mRNA_P-wetherbeei_contig6686.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6686.1.1 vs. uniprot
Match: A0A6H5KNH6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH6_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 6.680e-12 Identity = 48/118 (40.68%), Postives = 66/118 (55.93%), Query Frame = 1
Query: 1 WVDNFVRQRSQKSKLLSAEGRSADKVAIGETITKLRTMMLAGYDVQHIYNVDGTGRAH-LQAAAAPDEPLAERGPADGASTKGTKAKDSLSASLCTNTSGTHMLPLSVIGLAKNPRCF 351
WV N V + + S +L E S D A E + +R + Y V++I+NVD TG + L +R A G TKG KAKD +SA +CTN +GT +P+++IG AKNPRCF
Sbjct: 229 WVRNLVNRHNLTSFVLHGEAGSLDAEAAAEGMAAIRRAC-SKYKVENIFNVDETGMYYRLLPKRTYLSTTEKRKTARG--TKGMKAKDRVSAYMCTNATGTAKVPMAIIGRAKNPRCF 343
BLAST of mRNA_P-wetherbeei_contig6686.1.1 vs. uniprot
Match: A0A085NBW6_9BILA (HTH CENPB-type domain-containing protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085NBW6_9BILA) HSP 1 Score: 59.7 bits (143), Expect = 5.090e-8 Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 1 WVDNFVRQRSQKSKLLSAEGRSADKVAIGETITKLRTMM-LAGYDVQHIYNVDGTGRAHLQAAAAPDEPLAERGPADGASTKGTKAKDSLSASLCTNTSGTHMLPLSVIGLAKNPRCF 351
W+ F ++ + + E SAD+ + +L+ + GYD + IYN D TG LQ A P LA R A+ A+T +K+ ++ +C N+SGTH +PL +IG +K P+CF
Sbjct: 123 WLHKFKKRHGMREIEIHGE-MSADESSASTFKDELKRYLDQEGYDEEFIYNADETG---LQWKALPKRSLASR--AEDATTGCKPSKERVTVLICANSSGTHRIPLLLIGKSKKPKCF 234
BLAST of mRNA_P-wetherbeei_contig6686.1.1 vs. uniprot
Match: A0A6H5JML3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML3_9PHAE) HSP 1 Score: 59.3 bits (142), Expect = 7.230e-8 Identity = 43/120 (35.83%), Postives = 61/120 (50.83%), Query Frame = 1
Query: 1 WVDNFVRQRSQKSKLLSAEGRSADKVAIGETITKLRTMMLAGYDVQHIYNVDGTGRAHLQAAAAPDEPLAERGPADGASTKGTKA---KDSLSASLCTNTSGTHMLPLSVIGLAKNPRCF 351
W NFV++ +S E S DK AI E + ++R + Y + I+NVD TG LQ P D + +G+K+ KD LSA +C N GT + +++IG AK PRCF
Sbjct: 191 WAKNFVKRNKIQSMRFHGEAGSVDKEAIKEGLEEIRDLC-EKYPARFIFNVDETG---LQWKLMPRRTYLSTS-YDRKTARGSKSMHFKDRLSAIMCCNADGTAKVDMTIIGRAKEPRCF 305
BLAST of mRNA_P-wetherbeei_contig6686.1.1 vs. uniprot
Match: UPI001CA8F7C7 (jerky protein homolog-like n=1 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CA8F7C7) HSP 1 Score: 59.3 bits (142), Expect = 7.240e-8 Identity = 46/124 (37.10%), Postives = 61/124 (49.19%), Query Frame = 1
Query: 1 WVDNF-----VRQRSQKSKLLSAEGRSADK--VAIGETITKLRTMMLAGYDVQHIYNVDGTGRAHLQAAAAPDEPLAERGPADGASTKGTKAKDSLSASLCTNTSGTHMLPLSVIGLAKNPRCF 351
W++ F +RQ + + LSA +A+K + IG I + GY IYN D +G L + P + LA R K +KD ++ C N SGTH LPL VIG AKNPRCF
Sbjct: 132 WLEKFKNRHGIRQLQIQGEALSANSDAAEKFKLTIGNYIEE------GGYSRDDIYNADESG---LNWRSLPRKSLASRQETSACGFK--VSKDRVTIMTCANASGTHKLPLLVIGKAKNPRCF 244
BLAST of mRNA_P-wetherbeei_contig6686.1.1 vs. uniprot
Match: A0A085M3S5_9BILA (DDE-1 domain-containing protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085M3S5_9BILA) HSP 1 Score: 57.4 bits (137), Expect = 2.270e-7 Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 1
Query: 1 WVDNFVRQRSQKSKLLSAEGRSADKVAIGETITKLRTMM-LAGYDVQHIYNVDGTGRAHLQAAAAPDEPLAERGPADGASTKGTKA-KDSLSASLCTNTSGTHMLPLSVIGLAKNPRCF 351
W+DNF + +S + E SAD+ + +L+ + GYD +YN D TG L A P + L R + G KA K+ ++ LC N++G+H LPL +IG AK PR F
Sbjct: 9 WLDNFNKHHGIRSHDICGEKLSADEASADSFREELKKPLDEEGYDPDFVYNADETG---LNWKALPSQSLVARHEEN---VPGYKARKERVTVMLCANSTGSHRLPLFLIGKAKKPRSF 121
BLAST of mRNA_P-wetherbeei_contig6686.1.1 vs. uniprot
Match: UPI00158AFF78 (tigger transposable element-derived protein 4-like n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158AFF78) HSP 1 Score: 57.8 bits (138), Expect = 2.500e-7 Identity = 40/118 (33.90%), Postives = 60/118 (50.85%), Query Frame = 1
Query: 1 WVDNFVRQRSQKSKLLSAEGRSADKVAIGETITKLRTMM-LAGYDVQHIYNVDGTGRAHLQAAAAPDEPLAERGPADGASTKGTKAKDSLSASLCTNTSGTHMLPLSVIGLAKNPRCF 351
WVD F ++ + + E SAD A L+++ ++G + IYN D TG L P LA + ++ K K + ++ +C+N SGTH LPL VIG +K+PRCF
Sbjct: 187 WVDKFKKRHGIRCISMHGEKLSADTTAAEVFKKNLQSITSISGLPLDKIYNCDETG---LFLKIMPKRTLASKSEKSASNRKLAKTRSTIM--MCSNASGTHKLPLFVIGKSKSPRCF 299
BLAST of mRNA_P-wetherbeei_contig6686.1.1 vs. uniprot
Match: A0A085MSE9_9BILA (DDE-1 domain-containing protein n=2 Tax=Trichuris suis TaxID=68888 RepID=A0A085MSE9_9BILA) HSP 1 Score: 57.4 bits (137), Expect = 3.250e-7 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 124 GYDVQHIYNVDGTGRAHLQAAAAPDEPLAERGPADGASTKGTKAKDSLSASLCTNTSGTHMLPLSVIGLAKNPRCF 351
GYD + IYN D TG LQ A P LA R A+ A+T +K+ ++ +C N+SGTH +PL +IG +K P+CF
Sbjct: 23 GYDEEFIYNADETG---LQWKALPKRSLASR--AEDATTGCKPSKERVTVLICANSSGTHRIPLLLIGKSKKPKCF 93
BLAST of mRNA_P-wetherbeei_contig6686.1.1 vs. uniprot
Match: A0A085MV17_9BILA (HTH CENPB-type domain-containing protein n=2 Tax=Trichuris suis TaxID=68888 RepID=A0A085MV17_9BILA) HSP 1 Score: 57.4 bits (137), Expect = 3.450e-7 Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 1
Query: 1 WVDNFVRQRSQKSKLLSAEGRSADKVAIGETITKLRTMM-LAGYDVQHIYNVDGTGRAHLQAAAAPDEPLAERGPADGASTKGTKA-KDSLSASLCTNTSGTHMLPLSVIGLAKNPRCF 351
W+DNF + +S + E SAD+ + +L+ + GYD +YN D TG L A P + L R + G KA K+ ++ LC N++G+H LPL +IG AK PR F
Sbjct: 429 WLDNFNKHHGIRSHDICGEKLSADEASADSFREELKKPLDEEGYDPDFVYNADETG---LNWKALPSQSLVARHEEN---VPGYKARKERVTVMLCANSTGSHRLPLFLIGKAKKPRSF 541
BLAST of mRNA_P-wetherbeei_contig6686.1.1 vs. uniprot
Match: A0A5S6QSY9_TRIMR (DDE-1 domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QSY9_TRIMR) HSP 1 Score: 55.8 bits (133), Expect = 1.080e-6 Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 46 LSAEGRSADKVAIGETITKLRTMM-LAGYDVQHIYNVDGTGRAHLQAAAAPDEPLAERGPADGASTKGTKAKDSLSASLCTNTSGTHMLPLSVIGLAKNPRCF 351
+ E S+D+ + + KL+ + GYD IYN D TG L+ P LA R A+ AS G KA ++ +C N+SGTH +PL VIG +K P+CF
Sbjct: 1 MHGEKMSSDESSASKFKDKLKRYLDEEGYDEDFIYNADETG---LKWKTLPKRTLASR--AEDASA-GCKASKGVTVMICANSSGTHSIPLLVIGKSKKPKCF 97
BLAST of mRNA_P-wetherbeei_contig6686.1.1 vs. uniprot
Match: A0A6H5JLL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL8_9PHAE) HSP 1 Score: 54.3 bits (129), Expect = 4.120e-6 Identity = 41/120 (34.17%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 1 WVDNFVRQRSQKSKLLSAEGRSADKVAIGETITKLRTMMLAGYDVQHIYNVDGTGRAHLQAAAAPDEPLAERGPADGASTKGTKA---KDSLSASLCTNTSGTHMLPLSVIGLAKNPRCF 351
W +F+ + + +SK + S D AI + + KLR + +A YD ++I N D T LQ +P G D ++ +G K K+ ++ + + SG LPLS+IG AKNPRCF
Sbjct: 180 WAKHFISRHNLRSKSQHGQAGSVDDEAIADELRKLREV-IAKYDPENIINCDETA---LQYRMSPRRSYTTPGE-DKSTVRGVKGMSFKERITLYVAADASG-RKLPLSIIGHAKNPRCF 293 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6686.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6686.1.1 >prot_P-wetherbeei_contig6686.1.1 ID=prot_P-wetherbeei_contig6686.1.1|Name=mRNA_P-wetherbeei_contig6686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=117bp WVDNFVRQRSQKSKLLSAEGRSADKVAIGETITKLRTMMLAGYDVQHIYNback to top mRNA from alignment at P-wetherbeei_contig6686:93..443- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6686.1.1 ID=mRNA_P-wetherbeei_contig6686.1.1|Name=mRNA_P-wetherbeei_contig6686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig6686:93..443- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6686:93..443- >mRNA_P-wetherbeei_contig6686.1.1 ID=mRNA_P-wetherbeei_contig6686.1.1|Name=mRNA_P-wetherbeei_contig6686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig6686:93..443- (Phaeothamnion wetherbeei SAG_119_79)back to top |