P LLR  G R +WLEVD SHPP+IERWL
Sbjct:  173 LPNARCVGIDICPTAHALSKANAERCGLSARYESLLVDGG----IAACDLAPRR-FDVIVSNPPYIPRADMATLEPEVAWHEDAGALCGGSDGLDVVRELLLATPRLLRADGPRSIWLEVDTSHPPVIERWL 299          
BLAST of mRNA_P-wetherbeei_contig6722.2.1 vs. uniprot
Match: A0A6H5KUS7_9PHAE (Methyltranfer_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS7_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 4.780e-31
Identity = 72/150 (48.00%), Postives = 86/150 (57.33%), Query Frame = 1
Query:   10 AACVAIDPNPVAVSLALRNAARVGVADRYACLRGSAAQVF-------AAAAAELPQLGG--------------FDFIVSNPPYIPEGDMVGLPPDVVCFEDREALCGGGDGLDVVRSIVAAAPTLLRRGGSRRLWLEVDPSHPPLIERWL 396
            A CVA+D    AV L+ RNAAR G+  RY+C   + A++           A + PQ  G              FDF+VSNPPYIP  DM  LP DV   ED  AL GG DGLDVVR IV   P LLR+GG R+LW+EVD SHP  ++RWL
Sbjct:  327 ARCVAVDTQESAVRLSRRNAARTGLQARYSCFHAAVAELAPRENGSATTPAIDRPQSSGVEKGGRGDLDFDGSFDFVVSNPPYIPTRDMGSLPRDVADHEDSVALDGGEDGLDVVRDIVRLCPRLLRKGGPRQLWMEVDTSHPEAMQRWL 476          
BLAST of mRNA_P-wetherbeei_contig6722.2.1 vs. uniprot
Match: A7RQR0_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RQR0_NEMVE)

HSP 1 Score: 117 bits (293), Expect = 2.350e-30
Identity = 68/129 (52.71%), Postives = 79/129 (61.24%), Query Frame = 1
Query:   19 VAIDPNPVAVSLALRNAARVGVADR---YACLRGSAAQVFAAAAAELPQLGGFDFIVSNPPYIPEGDMVGLPPDVVCFEDREALCGGGDGLDVVRSIVAAAPTLLRRGGSRRLWLEVDPSHPPLIERWL 396
            VAID +PVAV L   NA R G+  R   Y C  G               L  FD IVSNPPYIPE DM  L P+V  +EDR+ALCGG DG+DV+R I+AAAP LL R GS  +WLE D +HPPL+  WL
Sbjct:   78 VAIDVSPVAVKLTRLNAHRCGMNCRLELYHCPIGELNMT----------LKKFDMIVSNPPYIPEHDMTLLQPEVASYEDRQALCGGKDGMDVIRQILAAAPQLLNRNGS--IWLETDLTHPPLVRDWL 194          
BLAST of mRNA_P-wetherbeei_contig6722.2.1 vs. uniprot
Match: A0A2B4RYK0_STYPI (Peptide chain release factor N(5)-glutamine methyltransferase n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RYK0_STYPI)

HSP 1 Score: 117 bits (292), Expect = 4.970e-29
Identity = 64/129 (49.61%), Postives = 77/129 (59.69%), Query Frame = 1
Query:   16 CVAIDPNPVAVSLALRNAARVGVADRYACLRGSAAQVFAAAAAELPQLGG--FDFIVSNPPYIPEGDMVGLPPDVVCFEDREALCGGGDGLDVVRSIVAAAPTLLRRGGSRRLWLEVDPSHPPLIERWL 396
            CVAID N  AV+L   NA R  V+DR   L      V       LP LG   FD I+SNPPYIP  DM  L P++  +ED  ALCGG DGLDV+R I+  +P LL+ G    +WLEVD SHP LI+ W+
Sbjct:  191 CVAIDKNKAAVNLTRNNANRCNVSDRIELLHADLQSV-------LPLLGSRKFDAIISNPPYIPAKDMALLQPEISRYEDEHALCGGPDGLDVIRDILRISPVLLKPGRRSSVWLEVDISHPKLIDEWI 312          
BLAST of mRNA_P-wetherbeei_contig6722.2.1 vs. uniprot
Match: UPI00138FBA28 (MTRF1L release factor glutamine methyltransferase isoform X1 n=2 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FBA28)

HSP 1 Score: 116 bits (291), Expect = 5.240e-29
Identity = 68/129 (52.71%), Postives = 81/129 (62.79%), Query Frame = 1
Query:   19 VAIDPNPVAVSLALRNAARVGVADR---YACLRGSAAQVFAAAAAELPQLGGFDFIVSNPPYIPEGDMVGLPPDVVCFEDREALCGGGDGLDVVRSIVAAAPTLLRRGGSRRLWLEVDPSHPPLIERWL 396
            VAID +PVAV L   NA R G+  R   Y C      + F     + P    FD IVSNPPYIPE DM  L P+V  +EDR+ALCGG DG+DV+R I+AAAP LL R GS  +WLE D +HPPL+  WL
Sbjct:  178 VAIDVSPVAVKLTRLNAHRCGMNCRLELYHC----PIEYF-----QHPHEKKFDMIVSNPPYIPEHDMTLLQPEVASYEDRQALCGGKDGMDVIRQILAAAPQLLNRNGS--IWLETDLTHPPLVRDWL 295          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6722.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R1FNS3_EMIHU2.900e-3857.58HemK methyltransferase family member 1 n=1 Tax=Emi... [more]
A0A7S4C115_CHRCT3.630e-3656.92Peptide chain release factor N(5)-glutamine methyl... [more]
A0A835YWT7_9STRA1.470e-3457.04PrmC_N domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S4NLJ6_9EUKA4.880e-3354.33Peptide chain release factor N(5)-glutamine methyl... [more]
D8LI66_ECTSI8.910e-3348.05Similar to HemK methyltransferase family member 1 ... [more]
A0A0M0JRK9_9EUKA9.450e-3354.55Peptide chain release factor N(5)-glutamine methyl... [more]
A0A6H5KUS7_9PHAE4.780e-3148.00Methyltranfer_dom domain-containing protein n=1 Ta... [more]
A7RQR0_NEMVE2.350e-3052.71Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A2B4RYK0_STYPI4.970e-2949.61Peptide chain release factor N(5)-glutamine methyl... [more]
UPI00138FBA285.240e-2952.71MTRF1L release factor glutamine methyltransferase ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6722contigP-wetherbeei_contig6722:2815..3330 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2903.EOD35014
Preferred nameHEMK1
PFAMsMTS
Model size396
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC03279
KEGG koko:K02493
KEGG ReactionR10806
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
Exons2
Evalue4.76e-39
EggNOG OGsCOG2890@1|root,KOG2904@2759|Eukaryota
EC2.1.1.297
DescriptionhemK methyltransferase family member 1
Cds size396
COG categoryJ
BRITEko00000,ko01000,ko03012
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186932.4834015-CDS-P-wetherbeei_contig6722:2814..31041683186932.4834015-CDS-P-wetherbeei_contig6722:2814..3104Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6722 2815..3104 -
1683186932.4930642-CDS-P-wetherbeei_contig6722:3224..33301683186932.4930642-CDS-P-wetherbeei_contig6722:3224..3330Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6722 3225..3330 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6722.2.1prot_P-wetherbeei_contig6722.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6722 2815..3330 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6722.2.1

>prot_P-wetherbeei_contig6722.2.1 ID=prot_P-wetherbeei_contig6722.2.1|Name=mRNA_P-wetherbeei_contig6722.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp
LPNAACVAIDPNPVAVSLALRNAARVGVADRYACLRGSAAQVFAAAAAEL
PQLGGFDFIVSNPPYIPEGDMVGLPPDVVCFEDREALCGGGDGLDVVRSI
VAAAPTLLRRGGSRRLWLEVDPSHPPLIERWL
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mRNA from alignment at P-wetherbeei_contig6722:2815..3330-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6722.2.1 ID=mRNA_P-wetherbeei_contig6722.2.1|Name=mRNA_P-wetherbeei_contig6722.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig6722:2815..3330- (Phaeothamnion wetherbeei SAG_119_79)
CTACCGAATGCAGCATGCGTTGCAATCGACCCGAACCCCGTTGCCGTCTC GCTTGCGCTGCGCAACGCGGCGCGCGTCGGCGTCGCCGATCGCTACGCCT GCCTCCGTCTACGCATTGAGGATGTCGTGCCGGTCGGATCTTCCGAAGGC GATGATGGCGCTGCAACCGTCGAAGCTGGCACCCTTGTTGCGCTCGCGGC GGGTGTAGCCGAAGCGCCAGAAAGAGGCGGTAGCGCCGCGCAAGTTTTCG CTGCCGCCGCTGCCGAATTGCCGCAGCTGGGTGGTTTTGACTTCATTGTG AGCAACCCACCGTACATTCCGGAGGGCGACATGGTAGGGCTCCCCCCGGA CGTGGTGTGCTTTGAAGACCGCGAGGCGCTCTGTGGCGGCGGCGACGGAC TCGACGTCGTCCGCAGCATCGTGGCGGCCGCCCCAACGCTGCTGCGGCGC GGCGGTTCGCGGCGGTTGTGGCTCGAGGTAGACCCTTCCCACCCGCCGCT GATCGAGCGATGGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6722:2815..3330-

>mRNA_P-wetherbeei_contig6722.2.1 ID=mRNA_P-wetherbeei_contig6722.2.1|Name=mRNA_P-wetherbeei_contig6722.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig6722:2815..3330- (Phaeothamnion wetherbeei SAG_119_79)
CTACCGAATGCAGCATGCGTTGCAATCGACCCGAACCCCGTTGCCGTCTC
GCTTGCGCTGCGCAACGCGGCGCGCGTCGGCGTCGCCGATCGCTACGCCT
GCCTCCGCGGTAGCGCCGCGCAAGTTTTCGCTGCCGCCGCTGCCGAATTG
CCGCAGCTGGGTGGTTTTGACTTCATTGTGAGCAACCCACCGTACATTCC
GGAGGGCGACATGGTAGGGCTCCCCCCGGACGTGGTGTGCTTTGAAGACC
GCGAGGCGCTCTGTGGCGGCGGCGACGGACTCGACGTCGTCCGCAGCATC
GTGGCGGCCGCCCCAACGCTGCTGCGGCGCGGCGGTTCGCGGCGGTTGTG
GCTCGAGGTAGACCCTTCCCACCCGCCGCTGATCGAGCGATGGCTG
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