mRNA_P-wetherbeei_contig6690.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6690.1.1 vs. uniprot
Match: A0A6B0USQ1_IXORI (Uncharacterized protein ycf68 (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=A0A6B0USQ1_IXORI) HSP 1 Score: 203 bits (517), Expect = 6.830e-65 Identity = 101/112 (90.18%), Postives = 102/112 (91.07%), Query Frame = 1
Query: 1 GGAWLSSARVVRCWVKSRNERNPRSMLPACPFGGGGDS*ETAGVNSEEGGDDVKSSCPLCPGLHACYNGRYKGLRCCKAERIPKSRSQFGLGSATRPHEVGVASNRRSATLR 336
GGAWLSSARVVRCWVKSRNERNPRSMLPA GGGDS ETAGVNSEEGGDDVKSSCPLC GLHACYNGRY GLR C+ E IPKSRSQFGLGSATRPHEVGVASNRRSATLR
Sbjct: 30 GGAWLSSARVVRCWVKSRNERNPRSMLPAR---GGGDSWETAGVNSEEGGDDVKSSCPLCLGLHACYNGRYNGLRYCEVELIPKSRSQFGLGSATRPHEVGVASNRRSATLR 138
BLAST of mRNA_P-wetherbeei_contig6690.1.1 vs. uniprot
Match: A0A0J8BFL5_BETVV (Uncharacterized protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8BFL5_BETVV) HSP 1 Score: 177 bits (450), Expect = 3.980e-55 Identity = 86/99 (86.87%), Postives = 88/99 (88.89%), Query Frame = 2
Query: 152 MTSSHHAPYVQGFTHATMAGTKGCDAVRRSESQKAGLSSDWGLQLDPMKSESLVIADQQRCGEYVPGPCTHRPSRHESRQHPKPVAQPLWREPSKVGLA 448
MTSSHHAPYVQGFTHATMAGT CD VR SES+KAGLSSDWGLQLDPMKSESLVIADQQRCGEYVPGPCTHRPSRHESRQHPKPVAQP E + G A
Sbjct: 1 MTSSHHAPYVQGFTHATMAGTDRCDPVRGSESEKAGLSSDWGLQLDPMKSESLVIADQQRCGEYVPGPCTHRPSRHESRQHPKPVAQPPCGEGAVEGGA 99
BLAST of mRNA_P-wetherbeei_contig6690.1.1 vs. uniprot
Match: D9VQ25_9ACTN (Uncharacterized protein n=8 Tax=Streptomyces TaxID=1883 RepID=D9VQ25_9ACTN) HSP 1 Score: 172 bits (435), Expect = 5.100e-53 Identity = 83/95 (87.37%), Postives = 84/95 (88.42%), Query Frame = 2
Query: 104 VGTHRRLPGSTRRKVGMTSSHHAPYVQGFTHATMAGTKGCDAVRRSESQKAGLSSDWGLQLDPMKSESLVIADQQRCGEYVPGPCTHRPSRHESR 388
+GTHRR PGSTRRKVG TSSHHAPYV G T ATMAGT CD VR SESQKAGLSSDWGLQLDPMKSESLVIADQ CGEYVPGPCTHRPSRHESR
Sbjct: 1 MGTHRRPPGSTRRKVGTTSSHHAPYVLGCTRATMAGTMSCDTVRWSESQKAGLSSDWGLQLDPMKSESLVIADQHCCGEYVPGPCTHRPSRHESR 95
BLAST of mRNA_P-wetherbeei_contig6690.1.1 vs. uniprot
Match: D6X5E0_STRE2 (Uncharacterized protein n=1 Tax=Streptomyces pristinaespiralis (strain ATCC 25486 / DSM 40338 / CBS 914.69 / JCM 4507 / NBRC 13074 / NRRL 2958 / 5647) TaxID=457429 RepID=D6X5E0_STRE2) HSP 1 Score: 171 bits (433), Expect = 2.320e-52 Identity = 93/123 (75.61%), Postives = 96/123 (78.05%), Query Frame = 2
Query: 104 VGTHRRLPGSTRRKVGMTSSHHAPYVQGFTHATMAGTKGCDAVRRSESQKAGLSSDWGLQLDPMKSESLVIADQQRCGEYVPGPCTHRPSRHESRQHPKPVA---QPLWREPSKVGLAIGTKS 463
+GTHRRLPGSTRRKVG TSSHHAPYV G T ATMAGTK C+AVRRSESQKAGLSSDWGLQLDPMKSE LVIADQ CGEYVPGP P SR+ P A P RE SKVGLAIGTKS
Sbjct: 1 MGTHRRLPGSTRRKVGTTSSHHAPYVLGCTRATMAGTKSCEAVRRSESQKAGLSSDWGLQLDPMKSELLVIADQHCCGEYVPGPLYTPPV--TSRKSVTPEAGGPTPCGRELSKVGLAIGTKS 121
BLAST of mRNA_P-wetherbeei_contig6690.1.1 vs. uniprot
Match: A0A255PXY7_9ACTN (Uncharacterized protein n=2 Tax=Streptomyces sp. FBKL.4005 TaxID=2015515 RepID=A0A255PXY7_9ACTN) HSP 1 Score: 170 bits (430), Expect = 2.940e-52 Identity = 82/95 (86.32%), Postives = 83/95 (87.37%), Query Frame = 2
Query: 104 VGTHRRLPGSTRRKVGMTSSHHAPYVQGFTHATMAGTKGCDAVRRSESQKAGLSSDWGLQLDPMKSESLVIADQQRCGEYVPGPCTHRPSRHESR 388
+GTH R PGSTRRKVG TSSHHAPYV G T ATMAGTK CD R SESQKAGLSSDWGLQLDPMKSESLVIADQ CGEYVPGPCTHRPSRHESR
Sbjct: 1 MGTHGRPPGSTRRKVGTTSSHHAPYVLGCTRATMAGTKSCDTARWSESQKAGLSSDWGLQLDPMKSESLVIADQHCCGEYVPGPCTHRPSRHESR 95
BLAST of mRNA_P-wetherbeei_contig6690.1.1 vs. uniprot
Match: A4EB57_COLAA (Uncharacterized protein n=1 Tax=Collinsella aerofaciens (strain ATCC 25986 / DSM 3979 / JCM 10188 / KCTC 3647 / NCTC 11838 / VPI 1003) TaxID=411903 RepID=A4EB57_COLAA) HSP 1 Score: 169 bits (429), Expect = 3.360e-51 Identity = 82/109 (75.23%), Postives = 91/109 (83.49%), Query Frame = 1
Query: 1 GGAWLSSARVVRCWVKSRNERNPRSMLPACPFGGGGDS*ETAGVNSEEGGDDVKSSCPLCPGLHACYNGRYKGLRCCKAERIPKSRSQFGLGSATRPHEVGVASNRRSA 327
GGAWLSSARVVRCWVKSRNERNPR +LP+ G G+ TA V +EEGGDDVKSSCPLCPGLH CYNGRY+G+ + ERIP+SR QFGLG+ATRPHEVGVASNR SA
Sbjct: 16 GGAWLSSARVVRCWVKSRNERNPRRVLPS---GDAGNPRGTAAVKAEEGGDDVKSSCPLCPGLHTCYNGRYRGMPPREGERIPESRPQFGLGAATRPHEVGVASNRGSA 121
BLAST of mRNA_P-wetherbeei_contig6690.1.1 vs. uniprot
Match: D9UQ14_STRS3 (Uncharacterized protein n=2 Tax=Streptomyces TaxID=1883 RepID=D9UQ14_STRS3) HSP 1 Score: 167 bits (423), Expect = 7.710e-51 Identity = 90/123 (73.17%), Postives = 92/123 (74.80%), Query Frame = 2
Query: 104 VGTHRRLPGSTRRKVGMTSSHHAPYVQGFTHATMAGTKGCDAVRRSESQKAGLSSDWGLQLDPMKSESLVIADQQRCGEYVPGPCTHRPSRHESRQHPKPVA---QPLWREPSKVGLAIGTKS 463
+GTH R PGSTRRKVG TSSHHAPYV G T ATMAGT CD R SESQKAGLSSDWGLQLDPMKSE LVIADQ CGEYVPGPCTH P SR+ P A P RE SKVG AIGTKS
Sbjct: 1 MGTHGRPPGSTRRKVGTTSSHHAPYVLGCTRATMAGTMSCDTARWSESQKAGLSSDWGLQLDPMKSELLVIADQHCCGEYVPGPCTHLP--FSSRKSVTPEAGGPTPCGRELSKVGPAIGTKS 121
BLAST of mRNA_P-wetherbeei_contig6690.1.1 vs. uniprot
Match: D5ZTV8_STRV1 (Uncharacterized protein (Fragment) n=1 Tax=Streptomyces viridosporus (strain ATCC 14672 / DSM 40746 / JCM 4963 / KCTC 9882 / NRRL B-12104 / FH 1290) TaxID=566461 RepID=D5ZTV8_STRV1) HSP 1 Score: 165 bits (417), Expect = 9.860e-50 Identity = 92/136 (67.65%), Postives = 98/136 (72.06%), Query Frame = 1
Query: 82 PACPFGGGGDS*ETAGVNSEEGGDDVKSSCPLCPGLHACYNGRYKGLRCCKAERIPKSRSQFGLGSATRPHEVGVASNRRSATLR*IRS------RALYTPPVTSRKSATPEAGGPTLVEGAVEGGAGDWDEVVTR 471
P PFGG GDS ETAGVNSEEGGDDVKSSCPLC GLH CYNGRY LR + ERI KSRSQFGLGSATRPHEVGVASNRRSA LR + + A + V + +S P G EGAVEGG GDWDEVVTR
Sbjct: 4 PTGPFGGAGDSRETAGVNSEEGGDDVKSSCPLCLGLHTCYNGRYNELRYREVERISKSRSQFGLGSATRPHEVGVASNRRSALLR-VNTFPGPVHTARHVTKVGNTRSRWPNPPG----EGAVEGGTGDWDEVVTR 134
BLAST of mRNA_P-wetherbeei_contig6690.1.1 vs. uniprot
Match: A7B8Q3_9ACTO (Uncharacterized protein n=1 Tax=Schaalia odontolytica ATCC 17982 TaxID=411466 RepID=A7B8Q3_9ACTO) HSP 1 Score: 162 bits (410), Expect = 2.720e-49 Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 2
Query: 122 LPGSTRRKVGMTSSHHAPYVQGFTHATMAGTKGCDAVRRSESQKAGLSSDWGLQLDPMKSESLVIADQQRCGEYVPGPCTHRPSRHES 385
+PG TRRKVGMTS+HHAPYV GFTHATMAGT+GCD VR SES KA LSSDWGLQLDPMK ESLVIADQQRCGEYV GPCTHRPSRHES
Sbjct: 1 MPGLTRRKVGMTSNHHAPYVLGFTHATMAGTEGCDTVRWSESLKASLSSDWGLQLDPMKVESLVIADQQRCGEYVLGPCTHRPSRHES 88
BLAST of mRNA_P-wetherbeei_contig6690.1.1 vs. uniprot
Match: A0A2I1P569_GARVA (Uncharacterized protein n=1 Tax=Gardnerella vaginalis TaxID=2702 RepID=A0A2I1P569_GARVA) HSP 1 Score: 157 bits (396), Expect = 5.630e-47 Identity = 79/101 (78.22%), Postives = 82/101 (81.19%), Query Frame = 2
Query: 107 GTHRRLPGSTRRKVGMTSSHHAPYVQGFTHATMAGTKGCDAVRRSESQKAGLSSDWGLQLDPMKSESLVIADQQRCGEYVPGPCTHRPSRHESRQHPKPVA 409
GTH PG TRRKVGMTS HHAPYVQGFTHATMAGT GCD V S S K GLSSD LQLD +K+ESLVIA+QQR GE VPGPCTHRPS HES QHPKPVA
Sbjct: 3 GTHGGPPGLTRRKVGMTSDHHAPYVQGFTHATMAGTTGCDMVTWSGSLKTGLSSDRSLQLDYVKAESLVIANQQRRGECVPGPCTHRPSSHESGQHPKPVA 103 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6690.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6690.1.1 >prot_P-wetherbeei_contig6690.1.1 ID=prot_P-wetherbeei_contig6690.1.1|Name=mRNA_P-wetherbeei_contig6690.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=105bp MTSSHHAPYVQGFTHATMAGTKGCDAVRRSESQKAGLSSDWGLQLDPMKSback to top mRNA from alignment at P-wetherbeei_contig6690:20..490+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6690.1.1 ID=mRNA_P-wetherbeei_contig6690.1.1|Name=mRNA_P-wetherbeei_contig6690.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig6690:20..490+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6690:20..490+ >mRNA_P-wetherbeei_contig6690.1.1 ID=mRNA_P-wetherbeei_contig6690.1.1|Name=mRNA_P-wetherbeei_contig6690.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig6690:20..490+ (Phaeothamnion wetherbeei SAG_119_79)back to top |