mRNA_P-wetherbeei_contig6693.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6693.3.1 vs. uniprot
Match: A0A835YU05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU05_9STRA) HSP 1 Score: 102 bits (254), Expect = 8.650e-23 Identity = 48/124 (38.71%), Postives = 67/124 (54.03%), Query Frame = 1
Query: 10 RWARFVVFGL-LDGSANHVWYHAIAGTITGSSILTVLTKMAVDSTFYTPTYCFLFLSLMTFAEGGRLGEITDRLRRDFKQMVVSTWGIWVPSNAIIYGMVPLEQQVLASCVVAFCYTIALSLWE 378
RWA +FG +DG+ H+WY + I G + L K D+ Y+P YC LFL EG L +R + M+ +T W+P+N +IYG VPLE +VLASC + YT LS+W+
Sbjct: 2010 RWANRALFGACVDGALGHLWYAQLDALIAGDTALAAAAKTLADAALYSPAYCLLFLGGTALLEGAGLRATAAHVRGGYSAMLAATVAAWLPANVLIYGAVPLEYRVLASCAMLVAYTFGLSVWD 2133
BLAST of mRNA_P-wetherbeei_contig6693.3.1 vs. uniprot
Match: A0A7S3BXR9_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BXR9_9VIRI) HSP 1 Score: 57.8 bits (138), Expect = 2.980e-8 Identity = 30/93 (32.26%), Postives = 46/93 (49.46%), Query Frame = 1
Query: 124 MAVDSTFYTPTYCFLFLSLMTFAEGG--------RLGEITDRLRRDFKQMVVSTWGIWVPSNAIIYGMVPLEQQVLASCVVAFCYTIALSLWE 378
+ D +TP +C FL M G G R++ D+ ++ W+P NA+IYG+VPL+++VLA V YT+ LS W+
Sbjct: 1 VVADFVCFTPLWCAAFLFCMEAMRSGFRQTTIGFGAGLAAARVKADWLELYTGNVAAWLPINALIYGVVPLQRRVLAFSVATLLYTLVLSAWD 93
BLAST of mRNA_P-wetherbeei_contig6693.3.1 vs. uniprot
Match: UPI000625830F (protein Mpv17 isoform X1 n=3 Tax=Orussus abietinus TaxID=222816 RepID=UPI000625830F) HSP 1 Score: 58.2 bits (139), Expect = 7.430e-8 Identity = 32/113 (28.32%), Postives = 55/113 (48.67%), Query Frame = 1
Query: 10 RWARFVVFGL-LDGSANHVWYHAIAGTITGSSILTVLTKMAVDSTFYTPTYCFLFLSLMTFAEGGRLGEITDRLRRDFKQMVVSTWGIWVPSNAIIYGMVPLEQQVLASCVVA 345
R A+F G L G A WY + I +L K+ D F+ P + L+ + F G L + ++LR ++K ++++ + +W + + +VPLE QVL +VA
Sbjct: 59 RTAQFGGLGFFLMGPAIRTWYGILDKRIGSKGKTVILKKVVCDQLFFAPALIAVLLNSIGFLRGNNLEQNKEKLRNEYKDILINNYKLWPMVQIVNFSLVPLEYQVLVVQIVA 171
BLAST of mRNA_P-wetherbeei_contig6693.3.1 vs. uniprot
Match: M2X182_GALSU (Peroxisomal membrane MPV17/PMP22-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X182_GALSU) HSP 1 Score: 55.8 bits (133), Expect = 5.250e-7 Identity = 32/122 (26.23%), Postives = 60/122 (49.18%), Query Frame = 1
Query: 7 ERWARFVVFGLLD-GSANHVWYHAIAGTITGSSILTVLTKMAVDSTFYTPTYCFLFLSLMTFAEGGRLGEITDRLRRDFKQMVVSTWGIWVPSNAIIYGMVPLEQQVLASCVVAFCYTIALS 369
+R RF FGLL G H WY + ++ ++++K+ VD T +TP S ++ EG + ++++DF + + W +W+P+ I + P + +VL VA + + L+
Sbjct: 44 QRTLRFTSFGLLIFGPCAHYWYRLLDHWFPKATTRSLISKVLVDQTLFTPVAIVSVFSYVSLLEGHPFVAV-QKVKQDFWTTLKANWALWLPAQTINFRFTPPDYRVLFVNSVALIWNVYLA 164
BLAST of mRNA_P-wetherbeei_contig6693.3.1 vs. uniprot
Match: A0A6A6HBQ1_9PEZI (Uncharacterized protein n=1 Tax=Viridothelium virens TaxID=1048519 RepID=A0A6A6HBQ1_9PEZI) HSP 1 Score: 55.8 bits (133), Expect = 5.320e-7 Identity = 39/124 (31.45%), Postives = 62/124 (50.00%), Query Frame = 1
Query: 10 RWARFVVFG-LLDGSANHVWYHAIAGTITGSSI--LTVLTKMAVDSTFYTPTYCFLFLSLMTFAEGGRLGEITDRLRRDFKQMVVSTWGIWVPSNAIIYGMVPLEQQVLASCVVAFCYTIALSL 372
R AR ++G + G A +WY + I + L +L ++ D + PT +FLS MTF EGG +G +LR + +V W +W + + +VPL+ +VL VV+ + LSL
Sbjct: 48 RTARMTLYGGAIFGPAATLWYSFLQRRIHFPTRPNLQILAQVGCDQCIFAPTNAAVFLSSMTFLEGGDVGA---KLRSTWGTVVAMNWVVWPWVQGVNFKLVPLQHRVLVVNVVSLGWNCYLSL 168
BLAST of mRNA_P-wetherbeei_contig6693.3.1 vs. uniprot
Match: UPI000854DD9D (protein Mpv17 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854DD9D) HSP 1 Score: 54.3 bits (129), Expect = 6.040e-7 Identity = 29/105 (27.62%), Postives = 52/105 (49.52%), Query Frame = 1
Query: 64 WYHAIAGTITGSSILTVLTKMAVDSTFYTPTYCFLFLSLMTFAEGGRLGEITDRLRRDFKQMVVSTWGIWVPSNAIIYGMVPLEQQVLASCVVAFCYTIALSLWE 378
WY + G + GSS L KM +D ++P + FL+++ G EI ++L+RD+K +++ + IW + +PL ++ VA + LS W+
Sbjct: 7 WYKVLEGLVPGSSKSVALKKMLLDQVGFSPCFLGCFLTIVGSLNGLSKAEIWEKLKRDYKDALITNYYIWPAVQIANFYFIPLYHRLAVVQCVAIIWNAYLS-WK 110
BLAST of mRNA_P-wetherbeei_contig6693.3.1 vs. uniprot
Match: A0A1X6P0N1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0N1_PORUM) HSP 1 Score: 55.5 bits (132), Expect = 1.840e-6 Identity = 29/111 (26.13%), Postives = 52/111 (46.85%), Query Frame = 1
Query: 37 LLDGSANHVWYHAIAGTITGSSILTVLTKMAVDSTFYTPTYCFLFLSLMTFAEGGRLGEITDRLRRDFKQMVVSTWGIWVPSNAIIYGMVPLEQQVLASCVVAFCYTIALS 369
+ G H WY + G V + + D + + P ++L EGG + ++T ++R F + + +WVP+ A+ +G+VPL +V VA +T+ LS
Sbjct: 200 VFTGPMLHGWYETLGRVFPGGGWAAVASSVVADQSLFAPLVNGVYLMATGLMEGGGVDDVTAKVRGGFGDVWRKSIAVWVPAQAVNFGLVPLVWRVPYVNGVALLWTVLLS 310
BLAST of mRNA_P-wetherbeei_contig6693.3.1 vs. uniprot
Match: A0A8J6JRM7_ELECQ (Uncharacterized protein n=2 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6JRM7_ELECQ) HSP 1 Score: 54.7 bits (130), Expect = 1.980e-6 Identity = 30/105 (28.57%), Postives = 53/105 (50.48%), Query Frame = 1
Query: 64 WYHAIAGTITGSSILTVLTKMAVDSTFYTPTYCFLFLSLMTFAEGGRLGEITDRLRRDFKQMVVSTWGIWVPSNAIIYGMVPLEQQVLASCVVAFCYTIALSLWE 378
WY + G ++GSS + KM +D + P + FL+++ G EI D+L+RD+K +++ + IW + +PL ++ VVA + LS W+
Sbjct: 105 WYKVLDGLVSGSSKSVAVKKMLLDQGGFAPCFLGGFLTIVGSLNGLSKEEIWDKLKRDYKDALITNYYIWPAVQIANFYFIPLHHRLAVVQVVAIIWNCYLS-WK 208
BLAST of mRNA_P-wetherbeei_contig6693.3.1 vs. uniprot
Match: A0A6A6JNL3_9PLEO (Uncharacterized protein n=1 Tax=Westerdykella ornata TaxID=318751 RepID=A0A6A6JNL3_9PLEO) HSP 1 Score: 52.8 bits (125), Expect = 6.160e-6 Identity = 39/117 (33.33%), Postives = 59/117 (50.43%), Query Frame = 1
Query: 34 GLLDGSANHVWYHAIAGTITGSSI-LTVLTKMAVDSTFYTPTYCFLFLSLMTFAEGGRLGEITDRLRRDFKQMVVSTWGIWVPSNAIIYGMVPLEQQVLA-SCVVAFCYTIALSLWE 378
GL+ G A WY + IT SS ++ ++A D + P LFLS M++ EGG + ++LRR + V+ +W A+ + +VPLE +VL +CV AL WE
Sbjct: 58 GLIFGPAATHWYRILNSRITLSSAPRSIAARIAADQFVFAPVNLALFLSSMSYLEGG---DPKEKLRRAWLPGYVNNCLLWPWVQAVNFSVVPLEHRVLVVNCV-------ALGEWE 164
BLAST of mRNA_P-wetherbeei_contig6693.3.1 vs. uniprot
Match: UPI001B7DF3A1 (protein Mpv17 isoform X1 n=2 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7DF3A1) HSP 1 Score: 52.0 bits (123), Expect = 1.330e-5 Identity = 35/122 (28.69%), Postives = 56/122 (45.90%), Query Frame = 1
Query: 7 ERWARFVVFGLLD-GSANHVWYHAIAGTITGSSILTVLTKMAVDSTFYTPTYCFLFLSLMTFAEGGRLGEITDRLRRDFKQMVVSTWGIWVPSNAIIYGMVPLEQQVLASCVVAFCYTIALS 369
+R R + GL+ G VWY + I G S L KM +D P + FL++ F G E+ +L++D+K +VS + IW + + VPL ++ +VA + LS
Sbjct: 50 KRTIRMTIVGLIYVGPVLGVWYKFLDQIIIGKSKTVALKKMLLDQFALAPCFLACFLAVAGFLGGHSREEVWLKLKKDYKDTLVSNYFIWPAVQVLNFYFVPLVYRLPLIQIVALMWNTYLS 171 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6693.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6693.3.1 >prot_P-wetherbeei_contig6693.3.1 ID=prot_P-wetherbeei_contig6693.3.1|Name=mRNA_P-wetherbeei_contig6693.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp QPERWARFVVFGLLDGSANHVWYHAIAGTITGSSILTVLTKMAVDSTFYTback to top mRNA from alignment at P-wetherbeei_contig6693:2554..3284- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6693.3.1 ID=mRNA_P-wetherbeei_contig6693.3.1|Name=mRNA_P-wetherbeei_contig6693.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=731bp|location=Sequence derived from alignment at P-wetherbeei_contig6693:2554..3284- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6693:2554..3284- >mRNA_P-wetherbeei_contig6693.3.1 ID=mRNA_P-wetherbeei_contig6693.3.1|Name=mRNA_P-wetherbeei_contig6693.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig6693:2554..3284- (Phaeothamnion wetherbeei SAG_119_79)back to top |