mRNA_P-wetherbeei_contig670.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig670.1.2 vs. uniprot
Match: A0A835YY09_9STRA (Nucleoside phosphorylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY09_9STRA) HSP 1 Score: 266 bits (681), Expect = 1.080e-87 Identity = 128/188 (68.09%), Postives = 149/188 (79.26%), Query Frame = 1
Query: 46 MEAEAKPMIDHFDLKLDEARFPPTAPCKCYSGEHVGCKIHLIINGKCARFGVDNVGTVAAGLSAWLALEAFRPDLVINAGTAGGFRRKGAAIGDVFVSDGIMNHDRRIPIPGWTEWGLGDHKTVPTPALCKALGFKPGVVTTGNSLDHTPKDDEIMDSNNASVKDMEAAAVAWACEQHHNTPLFCLKV 609
MEAEA+P+IDH L+LDEA FP +APCKCY+ E G +H++ NGKC R GVD+VGTVA GL+AWL++E F+PDLVINAGTAGGF R GAAIGDVFVS +NHDRRI IPGWTEWG+G VPT L ALG+K GVVTT NSLD +D + M +N ASVKDME AAVAWACEQH+NTP FC+KV
Sbjct: 1 MEAEAQPLIDHLKLELDEAAFPASAPCKCYTSERNGYTMHVVTNGKCRRHGVDHVGTVAGGLAAWLSIEKFKPDLVINAGTAGGFNRMGAAIGDVFVSSRTVNHDRRIAIPGWTEWGVGKTDAVPTEQLRGALGYKHGVVTTSNSLDFIEEDAKHMLANEASVKDMEGAAVAWACEQHNNTPFFCIKV 188
BLAST of mRNA_P-wetherbeei_contig670.1.2 vs. uniprot
Match: A0A6H5JA26_9PHAE (PNP_UDP_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA26_9PHAE) HSP 1 Score: 265 bits (677), Expect = 9.810e-86 Identity = 125/197 (63.45%), Postives = 158/197 (80.20%), Query Frame = 1
Query: 19 VKKVVILVAMEAEAKPMIDHFDLKLDEARFPPTAPCKCYSGEHVGCKIHLIINGKCARFGVDNVGTVAAGLSAWLALEAFRPDLVINAGTAGGFRRKGAAIGDVFVSDGIMNHDRRIPIPGWTEWGLGDHKTVPTPALCKALGFKPGVVTTGNSLDHTPKDDEIMDSNNASVKDMEAAAVAWACEQHHNTPLFCLKV 609
+K VV++VAMEAEA P+I+ L D +FP AP KC+SG + G I+++ NGKC+RFGVD VGTVAAGLS WL++EA +PDLVINAGTAGGF++ AIGDVF+S + NHDRRIPIPG+ E+G+G+H++ PTP + K LGFK GVV+TG+S DHT DD++M+ N+A VKDMEAAAVAWACEQH TPLFC+KV
Sbjct: 89 IKNVVVIVAMEAEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQVGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVSTGSSFDHTKTDDKMMEENDARVKDMEAAAVAWACEQH-GTPLFCIKV 284
BLAST of mRNA_P-wetherbeei_contig670.1.2 vs. uniprot
Match: D8LCX1_ECTSI (PNP_UDP_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX1_ECTSI) HSP 1 Score: 249 bits (635), Expect = 1.660e-80 Identity = 117/191 (61.26%), Postives = 149/191 (78.01%), Query Frame = 1
Query: 37 LVAMEAEAKPMIDHFDLKLDEARFPPTAPCKCYSGEHVGCKIHLIINGKCARFGVDNVGTVAAGLSAWLALEAFRPDLVINAGTAGGFRRKGAAIGDVFVSDGIMNHDRRIPIPGWTEWGLGDHKTVPTPALCKALGFKPGVVTTGNSLDHTPKDDEIMDSNNASVKDMEAAAVAWACEQHHNTPLFCLKV 609
L+ AEA P+I+ L D +FP AP KC+SG + G I+++ NGKC+RFGVD +GTVAAGLS WL++EA +PD+VINAGTAGGF++ AIGDVF+S + NHDRRIPIPG+ E+G+G+H++ P P + K LGFK GVVTTG+S DHT DD++M+ N+A VKDMEAAAVAWACEQH TPLFC+KV
Sbjct: 13 LLRNTAEACPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDIVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPAPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQH-GTPLFCIKV 202
BLAST of mRNA_P-wetherbeei_contig670.1.2 vs. uniprot
Match: A0A087SFB9_AUXPR (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SFB9_AUXPR) HSP 1 Score: 219 bits (558), Expect = 1.630e-68 Identity = 109/199 (54.77%), Postives = 145/199 (72.86%), Query Frame = 1
Query: 13 KLVKKVVILVAMEAEAKPMIDHFDLKLDEAR-FPPTAPCKCYSGEHVGCKIHLIINGKCARFGVDNVGTVAAGLSAWLALEAFRPDLVINAGTAGGFRRKGAAIGDVFVSDGIMNHDRRIPIPGWTEWGLGDHKTVPTPALCKALGFKPGVVTTGNSLDHTPKDDEIMDSNNASVKDMEAAAVAWACEQHHNTPLFCLK 606
K +K++++L+AMEAEA P+I L D R P APC +SG H G +H+++NGKC + GVDNVGTV A L+A+LAL+AF PDLVI+ GTAGGF +GAAIGDVF+S +NHDRRIPIPG+ ++GLG H +PTP L ALG K G+V++GNSLD+ +D EIM ++ SVK+MEAAA+AW+ P+F +K
Sbjct: 35 KQIKRILVLIAMEAEAAPLIQALGLVQDTPRVIPEPAPCVSFSGSHAGAHVHVVVNGKCGKHGVDNVGTVPAALTAYLALQAFDPDLVISTGTAGGFGAQGAAIGDVFLSTATVNHDRRIPIPGFDQYGLGLHAALPTPQLQAALGLKAGLVSSGNSLDYVERDMEIMREHDTSVKEMEAAAIAWSASLF-GVPMFSVK 232
BLAST of mRNA_P-wetherbeei_contig670.1.2 vs. uniprot
Match: A0A1D1ZX64_AUXPR (PNP_UDP_1 domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZX64_AUXPR) HSP 1 Score: 219 bits (558), Expect = 2.090e-68 Identity = 109/199 (54.77%), Postives = 145/199 (72.86%), Query Frame = 1
Query: 13 KLVKKVVILVAMEAEAKPMIDHFDLKLDEAR-FPPTAPCKCYSGEHVGCKIHLIINGKCARFGVDNVGTVAAGLSAWLALEAFRPDLVINAGTAGGFRRKGAAIGDVFVSDGIMNHDRRIPIPGWTEWGLGDHKTVPTPALCKALGFKPGVVTTGNSLDHTPKDDEIMDSNNASVKDMEAAAVAWACEQHHNTPLFCLK 606
K +K++++L+AMEAEA P+I L D R P APC +SG H G +H+++NGKC + GVDNVGTV A L+A+LAL+AF PDLVI+ GTAGGF +GAAIGDVF+S +NHDRRIPIPG+ ++GLG H +PTP L ALG K G+V++GNSLD+ +D EIM ++ SVK+MEAAA+AW+ P+F +K
Sbjct: 35 KQIKRILVLIAMEAEAAPLIQALGLVQDTPRVIPEPAPCVSFSGSHAGAHVHVVVNGKCGKHGVDNVGTVPAALTAYLALQAFDPDLVISTGTAGGFGAQGAAIGDVFLSTATVNHDRRIPIPGFDQYGLGLHAALPTPQLQAALGLKAGLVSSGNSLDYVERDMEIMREHDTSVKEMEAAAIAWSASLF-GVPMFSVK 232
BLAST of mRNA_P-wetherbeei_contig670.1.2 vs. uniprot
Match: A0A7S2V4K5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4K5_9STRA) HSP 1 Score: 216 bits (551), Expect = 1.990e-67 Identity = 115/216 (53.24%), Postives = 143/216 (66.20%), Query Frame = 1
Query: 4 AEPKLVKKVVILVAMEAEAKPMIDHFDLKLDEARFPPT--------------APCKCYSGEHVGCKIHLIINGKCARFGVDNVGTVAAGLSAWLALEAFRPDLVINAGTAGGFRRKGAAIGDVFVSDGIMNHDRRIPIPGWTEWGLGDHKTVPTPALCKALGFKPGVVTTGNSLDHTPKDDEIMDSNNASVKDMEAAAVAWACEQHHNTPLFCLKV 609
A ++K V++ +AMEAEA P+++H L E + P Y GE CKI ++ NGK ++GVDNVGTV AGL +L+L A PD+VINAGT GGF KGA +GDVF+S NHDRRI IPG++EWG+GD+ VPTP L K LG+K GVVTTGNSLDH PKDDEIM +N+ASVKDME AA+A E + NTP F +KV
Sbjct: 13 ANRTVIKTVLVNIAMEAEAAPLVEHLGLTKCECNGDESNGDGGQSANILSGPMPAVVYEGEVNECKIFVVTNGKDPKYGVDNVGTVCAGLVTYLSLLAISPDIVINAGTCGGFISKGAQVGDVFISSAFKNHDRRIAIPGFSEWGIGDYAAVPTPNLVKELGYKTGVVTTGNSLDHVPKDDEIMAANDASVKDMEGAAIAAVAEMY-NTPCFGVKV 227
BLAST of mRNA_P-wetherbeei_contig670.1.2 vs. uniprot
Match: A0A835W7S0_CHLIN (PNP_UDP_1 domain-containing protein n=5 Tax=Chlamydomonas TaxID=3052 RepID=A0A835W7S0_CHLIN) HSP 1 Score: 209 bits (533), Expect = 4.310e-65 Identity = 107/198 (54.04%), Postives = 144/198 (72.73%), Query Frame = 1
Query: 16 LVKKVVILVAMEAEAKPMIDHFDLKLD-EARFPPTAPCKCYSGEHVGCKIHLIINGKCARFGVDNVGTVAAGLSAWLALEAFRPDLVINAGTAGGFRRKGAAIGDVFVSDGIMNHDRRIPIPGWTEWGLGDHKTVPTPALCKALGFKPGVVTTGNSLDHTPKDDEIMDSNNASVKDMEAAAVAWACEQHHNTPLFCLK 606
++K V+++ AMEAEA+P+I LK D A+ APC +SGEH G +H++ NGKC GVDNVGTV A LS +LA+ AF+PD+VI+AGT GGF+ +GAAIGDVF+ ++NHDRRIP+P + ++GLG + TP L ALG K GVV++GNSLD+T K EIM S+ A++K+MEAAA+AWAC + PL C+K
Sbjct: 1 MIKSVLLVFAMEAEAQPLIQALGLKEDVPAKIVGPAPCVTFSGEHEGLAVHVVWNGKCKDHGVDNVGTVPASLSTYLAVLAFKPDVVISAGTCGGFKAQGAAIGDVFLGTAVINHDRRIPLPAFDKYGLGHAALLATPHLQAALGLKSGVVSSGNSLDYTDKCMEIMTSHGAALKEMEAAAIAWACALY-KVPLMCVK 197
BLAST of mRNA_P-wetherbeei_contig670.1.2 vs. uniprot
Match: A0A2P6VBC2_9CHLO (Ribosome production factor 1 isoform B n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VBC2_9CHLO) HSP 1 Score: 226 bits (577), Expect = 5.520e-65 Identity = 113/199 (56.78%), Postives = 148/199 (74.37%), Query Frame = 1
Query: 13 KLVKKVVILVAMEAEAKPMIDHFDLKLDEA-RFPPTAPCKCYSGEHVGCKIHLIINGKCARFGVDNVGTVAAGLSAWLALEAFRPDLVINAGTAGGFRRKGAAIGDVFVSDGIMNHDRRIPIPGWTEWGLGDHKTVPTPALCKALGFKPGVVTTGNSLDHTPKDDEIMDSNNASVKDMEAAAVAWACEQHHNTPLFCLK 606
K +K +++LVAMEAEA PM++ L D R PP APC +SG+H G ++HL+ GKC GVDNVGTV A L+ +LA++AF+PD+VI+ GTAGGFR +GAAI DVFVS G++NHDRRIPIPG+ ++G+G +PTP L KALG K GVVT+GNSLD+T +D M + A+VK+MEAAAVAWA + P+FC+K
Sbjct: 1017 KTIKTILLLVAMEAEATPMVEALGLAADSPPRIPPPAPCHSFSGQHAGAEVHLVCFGKCKATGVDNVGTVPAALTTYLAIQAFKPDVVISTGTAGGFRSRGAAIADVFVSTGMVNHDRRIPIPGFDKYGVGAFDALPTPQLQKALGLKAGVVTSGNSLDYTAEDMARMVQHEAAVKEMEAAAVAWAADLF-GCPMFCIK 1214
BLAST of mRNA_P-wetherbeei_contig670.1.2 vs. uniprot
Match: A0A383W579_TETOB (PNP_UDP_1 domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383W579_TETOB) HSP 1 Score: 209 bits (533), Expect = 5.880e-65 Identity = 106/202 (52.48%), Postives = 143/202 (70.79%), Query Frame = 1
Query: 4 AEPKLVKKVVILVAMEAEAKPMIDHFDLKLDEA-RFPPTAPCKCYSGEHVGCKIHLIINGKCARFGVDNVGTVAAGLSAWLALEAFRPDLVINAGTAGGFRRKGAAIGDVFVSDGIMNHDRRIPIPGWTEWGLGDHKTVPTPALCKALGFKPGVVTTGNSLDHTPKDDEIMDSNNASVKDMEAAAVAWACEQHHNTPLFCLK 606
AE + +K VV ++AM+AEA P+I LK D R PP PC YSG H G +H++ +G VD +GTV A L+ +LA +AF PDL+I+AGTAGGF+ +GAAIGDVFVS G M+HDRRIP+PG+ + GLG ++ PTP L ALG K G+VT+GNSLD+T +D +IM+ + A+VK+MEAAA+AW + P+FC+K
Sbjct: 7 AEQQPIKSVVFIIAMQAEAAPLIAALGLKHDSPPRIPPPGPCVTYSGSHAGLDVHVVWSGHDNEHNVDLIGTVPASLATYLACQAFNPDLIISAGTAGGFKARGAAIGDVFVSTGKMHHDRRIPLPGFDKQGLGYVESTPTPQLRAALGLKAGIVTSGNSLDYTEQDMQIMNKHGAAVKEMEAAAIAWVAQMFRK-PMFCVK 207
BLAST of mRNA_P-wetherbeei_contig670.1.2 vs. uniprot
Match: A0A250X3R8_9CHLO (PNP_UDP_1 domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X3R8_9CHLO) HSP 1 Score: 208 bits (529), Expect = 2.030e-64 Identity = 107/197 (54.31%), Postives = 144/197 (73.10%), Query Frame = 1
Query: 19 VKKVVILVAMEAEAKPMIDHFDLKLDEARFPP-TAPCKCYSGEHVGCKIHLIINGKCARFGVDNVGTVAAGLSAWLALEAFRPDLVINAGTAGGFRRKGAAIGDVFVSDGIMNHDRRIPIPGWTEWGLGDHKTVPTPALCKALGFKPGVVTTGNSLDHTPKDDEIMDSNNASVKDMEAAAVAWACEQHHNTPLFCLK 606
+K+V++L AMEAEA P+I LK D+ + APC YSG ++H+ NGKCA VDNVGTV A L+A+L ++A PDLVI+AGTAGGF+ +GAAIGD FV ++NHDRRIPIPG+ ++G+G+ ++ PTP L ALGFK GV+++GNSLD+T K EIM S+ A+VK+MEAAA+AW C + + PL C+K
Sbjct: 7 IKRVLLLFAMEAEANPLISKLSLKKDDPQMVSGPAPCVTYSGIVGDLQVHVAWNGKCAVNSVDNVGTVPASLTAYLTIQALDPDLVISAGTAGGFKAQGAAIGDTFVGTSVVNHDRRIPIPGFDKYGIGELQSPPTPGLQTALGFKSGVISSGNSLDYTDKCLEIMGSHKAAVKEMEAAAIAWVCNLY-SKPLICVK 202 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig670.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig670.1.2 >prot_P-wetherbeei_contig670.1.2 ID=prot_P-wetherbeei_contig670.1.2|Name=mRNA_P-wetherbeei_contig670.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=203bp MAEPKLVKKVVILVAMEAEAKPMIDHFDLKLDEARFPPTAPCKCYSGEHVback to top mRNA from alignment at P-wetherbeei_contig670:139..1167- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig670.1.2 ID=mRNA_P-wetherbeei_contig670.1.2|Name=mRNA_P-wetherbeei_contig670.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1029bp|location=Sequence derived from alignment at P-wetherbeei_contig670:139..1167- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig670:139..1167- >mRNA_P-wetherbeei_contig670.1.2 ID=mRNA_P-wetherbeei_contig670.1.2|Name=mRNA_P-wetherbeei_contig670.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=609bp|location=Sequence derived from alignment at P-wetherbeei_contig670:139..1167- (Phaeothamnion wetherbeei SAG_119_79)back to top |