mRNA_P-wetherbeei_contig67.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig67.3.1
Unique NamemRNA_P-wetherbeei_contig67.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: UPI001884F512 (membrane-bound transcription factor site-2 protease-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884F512)

HSP 1 Score: 103 bits (257), Expect = 8.850e-20
Identity = 128/493 (25.96%), Postives = 185/493 (37.53%), Query Frame = 1
Query:    4 LDRLGLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNA-WAAVLSTAGGQGGSGF----------VVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHV-EDLLRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYD-GLFYATGHGVVITGVQPWSPLADAINPGAVVVRANGMHVGNALDLAAAIESAVRPATNEVFEHGASTITAAPEELWLSRGFCMDAGEATLLAERDDH-------GDNCCDSILHGGGYAEAGGRRCFVAWPQRSADNGANDVAVVPLGAATDAGAGYGRLASGMDNQAAVCLPAHGVAATSRAHCDSSNVCGRDGVCWRPLGEFDEVLLTVQLGDRRIVLFEGQPRTMLSALRTSDAQLRGAAAAPAMLRWGALAAETARDFWWLLLQASASLAIANAVPCALLDGGAICHQVLRLG 1422
            L+  G+   P  + W TR+LN      GS     R  R  +A G  +       S++ L++ +    W A  +                    V+P V +P    P +   ++V    HE+GHA+AAV   +RV+  G+ +  I P  FV V  + L    P  +L V  AGVWHN++LC V  L     AAP      Y    G+++  V+P SPL  A           G+  G   DL   ++        +     A    A P       G+C+ +       E  DH       G   C +  +G  +       CF    Q  AD    D    P                        CLPA  V   +   C ++  C  +  C +P  E    LL ++    R VLF G P       R S  + R A  + ++     L  ET   +   +L  SA+LA+ NAVPC  LDG  I   +L  G
Sbjct:   36 LESSGISIKPLQIKWSTRMLNRSFQRWGSA--PGRLTRLWFACGVWITCALLLPSMLLLIYTIYRLLWPAAPAAXXXXXXXXXATRPAFILEPVLPGVNLPADDVPYYLVTLLVCSVCHEIGHAVAAVREHVRVFGSGLLLVLIVPAAFVDVCSESLAALPPGRRLRVLCAGVWHNVVLCAVAALVLA--AAPLALAPLYFVNDGIIVYHVEPGSPLHGA----------TGLSAG---DLVTGVDDCAVTTRRDWLSCLARQAAAPPA------GYCVPSDITATYDETIDHPFQREETGTMECCAASNGSSHL------CF----QFIADESRPDRGAPPFS----------------------CLPARAVVDAAPMRCATTAACAEEHFCLQPALENGTRLLALRRRGARAVLFLGVPAAAFRDTRVSGYRPRSALFSASL----PLRLETLARY---VLSFSAALAVLNAVPCRALDGQWIWEALLEAG 466          
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: A0A3Q2Y7E3_HIPCM (Membrane-bound transcription factor site-2 protease n=6 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2Y7E3_HIPCM)

HSP 1 Score: 99.8 bits (247), Expect = 1.920e-18
Identity = 73/208 (35.10%), Postives = 107/208 (51.44%), Query Frame = 1
Query:    4 LDRLGLRWGPFHVAWETRLLN------ARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
            L R GL   PFHV W+T + N      AR+H         RAL   +++G V       ASVV L+  L    A + +     G Q     VVP V +P +    F+ A++++  +HE+GHA+AA+   +RV   G+FV  ++PG FV +    L   SP  QL ++ AGVWHN +LCV+  LA       +   FY++G G ++T V
Sbjct:   38 LARRGLMLSPFHVRWQTTIFNRLFAYCARIHP--------RALYLWFSSGLVFGVVAMLASVVLLVKTLQQTLAQMTTDNPRIGAQQALQVVVPGVNLPTSHLAYFFLALLLSGVIHELGHAVAALREQVRVNGFGMFVFVVYPGAFVDLFTTHLNIVSPAQQLRIFCAGVWHNFMLCVLA-LAFLFLLPLFLLPFYSSGAGALVTEV 236          
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: UPI00147229EE (membrane-bound transcription factor site-2 protease-like isoform X2 n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI00147229EE)

HSP 1 Score: 99.0 bits (245), Expect = 2.230e-18
Identity = 72/198 (36.36%), Postives = 107/198 (54.04%), Query Frame = 1
Query:   16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
            GL   PFHV W+T + N RL A  ++ +   AL   + +G V       ASVV L+  L    A + +     GGQ     VVP V +P ++   F+ A++++  +HE+GHA+AA+   +RV   G+FV  ++PG FV +    L   SPT QL ++ AGVWHN +LC+   LA       +   FY+TG G ++T V
Sbjct:   42 GLMLAPFHVRWQTTMFN-RLFAYCARIKPG-ALYLWFNSGLVFGVVAMLASVVLLMKTLQQTLAQMTTDNPRIGGQQALQVVVPGVNLPVSQLGYFFIALLLSGVIHELGHAVAALREQVRVNGFGMFVFVVYPGAFVDLFTTHLNLISPTQQLRIFCAGVWHNFILCLAA-LAILFLLPVFLFPFYSTGAGALVTEV 236          
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: A0A672GPL1_SALFA (Membrane-bound transcription factor site-2 protease n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672GPL1_SALFA)

HSP 1 Score: 99.4 bits (246), Expect = 2.660e-18
Identity = 72/198 (36.36%), Postives = 108/198 (54.55%), Query Frame = 1
Query:   16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
            GL   PFHV W+T + N RL A  + R + RAL   +++G V        SV+ L+  L   +A + +     GGQ     VVP   +P ++   F+ A++++  VHE+GHA+AA+   +RV   G+FV  ++PG FV +    L   SPT QL ++ AGVWHN +LC+V  LA       +    Y+TG G ++T V
Sbjct:   40 GLMLSPFHVRWQTTMFN-RLFAYCA-RINPRALYLWFSSGLVFGVAAMLGSVLLLIRTLQQTYAQMTTDNPRIGGQQALQVVVPGFNLPTSQLAYFFIALLLSGLVHELGHAVAALREQVRVNGFGMFVFVVYPGAFVDLFTTHLNLISPTQQLRIFCAGVWHNFILCLVA-LAFLFLLPVFLFPAYSTGGGALVTEV 234          
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: A0A1A8UEQ6_NOTFU (Membrane-bound transcription factor site-2 protease n=20 Tax=Percomorphaceae TaxID=1489872 RepID=A0A1A8UEQ6_NOTFU)

HSP 1 Score: 98.6 bits (244), Expect = 4.780e-18
Identity = 74/198 (37.37%), Postives = 107/198 (54.04%), Query Frame = 1
Query:   16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
            GL   PFHV W+T + N RL A  + R + RAL   + +G V        SVV L+  L   +A + ++    GGQ     VVP V +P ++   F+ A++++  +HE+GHA+AA+   +RV   G+FV  ++PG FV +    L   SPT QL ++ AGVWHNL+LCV   LA            Y TG G ++T V
Sbjct:   42 GLMVSPFHVRWQTTMFN-RLFAYCA-RINPRALYLWFNSGLVFGVAAMVGSVVLLIKTLQQTYAQMTTSNPRIGGQQVLQVVVPGVNLPTSQLAYFFIALLLSGVIHELGHAVAALREQVRVNGFGMFVFVLYPGAFVDLFTTHLNLVSPTQQLRIFCAGVWHNLVLCVAA-LAFLFLLPVLLFPAYTTGAGALVTEV 236          
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: A0A0S7LKY0_9TELE (Membrane-bound transcription factor site-2 protease (Fragment) n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LKY0_9TELE)

HSP 1 Score: 94.7 bits (234), Expect = 5.110e-18
Identity = 64/169 (37.87%), Postives = 95/169 (56.21%), Query Frame = 1
Query:   16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCV 510
            GL   PFHV W+T + N RL A  + R + RAL   +++G V        SVV L+  L   +A + +     GGQ     VVP V +P ++   F+ A++++  +HE+GHA+AA+   +RV   G+FV  ++PG FV +    L   SP  QL ++ AGVWHN +LCV
Sbjct:   71 GLMLSPFHVRWQTTMFN-RLFAYCA-RINARALYLWFSSGLVFGVAAMLGSVVLLVKTLQQTYAQMTTDNPRIGGQQTLQVVVPGVNLPTSQLAYFFIALLLSGVIHELGHAVAALRESVRVNGFGMFVFVVYPGAFVDLFTTHLNLISPAQQLRIFCAGVWHNFVLCV 237          
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: A0A087XD04_POEFO (Membrane bound transcription factor peptidase, site 2 n=1 Tax=Poecilia formosa TaxID=48698 RepID=A0A087XD04_POEFO)

HSP 1 Score: 99.8 bits (247), Expect = 5.920e-18
Identity = 74/198 (37.37%), Postives = 107/198 (54.04%), Query Frame = 1
Query:   16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
            GL   PFHV W+T + N RL A  + R + RAL   +++G V        SVV L+  L   +A + +     GGQ     VVP V +P ++   F+ A++++  +HE+GHA+AA+   +RV   G+FV  ++PG FV +    L   SP  QL ++ AGVWHN +LCVV  LA            YATG G ++T V
Sbjct:   42 GLMLSPFHVRWQTTMFN-RLFAYCA-RINPRALYLWFSSGLVFGVAAMLGSVVLLVKTLQQTYAQMTTDNPRIGGQQTLQVVVPGVNLPTSQLAYFFIALLLSGVIHELGHAVAALRESVRVNGFGMFVFVVYPGAFVDLFTTHLNLISPAQQLRIFCAGVWHNFVLCVVA-LALLFLLPVLLFPVYATGVGAMVTEV 236          
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: M3ZN92_XIPMA (Membrane-bound transcription factor site-2 protease n=6 Tax=Poeciliinae TaxID=586240 RepID=M3ZN92_XIPMA)

HSP 1 Score: 98.2 bits (243), Expect = 6.290e-18
Identity = 73/198 (36.87%), Postives = 106/198 (53.54%), Query Frame = 1
Query:   16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
            GL   PFHV W+T + N RL A  + R + RAL   +++G V        SVV L+  L   +A + +     GGQ     VVP V +P ++   F+ A++++  +HE+GHA+AA+   +RV   G+FV  ++PG FV +    L   SP  QL ++ AGVWHN +LCV   LA            YATG G ++T V
Sbjct:   42 GLMLSPFHVRWQTTMFN-RLFAYCA-RINPRALYLWFSSGLVFGVAAMLGSVVLLVKTLQQTYAQMTTDNPRIGGQQTLQVVVPGVNLPTSQLAYFFIALLLSGIIHELGHAVAALRESVRVNGFGMFVFVVYPGAFVDLFTTHLNLISPAQQLRIFCAGVWHNFVLCVAA-LALLFLLPVLLFPVYATGVGAMVTEV 236          
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: UPI0011C15126 (membrane-bound transcription factor site-2 protease-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C15126)

HSP 1 Score: 93.6 bits (231), Expect = 8.310e-18
Identity = 72/198 (36.36%), Postives = 105/198 (53.03%), Query Frame = 1
Query:   16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
            GL   PFH+ W+T + N RL A  + R + RAL   + +G V        SVV L+  L    A + +     GGQ     VVP V +P ++   F++A++++  +HE+GHA+AA+   +RV   G+FV  ++PG FV +    L   SPT QL ++ AGVWHN +LCV   LA            Y TG G ++T V
Sbjct:   42 GLMLSPFHLRWQTTMFN-RLFAYCA-RINPRALYLWFNSGLVFGIVAMLGSVVLLVKTLQQTLAQMTTDNPRMGGQQTLQVVVPGVNLPTSQLVYFFSALLLSGVIHELGHAVAALREQVRVNGFGMFVFVVYPGAFVDLFTTHLNLISPTQQLRIFCAGVWHNFVLCVAA-LAFLFLLPILLFPVYYTGAGALVTEV 236          
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: A0A3B3ZM65_9GOBI (Membrane-bound transcription factor site-2 protease n=2 Tax=Oxudercinae TaxID=497678 RepID=A0A3B3ZM65_9GOBI)

HSP 1 Score: 97.4 bits (241), Expect = 1.130e-17
Identity = 71/202 (35.15%), Postives = 105/202 (51.98%), Query Frame = 1
Query:   16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGVQPWS 609
            GL   PFHV W+T + N RL A  ++ R R AL   + +G V    +   SV+ L+  L    A + +     GGQ     VVP V +P  +   F+ A++++  +HE+GHA+AA+   +RV   G+F+  ++PG FV +    L   SPT QL ++ AGVWHN +LCV   L        +    Y TG G ++T V   S
Sbjct:   42 GLMLSPFHVRWQTTMFN-RLFAYCARIRPR-ALYLWFNSGLVFGVVSMVGSVILLVKTLQQTVAQMTTDNPRIGGQQTLQVVVPGVNLPTNQLAYFFIALLLSGVIHELGHAVAALREQVRVNGFGMFIFVVYPGAFVDLFTTHLNLISPTQQLRIFCAGVWHNFMLCVAA-LTFLFLLPVFLFPMYTTGAGALVTDVMQGS 240          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001884F5128.850e-2025.96membrane-bound transcription factor site-2 proteas... [more]
A0A3Q2Y7E3_HIPCM1.920e-1835.10Membrane-bound transcription factor site-2 proteas... [more]
UPI00147229EE2.230e-1836.36membrane-bound transcription factor site-2 proteas... [more]
A0A672GPL1_SALFA2.660e-1836.36Membrane-bound transcription factor site-2 proteas... [more]
A0A1A8UEQ6_NOTFU4.780e-1837.37Membrane-bound transcription factor site-2 proteas... [more]
A0A0S7LKY0_9TELE5.110e-1837.87Membrane-bound transcription factor site-2 proteas... [more]
A0A087XD04_POEFO5.920e-1837.37Membrane bound transcription factor peptidase, sit... [more]
M3ZN92_XIPMA6.290e-1836.87Membrane-bound transcription factor site-2 proteas... [more]
UPI0011C151268.310e-1836.36membrane-bound transcription factor site-2 proteas... [more]
A0A3B3ZM65_9GOBI1.130e-1735.15Membrane-bound transcription factor site-2 proteas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig67contigP-wetherbeei_contig67:6777..8870 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog157072.XP_008863948.1
Preferred nameMBTPS2
PFAMsPeptidase_M50
Model size1902
Max annot lvl2759|Eukaryota
KEGG koko:K07765,ko:K09201
KEGG Pathwayko04141,map04141
Hectar predicted targeting categorysignal anchor
GOsGO:0000139,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0006066,GO:0006355,GO:0006357,GO:0006508,GO:0006629,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0006984,GO:0006986,GO:0006991,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008233,GO:0008237,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0012505,GO:0016020,GO:0016021,GO:0016125,GO:0016485,GO:0016787,GO:0019216,GO:0019218,GO:0019219,GO:0019222,GO:0019538,GO:0023051,GO:0023052,GO:0030968,GO:0031090,GO:0031224,GO:0031293,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031984,GO:0032933,GO:0033554,GO:0033619,GO:0034620,GO:0034976,GO:0035103,GO:0035966,GO:0035967,GO:0036003,GO:0036500,GO:0042175,GO:0042221,GO:0042538,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043618,GO:0043620,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045540,GO:0045893,GO:0045935,GO:0045944,GO:0046890,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051090,GO:0051091,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051604,GO:0051716,GO:0060255,GO:0062012,GO:0065007,GO:0065009,GO:0070011,GO:0070887,GO:0071214,GO:0071310,GO:0071470,GO:0071472,GO:0071474,GO:0071475,GO:0071501,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090181,GO:0098588,GO:0098791,GO:0098827,GO:0104004,GO:0106118,GO:0140096,GO:1900457,GO:1901360,GO:1901564,GO:1901615,GO:1902652,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:1905897,GO:1990440,GO:2000112,GO:2001141
Exons2
Evalue8.67e-21
EggNOG OGsCOG0750@1|root,KOG2921@2759|Eukaryota
EC3.4.24.85
DescriptionATF6-mediated unfolded protein response
Cds size1629
COG categoryM
BRITEko00000,ko00001,ko01000,ko01002,ko03000,ko03029,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186930.8616755-UTR-P-wetherbeei_contig67:6776..70481683186930.8616755-UTR-P-wetherbeei_contig67:6776..7048Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig67 6777..7048 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186930.873561-CDS-P-wetherbeei_contig67:7048..81941683186930.873561-CDS-P-wetherbeei_contig67:7048..8194Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig67 7049..8194 -
1683186930.884222-CDS-P-wetherbeei_contig67:8387..88701683186930.884222-CDS-P-wetherbeei_contig67:8387..8870Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig67 8388..8870 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig67.3.1prot_P-wetherbeei_contig67.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig67 7049..8870 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig67.3.1

>prot_P-wetherbeei_contig67.3.1 ID=prot_P-wetherbeei_contig67.3.1|Name=mRNA_P-wetherbeei_contig67.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=543bp
ALDRLGLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVT
FTSAASVVFLLHNLSNAWAAVLSTAGGQGGSGFVVPPVAVPPARAPCFWA
AVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDLLRFSS
PTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGVQ
PWSPLADAINPGAVVVRANGMHVGNALDLAAAIESAVRPATNEVFEHGAS
TITAAPEELWLSRGFCMDAGEATLLAERDDHGDNCCDSILHGGGYAEAGG
RRCFVAWPQRSADNGANDVAVVPLGAATDAGAGYGRLASGMDNQAAVCLP
AHGVAATSRAHCDSSNVCGRDGVCWRPLGEFDEVLLTVQLGDRRIVLFEG
QPRTMLSALRTSDAQLRGAAAAPAMLRWGALAAETARDFWWLLLQASASL
AIANAVPCALLDGGAICHQVLRLGRQGGSRGGGGEGDGELGIAWGDDDNG
SSCRYALCSDRVASAVVWLGTALLASNVLACLIVGGGAGIGL*
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mRNA from alignment at P-wetherbeei_contig67:6777..8870-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig67.3.1 ID=mRNA_P-wetherbeei_contig67.3.1|Name=mRNA_P-wetherbeei_contig67.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2094bp|location=Sequence derived from alignment at P-wetherbeei_contig67:6777..8870- (Phaeothamnion wetherbeei SAG_119_79)
GCGCTTGATCGCCTCGGCCTTCGATGGGGCCCGTTTCATGTGGCCTGGGA GACGCGCTTGCTGAATGCCAGACTTCACGCGCTGGGGAGCAAAAGGCGCA GCAGGCGCGCCTTGCGCTCCCTCTACGCGGCTGGTGCGGTGGTAGTGACC TTCACGAGCGCGGCGTCGGTTGTATTTCTGCTACACAACCTAAGTAATGC GTGGGCTGCCGTATTATCCACGGCAGGCGGACAAGGCGGCAGCGGCTTCG TAGTTCCTCCCGTCGCCGTACCGCCGGCAAGGGCCCCGTGCTTTTGGGCT GCCGTCATAGTAGCCTTTTCAGTCCATGAGGTTGGCCATGCGCTTGCCGC CGTGGCCAATGGGCTACGTGTCTACTCTGTCGGCGTCTTCGTGACTGCAA TCTTCCCGGGCACGTTCGTTCATGTAGAGGATCTCCTTCGCTTCAGCTCC CCAACCGTGCAACTGCACGTCTATGCTGCCGGGGTGAGCGCGGGAATAGA TTTCACAAGAGCGCGTAGTTTTAGGGATTCCGTTTTGGTGACTGATTCGT TGAAGGGACTGAGCCACGCCACAGTCCGTCACGGACTATTTGATTTTCAT ACAGTAGAAGAAACGGTGCTTCGCTTATTTCCTCATCTCCGGTCGTTCTT TAATCCCCTTCCCTTCAACCCTGCAGGTTTGGCATAACCTGCTTCTATGC GTCGTTTGCTGGTTGGCGGAGCGCCATTGGGCGGCGCCTTACGATGGCCT CTTTTACGCTACCGGGCACGGCGTTGTCATCACGGGCGTGCAACCATGGT CGCCGCTTGCGGACGCCATCAACCCCGGCGCCGTTGTGGTTCGCGCAAAC GGCATGCATGTCGGCAACGCTCTGGATCTAGCCGCAGCAATTGAATCAGC CGTCCGTCCCGCAACGAATGAAGTCTTTGAACATGGCGCTTCAACCATAA CTGCGGCGCCGGAAGAGCTGTGGCTAAGCAGAGGGTTCTGCATGGACGCA GGCGAGGCGACGCTTCTTGCGGAAAGAGACGATCACGGCGATAACTGCTG CGATAGCATTCTTCACGGCGGCGGCTACGCCGAGGCCGGGGGCCGCCGCT GCTTCGTCGCGTGGCCGCAGCGTAGCGCAGATAACGGCGCTAACGACGTT GCTGTTGTTCCTCTTGGAGCGGCGACCGATGCTGGCGCCGGTTATGGTCG TCTGGCGTCCGGAATGGACAACCAAGCGGCGGTCTGCCTTCCTGCGCACG GCGTCGCGGCGACTTCGAGGGCCCATTGCGACAGCAGCAACGTCTGCGGA CGTGACGGCGTTTGCTGGCGGCCGCTCGGGGAATTTGATGAGGTGCTCCT GACCGTGCAGCTCGGTGACCGCCGCATCGTCCTCTTCGAAGGGCAGCCGC GCACGATGCTCTCGGCTCTGCGGACCTCCGACGCCCAGCTGCGCGGCGCC GCGGCGGCGCCGGCGATGCTCCGATGGGGCGCCCTGGCGGCGGAGACTGC ACGCGATTTCTGGTGGCTGCTGCTCCAGGCGTCGGCCTCCCTCGCCATCG CCAACGCCGTACCATGCGCCTTGCTGGATGGCGGCGCCATCTGTCATCAA GTGCTTCGGCTGGGCCGGCAGGGCGGCAGCCGGGGCGGCGGCGGCGAAGG CGATGGCGAGCTCGGGATAGCGTGGGGGGACGATGACAATGGCAGCAGTT GCCGATATGCCTTATGCAGCGACCGCGTGGCATCGGCGGTAGTGTGGCTC GGGACAGCGCTGCTTGCTTCCAACGTGTTGGCTTGTCTCATTGTGGGTGG CGGCGCAGGAATTGGGTTATGAAGAGGCGGCAGCCAGGCCACCGCCATCG GCAGAGCGAGCTGCCCTCCGCAAGCCCCGCCGGCAAAAGAAGCGGCGCGC GGAGGCGCACTGAGAGATGCAGGAGCCTGTTGGGCGCGCCTTTACGAGGT GGAGATGGCGAGGAGGCAGGGCCCTGACCAAAATTTCAAATTGAGACCTG TGTCGGCTCGGAATCGGGTCCACTCTCATAAGGGAAAGGTGGGATAAGGT GCGTTAAAGGCAGTTATCAATATGTCGTAGCGCTTGCAGTGTCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig67:6777..8870-

>mRNA_P-wetherbeei_contig67.3.1 ID=mRNA_P-wetherbeei_contig67.3.1|Name=mRNA_P-wetherbeei_contig67.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1629bp|location=Sequence derived from alignment at P-wetherbeei_contig67:6777..8870- (Phaeothamnion wetherbeei SAG_119_79)
GCGCTTGATCGCCTCGGCCTTCGATGGGGCCCGTTTCATGTGGCCTGGGA
GACGCGCTTGCTGAATGCCAGACTTCACGCGCTGGGGAGCAAAAGGCGCA
GCAGGCGCGCCTTGCGCTCCCTCTACGCGGCTGGTGCGGTGGTAGTGACC
TTCACGAGCGCGGCGTCGGTTGTATTTCTGCTACACAACCTAAGTAATGC
GTGGGCTGCCGTATTATCCACGGCAGGCGGACAAGGCGGCAGCGGCTTCG
TAGTTCCTCCCGTCGCCGTACCGCCGGCAAGGGCCCCGTGCTTTTGGGCT
GCCGTCATAGTAGCCTTTTCAGTCCATGAGGTTGGCCATGCGCTTGCCGC
CGTGGCCAATGGGCTACGTGTCTACTCTGTCGGCGTCTTCGTGACTGCAA
TCTTCCCGGGCACGTTCGTTCATGTAGAGGATCTCCTTCGCTTCAGCTCC
CCAACCGTGCAACTGCACGTCTATGCTGCCGGGGTTTGGCATAACCTGCT
TCTATGCGTCGTTTGCTGGTTGGCGGAGCGCCATTGGGCGGCGCCTTACG
ATGGCCTCTTTTACGCTACCGGGCACGGCGTTGTCATCACGGGCGTGCAA
CCATGGTCGCCGCTTGCGGACGCCATCAACCCCGGCGCCGTTGTGGTTCG
CGCAAACGGCATGCATGTCGGCAACGCTCTGGATCTAGCCGCAGCAATTG
AATCAGCCGTCCGTCCCGCAACGAATGAAGTCTTTGAACATGGCGCTTCA
ACCATAACTGCGGCGCCGGAAGAGCTGTGGCTAAGCAGAGGGTTCTGCAT
GGACGCAGGCGAGGCGACGCTTCTTGCGGAAAGAGACGATCACGGCGATA
ACTGCTGCGATAGCATTCTTCACGGCGGCGGCTACGCCGAGGCCGGGGGC
CGCCGCTGCTTCGTCGCGTGGCCGCAGCGTAGCGCAGATAACGGCGCTAA
CGACGTTGCTGTTGTTCCTCTTGGAGCGGCGACCGATGCTGGCGCCGGTT
ATGGTCGTCTGGCGTCCGGAATGGACAACCAAGCGGCGGTCTGCCTTCCT
GCGCACGGCGTCGCGGCGACTTCGAGGGCCCATTGCGACAGCAGCAACGT
CTGCGGACGTGACGGCGTTTGCTGGCGGCCGCTCGGGGAATTTGATGAGG
TGCTCCTGACCGTGCAGCTCGGTGACCGCCGCATCGTCCTCTTCGAAGGG
CAGCCGCGCACGATGCTCTCGGCTCTGCGGACCTCCGACGCCCAGCTGCG
CGGCGCCGCGGCGGCGCCGGCGATGCTCCGATGGGGCGCCCTGGCGGCGG
AGACTGCACGCGATTTCTGGTGGCTGCTGCTCCAGGCGTCGGCCTCCCTC
GCCATCGCCAACGCCGTACCATGCGCCTTGCTGGATGGCGGCGCCATCTG
TCATCAAGTGCTTCGGCTGGGCCGGCAGGGCGGCAGCCGGGGCGGCGGCG
GCGAAGGCGATGGCGAGCTCGGGATAGCGTGGGGGGACGATGACAATGGC
AGCAGTTGCCGATATGCCTTATGCAGCGACCGCGTGGCATCGGCGGTAGT
GTGGCTCGGGACAGCGCTGCTTGCTTCCAACGTGTTGGCTTGTCTCATTG
TGGGTGGCGGCGCAGGAATTGGGTTATGA
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