mRNA_P-wetherbeei_contig6678.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6678.3.1
Unique NamemRNA_P-wetherbeei_contig6678.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6678.3.1 vs. uniprot
Match: A0A3C0TXA5_9PROT (EamA/RhaT family transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TXA5_9PROT)

HSP 1 Score: 317 bits (813), Expect = 1.430e-105
Identity = 161/275 (58.55%), Postives = 205/275 (74.55%), Query Frame = 1
Query:    4 PIKRPLSDWMMLFALVVTWGSAFALNKIALQSMPPLIMVAGRLVVAALVLLAVNGWQGHSLWLPWRRWGFFILLAVIGDCIPFFLISWGQLSVDSALAGILMAVIPLLTLLLAHLAHHTERITLYKLTGFVIGFGGIVLLVGPEALRNLGGASFIAQLAILGGAACYAINVVITPFNRVSNTMVTTTATILIAAIIMLPLALSQHPPASLDLTLESVFVVIVLGIFGTAIPTLVFFRLVASAGPTFYALINYMIPVWAVIIGALFLHERPEWNAY 828
            P +   SDW+ML  LV  WGSAFA+ ++ LQ++ PLI+V GRL ++A++LL V   QG+SL LPWR+WGFF +LA +G C+PF LISWGQL V+S LAGILMA+ PL+TLLL+H  +  E IT   L GF+IGF GIV+LVGP+AL +LGGA  I QLA++GGA CYA+N VITPFN+V NT+VT T T+L A +IML L L Q P   + L  E+   V+ L +F TAIP LVF+RL+ SAGP FY+L  Y+IPVWAV+ G +FL ERP+WNAY
Sbjct:    3 PPRHAFSDWVMLSVLVACWGSAFAMIEVGLQALSPLILVTGRLAISAVLLLGVCYAQGNSLKLPWRQWGFFFVLAAVGICMPFSLISWGQLGVNSGLAGILMAITPLMTLLLSHFVNKNEHITRLDLLGFLIGFAGIVVLVGPDALGDLGGAGLIFQLAVIGGAVCYAVNGVITPFNQVKNTLVTATGTMLAATLIMLLLVLLQTPSGEIRLDFEAAAAVLFLALFSTAIPHLVFYRLIDSAGPAFYSLSGYLIPVWAVVAGVVFLQERPDWNAY 277          
BLAST of mRNA_P-wetherbeei_contig6678.3.1 vs. uniprot
Match: A0A351T4P6_9PROT (EamA/RhaT family transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T4P6_9PROT)

HSP 1 Score: 295 bits (755), Expect = 1.130e-96
Identity = 153/277 (55.23%), Postives = 201/277 (72.56%), Query Frame = 1
Query:    1 MPIKRPLSDWMMLFALVVTWGSAFALNKIALQSMPPLIMVAGRLVVAALVLLAVNGWQGHSLWLPWRRWGFFILLAVIGDCIPFFLISWGQLSVDSALAGILMAVIPLLTLLLAHLAHHTERITLYKLTGFVIGFGGIVLLVGPEALRNLGGASFIAQLAILGGAACYAINVVITPFNRVSNTMVTTTATILIAAIIMLPLALSQHPPASLDLTLESVFVVIVLGIFGTAIPTLVFFRLVASAGPTFYALINYMIPVWAVIIGALFLHERPEWNAYA 831
            M  K PL+DW++L ALVV WGS+FALNKIAL ++PP+ +VA RL +AA++L     +  HSL L WR+W FF+LLA+IG+CIPFFLISWGQL +DSALAGILMA++PL+TLLL HL    E +      GF +GFGGI+LLVGP+AL  LGG + +AQLA+L GA CYA+N V+  FNR +  +VT+   ++ A ++M P+AL   P   LD+          LG+ GTA+ TLVFF+L+ SAGP F +L NY+IPVWAV+IGA+FL E+ +W AYA
Sbjct:    1 MRAKHPLADWLLLMALVVLWGSSFALNKIALTAIPPVSLVAYRLGLAAVLLAGAAFYLRHSLRLHWRQWWFFLLLALIGNCIPFFLISWGQLVIDSALAGILMAIMPLMTLLLTHLFLREEALGAGDAIGFALGFGGIILLVGPDALDRLGGDTLLAQLAVLFGAVCYAVNAVLARFNRENRPVVTSAGVMIAATLVMAPVALWHDPIGKLDIGFAPALAATALGMLGTALATLVFFKLIDSAGPAFLSLNNYLIPVWAVMIGAVFLDEQLDWTAYA 277          
BLAST of mRNA_P-wetherbeei_contig6678.3.1 vs. uniprot
Match: A0A243T397_9GAMM (Uncharacterized protein n=6 Tax=Halomonadaceae TaxID=28256 RepID=A0A243T397_9GAMM)

HSP 1 Score: 248 bits (633), Expect = 2.480e-78
Identity = 136/281 (48.40%), Postives = 193/281 (68.68%), Query Frame = 1
Query:    7 IKRPLSDWMMLFALVVTWGSAFALNKIALQSMPPLIMVAGRLVVAALVLLAVNGWQGHSLWLPWRR----WGFFILLAVIGDCIPFFLISWGQLSVDSALAGILMAVIPLLTLLLAHLAHHTERITLYKLTGFVIGFGGIVLLVGPEALRNLGGA--SFIAQLAILGGAACYAINVVITPFNRVSNTMVTTTATILIAAIIMLPLALSQHP---PASLDLTLESVFVVIVLGIFGTAIPTLVFFRLVASAGPTFYALINYMIPVWAVIIGALFLHERPEWN 822
            + RP S W++L AL + WGS+FAL +IA+  M P ++VAGR  +AA  LL +  W   +    W R    W F + +AV+G+ +PF LISWGQ  +DS LAGILMAV+PLLTL+LAH     ER+   +L GF+IGF G+++L+GP ALR LGG   + +AQLA+LGGA CYA+N +++     S+   T+   + +A ++ LPLA++  P   PA   L+  +++ V VLG+  TA+ ++++F LVA+AGPTF +LINY+IP+WAV+IGALFL ERPEWN
Sbjct:    1 MTRPASHWLLLVALAIVWGSSFALTRIAVAEMTPAMLVAGRNAIAAAGLLLLVVWLRRA----WPRGPQVWRFMLAIAVVGNMMPFLLISWGQQRIDSGLAGILMAVMPLLTLVLAHFLVSGERMAPRRLAGFLIGFAGVLVLIGPTALRELGGRGETLLAQLAVLGGAVCYAVNAIVSRHKPASDPWATSALVLAMAWLLTLPLAVATWPIDTPAVPVLSPAALWAVAVLGLICTALGSVIYFTLVAAAGPTFLSLINYLIPLWAVLIGALFLGERPEWN 277          
BLAST of mRNA_P-wetherbeei_contig6678.3.1 vs. uniprot
Match: A0A109UL83_9GAMM (Putative DMT superfamily transporter inner membrane protein n=4 Tax=Halomonas TaxID=2745 RepID=A0A109UL83_9GAMM)

HSP 1 Score: 244 bits (623), Expect = 7.800e-77
Identity = 141/279 (50.54%), Postives = 194/279 (69.53%), Query Frame = 1
Query:    7 IKRPLSDWMMLFALVVTWGSAFALNKIALQSMPPLIMVAGRLVVAALVLLAVNGWQGHSLWLPWRR-WGFFILLAVIGDCIPFFLISWGQLSVDSALAGILMAVIPLLTLLLAHLAHHTERITLYKLTGFVIGFGGIVLLVGPEALRNLGG--ASFIAQLAILGGAACYAINVVITPFNRVSNTMVTTTATILIAAIIMLPLALSQH----PPASLDLTLESVFVVIVLGIFGTAIPTLVFFRLVASAGPTFYALINYMIPVWAVIIGALFLHERPEWN 822
            +KRPLS W++L  L V WGS+FAL +IA+  + P ++VAGR +VAAL LL +    G + W   RR W F + +AVIG+  PF LISWGQ  +DS LAGILMAV+PL+TL+LAH     E +T  +L GF IGF GI+ L+GP A+R LGG   + +AQLA+L  A CYA+N +++     S+   T+   + +A ++ LPLA+S +    PPA L L+  +++ V++LGI  TA+ ++VFF LVA+AGPTF +LINY+IP+WAV+IG LFL ERPEWN
Sbjct:    1 MKRPLSHWVLLVTLAVLWGSSFALTRIAVAELTPAMVVAGRNMVAALGLLMLVVMLGRA-WPRGRRVWAFMLAIAVIGNMAPFLLISWGQQRIDSGLAGILMAVMPLVTLVLAHFLVAGETLTRQRLLGFTIGFVGILALIGPAAIRELGGHGETLMAQLAVLLAACCYAVNAIVSRHKPASDAWSTSALVLGMAWLLTLPLAVSPYLGEMPPA-LSLSAGALWAVLILGIICTAMGSVVFFTLVAAAGPTFLSLINYLIPLWAVVIGILFLGERPEWN 277          
BLAST of mRNA_P-wetherbeei_contig6678.3.1 vs. uniprot
Match: A0A317N8L4_9GAMM (Drug/metabolite transporter (DMT)-like permease n=3 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A317N8L4_9GAMM)

HSP 1 Score: 243 bits (621), Expect = 1.470e-76
Identity = 137/275 (49.82%), Postives = 189/275 (68.73%), Query Frame = 1
Query:    7 IKRPLSDWMMLFALVVTWGSAFALNKIALQSMPPLIMVAGRLVVAALVLLAVNGWQGHSLWLPWRRWGFFILLAVIGDCIPFFLISWGQLSVDSALAGILMAVIPLLTLLLAHLAHHTERITLYKLTGFVIGFGGIVLLVGPEALRNLGGA--SFIAQLAILGGAACYAINVVITPFNRVSNTMVTTTATILIAAIIMLPLALSQHPPA-SLDLTLESVFVVIVLGIFGTAIPTLVFFRLVASAGPTFYALINYMIPVWAVIIGALFLHERPEWN 822
            + RPLS W++L  L + WGS+FAL +IA+  + P ++V GR ++A+LVLL +    G +     R WGF + +AV+G+  PF LISWGQ  +DS LAGILMA++PL+TL+LAH     ER+T  +LTGFVIGF GI+ LVGP ALR LGG   + +AQLA+L  A CYAIN +I      S+   T+   + +A ++ LPLAL     A  + L+  +++ V+VLG+  TA+ ++V+F LVA+AGPTF +LINY+IP+WAV IG LFL ERPEWN
Sbjct:    1 MTRPLSHWLLLVTLSLLWGSSFALTRIAVAELDPAMLVVGRNLLASLVLLGLVLLLGRAWPRGGRLWGFMLAIAVVGNMTPFLLISWGQQRIDSGLAGILMAIMPLMTLVLAHCLVAGERMTSARLTGFVIGFAGILALVGPAALRELGGQGETLLAQLAVLLAACCYAINTIIARHKPASDAWSTSALVLGMACLLTLPLALLPAESAWPMGLSSGALWAVVVLGVLCTALGSVVYFTLVAAAGPTFLSLINYLIPLWAVAIGLLFLGERPEWN 275          
BLAST of mRNA_P-wetherbeei_contig6678.3.1 vs. uniprot
Match: A0A3N5WA29_9PROT (DMT family transporter n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WA29_9PROT)

HSP 1 Score: 240 bits (613), Expect = 3.050e-75
Identity = 135/278 (48.56%), Postives = 191/278 (68.71%), Query Frame = 1
Query:    1 MPIKRPLSDWMMLFALVVTWGSAFALNKIALQSMPPLIMVAGRLVVAALVLLAVNGWQGHSLWLPWRRWGFFILLAVIGDCIPFFLISWGQLSVDSALAGILMAVIPLLTLLLAHLAHHTERITLYKLTGFVIGFGGIVLLVGPEALRNLGGAS--FIAQLAILGGAACYAINVVITPFNRVSNTMVTTTATILIAAIIMLPLALSQHPPASLDLTLESVFVVIVLGIFGTAIPTLVFFRLVASAGPTFYALINYMIPVWAVIIGALFLHERPEWNAY 828
            +P++RPLSDWM+L ALV  WGS+F  N+IA+ S+PP  +VAGR+ VAA+VL A+    G  L  P R W  + L+AVIG+ IPF+LI+WGQ  V+SALAGILMA++PL T+ LAH     E +T  + TGF+IGF GIVLL+GP AL  +GG +   ++QLA+LGGA CYA+  V+T        +V   AT+L+A++I++P+AL    P +L  +  S   V+ LG+  TA+ T+++F L+ SAGP+F AL+NY+ P  AV++G L + E P  +AY
Sbjct:    2 LPVRRPLSDWMLLLALVAMWGSSFMFNRIAVASLPPWTVVAGRIGVAAIVLTAIVYAMGKRLPPPGRAWAPYALIAVIGNAIPFYLITWGQQVVESALAGILMAMMPLATIALAHFLIAGEHLTRQRATGFMIGFCGIVLLMGPAALAGVGGDAVRIVSQLAVLGGALCYALQSVLTRLIIKGEVLVAAAATLLVASLIVVPVALWLDRPWTLAPSNASAGAVVWLGVAPTALATVLYFMLIRSAGPSFMALVNYLSPGVAVMLGLLVMGETPRVSAY 279          
BLAST of mRNA_P-wetherbeei_contig6678.3.1 vs. uniprot
Match: A0A7V9VYB0_9GAMM (DMT family transporter n=1 Tax=Halomonas kenyensis TaxID=321266 RepID=A0A7V9VYB0_9GAMM)

HSP 1 Score: 234 bits (597), Expect = 6.580e-73
Identity = 133/275 (48.36%), Postives = 189/275 (68.73%), Query Frame = 1
Query:    7 IKRPLSDWMMLFALVVTWGSAFALNKIALQSMPPLIMVAGRLVVAALVLLAVNGWQGHSLWLPWRRWGFFILLAVIGDCIPFFLISWGQLSVDSALAGILMAVIPLLTLLLAHLAHHTERITLYKLTGFVIGFGGIVLLVGPEALRNLGGA--SFIAQLAILGGAACYAINVVITPFNRVSNTMVTTTATILIAAIIMLPLALSQHP---PASLDLTLESVFVVIVLGIFGTAIPTLVFFRLVASAGPTFYALINYMIPVWAVIIGALFLHERPE 816
            + RP+S W++L AL V WGS+FAL +IA+  M P ++VAGR V+AA  L+ +      +     R W F + +A++G+ +PF LISWGQ  +DS LAGILMAV+PLLTL+LAH     ER+  ++L GFV+GF GI+ LVGP AL  +GG   + +AQLA+L GAACYA+N +I+     S+   T+   + +A ++ +PLA +  P   P    L+  +++ V+VLG+  TA+ ++V+F LVA+AGPTF +LINY+IPVWAV+IGALFL ERPE
Sbjct:    1 MSRPVSHWLLLVALAVMWGSSFALTRIAVAEMTPAMLVAGRNVIAACGLMLLVLLLRRAFPRGRRVWSFMLAIAIVGNMMPFLLISWGQQRIDSGLAGILMAVMPLLTLVLAHFLVPGERMVPHRLAGFVVGFLGILTLVGPTALLEMGGQGETLLAQLAVLAGAACYAVNAIISRHKPSSDAWSTSALVLGMAWLLTMPLAAATWPVDMPIVPVLSAGALWAVVVLGLVCTALGSVVYFTLVAAAGPTFLSLINYLIPVWAVLIGALFLGERPE 275          
BLAST of mRNA_P-wetherbeei_contig6678.3.1 vs. uniprot
Match: A0A6C1SW03_9PROT (DMT family transporter n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6C1SW03_9PROT)

HSP 1 Score: 229 bits (584), Expect = 4.570e-71
Identity = 124/260 (47.69%), Postives = 175/260 (67.31%), Query Frame = 1
Query:   58 WGSAFALNKIALQSMPPLIMVAGRLVVAALVLLAVNGWQGHSLWLPWRRWGFFILLAVIGDCIPFFLISWGQLSVDSALAGILMAVIPLLTLLLAHLAHHTERITLYKLTGFVIGFGGIVLLVGPEALRNLGG--ASFIAQLAILGGAACYAINVVITPFNRVSNTMVTTTATILIAAIIMLPLALSQHPPASLDLTLESVFVVIVLGIFGTAIPTLVFFRLVASAGPTFYALINYMIPVWAVIIGALFLHERPEWNAYA 831
            WGS+F L K+A+ ++PP  +VAGRL +AA VL+ V    G  L    R W F I++A +G+ IPF+LI+WGQ ++ S LAGILMA +PL+TL+LAH     ER+T  +  GF+IGF GIV+L+GP+AL  LGG  +  IAQLA+LGGA CYA+N +I      S  +   TA  L+A+++M+P AL    P +L     +V  +++L +  TA+ T+V+F+LV  AGP+F +LINY+IPVWAV +G + L E P W+A A
Sbjct:    2 WGSSFLLVKVAVAAIPPASLVAGRLAIAAAVLIGVIIATGRRLRQSRRHWAFAIVMAAVGNAIPFWLIAWGQQAISSGLAGILMAAMPLVTLVLAHGFVEGERLTRARAAGFLIGFSGIVVLIGPDALLELGGHRSDLIAQLAVLGGAVCYAVNAIIARHRPQSGALEAATAVALMASVMMIPAALIVDAPLTLVPGPAAVASLLILAVVSTAVATVVYFKLVTEAGPSFLSLINYLIPVWAVALGIIILREEPTWSALA 261          
BLAST of mRNA_P-wetherbeei_contig6678.3.1 vs. uniprot
Match: UPI0014592CC6 (EamA family transporter n=2 Tax=Azoarcus taiwanensis TaxID=666964 RepID=UPI0014592CC6)

HSP 1 Score: 228 bits (582), Expect = 1.040e-70
Identity = 132/277 (47.65%), Postives = 181/277 (65.34%), Query Frame = 1
Query:    7 IKRPLSDWMMLFALVVTWGSAFALNKIALQSMPPLIMVAGRLVVAALVLLAVNGWQGHSLWLPWRRWGFFILLAVIGDCIPFFLISWGQLSVDSALAGILMAVIPLLTLLLAHLAHHTERITLYKLTGFVIGFGGIVLLVGPEALRNLGGAS--FIAQLAILGGAACYAINVVITPFNRVSNTMVTTTATILIAAIIMLPLALSQHPPASLDLTLESVFVVIVLGIFGTAIPTLVFFRLVASAGPTFYALINYMIPVWAVIIGALFLHERPEWNAYA 831
            ++ PLS W++LFALV  WGS+F L KIA+ S+ P  +V GRLV+AALVL  V    G  +    R W    L+AV+G+ +PF LI+WGQ  VDS LAGILMAV+PL TL+LAH     ER+   ++ GF+IGF GIV+LVGP+AL  LGG+    +AQLAILGGA  YA+N ++      ++  +T+ A +  AA++ +P+++             ++  V  LG+  TA  T+ +FRLV  AGPTF + INY+IP+WAV +G LFL ERP+WNA A
Sbjct:    1 MRHPLSHWLLLFALVAMWGSSFLLTKIAVGSLAPAQVVTGRLVLAALVLAVVAVVLGRGMPRGGRAWLHLGLMAVVGNVLPFMLITWGQQRVDSGLAGILMAVMPLATLVLAHFFVDGERLRRNRIIGFLIGFVGIVVLVGPQALVQLGGSGEILVAQLAILGGAFAYAVNTILARHRPAADVWITSAAVLGFAALLSMPMSVXXXXXXXXPQ--GALMAVATLGLVSTAAATVGYFRLVTLAGPTFLSQINYLIPLWAVGMGMLFLGERPQWNAVA 275          
BLAST of mRNA_P-wetherbeei_contig6678.3.1 vs. uniprot
Match: A0A1P8R2X9_9GAMM (Uncharacterized protein n=5 Tax=Halomonas TaxID=2745 RepID=A0A1P8R2X9_9GAMM)

HSP 1 Score: 229 bits (583), Expect = 1.120e-70
Identity = 129/286 (45.10%), Postives = 189/286 (66.08%), Query Frame = 1
Query:    4 PIKRPLSDWMMLFALVVTWGSAFALNKIALQSMPPLIMVAGRLVVAALVLLAVNGWQGHSLWLPWRR--------WGFFILLAVIGDCIPFFLISWGQLSVDSALAGILMAVIPLLTLLLAHLAHHTERITLYKLTGFVIGFGGIVLLVGPEALRNLGGA--SFIAQLAILGGAACYAINVVITPFNRVSNTMVTTTATILIAAIIMLPLALSQHPPASLDL---TLESVFVVIVLGIFGTAIPTLVFFRLVASAGPTFYALINYMIPVWAVIIGALFLHERPEWN 822
            P  RP S W +L +LV+ WGS+F+L +IA+  + P ++V GR  VAAL+L          L L WRR        W +  ++AVIG+ +PF LISWGQ  +DS LAGILMA +PL+TL+LAH     ER+  +K+TGFV+GF GIV+L+GP AL  LGG   + +AQLA+LG + CYA+N ++      S+   T+   + +A ++ LP+AL+    A+L +   +  +V+ V++LG+  TA  ++V+F+L+A+AGPTF +LINY+IP+WAV+IG LF+ ER  WN
Sbjct:    3 PAGRPWSHWGLLISLVMLWGSSFSLTRIAVAQLTPSMVVMGRNAVAALLL--------GVLLLVWRRGLPRGRRVWAYMAVIAVIGNAMPFLLISWGQQRIDSGLAGILMAAMPLVTLVLAHFYIDGERLARHKVTGFVVGFVGIVVLIGPAALAELGGQGETLVAQLAVLGASICYAVNTIVARRKPASDVYATSAVVLGMAMLLTLPMALAPVWQATLPMPEPSATAVWAVLLLGVMSTAAGSVVYFKLIAAAGPTFLSLINYLIPLWAVMIGTLFMAERLAWN 280          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6678.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TXA5_9PROT1.430e-10558.55EamA/RhaT family transporter n=1 Tax=Alphaproteoba... [more]
A0A351T4P6_9PROT1.130e-9655.23EamA/RhaT family transporter n=1 Tax=Alphaproteoba... [more]
A0A243T397_9GAMM2.480e-7848.40Uncharacterized protein n=6 Tax=Halomonadaceae Tax... [more]
A0A109UL83_9GAMM7.800e-7750.54Putative DMT superfamily transporter inner membran... [more]
A0A317N8L4_9GAMM1.470e-7649.82Drug/metabolite transporter (DMT)-like permease n=... [more]
A0A3N5WA29_9PROT3.050e-7548.56DMT family transporter n=1 Tax=Betaproteobacteria ... [more]
A0A7V9VYB0_9GAMM6.580e-7348.36DMT family transporter n=1 Tax=Halomonas kenyensis... [more]
A0A6C1SW03_9PROT4.570e-7147.69DMT family transporter n=1 Tax=Rhodospirillales ba... [more]
UPI0014592CC61.040e-7047.65EamA family transporter n=2 Tax=Azoarcus taiwanens... [more]
A0A1P8R2X9_9GAMM1.120e-7045.10Uncharacterized protein n=5 Tax=Halomonas TaxID=27... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6678contigP-wetherbeei_contig6678:2517..3347 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog768671.ThimaDRAFT_3399
PFAMsEamA
Model size831
Max annot lvl135613|Chromatiales
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.04e-62
EggNOG OGsCOG0697@1|root,COG0697@2|Bacteria,1MZQM@1224|Proteobacteria,1SZQ8@1236|Gammaproteobacteria,1WZ07@135613|Chromatiales
DescriptionEamA-like transporter family
Cds size831
COG categoryEG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186929.3776655-CDS-P-wetherbeei_contig6678:2516..33471683186929.3776655-CDS-P-wetherbeei_contig6678:2516..3347Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6678 2517..3347 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6678.3.1prot_P-wetherbeei_contig6678.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6678 2517..3347 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6678.3.1

>prot_P-wetherbeei_contig6678.3.1 ID=prot_P-wetherbeei_contig6678.3.1|Name=mRNA_P-wetherbeei_contig6678.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=277bp
MPIKRPLSDWMMLFALVVTWGSAFALNKIALQSMPPLIMVAGRLVVAALV
LLAVNGWQGHSLWLPWRRWGFFILLAVIGDCIPFFLISWGQLSVDSALAG
ILMAVIPLLTLLLAHLAHHTERITLYKLTGFVIGFGGIVLLVGPEALRNL
GGASFIAQLAILGGAACYAINVVITPFNRVSNTMVTTTATILIAAIIMLP
LALSQHPPASLDLTLESVFVVIVLGIFGTAIPTLVFFRLVASAGPTFYAL
INYMIPVWAVIIGALFLHERPEWNAYA
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mRNA from alignment at P-wetherbeei_contig6678:2517..3347+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6678.3.1 ID=mRNA_P-wetherbeei_contig6678.3.1|Name=mRNA_P-wetherbeei_contig6678.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=831bp|location=Sequence derived from alignment at P-wetherbeei_contig6678:2517..3347+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCATAAAACGCCCCCTGAGCGACTGGATGATGCTGTTCGCCCTGGT GGTGACCTGGGGATCGGCGTTCGCCCTCAACAAGATCGCCCTTCAGTCGA TGCCGCCCCTGATCATGGTGGCGGGCCGTCTCGTTGTAGCCGCACTGGTC CTGCTGGCGGTCAATGGCTGGCAGGGGCATTCCCTATGGCTGCCCTGGCG GCGATGGGGATTTTTTATCCTCCTTGCTGTGATCGGGGATTGCATCCCGT TCTTTTTAATTAGCTGGGGGCAACTCAGTGTGGACAGCGCGCTTGCGGGC ATCCTCATGGCGGTGATCCCGTTGCTGACACTGCTGTTGGCGCATCTGGC GCATCACACCGAGCGCATCACGCTCTATAAACTTACCGGATTCGTAATCG GCTTTGGCGGCATTGTACTGCTGGTCGGGCCAGAGGCCCTGCGCAATCTG GGCGGCGCAAGCTTTATCGCGCAACTCGCCATACTTGGCGGGGCCGCCTG CTACGCCATCAATGTCGTGATCACGCCATTCAATCGCGTCAGCAACACGA TGGTCACCACAACCGCCACCATTCTGATCGCCGCAATCATCATGCTGCCT CTGGCGCTGTCACAACACCCGCCAGCCAGTCTCGATCTAACCCTTGAGTC AGTTTTCGTAGTGATTGTTCTGGGAATATTTGGCACAGCCATTCCGACGC TGGTGTTCTTTCGCCTGGTCGCCAGCGCCGGGCCAACCTTTTACGCCCTG ATCAATTACATGATCCCGGTATGGGCGGTCATCATCGGCGCGCTATTCCT GCACGAACGCCCGGAGTGGAACGCCTACGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6678:2517..3347+

>mRNA_P-wetherbeei_contig6678.3.1 ID=mRNA_P-wetherbeei_contig6678.3.1|Name=mRNA_P-wetherbeei_contig6678.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=831bp|location=Sequence derived from alignment at P-wetherbeei_contig6678:2517..3347+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCATAAAACGCCCCCTGAGCGACTGGATGATGCTGTTCGCCCTGGT
GGTGACCTGGGGATCGGCGTTCGCCCTCAACAAGATCGCCCTTCAGTCGA
TGCCGCCCCTGATCATGGTGGCGGGCCGTCTCGTTGTAGCCGCACTGGTC
CTGCTGGCGGTCAATGGCTGGCAGGGGCATTCCCTATGGCTGCCCTGGCG
GCGATGGGGATTTTTTATCCTCCTTGCTGTGATCGGGGATTGCATCCCGT
TCTTTTTAATTAGCTGGGGGCAACTCAGTGTGGACAGCGCGCTTGCGGGC
ATCCTCATGGCGGTGATCCCGTTGCTGACACTGCTGTTGGCGCATCTGGC
GCATCACACCGAGCGCATCACGCTCTATAAACTTACCGGATTCGTAATCG
GCTTTGGCGGCATTGTACTGCTGGTCGGGCCAGAGGCCCTGCGCAATCTG
GGCGGCGCAAGCTTTATCGCGCAACTCGCCATACTTGGCGGGGCCGCCTG
CTACGCCATCAATGTCGTGATCACGCCATTCAATCGCGTCAGCAACACGA
TGGTCACCACAACCGCCACCATTCTGATCGCCGCAATCATCATGCTGCCT
CTGGCGCTGTCACAACACCCGCCAGCCAGTCTCGATCTAACCCTTGAGTC
AGTTTTCGTAGTGATTGTTCTGGGAATATTTGGCACAGCCATTCCGACGC
TGGTGTTCTTTCGCCTGGTCGCCAGCGCCGGGCCAACCTTTTACGCCCTG
ATCAATTACATGATCCCGGTATGGGCGGTCATCATCGGCGCGCTATTCCT
GCACGAACGCCCGGAGTGGAACGCCTACGCC
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