mRNA_P-wetherbeei_contig6681.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6681.1.1 vs. uniprot
Match: A0A835ZBC9_9STRA (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBC9_9STRA) HSP 1 Score: 199 bits (507), Expect = 4.100e-56 Identity = 93/136 (68.38%), Postives = 112/136 (82.35%), Query Frame = 3
Query: 891 RCNPISESDLATYMVNCIGDPAKTNKILDLGGPDDGYTMEEQGKLLAVACGKEAKIVKAPVALFDAIIGGLDFLGQFAAPMADAAELARIGKYYAVEDMLTTEPDQKFGKTTLKQHYEKIARDGQEYDPYTSMFGK 1298
+CNPI+E DLA YMV+ + DP + NK+L+LGGPD+GYTM +QG+LLA ACG + I+KAPV LFDAIIGGLDF G F DAAELARIGKYYAVEDMLTT+P +KFG TLK+HYE+IAR+G +YDPYT+MF K
Sbjct: 189 KCNPIAEVDLARYMVDSMRDPERDNKVLNLGGPDEGYTMAQQGELLAEACGVKPNIMKAPVGLFDAIIGGLDFFGNFLPSFEDAAELARIGKYYAVEDMLTTQPSEKFGTITLKEHYERIAREGNDYDPYTTMFAK 324
BLAST of mRNA_P-wetherbeei_contig6681.1.1 vs. uniprot
Match: A0A7S3Y013_HETAK (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y013_HETAK) HSP 1 Score: 182 bits (461), Expect = 8.650e-49 Identity = 88/134 (65.67%), Postives = 110/134 (82.09%), Query Frame = 3
Query: 891 RCNPISESDLATYMVNCIGDPAKTNKILDLGGPDDGYTMEEQGKLLAVACGKE-AKIVKAPVALFDAIIGGLDFLGQFAAPMADAAELARIGKYYAVEDMLTTEPDQKFGKTTLKQHYEKIARDGQEYDPYTSM 1289
+CNPI+ESDLA YMVNCI + K NK+L+LGGPD+G TM +QG++LA ACG + K AP+ LFD IIG L +LGQ++A DAAELARIGKYYAVEDMLT +P++K+GK TL+QHYE+IA +GQEYDPYT+M
Sbjct: 242 KCNPIAESDLAEYMVNCIEEVEKRNKVLNLGGPDEGLTMRQQGEILAEACGIDNPKFFGAPIVLFDWIIGALAWLGQWSAGAEDAAELARIGKYYAVEDMLTEKPEEKYGKITLRQHYERIAVEGQEYDPYTTM 375
BLAST of mRNA_P-wetherbeei_contig6681.1.1 vs. uniprot
Match: A0A0G4F228_VITBC (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F228_VITBC) HSP 1 Score: 170 bits (431), Expect = 1.000e-44 Identity = 83/146 (56.85%), Postives = 103/146 (70.55%), Query Frame = 3
Query: 888 SRCNPISESDLATYMVNCIGDPAKTNKILDLGGPDDGYTMEEQGKLLAVACGKEAKIVKAPVALFDAIIGGLDFLGQFAAPMADAAELARIGKYYAVEDMLTTEPDQKFGKTTLKQHYEKIARDGQEYDPYTSMFGKSNTPA*AER 1325
+RCNPISE DLA +MV+C+ DPAK N IL +GGPD TM +QG ++ A GKE K P++ FD IIG FLG++ M DAAEL RIGKYYA DMLTT P + +G TL++HY KIAR+GQEYDP+T+MF K PA A +
Sbjct: 203 TRCNPISEPDLAAFMVSCVKDPAKWNAILSVGGPDGALTMRDQGNMMFDALGKEPKFWTFPLSTFDPIIGAFAFLGRWFPQMEDAAELGRIGKYYAEYDMLTTAPGEIYGGDTLQEHYSKIAREGQEYDPFTTMFAKKKQPAAASK 348
BLAST of mRNA_P-wetherbeei_contig6681.1.1 vs. uniprot
Match: A0A6H5K5N4_9PHAE (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5N4_9PHAE) HSP 1 Score: 169 bits (428), Expect = 6.670e-44 Identity = 87/143 (60.84%), Postives = 105/143 (73.43%), Query Frame = 3
Query: 891 RCNPISESDLATYMVNCIGDPAKTNKILDLGGPDDGYTMEEQGKLLAVACGKEAKIVKAPVALFDAIIGGLDFL-GQFAAPMADAAELARIGKYYAVEDMLTTEPDQK---FGKTTLKQHYEKIARDGQEYDPYTSMF-GKSN 1304
+CNPI+E+DLATY+V+CI D +K N I ++GGPDDG TM QGKLL A GKE KI+K PV LFD IIG LD L G D AELA+IGKYYAVEDMLT +P +K FG TL QHY++IA +G +YDPYT++F GK N
Sbjct: 232 KCNPIAEADLATYLVDCITDKSKNNNIFNIGGPDDGLTMTAQGKLLFEAVGKEPKILKVPVLLFDVIIGALDLLAGILPKQFEDPAELAKIGKYYAVEDMLTVDPSEKATRFGTVTLGQHYKRIAVEGNDYDPYTTLFAGKKN 374
BLAST of mRNA_P-wetherbeei_contig6681.1.1 vs. uniprot
Match: B8BXU7_THAPS (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU7_THAPS) HSP 1 Score: 168 bits (426), Expect = 5.980e-43 Identity = 80/142 (56.34%), Postives = 109/142 (76.76%), Query Frame = 3
Query: 888 SRCNPISESDLATYMVNCIGDPAKTNKILDLGGPDDGYTMEEQGKLLAVACGKEAKIVKAPVALFDAIIGGLDFLGQF--AAPMADAAELARIGKYYAVEDMLTTEPDQKFGKTTLKQHYEKIARDGQEYDPYTSMFGKSNT 1307
+RCNPISE+DLATY+++CI D ++ NKI++LGGPD+ TM++QG++L + GKE AP+ LFD II L ++ + +AAEL RIGKYYAVEDMLTT+P++KFG TL++HY+KIA +GQEYDPYT+MF K+ T
Sbjct: 321 TRCNPISEADLATYLIDCIADKSRLNKIINLGGPDEPLTMKKQGEMLYASIGKEPNFFYAPLWLFDVIIDSLQWVADTFNSEKFENAAELGRIGKYYAVEDMLTTDPEEKFGTMTLQEHYDKIAVEGQEYDPYTTMFAKAPT 462
BLAST of mRNA_P-wetherbeei_contig6681.1.1 vs. uniprot
Match: K0SDG7_THAOC (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SDG7_THAOC) HSP 1 Score: 167 bits (424), Expect = 1.150e-42 Identity = 80/137 (58.39%), Postives = 107/137 (78.10%), Query Frame = 3
Query: 888 SRCNPISESDLATYMVNCIGDPAKTNKILDLGGPDDGYTMEEQGKLLAVACGKEAKIVKAPVALFDAIIGGLDFLGQF--AAPMADAAELARIGKYYAVEDMLTTEPDQKFGKTTLKQHYEKIARDGQEYDPYTSMF 1292
+RCNPISE+DLATY+++CI D +++NKI++LGGPD+ TM++QG++L A GKE AP+ LFD II L ++ + +AAEL RIGKYYAVEDMLTT+PD+KFG TL++HY+KIA +GQEYDPYT+MF
Sbjct: 282 TRCNPISEADLATYLIDCIADKSRSNKIINLGGPDEPLTMKKQGEMLYKAVGKEPNFFYAPLWLFDTIIDSLQWVSDTFNSEKFENAAELGRIGKYYAVEDMLTTDPDEKFGTMTLQEHYDKIAVEGQEYDPYTTMF 418
BLAST of mRNA_P-wetherbeei_contig6681.1.1 vs. uniprot
Match: A0A7R9ZKM2_9STRA (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKM2_9STRA) HSP 1 Score: 163 bits (413), Expect = 4.200e-42 Identity = 79/140 (56.43%), Postives = 106/140 (75.71%), Query Frame = 3
Query: 888 SRCNPISESDLATYMVNCIGDPAKTNKILDLGGPDDGYTMEEQGKLLAVACGKEAKIVKAPVALFDAIIGGLDFLGQF--AAPMADAAELARIGKYYAVEDMLTTEPDQKFGKTTLKQHYEKIARDGQEYDPYTSMFGKS 1301
+RCNPI+E+DLATY+++CI D ++ N IL+LGGPD+ TM+ QG++L + GKE AP+ LFDAII L ++ + +AAEL RIGKYYAVEDMLTTEP +KFG TL++HY++IA +GQEYDPYT+MF K+
Sbjct: 220 TRCNPIAEADLATYLIDCIADKSRENAILNLGGPDEPLTMKTQGEMLFQSVGKEPNFFFAPLWLFDAIIDSLQWVADTFSSEKFENAAELGRIGKYYAVEDMLTTEPSEKFGTITLQEHYDRIAVEGQEYDPYTTMFAKA 359
BLAST of mRNA_P-wetherbeei_contig6681.1.1 vs. uniprot
Match: A0A8J6CDJ4_DIALT (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDJ4_DIALT) HSP 1 Score: 164 bits (415), Expect = 4.480e-42 Identity = 77/139 (55.40%), Postives = 106/139 (76.26%), Query Frame = 3
Query: 894 CNPISESDLATYMVNCIGDPAKTNKILDLGGPDDGYTMEEQGKLLAVACGKEA-KIVKAPVALFDAIIGGLDFLGQF--AAPMADAAELARIGKYYAVEDMLTTEPDQKFGKTTLKQHYEKIARDGQEYDPYTSMFGKS 1301
CNPISE DLA +++C+ DPA+ N++ +LGGPD G +M EQGKL+A GKE K++ P+ LFD I+ L + + + DAAELARIG+YYA+EDMLTT P +++GKTTL++HYE+IAR+GQEYDPYT++F +S
Sbjct: 246 CNPISEPDLAAALIDCVADPAQLNRVWNLGGPDAGLSMVEQGKLIAQILGKEKPKLLGVPIGLFDVIVNALQWAATTFSSEKLEDAAELARIGRYYALEDMLTTAPSERYGKTTLREHYERIAREGQEYDPYTTVFARS 384
BLAST of mRNA_P-wetherbeei_contig6681.1.1 vs. uniprot
Match: A0A7S3AH15_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AH15_9EUKA) HSP 1 Score: 156 bits (394), Expect = 2.190e-41 Identity = 75/140 (53.57%), Postives = 103/140 (73.57%), Query Frame = 3
Query: 885 ASRCNPISESDLATYMVNCIGDPAKTNKILDLGGPDDGYTMEEQGKLLAVACGKE-AKIVKAPVALFDAIIGGLDFLGQF--AAPMADAAELARIGKYYAVEDMLTTEPDQKFGKTTLKQHYEKIARDGQEYDPYTSMFG 1295
++ CNPISE DLA +++ I D +K + + +LGGPD+G +M +QGKL+A GKE AK++ P+ +FD II GL + + DAAE RIG+YYA+EDMLTT+P K+GKTTL++HYE+IA +GQEYDPYTS+FG
Sbjct: 38 SATCNPISEPDLANALIDTITDSSKKDTVWNLGGPDEGMSMAQQGKLVADVLGKEEAKLLGVPIGIFDVIINGLQGAANLFKSEKLEDAAEFGRIGRYYAIEDMLTTDPADKYGKTTLREHYERIANEGQEYDPYTSVFG 177
BLAST of mRNA_P-wetherbeei_contig6681.1.1 vs. uniprot
Match: A0A7S2DQ69_9STRA (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQ69_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.480e-40 Identity = 78/152 (51.32%), Postives = 108/152 (71.05%), Query Frame = 3
Query: 885 ASRCNPISESDLATYMVNCIGDPAKTNKILDLGGPDDGYTMEEQGKLLAVACGKEAK-IVKAPVALFDAIIGGLDFLGQ------------FAAPMADAAELARIGKYYAVEDMLTTEPDQKFGKTTLKQHYEKIARDGQEYDPYTSMFGKS 1301
++ CNPISE DLA M++CI +PAK N+I ++GGPD+GY+ME QGK+++ GKE ++ P+ +FDAII L ++ ++ +DAAE RIGKYYAVEDMLT P+++FGK TLK++YEKIA +GQEYDPYT+MF K+
Sbjct: 236 SATCNPISEPDLAVAMIDCITNPAKKNQIWNIGGPDEGYSMEAQGKMISKIVGKEEPWLLPVPIGIFDAIIDSLQWMSDMSNSNAVLKERGWSKKFSDAAEFGRIGKYYAVEDMLTLNPEERFGKITLKENYEKIAVEGQEYDPYTTMFAKA 387 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6681.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6681.1.1 >prot_P-wetherbeei_contig6681.1.1 ID=prot_P-wetherbeei_contig6681.1.1|Name=mRNA_P-wetherbeei_contig6681.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp MPLVRKAAAKVHLLLEALKLNQRRSFCVAVASRCNPISESDLATYMVNCIback to top mRNA from alignment at P-wetherbeei_contig6681:2..2587+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6681.1.1 ID=mRNA_P-wetherbeei_contig6681.1.1|Name=mRNA_P-wetherbeei_contig6681.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2586bp|location=Sequence derived from alignment at P-wetherbeei_contig6681:2..2587+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6681:2..2587+ >mRNA_P-wetherbeei_contig6681.1.1 ID=mRNA_P-wetherbeei_contig6681.1.1|Name=mRNA_P-wetherbeei_contig6681.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig6681:2..2587+ (Phaeothamnion wetherbeei SAG_119_79)back to top |