mRNA_P-wetherbeei_contig6700.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6700.1.1
Unique NamemRNA_P-wetherbeei_contig6700.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6700.1.1 vs. uniprot
Match: A0A3C0TU37_9PROT (Cation transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TU37_9PROT)

HSP 1 Score: 409 bits (1052), Expect = 3.120e-141
Identity = 209/289 (72.32%), Postives = 238/289 (82.35%), Query Frame = 1
Query:   58 DAVHDMTGRNERRVLQAMLLTAGFMAVEVAGGLWSGSLALLADAGHMLTDSAALALAWLAFRITRRPADMLRSYGYHRFQVLAAFVNSFIMLGLAAWIAVEAVQRIAEPVPILPWPVLGIAVVGLAVNLGSFALLHSGDRENLNMRGAALHVMGDILGSLAAIMAAIIIIYTGWMSADPILSLLSAGLILRGAWSIVRRSTHILLEGAPEDFDGVAVHDELLKALPDIKDVHHIHAWSLGDGNTLLTLHAAVQPGTDQSRLLAHIKAVLAERFGIRHATVQIETCACPD 924
            D  H + GRNERRVL A +L+AGFM  E AGGL  GSLALLADA HMLTDSAALALAW+AFRITRRPAD  RSYGYHRFQVLAAF+N   M+ L+ WIAVEA+ RI +PV I PWPV+ IA +GL VN+GS+ LLHSG+ ENLNMRGAALHVMGDILGS+AAI AA+II+ TGW  ADP+LSLLSA +ILR AW IVRR+THILLEGAPEDFD  A+  EL + LP+++DVHHIHAW+LGDG TLLTLHAA + G+D   LL  IK VLAERFGIRHATVQ+ET ACPD
Sbjct:   16 DPGHAVAGRNERRVLLAFVLSAGFMTAEAAGGLLFGSLALLADAAHMLTDSAALALAWIAFRITRRPADARRSYGYHRFQVLAAFLNGAAMIALSFWIAVEAILRITQPVEISPWPVMLIATLGLGVNIGSYLLLHSGEGENLNMRGAALHVMGDILGSVAAIAAALIILGTGWTPADPLLSLLSAMVILRSAWGIVRRTTHILLEGAPEDFDSAALRQELTRLLPELEDVHHIHAWTLGDGATLLTLHAAAKSGSDPELLLRQIKDVLAERFGIRHATVQMETRACPD 304          
BLAST of mRNA_P-wetherbeei_contig6700.1.1 vs. uniprot
Match: A0A352KAI1_9PROT (Cation transporter n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KAI1_9PROT)

HSP 1 Score: 345 bits (886), Expect = 2.900e-116
Identity = 168/281 (59.79%), Postives = 218/281 (77.58%), Query Frame = 1
Query:   85 NERRVLQAMLLTAGFMAVEVAGGLWSGSLALLADAGHMLTDSAALALAWLAFRITRRPADMLRSYGYHRFQVLAAFVNSFIMLGLAAWIAVEAVQRIAEPVPILPWPVLGIAVVGLAVNLGSFALLHSGDRENLNMRGAALHVMGDILGSLAAIMAAIIIIYTGWMSADPILSLLSAGLILRGAWSIVRRSTHILLEGAPEDFDGVAVHDELLKALPDIKDVHHIHAWSLGDGNTLLTLHAAVQPGTDQSRLLAHIKAVLAERFGIRHATVQIETCACPDR 927
            N+RRVL AMLLT GFM  EV GGL SGSLALLADAGHMLTDSAALALAWLAFR+ +RPAD  RS+GY RF+VLAAF N+  +  + AWI  EAVQR+ +PV I   P+LG+A +GL VN+ +F +LH G  +NLN+RGA++HV+ D+LGS+AAIMAA++I+ TGW   DPILS++ A LI+R AW ++++STHILLEG PE+ D  A++  L +A+P++ DVHHIHAWSL D  T++TLHA +   +DQS LL  +KA+LA++F + HAT+Q E   CPDR
Sbjct:    7 NQRRVLFAMLLTGGFMVAEVIGGLLSGSLALLADAGHMLTDSAALALAWLAFRVAQRPADARRSFGYRRFEVLAAFANALALFAIVAWILFEAVQRLLDPVEIHGAPMLGVATIGLLVNIVAFLILHRGQEQNLNIRGASMHVLSDLLGSVAAIMAALVILATGWTPVDPILSVIVALLIIRSAWKLLQQSTHILLEGTPEEIDRDAIYRHLTEAIPEVIDVHHIHAWSLSDSQTVMTLHAQISEQSDQSVLLERMKALLAQQFNVSHATIQFEFSGCPDR 287          
BLAST of mRNA_P-wetherbeei_contig6700.1.1 vs. uniprot
Match: UPI001421E584 (cation diffusion facilitator family transporter n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001421E584)

HSP 1 Score: 343 bits (880), Expect = 3.950e-115
Identity = 172/280 (61.43%), Postives = 210/280 (75.00%), Query Frame = 1
Query:   85 NERRVLQAMLLTAGFMAVEVAGGLWSGSLALLADAGHMLTDSAALALAWLAFRITRRPADMLRSYGYHRFQVLAAFVNSFIMLGLAAWIAVEAVQRIAEPVPILPWPVLGIAVVGLAVNLGSFALLHSGDRENLNMRGAALHVMGDILGSLAAIMAAIIIIYTGWMSADPILSLLSAGLILRGAWSIVRRSTHILLEGAPEDFDGVAVHDELLKALPDIKDVHHIHAWSLGDGNTLLTLHAAVQPGTDQSRLLAHIKAVLAERFGIRHATVQIETCACPD 924
            NE+RVL A +LTAGFM VEV GGL SGSLALLADA HMLTD+AAL LAW AFR+ RRPAD  RSYGYHR QVLAAFVN  +++ +  WI +EA+ R+ EPVP+  W +L +A +GL VN+ +FA+LH GDR+NLNMRGAA HV+GD+LGS AAI+ A+II++TGWM  DP+LS+L   L+LR AW +VR S HI+LEG P D D  A+   L++A+P+++DVHHIHAWSL     LLTLHA V    D    L  IK VLAERF I H+TVQIE  AC D
Sbjct:   23 NEKRVLWAFVLTAGFMGVEVVGGLISGSLALLADAAHMLTDAAALGLAWFAFRVARRPADTRRSYGYHRGQVLAAFVNGGVLIAVVGWIFIEAIARLREPVPVQGWTMLVVAGLGLVVNIAAFAILHGGDRQNLNMRGAAAHVLGDLLGSAAAIVGALIILWTGWMPIDPLLSMLVGLLVLRSAWFVVRESAHIMLEGTPADIDPAALRRTLMEAVPELEDVHHIHAWSLTPERPLLTLHARVTARADHQATLESIKKVLAERFSIDHSTVQIEREACGD 302          
BLAST of mRNA_P-wetherbeei_contig6700.1.1 vs. uniprot
Match: UPI0019037A99 (cation diffusion facilitator family transporter n=1 Tax=Rhodovibrio sodomensis TaxID=1088 RepID=UPI0019037A99)

HSP 1 Score: 337 bits (865), Expect = 1.630e-112
Identity = 173/280 (61.79%), Postives = 210/280 (75.00%), Query Frame = 1
Query:   85 NERRVLQAMLLTAGFMAVEVAGGLWSGSLALLADAGHMLTDSAALALAWLAFRITRRPADMLRSYGYHRFQVLAAFVNSFIMLGLAAWIAVEAVQRIAEPVPILPWPVLGIAVVGLAVNLGSFALLHSGDRENLNMRGAALHVMGDILGSLAAIMAAIIIIYTGWMSADPILSLLSAGLILRGAWSIVRRSTHILLEGAPEDFDGVAVHDELLKALPDIKDVHHIHAWSLGDGNTLLTLHAAVQPGTDQSRLLAHIKAVLAERFGIRHATVQIETCACPD 924
            N+RRV  AML+T GFMAVEVAGGL SGSLALLADAGHMLTD+A+LALAW AF++ R+PAD  RSYGY RFQVLAAFVN   +L +  WIAVEAV R+  P P++   ++ +AV+GL VNL +F LLH GD+ NLN+RGAALHVMGD+LGS+AAI A ++I+ TGW   DP+LSLL AGLILR AW +VR+S HILLEG P   D   +  EL  A+P I DVHH+HAWSL     L+TLHA V+ G D SR+L  IK  L+ERF + H+TVQ+E   C D
Sbjct:   34 NQRRVFWAMLVTGGFMAVEVAGGLISGSLALLADAGHMLTDTASLALAWFAFKLGRKPADNARSYGYQRFQVLAAFVNGATLLAIVGWIAVEAVGRLLNPQPVMGATMMAVAVLGLVVNLVAFRLLHGGDQHNLNLRGAALHVMGDLLGSVAAIAAGVVILTTGWTPIDPLLSLLVAGLILRSAWMLVRQSGHILLEGTPSHLDIEEIKRELPAAVPAISDVHHVHAWSLTAERPLVTLHANVRTGADHSRVLQAIKTHLSERFAVEHSTVQLEPGPCAD 313          
BLAST of mRNA_P-wetherbeei_contig6700.1.1 vs. uniprot
Match: UPI0004ADC85C (cation diffusion facilitator family transporter n=1 Tax=Rhodovibrio salinarum TaxID=1087 RepID=UPI0004ADC85C)

HSP 1 Score: 337 bits (864), Expect = 2.470e-112
Identity = 172/280 (61.43%), Postives = 209/280 (74.64%), Query Frame = 1
Query:   85 NERRVLQAMLLTAGFMAVEVAGGLWSGSLALLADAGHMLTDSAALALAWLAFRITRRPADMLRSYGYHRFQVLAAFVNSFIMLGLAAWIAVEAVQRIAEPVPILPWPVLGIAVVGLAVNLGSFALLHSGDRENLNMRGAALHVMGDILGSLAAIMAAIIIIYTGWMSADPILSLLSAGLILRGAWSIVRRSTHILLEGAPEDFDGVAVHDELLKALPDIKDVHHIHAWSLGDGNTLLTLHAAVQPGTDQSRLLAHIKAVLAERFGIRHATVQIETCACPD 924
            N+RRV  AML+T GFM VEVAGGL SGSLALLADAGHMLTD+A+LALAW AF++ R+PAD  RSYGY RFQVLAAFVN   +L +  WIAVEAV R+  P P++   ++G+A++GL VNL +F LLH GD+ NLN+RGAALHV+GD+LGS+AAI AAI+I+ TGW   DP+LSLL A LILR AW +VR+S+HILLEG P   D   +  EL  A+P I DVHH+HAWSL     L+TLHA V  G D  R+L  IK  LAERF + H+TVQ+E   C D
Sbjct:   32 NQRRVFWAMLITGGFMTVEVAGGLISGSLALLADAGHMLTDTASLALAWFAFQLGRKPADKARSYGYQRFQVLAAFVNGATLLAIVGWIAVEAVGRLLNPQPVMGSAMMGVAILGLVVNLVAFRLLHGGDQHNLNLRGAALHVLGDLLGSVAAIAAAIVILTTGWTPIDPLLSLLVAALILRSAWMLVRQSSHILLEGTPGHLDIEEIKRELPAAVPGISDVHHVHAWSLTAERPLVTLHANVHEGADHGRVLQAIKTHLAERFSVEHSTVQLEAGPCAD 311          
BLAST of mRNA_P-wetherbeei_contig6700.1.1 vs. uniprot
Match: A0A843RGA7_9PROT (Cation diffusion facilitator family transporter n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RGA7_9PROT)

HSP 1 Score: 333 bits (853), Expect = 5.470e-111
Identity = 173/280 (61.79%), Postives = 206/280 (73.57%), Query Frame = 1
Query:   85 NERRVLQAMLLTAGFMAVEVAGGLWSGSLALLADAGHMLTDSAALALAWLAFRITRRPADMLRSYGYHRFQVLAAFVNSFIMLGLAAWIAVEAVQRIAEPVPILPWPVLGIAVVGLAVNLGSFALLHSGDRENLNMRGAALHVMGDILGSLAAIMAAIIIIYTGWMSADPILSLLSAGLILRGAWSIVRRSTHILLEGAPEDFDGVAVHDELLKALPDIKDVHHIHAWSLGDGNTLLTLHAAVQPGTDQSRLLAHIKAVLAERFGIRHATVQIETCACPD 924
            NE RVL A++LTAGFM VEVAGGL SGSLALLADA HMLTD+AALALAW+AFRI RRPAD  RSYGYHR QVLAAFVN  +++ + A IA+EAVQR+  P P+  W +L +A +GL VN+ +  +LH GDR NLN+RGAA HV+GD+LGS AA++ AI+I+ TGWM  DPILS+L   L+LR AW IVR S HILLEG P   D   +   LL+ +P ++DVHHIHAWSL     LLTLHA V    D   +L  IK VLA RFGI H+TVQIE  AC D
Sbjct:   26 NETRVLWALVLTAGFMVVEVAGGLISGSLALLADAAHMLTDAAALALAWIAFRIARRPADPKRSYGYHRGQVLAAFVNGAVLIVIVAGIAIEAVQRLLAPQPVEGWIMLAVAALGLLVNVAALLILHGGDRRNLNLRGAAAHVLGDLLGSAAAVIGAIVILRTGWMPIDPILSVLVGLLVLRSAWLIVRESAHILLEGTPAQVDPQRLRQALLEDIPALQDVHHIHAWSLTSERPLLTLHARVGQSADSQAVLKRIKEVLASRFGIDHSTVQIERDACGD 305          
BLAST of mRNA_P-wetherbeei_contig6700.1.1 vs. uniprot
Match: A0A7C5CNV1_9GAMM (Cation transporter n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C5CNV1_9GAMM)

HSP 1 Score: 330 bits (846), Expect = 3.670e-110
Identity = 174/288 (60.42%), Postives = 210/288 (72.92%), Query Frame = 1
Query:   64 VHDMTGRN-ERRVLQAMLLTAGFMAVEVAGGLWSGSLALLADAGHMLTDSAALALAWLAFRITRRPADMLRSYGYHRFQVLAAFVNSFIMLGLAAWIAVEAVQRIAEPVPILPWPVLGIAVVGLAVNLGSFALLHSGDRENLNMRGAALHVMGDILGSLAAIMAAIIIIYTGWMSADPILSLLSAGLILRGAWSIVRRSTHILLEGAPEDFDGVAVHDELLKALPDIKDVHHIHAWSLGDGNTLLTLHAAVQPGTDQSRLLAHIKAVLAERFGIRHATVQIETCACPD 924
             HD   R+  RR+L A+ LT GFM  EV GGL SGSLALLADAGHMLTD+ +LALAWLA RI+RRPAD LRSYGYHR Q+LAAF N    + L  WI VEAVQR+ EP PIL   ++ +AV+GL VN+ +FALLH+GD  NLN+R AALHV+GD+LGS+AAI+AA++I++TGW   DP+LS+L A LIL  AW IVR S HILLEG P   D  AV   L + +P++ DVHH+H WSL    TLLT+H  V P  D + LL  IKA+LAERF IRH+TVQIE   C D
Sbjct:    2 AHDHDHRHGSRRLLFALTLTGGFMVAEVVGGLLSGSLALLADAGHMLTDTVSLALAWLATRISRRPADRLRSYGYHRMQILAAFANGVFFIFLVGWIGVEAVQRLLEPRPILGGLMMWVAVLGLLVNVVAFALLHTGDHGNLNIRAAALHVLGDLLGSVAAIVAAVVILFTGWTPIDPLLSILVALLILNSAWRIVRESGHILLEGTPPQVDVEAVTGTLHREIPELLDVHHLHIWSLTPDRTLLTMHVKVPPEADIAHLLVRIKALLAERFAIRHSTVQIEPGDCVD 289          
BLAST of mRNA_P-wetherbeei_contig6700.1.1 vs. uniprot
Match: A0A523K6L8_9GAMM (Cation diffusion facilitator family transporter n=2 Tax=Bacteria TaxID=2 RepID=A0A523K6L8_9GAMM)

HSP 1 Score: 329 bits (844), Expect = 4.270e-110
Identity = 164/272 (60.29%), Postives = 209/272 (76.84%), Query Frame = 1
Query:  109 MLLTAGFMAVEVAGGLWSGSLALLADAGHMLTDSAALALAWLAFRITRRPADMLRSYGYHRFQVLAAFVNSFIMLGLAAWIAVEAVQRIAEPVPILPWPVLGIAVVGLAVNLGSFALLHSGDRENLNMRGAALHVMGDILGSLAAIMAAIIIIYTGWMSADPILSLLSAGLILRGAWSIVRRSTHILLEGAPEDFDGVAVHDELLKALPDIKDVHHIHAWSLGDGNTLLTLHAAVQPGTDQSRLLAHIKAVLAERFGIRHATVQIETCACPD 924
            MLLT GFMAVEVAGGL SGSLALLADAGHMLTD+AAL  AW+AFR+ RRPAD  RSYGYHRFQ+LAAFVN  +++ + AWI  EA+QR+ +PV +L   +L +A VGLAVNL SFA+LH G+RENLN+RGA LHV+GD+LGS+AAI+AA++II TGW   DP+LS+L A LI R AW +VR+STH+LLEG P + D   +  EL+ A+P++ DVHH+H W+L  G  ++TLHA V+ G +  ++L  + +V  ERFG+ H TVQIE   C D
Sbjct:    1 MLLTGGFMAVEVAGGLISGSLALLADAGHMLTDAAALCFAWIAFRLARRPADARRSYGYHRFQILAAFVNGAVLMVIVAWIGFEALQRLRQPVEVLGGLMLTVAGVGLAVNLISFAILHGGNRENLNVRGALLHVLGDLLGSVAAIIAAVVIIVTGWTPIDPLLSVLVALLIARSAWMLVRQSTHVLLEGTPAEIDVPRLKAELVAAVPEVDDVHHVHVWTLASGKLVMTLHAHVRDGANGEQVLRTVLSVCRERFGVSHVTVQIEHGDCAD 272          
BLAST of mRNA_P-wetherbeei_contig6700.1.1 vs. uniprot
Match: A0A369T9F4_9PROT (Cation diffusion facilitator family transporter n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369T9F4_9PROT)

HSP 1 Score: 331 bits (848), Expect = 5.030e-110
Identity = 175/299 (58.53%), Postives = 215/299 (71.91%), Query Frame = 1
Query:   28 HHHHRHENKQDAVHDMTGRNERRVLQAMLLTAGFMAVEVAGGLWSGSLALLADAGHMLTDSAALALAWLAFRITRRPADMLRSYGYHRFQVLAAFVNSFIMLGLAAWIAVEAVQRIAEPVPILPWPVLGIAVVGLAVNLGSFALLHSGDRENLNMRGAALHVMGDILGSLAAIMAAIIIIYTGWMSADPILSLLSAGLILRGAWSIVRRSTHILLEGAPEDFDGVAVHDELLKALPDIKDVHHIHAWSLGDGNTLLTLHAAVQPGTDQSRLLAHIKAVLAERFGIRHATVQIETCACPD 924
            H HH H   +D+        +RRV  AMLLT  FM  EV GGL SGSLALLADAGHMLTD+A+L LAWLAFRI+RRPAD  RSYGYHRFQVLAAFVN   +L + A+I  EAV+R+ EPVP++   +L +A +GL VNL +F LLH GDRENLN+RGAALHVMGD+LGS+ AI+AA +I+ TGW   DPILSL+ AGLILR AW +VR+S HILLEG P   D + +   L   +P+++DVHH+HAWSL +   ++TLHA V    DQ  +L  IK VL +RF + HAT+QIE   C D
Sbjct:   13 HDHHHHAPPRDSD------GQRRVFLAMLLTGAFMVAEVVGGLISGSLALLADAGHMLTDTASLFLAWLAFRISRRPADPKRSYGYHRFQVLAAFVNGGTLLVIVAFIVFEAVRRLLEPVPVMGGTMLAVAALGLVVNLVAFRLLHGGDRENLNLRGAALHVMGDLLGSVGAIVAAGVIMATGWTPIDPILSLVVAGLILRSAWHLVRQSGHILLEGTPGHIDILRLKQHLRAEVPEVEDVHHVHAWSLTNERPMVTLHARVPEDADQQAVLQRIKTVLCKRFAVDHATIQIEAGPCAD 305          
BLAST of mRNA_P-wetherbeei_contig6700.1.1 vs. uniprot
Match: UPI001420B6CA (cation diffusion facilitator family transporter n=1 Tax=Parvibaculum indicum TaxID=562969 RepID=UPI001420B6CA)

HSP 1 Score: 331 bits (848), Expect = 6.150e-110
Identity = 172/282 (60.99%), Postives = 209/282 (74.11%), Query Frame = 1
Query:   79 GRNERRVLQAMLLTAGFMAVEVAGGLWSGSLALLADAGHMLTDSAALALAWLAFRITRRPADMLRSYGYHRFQVLAAFVNSFIMLGLAAWIAVEAVQRIAEPVPILPWPVLGIAVVGLAVNLGSFALLHSGDRENLNMRGAALHVMGDILGSLAAIMAAIIIIYTGWMSADPILSLLSAGLILRGAWSIVRRSTHILLEGAPEDFDGVAVHDELLKALPDIKDVHHIHAWSLGDGNTLLTLHAAVQPGTDQSRLLAHIKAVLAERFGIRHATVQIETCACPD 924
            G NERR+  AM +T GFM VE AGG  SGSLAL+ADAGHMLTD+ ALALAWLA R+ RRPAD  RS+GY R ++LAAF+N  +M+ LAAWI  EA  RI EPVPIL  P+L +A+VGL VN+ SF LLH G+  NLNMRGAALHV+GD+LGS+AAI+AAI+I+YTG+   DPILS+  A LILRGA+++ R + HIL+EG PE  D  A+ ++L   +P + DVHHIHAWSL  G  L+TLHA   PG   S  L  IK  LAER+G+ HATVQIE   CPD
Sbjct:   25 GANERRIAWAMWITGGFMIVEAAGGWISGSLALIADAGHMLTDTGALALAWLAVRLARRPADTARSFGYMRAEILAAFLNGAVMIALAAWIIAEAAMRIFEPVPILAGPMLVVAIVGLVVNIVSFTLLHGGE-GNLNMRGAALHVLGDLLGSVAAIVAAIVIMYTGFTPIDPILSVFVAVLILRGAFAVTRDAAHILMEGTPEGLDTDAMAEDLATGIPSVSDVHHIHAWSLASGRILVTLHAVPAPGAMPSEALTAIKERLAERYGVTHATVQIEPEDCPD 305          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6700.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TU37_9PROT3.120e-14172.32Cation transporter n=1 Tax=Alphaproteobacteria bac... [more]
A0A352KAI1_9PROT2.900e-11659.79Cation transporter n=6 Tax=Alphaproteobacteria bac... [more]
UPI001421E5843.950e-11561.43cation diffusion facilitator family transporter n=... [more]
UPI0019037A991.630e-11261.79cation diffusion facilitator family transporter n=... [more]
UPI0004ADC85C2.470e-11261.43cation diffusion facilitator family transporter n=... [more]
A0A843RGA7_9PROT5.470e-11161.79Cation diffusion facilitator family transporter n=... [more]
A0A7C5CNV1_9GAMM3.670e-11060.42Cation transporter n=1 Tax=Thiotrichales bacterium... [more]
A0A523K6L8_9GAMM4.270e-11060.29Cation diffusion facilitator family transporter n=... [more]
A0A369T9F4_9PROT5.030e-11058.53Cation diffusion facilitator family transporter n=... [more]
UPI001420B6CA6.150e-11060.99cation diffusion facilitator family transporter n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6700contigP-wetherbeei_contig6700:83..1012 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1089552.KI911559_gene1481
PFAMsCation_efflux
Model size930
Max annot lvl204441|Rhodospirillales
KEGG koko:K16264
KEGG TC2.A.4.1
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.04e-113
EggNOG OGsCOG1230@1|root,COG1230@2|Bacteria,1MVQB@1224|Proteobacteria,2TR65@28211|Alphaproteobacteria,2JRGG@204441|Rhodospirillales
DescriptionCation efflux family
Cds size930
COG categoryP
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186931.149542-CDS-P-wetherbeei_contig6700:82..10121683186931.149542-CDS-P-wetherbeei_contig6700:82..1012Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6700 83..1012 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6700.1.1prot_P-wetherbeei_contig6700.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6700 83..1012 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6700.1.1

>prot_P-wetherbeei_contig6700.1.1 ID=prot_P-wetherbeei_contig6700.1.1|Name=mRNA_P-wetherbeei_contig6700.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=310bp
MNSNQITKAHHHHRHENKQDAVHDMTGRNERRVLQAMLLTAGFMAVEVAG
GLWSGSLALLADAGHMLTDSAALALAWLAFRITRRPADMLRSYGYHRFQV
LAAFVNSFIMLGLAAWIAVEAVQRIAEPVPILPWPVLGIAVVGLAVNLGS
FALLHSGDRENLNMRGAALHVMGDILGSLAAIMAAIIIIYTGWMSADPIL
SLLSAGLILRGAWSIVRRSTHILLEGAPEDFDGVAVHDELLKALPDIKDV
HHIHAWSLGDGNTLLTLHAAVQPGTDQSRLLAHIKAVLAERFGIRHATVQ
IETCACPDR*
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mRNA from alignment at P-wetherbeei_contig6700:83..1012+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6700.1.1 ID=mRNA_P-wetherbeei_contig6700.1.1|Name=mRNA_P-wetherbeei_contig6700.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=930bp|location=Sequence derived from alignment at P-wetherbeei_contig6700:83..1012+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACAGTAACCAGATAACCAAAGCGCACCACCATCATCGCCATGAAAA CAAACAGGACGCCGTGCATGACATGACAGGGCGCAATGAACGGCGCGTAC TGCAGGCCATGCTGTTGACCGCCGGGTTTATGGCGGTAGAGGTGGCGGGC GGCCTGTGGTCCGGTTCACTGGCGCTGCTGGCGGATGCCGGGCATATGCT GACAGATAGTGCGGCGCTGGCGCTGGCGTGGCTGGCGTTCCGCATCACCC GGCGGCCGGCGGATATGTTGCGTTCATATGGCTATCACCGGTTTCAGGTG CTGGCGGCCTTCGTCAACAGTTTCATAATGCTGGGGCTGGCGGCATGGAT TGCGGTTGAGGCGGTTCAGCGCATCGCCGAGCCAGTGCCAATATTGCCCT GGCCGGTGCTGGGCATTGCGGTCGTGGGCCTGGCGGTTAATCTGGGCAGC TTTGCACTGCTGCATTCGGGCGATCGTGAAAATCTGAACATGCGCGGCGC GGCGCTGCATGTAATGGGGGACATTCTGGGGTCGCTGGCGGCCATCATGG CTGCGATCATAATCATATATACCGGATGGATGTCCGCCGACCCGATCCTG TCGCTGCTGAGCGCCGGACTGATTTTACGCGGCGCCTGGAGCATCGTGCG CCGTTCCACCCATATTCTGCTGGAGGGCGCGCCGGAGGATTTCGATGGCG TGGCCGTTCACGACGAATTGTTAAAAGCGCTGCCAGACATCAAGGACGTA CACCATATCCATGCCTGGTCGCTGGGCGACGGCAATACGCTGCTGACCCT GCACGCAGCGGTGCAGCCCGGCACAGACCAATCCCGGTTGCTTGCCCATA TCAAAGCCGTACTGGCGGAACGTTTCGGAATCCGTCACGCAACAGTGCAG ATTGAGACCTGCGCCTGCCCGGACCGGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6700:83..1012+

>mRNA_P-wetherbeei_contig6700.1.1 ID=mRNA_P-wetherbeei_contig6700.1.1|Name=mRNA_P-wetherbeei_contig6700.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=930bp|location=Sequence derived from alignment at P-wetherbeei_contig6700:83..1012+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACAGTAACCAGATAACCAAAGCGCACCACCATCATCGCCATGAAAA
CAAACAGGACGCCGTGCATGACATGACAGGGCGCAATGAACGGCGCGTAC
TGCAGGCCATGCTGTTGACCGCCGGGTTTATGGCGGTAGAGGTGGCGGGC
GGCCTGTGGTCCGGTTCACTGGCGCTGCTGGCGGATGCCGGGCATATGCT
GACAGATAGTGCGGCGCTGGCGCTGGCGTGGCTGGCGTTCCGCATCACCC
GGCGGCCGGCGGATATGTTGCGTTCATATGGCTATCACCGGTTTCAGGTG
CTGGCGGCCTTCGTCAACAGTTTCATAATGCTGGGGCTGGCGGCATGGAT
TGCGGTTGAGGCGGTTCAGCGCATCGCCGAGCCAGTGCCAATATTGCCCT
GGCCGGTGCTGGGCATTGCGGTCGTGGGCCTGGCGGTTAATCTGGGCAGC
TTTGCACTGCTGCATTCGGGCGATCGTGAAAATCTGAACATGCGCGGCGC
GGCGCTGCATGTAATGGGGGACATTCTGGGGTCGCTGGCGGCCATCATGG
CTGCGATCATAATCATATATACCGGATGGATGTCCGCCGACCCGATCCTG
TCGCTGCTGAGCGCCGGACTGATTTTACGCGGCGCCTGGAGCATCGTGCG
CCGTTCCACCCATATTCTGCTGGAGGGCGCGCCGGAGGATTTCGATGGCG
TGGCCGTTCACGACGAATTGTTAAAAGCGCTGCCAGACATCAAGGACGTA
CACCATATCCATGCCTGGTCGCTGGGCGACGGCAATACGCTGCTGACCCT
GCACGCAGCGGTGCAGCCCGGCACAGACCAATCCCGGTTGCTTGCCCATA
TCAAAGCCGTACTGGCGGAACGTTTCGGAATCCGTCACGCAACAGTGCAG
ATTGAGACCTGCGCCTGCCCGGACCGGTAA
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