mRNA_P-wetherbeei_contig6678.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6678.1.1
Unique NamemRNA_P-wetherbeei_contig6678.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6678.1.1 vs. uniprot
Match: A0A3C0TXC1_9PROT (Methylcrotonoyl-CoA carboxylase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TXC1_9PROT)

HSP 1 Score: 704 bits (1816), Expect = 3.340e-254
Identity = 345/392 (88.01%), Postives = 376/392 (95.92%), Query Frame = 1
Query:    1 MAVLSSIINVRGDAFKKNAAHMEALVADLRARVAVTSLGGNAKSRERHVSRGKLLPRDRIENLIDPGAPFLEFSQLAAYGMYDDDIHGAGILTGVGRVAGQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAIGIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEIVSAEDLGGADVHSRISGVTDHYAMNDAHALSIARRIVGNLNRRKQAKLAVQPPRDPAFDIAELNGVIPANAQAQYDVREVIARIVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESAVKGAHFIELCAQRNIPLVFLQNISGFMVGRKYEAGGIAK 1176
            M +L+S IN RG+AF+KNAA M+ LVADLRARVA+ +LGGNAKSRERHV+RGKLLPRDRIENL+DPGAPFLE SQLAA+GMY++DIHGAGILTG+GRV+GQECVIVCNDATIKGGTYYP+TVKKHLRAQEVAM+NHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSA+GIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEIVSAE+LGGADVHSR+SGVTDHYAMNDAHALS+ARRIV +LNRRKQ+ LAV PPRDPA+D +EL+GV+P + Q+QYD REVIAR+VD SEFDEFKKLYG TLVTGFAHIHGYPVGILANNGILFSESA+KGAHFIELCAQR+IPLVFLQNISGFMVGRKYEAGGIAK
Sbjct:    1 MGLLTSGINTRGEAFRKNAAQMQELVADLRARVALAALGGNAKSRERHVARGKLLPRDRIENLVDPGAPFLELSQLAAHGMYEEDIHGAGILTGIGRVSGQECVIVCNDATIKGGTYYPVTVKKHLRAQEVAMDNHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAMGIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEIVSAEELGGADVHSRVSGVTDHYAMNDAHALSLARRIVASLNRRKQSHLAVSPPRDPAYDPSELDGVVPVSLQSQYDAREVIARLVDASEFDEFKKLYGATLVTGFAHIHGYPVGILANNGILFSESALKGAHFIELCAQRHIPLVFLQNISGFMVGRKYEAGGIAK 392          
BLAST of mRNA_P-wetherbeei_contig6678.1.1 vs. uniprot
Match: A0A353LS26_9PROT (Methylcrotonoyl-CoA carboxylase (Fragment) n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LS26_9PROT)

HSP 1 Score: 684 bits (1765), Expect = 1.570e-246
Identity = 341/392 (86.99%), Postives = 361/392 (92.09%), Query Frame = 1
Query:    1 MAVLSSIINVRGDAFKKNAAHMEALVADLRARVAVTSLGGNAKSRERHVSRGKLLPRDRIENLIDPGAPFLEFSQLAAYGMYDDDIHGAGILTGVGRVAGQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAIGIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEIVSAEDLGGADVHSRISGVTDHYAMNDAHALSIARRIVGNLNRRKQAKLAVQPPRDPAFDIAELNGVIPANAQAQYDVREVIARIVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESAVKGAHFIELCAQRNIPLVFLQNISGFMVGRKYEAGGIAK 1176
            MAVL++ IN R DAF++NAAHM+ALVA LR  VA  SLGGN KSRERHV+RGKLLPRDRIE LIDPGAPFLEFSQLAA+ MYD+ IH +GILTG+GR++GQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSA+GIPQIA VMGSCTAGGAYVPAMSDESIIVR QGTIFLGGPPLVKAATGEIV+AE+LGGADVHSR SGVTDHYAMNDAHAL I RRIV NLNR K+  LAVQPPR P +D AEL GVIP  A  QYDVREVIAR+VDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESA+KGAHFIELCAQRNIPL+FLQNISGFMVG KYEAGGIAK
Sbjct:    1 MAVLATAINTRSDAFRENAAHMQALVAQLREDVATASLGGNQKSRERHVARGKLLPRDRIERLIDPGAPFLEFSQLAAWNMYDEPIHASGILTGIGRISGQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAMGIPQIAAVMGSCTAGGAYVPAMSDESIIVRQQGTIFLGGPPLVKAATGEIVTAEELGGADVHSRTSGVTDHYAMNDAHALGIVRRIVANLNRPKRTALAVQPPRAPHYDPAELGGVIPRKAGVQYDVREVIARLVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESALKGAHFIELCAQRNIPLLFLQNISGFMVGAKYEAGGIAK 392          
BLAST of mRNA_P-wetherbeei_contig6678.1.1 vs. uniprot
Match: A0A352KAW3_9PROT (Methylcrotonoyl-CoA carboxylase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KAW3_9PROT)

HSP 1 Score: 684 bits (1766), Expect = 7.160e-245
Identity = 341/392 (86.99%), Postives = 361/392 (92.09%), Query Frame = 1
Query:    1 MAVLSSIINVRGDAFKKNAAHMEALVADLRARVAVTSLGGNAKSRERHVSRGKLLPRDRIENLIDPGAPFLEFSQLAAYGMYDDDIHGAGILTGVGRVAGQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAIGIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEIVSAEDLGGADVHSRISGVTDHYAMNDAHALSIARRIVGNLNRRKQAKLAVQPPRDPAFDIAELNGVIPANAQAQYDVREVIARIVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESAVKGAHFIELCAQRNIPLVFLQNISGFMVGRKYEAGGIAK 1176
            MAVL++ IN R DAF++NAAHM+ALVA LR  VA  SLGGN KSRERHV+RGKLLPRDRIE LIDPGAPFLEFSQLAA+ MYD+ IH +GILTG+GR++GQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSA+GIPQIA VMGSCTAGGAYVPAMSDESIIVR QGTIFLGGPPLVKAATGEIV+AE+LGGADVHSR SGVTDHYAMNDAHAL I RRIV NLNR K+  LAVQPPR P +D AEL GVIP  A  QYDVREVIAR+VDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESA+KGAHFIELCAQRNIPL+FLQNISGFMVG KYEAGGIAK
Sbjct:    1 MAVLATAINTRSDAFRENAAHMQALVAQLREDVATASLGGNQKSRERHVARGKLLPRDRIERLIDPGAPFLEFSQLAAWNMYDEPIHASGILTGIGRISGQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAMGIPQIAAVMGSCTAGGAYVPAMSDESIIVRQQGTIFLGGPPLVKAATGEIVTAEELGGADVHSRTSGVTDHYAMNDAHALGIVRRIVANLNRPKRTALAVQPPRAPRYDPAELGGVIPRKAGVQYDVREVIARLVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESALKGAHFIELCAQRNIPLLFLQNISGFMVGAKYEAGGIAK 392          
BLAST of mRNA_P-wetherbeei_contig6678.1.1 vs. uniprot
Match: I3TNS5_TISMK (Carboxyltransferase subunit of acetyl-CoA carboxylase n=4 Tax=Tistrella TaxID=171436 RepID=I3TNS5_TISMK)

HSP 1 Score: 624 bits (1609), Expect = 5.390e-221
Identity = 305/392 (77.81%), Postives = 347/392 (88.52%), Query Frame = 1
Query:    1 MAVLSSIINVRGDAFKKNAAHMEALVADLRARVAVTSLGGNAKSRERHVSRGKLLPRDRIENLIDPGAPFLEFSQLAAYGMYDDDIHGAGILTGVGRVAGQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAIGIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEIVSAEDLGGADVHSRISGVTDHYAMNDAHALSIARRIVGNLNRRKQAKLAVQPPRDPAFDIAELNGVIPANAQAQYDVREVIARIVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESAVKGAHFIELCAQRNIPLVFLQNISGFMVGRKYEAGGIAK 1176
            M  + S +N R D F+ NAAHM A V DL+A+VA  + GG   +R+RHVSRGKLLPRDR+  L+DPG+PFLE SQ AA+GMY ++I GAGI+TG+GRV+G ECVIV NDAT+KGGTYYP+TVKKHLRAQEVAM+N LPCIYLVDSGGANLP Q E+FPD+ HFG+IFYNQANMSA+GIPQIAVVMGSCTAGGAYVPAMSDE+IIVRNQGTIFLGGPPLVKAATGE+V+AEDLGGADVHSRISGVTDHYA NDAHAL IARRIV +LN RK A LA+  PRDPA+D +EL G+IP +++  YDVREVIAR+VDGSEFDEFK LYGTTLVTGFAH++GYPVGI+ANNGILFSESA KGAHFIELCAQR IPL+FLQNI+GFMVGRKYE+GGIAK
Sbjct:    1 MRQIRSAVNTRSDEFRDNAAHMRAQVDDLKAKVAGIAAGGGEAARQRHVSRGKLLPRDRVRALLDPGSPFLELSQFAAFGMYGENIPGAGIITGIGRVSGVECVIVANDATVKGGTYYPMTVKKHLRAQEVAMQNRLPCIYLVDSGGANLPQQDEVFPDKEHFGRIFYNQANMSAMGIPQIAVVMGSCTAGGAYVPAMSDETIIVRNQGTIFLGGPPLVKAATGEVVTAEDLGGADVHSRISGVTDHYAQNDAHALEIARRIVADLNWRKPASLALATPRDPAYDPSELGGIIPRDSRKPYDVREVIARVVDGSEFDEFKALYGTTLVTGFAHLYGYPVGIVANNGILFSESAQKGAHFIELCAQRGIPLMFLQNITGFMVGRKYESGGIAK 392          
BLAST of mRNA_P-wetherbeei_contig6678.1.1 vs. uniprot
Match: A0A3M1JUI7_9PROT (Methylcrotonoyl-CoA carboxylase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JUI7_9PROT)

HSP 1 Score: 622 bits (1603), Expect = 4.400e-220
Identity = 301/392 (76.79%), Postives = 346/392 (88.27%), Query Frame = 1
Query:    1 MAVLSSIINVRGDAFKKNAAHMEALVADLRARVAVTSLGGNAKSRERHVSRGKLLPRDRIENLIDPGAPFLEFSQLAAYGMYDDDIHGAGILTGVGRVAGQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAIGIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEIVSAEDLGGADVHSRISGVTDHYAMNDAHALSIARRIVGNLNRRKQAKLAVQPPRDPAFDIAELNGVIPANAQAQYDVREVIARIVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESAVKGAHFIELCAQRNIPLVFLQNISGFMVGRKYEAGGIAK 1176
            M+V+ S ++VRGDAF +NAAHM++LV DLRA+V     GG AK+RERH+SRGKLLPRDR++ LIDPG PFLE SQ AAY +Y+D I  AGI+TG+GRV+G+EC+IVCNDAT+KGGTYYP+TVKKHLRAQEVA EN LPCIYLVDSGGANLPNQ E+FPD+ HFG+IFYNQA MSA+GIPQIAVVMGSCTAGGAYVPAM+DE IIVR QGTIFLGGPPLVKAATGE+V+AE+LGGADVH+++SGV DHYA+ND HAL+IARRIV  LN RK   + ++ P  PA+D AEL GVIP + +  YDVREVIAR+VDGSEFDEFKK YGTTLVTGFAHIHGYPVGI+ANNG+LFSESAVKGAHF+ELC QR IPLVFLQNI+GFMVGRKYEAGGIAK
Sbjct:    1 MSVIHSTLDVRGDAFAQNAAHMQSLVDDLRAKVDEIKQGGGAKARERHLSRGKLLPRDRVKALIDPGTPFLELSQFAAYQVYEDTIPAAGIITGIGRVSGRECMIVCNDATVKGGTYYPLTVKKHLRAQEVARENRLPCIYLVDSGGANLPNQDEVFPDKEHFGRIFYNQATMSAMGIPQIAVVMGSCTAGGAYVPAMADECIIVREQGTIFLGGPPLVKAATGEVVTAEELGGADVHAKVSGVADHYALNDEHALTIARRIVAGLNSRKDVPVVLREPMAPAYDPAELYGVIPRDTRTPYDVREVIARVVDGSEFDEFKKYYGTTLVTGFAHIHGYPVGIVANNGVLFSESAVKGAHFVELCCQRRIPLVFLQNITGFMVGRKYEAGGIAK 392          
BLAST of mRNA_P-wetherbeei_contig6678.1.1 vs. uniprot
Match: UPI00146CDB4F (methylcrotonoyl-CoA carboxylase n=2 Tax=Sneathiella TaxID=510690 RepID=UPI00146CDB4F)

HSP 1 Score: 619 bits (1595), Expect = 7.230e-219
Identity = 301/392 (76.79%), Postives = 344/392 (87.76%), Query Frame = 1
Query:    1 MAVLSSIINVRGDAFKKNAAHMEALVADLRARVAVTSLGGNAKSRERHVSRGKLLPRDRIENLIDPGAPFLEFSQLAAYGMYDDDIHGAGILTGVGRVAGQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAIGIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEIVSAEDLGGADVHSRISGVTDHYAMNDAHALSIARRIVGNLNRRKQAKLAVQPPRDPAFDIAELNGVIPANAQAQYDVREVIARIVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESAVKGAHFIELCAQRNIPLVFLQNISGFMVGRKYEAGGIAK 1176
            M VL S +N R D +K NAAHM++LV DL+ +V++   GG  ++RE+H+SRGKLLPR+R+  L+DPG+PFLEFSQ+AA+ MY  DI+ AGI+TG+GRV+G+ECVIVCNDAT+KGGTYYP+TVKKHLRAQEVA +N+LPCIYLVDSGGANLPNQ ++FPDR HFG+IFYNQANMSA GIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFL GPPLVKAATGEIVSAEDLGGADVHSR SGVTDHYA ND HAL IAR +V  LNR K   L ++ P DP +D  EL G+IP + +  +DVREVIARIVDGSEFDEFKKLYGT+LVTGFAHIHGYPVGI+ANNGILFSESAVKGAHFIELC QRNIPLVFLQNI+GFMVG+KYE+GGIAK
Sbjct:    1 MPVLKSNLNTRSDEYKANAAHMQSLVDDLKEKVSIIKQGGGERAREKHLSRGKLLPRERVRKLLDPGSPFLEFSQMAAWDMYSGDINSAGIITGIGRVSGRECVIVCNDATVKGGTYYPMTVKKHLRAQEVAEQNNLPCIYLVDSGGANLPNQQDVFPDREHFGRIFYNQANMSAKGIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLAGPPLVKAATGEIVSAEDLGGADVHSRTSGVTDHYAENDLHALEIARNVVATLNRPKPMPLDIRKPLDPLYDARELYGLIPRDTRQPFDVREVIARIVDGSEFDEFKKLYGTSLVTGFAHIHGYPVGIVANNGILFSESAVKGAHFIELCCQRNIPLVFLQNITGFMVGQKYESGGIAK 392          
BLAST of mRNA_P-wetherbeei_contig6678.1.1 vs. uniprot
Match: A0A437QIH0_9PROT (Methylcrotonoyl-CoA carboxylase n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QIH0_9PROT)

HSP 1 Score: 618 bits (1594), Expect = 1.030e-218
Identity = 304/392 (77.55%), Postives = 345/392 (88.01%), Query Frame = 1
Query:    1 MAVLSSIINVRGDAFKKNAAHMEALVADLRARVAVTSLGGNAKSRERHVSRGKLLPRDRIENLIDPGAPFLEFSQLAAYGMYDDDIHGAGILTGVGRVAGQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAIGIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEIVSAEDLGGADVHSRISGVTDHYAMNDAHALSIARRIVGNLNRRKQAKLAVQPPRDPAFDIAELNGVIPANAQAQYDVREVIARIVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESAVKGAHFIELCAQRNIPLVFLQNISGFMVGRKYEAGGIAK 1176
            MAVL + +N+RGD  K NAA M  L+ DL  +VA   LGG  ++RERHV RGKLLPRDR+  L+DPGAPFLEFSQLAA+ +YDDD+ G G++TG+GRV+GQEC+IV NDAT+KGGTYYPITVKKH+RA E+A +NHLPCIYLVDSGGANLPNQ E+FPDR+HFG+IFY+QANMSA GIPQIA VMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGE+VSAEDLGGAD HSRISGVTDHYA ND HAL+I R+IVGNLNR K A++ V+ P  PA+D AE+  VIPA+A+  YDVREVIARIVDGSEFDEFK LYGTTLV GFAHI GYPVGI+ANNGILFSES++KGAHF+ELC+QR IPLVFLQNI+GFMVGRKYEAGGIAK
Sbjct:    1 MAVLKTSVNLRGDEAKANAAAMTDLIGDLEDKVAKIKLGGGKRARERHVGRGKLLPRDRVRTLLDPGAPFLEFSQLAAHEVYDDDVPGGGVITGIGRVSGQECLIVVNDATVKGGTYYPITVKKHVRALEIAEQNHLPCIYLVDSGGANLPNQDEVFPDRDHFGRIFYSQANMSAKGIPQIAAVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEVVSAEDLGGADTHSRISGVTDHYAENDHHALAIVRQIVGNLNRAKPAQVKVKAPVAPAYDPAEIYNVIPADARKPYDVREVIARIVDGSEFDEFKHLYGTTLVCGFAHIWGYPVGIVANNGILFSESSLKGAHFVELCSQRKIPLVFLQNITGFMVGRKYEAGGIAK 392          
BLAST of mRNA_P-wetherbeei_contig6678.1.1 vs. uniprot
Match: A0A2U1WQY8_9PROT (Methylcrotonoyl-CoA carboxylase n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1WQY8_9PROT)

HSP 1 Score: 617 bits (1590), Expect = 4.160e-218
Identity = 300/392 (76.53%), Postives = 348/392 (88.78%), Query Frame = 1
Query:    1 MAVLSSIINVRGDAFKKNAAHMEALVADLRARVAVTSLGGNAKSRERHVSRGKLLPRDRIENLIDPGAPFLEFSQLAAYGMYDDDIHGAGILTGVGRVAGQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAIGIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEIVSAEDLGGADVHSRISGVTDHYAMNDAHALSIARRIVGNLNRRKQAKLAVQPPRDPAFDIAELNGVIPANAQAQYDVREVIARIVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESAVKGAHFIELCAQRNIPLVFLQNISGFMVGRKYEAGGIAK 1176
            MAVL+S ++ RG+ F +N   M+ALV DLR +VA   LGG AK+R++H +RGKLLPRDR++ L+DPG+PFLEFSQLAAYG+Y+D++  AGI+TGVGRV+GQECVIV NDAT+KGGTY+P+TVKKHLRAQE+A +N LPCIYLVDSGGANLPNQ E+FPDR+HFG+IFYNQANMSA GI Q+AVVMGSCTAGGAYVPAMSDE+IIVRNQGTIFLGGPPLVKAATGE+VSAEDLGGADVHSRISGVTDHYAMND HAL++ARR+VGNLNR K  + A++   DP +  A+L GVIP++ +  YDVREVIAR+VDGSEFDEFK LYGTTLV GFA I GYPVGI+ANNGILFSESA KGAHF+ELC+QR IPLVFLQNI+GFMVGRKYEAGGIAK
Sbjct:    1 MAVLTSALDTRGEEFARNREAMQALVGDLRDKVAQVKLGGGAKARDKHTARGKLLPRDRVQALLDPGSPFLEFSQLAAYGLYNDEVASAGIITGVGRVSGQECVIVANDATVKGGTYFPMTVKKHLRAQEIAQQNRLPCIYLVDSGGANLPNQDEVFPDRDHFGRIFYNQANMSAQGIAQVAVVMGSCTAGGAYVPAMSDEAIIVRNQGTIFLGGPPLVKAATGEVVSAEDLGGADVHSRISGVTDHYAMNDRHALALARRVVGNLNRSKTPQAALRASADPRYAAADLYGVIPSDPRKPYDVREVIARVVDGSEFDEFKALYGTTLVCGFARIFGYPVGIVANNGILFSESAQKGAHFVELCSQRGIPLVFLQNITGFMVGRKYEAGGIAK 392          
BLAST of mRNA_P-wetherbeei_contig6678.1.1 vs. uniprot
Match: A0A154VC34_9PROT (Methylcrotonoyl-CoA carboxylase n=1 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154VC34_9PROT)

HSP 1 Score: 616 bits (1589), Expect = 5.910e-218
Identity = 301/392 (76.79%), Postives = 346/392 (88.27%), Query Frame = 1
Query:    1 MAVLSSIINVRGDAFKKNAAHMEALVADLRARVAVTSLGGNAKSRERHVSRGKLLPRDRIENLIDPGAPFLEFSQLAAYGMYDDDIHGAGILTGVGRVAGQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAIGIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEIVSAEDLGGADVHSRISGVTDHYAMNDAHALSIARRIVGNLNRRKQAKLAVQPPRDPAFDIAELNGVIPANAQAQYDVREVIARIVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESAVKGAHFIELCAQRNIPLVFLQNISGFMVGRKYEAGGIAK 1176
            M++L S IN R +AF++N A M ALV DL+A+V    LGG  K+RERH+SRGKLLPR+R+  L+D G+PFLE SQ+AA+G+Y DDI  AGI+TG+GRV+GQECVIV NDAT+KGGTY+P+TVKKHLRAQE+A EN+LPC+YLVDSGGANLPNQ E+FPDR+HFG+IF+NQANMSA GIPQIAVVMGSCTAGGAYVPAMSDESIIV+ QGTIFLGGPPLVKAATGE+V+AEDLGGADVHSR SGVTDHYA NDAHALSIAR+IVGNLNR KQ  + ++  R P +D AEL GV+P + +  YDVRE IARIVDGSEFDEFK+LYG TLVTGFAH+ GYPVGI+ANNGILFSESA+KGAHFIELCAQR IPLVFLQNI+GFMVGRKYEAGGIAK
Sbjct:    1 MSILKSQINTRSEAFRENEAAMRALVDDLKAKVQQVKLGGGEKARERHLSRGKLLPRERVRTLLDVGSPFLELSQMAAHGVYGDDIPAAGIITGIGRVSGQECVIVANDATVKGGTYFPLTVKKHLRAQEIARENNLPCVYLVDSGGANLPNQDEVFPDRDHFGRIFFNQANMSAEGIPQIAVVMGSCTAGGAYVPAMSDESIIVKGQGTIFLGGPPLVKAATGEVVTAEDLGGADVHSRTSGVTDHYAQNDAHALSIARKIVGNLNRAKQPNVTLREARPPLYDPAELYGVVPTDLRKPYDVREAIARIVDGSEFDEFKQLYGQTLVTGFAHLFGYPVGIIANNGILFSESALKGAHFIELCAQRGIPLVFLQNITGFMVGRKYEAGGIAK 392          
BLAST of mRNA_P-wetherbeei_contig6678.1.1 vs. uniprot
Match: A0A2E2QM37_9PROT (Methylcrotonoyl-CoA carboxylase n=6 Tax=Sneathiella TaxID=510690 RepID=A0A2E2QM37_9PROT)

HSP 1 Score: 613 bits (1581), Expect = 9.710e-217
Identity = 297/392 (75.77%), Postives = 340/392 (86.73%), Query Frame = 1
Query:    1 MAVLSSIINVRGDAFKKNAAHMEALVADLRARVAVTSLGGNAKSRERHVSRGKLLPRDRIENLIDPGAPFLEFSQLAAYGMYDDDIHGAGILTGVGRVAGQECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANLPNQAEIFPDRNHFGQIFYNQANMSAIGIPQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEIVSAEDLGGADVHSRISGVTDHYAMNDAHALSIARRIVGNLNRRKQAKLAVQPPRDPAFDIAELNGVIPANAQAQYDVREVIARIVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFSESAVKGAHFIELCAQRNIPLVFLQNISGFMVGRKYEAGGIAK 1176
            M+VL S +N R D FK NAA M ALV DL+ +VA   LGG  ++RE+H+SRGKLLPR+R+  L+DPG+PFLEFSQ+AA+ MY  DIH AGI+TG+GRV G+EC+I+CNDAT+KGGTYYP+TVKKHLRAQEVA+EN LPCIYLVDSGGANLPNQ ++FPDR+HFG+ FYNQANMSA+GIPQIAVVMGSCTAGGAYVPAM DESIIVRNQGTIFL GPPLVKAATGE+VSAEDLGGA+VHSRISGVTDH A ND HAL IARR V + NR K   L V+ P  P +D  E+ G+IP + +  +DVRE+IARIVDGS+FDEFKK YGTTLVTGFAHIHGYPVGILANNGILFSESAVKGAHFIELC QRNIPL+FLQNI+GFMVG+KYE+GGIAK
Sbjct:    1 MSVLKSDLNTRSDDFKTNAAQMTALVEDLKEKVATIKLGGGERAREKHLSRGKLLPRERVRKLLDPGSPFLEFSQMAAWDMYSGDIHSAGIITGIGRVEGRECIIICNDATVKGGTYYPLTVKKHLRAQEVALENRLPCIYLVDSGGANLPNQQDVFPDRDHFGRSFYNQANMSALGIPQIAVVMGSCTAGGAYVPAMCDESIIVRNQGTIFLAGPPLVKAATGEVVSAEDLGGAEVHSRISGVTDHMAENDTHALQIARRCVASFNRPKPMPLEVRKPAPPLYDPKEIYGLIPKDMRTPFDVREIIARIVDGSDFDEFKKNYGTTLVTGFAHIHGYPVGILANNGILFSESAVKGAHFIELCCQRNIPLIFLQNITGFMVGQKYESGGIAK 392          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6678.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TXC1_9PROT3.340e-25488.01Methylcrotonoyl-CoA carboxylase (Fragment) n=1 Tax... [more]
A0A353LS26_9PROT1.570e-24686.99Methylcrotonoyl-CoA carboxylase (Fragment) n=4 Tax... [more]
A0A352KAW3_9PROT7.160e-24586.99Methylcrotonoyl-CoA carboxylase n=6 Tax=Alphaprote... [more]
I3TNS5_TISMK5.390e-22177.81Carboxyltransferase subunit of acetyl-CoA carboxyl... [more]
A0A3M1JUI7_9PROT4.400e-22076.79Methylcrotonoyl-CoA carboxylase n=1 Tax=Alphaprote... [more]
UPI00146CDB4F7.230e-21976.79methylcrotonoyl-CoA carboxylase n=2 Tax=Sneathiell... [more]
A0A437QIH0_9PROT1.030e-21877.55Methylcrotonoyl-CoA carboxylase n=1 Tax=Hwanghaeel... [more]
A0A2U1WQY8_9PROT4.160e-21876.53Methylcrotonoyl-CoA carboxylase n=1 Tax=Azospirill... [more]
A0A154VC34_9PROT5.910e-21876.79Methylcrotonoyl-CoA carboxylase n=1 Tax=Oceanibacu... [more]
A0A2E2QM37_9PROT9.710e-21775.77Methylcrotonoyl-CoA carboxylase n=6 Tax=Sneathiell... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6678contigP-wetherbeei_contig6678:3..1178 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1110502.TMO_2575
PFAMsCarboxyl_trans
Model size1176
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00367,RC00942
KEGG koko:K01969
KEGG ReactionR04138
KEGG Pathwayko00280,ko01100,map00280,map01100
KEGG ModuleM00036
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.83e-222
EggNOG OGsCOG4799@1|root,COG4799@2|Bacteria,1MVAX@1224|Proteobacteria,2TRA0@28211|Alphaproteobacteria,2JQ2J@204441|Rhodospirillales
EC6.4.1.4
DescriptionAcetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
Cds size1176
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186929.316457-CDS-P-wetherbeei_contig6678:2..11781683186929.316457-CDS-P-wetherbeei_contig6678:2..1178Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6678 3..1178 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6678.1.1prot_P-wetherbeei_contig6678.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6678 3..1178 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6678.1.1

>prot_P-wetherbeei_contig6678.1.1 ID=prot_P-wetherbeei_contig6678.1.1|Name=mRNA_P-wetherbeei_contig6678.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=392bp
MAVLSSIINVRGDAFKKNAAHMEALVADLRARVAVTSLGGNAKSRERHVS
RGKLLPRDRIENLIDPGAPFLEFSQLAAYGMYDDDIHGAGILTGVGRVAG
QECVIVCNDATIKGGTYYPITVKKHLRAQEVAMENHLPCIYLVDSGGANL
PNQAEIFPDRNHFGQIFYNQANMSAIGIPQIAVVMGSCTAGGAYVPAMSD
ESIIVRNQGTIFLGGPPLVKAATGEIVSAEDLGGADVHSRISGVTDHYAM
NDAHALSIARRIVGNLNRRKQAKLAVQPPRDPAFDIAELNGVIPANAQAQ
YDVREVIARIVDGSEFDEFKKLYGTTLVTGFAHIHGYPVGILANNGILFS
ESAVKGAHFIELCAQRNIPLVFLQNISGFMVGRKYEAGGIAK
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mRNA from alignment at P-wetherbeei_contig6678:3..1178-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6678.1.1 ID=mRNA_P-wetherbeei_contig6678.1.1|Name=mRNA_P-wetherbeei_contig6678.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1176bp|location=Sequence derived from alignment at P-wetherbeei_contig6678:3..1178- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGTGCTTTCCAGTATTATCAATGTGCGCGGCGATGCGTTCAAGAA GAACGCCGCGCATATGGAGGCGTTGGTTGCCGATTTGCGCGCCAGGGTGG CGGTTACGTCGCTGGGCGGCAATGCCAAATCGCGCGAGCGGCATGTGTCG CGCGGTAAATTGCTGCCGCGTGACCGGATTGAAAATCTGATTGATCCGGG TGCGCCATTTCTGGAATTCAGCCAGCTTGCCGCCTATGGCATGTATGACG ATGATATTCACGGCGCGGGTATTCTGACCGGCGTTGGCCGCGTGGCCGGG CAGGAATGCGTGATCGTATGCAATGATGCGACGATCAAGGGCGGCACCTA TTACCCGATAACGGTGAAGAAACATCTGCGCGCCCAGGAAGTGGCGATGG AAAACCATCTGCCATGTATTTATCTGGTGGATAGCGGCGGCGCGAACCTG CCCAACCAGGCGGAAATTTTTCCCGACCGCAATCATTTCGGGCAGATATT TTATAACCAGGCGAATATGTCGGCGATTGGCATTCCGCAGATTGCCGTGG TGATGGGGTCATGCACAGCGGGCGGGGCCTATGTGCCGGCCATGAGCGAT GAGAGCATTATCGTGCGCAACCAGGGCACGATTTTTCTGGGCGGGCCGCC GCTGGTAAAGGCGGCAACGGGCGAAATTGTATCCGCCGAAGATCTGGGCG GCGCGGATGTGCATTCGCGCATCAGTGGCGTGACCGATCATTATGCGATG AATGACGCGCATGCGCTATCGATTGCGCGGCGCATTGTTGGTAATCTCAA TCGTCGCAAACAGGCAAAGCTGGCAGTGCAGCCGCCGCGCGATCCGGCTT TTGATATTGCGGAACTGAACGGCGTCATTCCCGCGAATGCGCAGGCCCAA TATGATGTACGCGAAGTGATTGCACGCATTGTGGATGGCAGCGAATTTGA CGAATTCAAAAAACTGTACGGTACGACGCTGGTTACGGGATTTGCGCATA TTCACGGCTATCCGGTTGGCATCCTGGCCAATAACGGCATTTTGTTTTCG GAATCCGCCGTGAAGGGCGCACATTTCATTGAACTGTGTGCGCAGCGTAA CATTCCGCTGGTATTCTTGCAGAATATTTCGGGCTTCATGGTTGGGCGCA AATATGAAGCGGGCGGCATTGCCAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6678:3..1178-

>mRNA_P-wetherbeei_contig6678.1.1 ID=mRNA_P-wetherbeei_contig6678.1.1|Name=mRNA_P-wetherbeei_contig6678.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1176bp|location=Sequence derived from alignment at P-wetherbeei_contig6678:3..1178- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGTGCTTTCCAGTATTATCAATGTGCGCGGCGATGCGTTCAAGAA
GAACGCCGCGCATATGGAGGCGTTGGTTGCCGATTTGCGCGCCAGGGTGG
CGGTTACGTCGCTGGGCGGCAATGCCAAATCGCGCGAGCGGCATGTGTCG
CGCGGTAAATTGCTGCCGCGTGACCGGATTGAAAATCTGATTGATCCGGG
TGCGCCATTTCTGGAATTCAGCCAGCTTGCCGCCTATGGCATGTATGACG
ATGATATTCACGGCGCGGGTATTCTGACCGGCGTTGGCCGCGTGGCCGGG
CAGGAATGCGTGATCGTATGCAATGATGCGACGATCAAGGGCGGCACCTA
TTACCCGATAACGGTGAAGAAACATCTGCGCGCCCAGGAAGTGGCGATGG
AAAACCATCTGCCATGTATTTATCTGGTGGATAGCGGCGGCGCGAACCTG
CCCAACCAGGCGGAAATTTTTCCCGACCGCAATCATTTCGGGCAGATATT
TTATAACCAGGCGAATATGTCGGCGATTGGCATTCCGCAGATTGCCGTGG
TGATGGGGTCATGCACAGCGGGCGGGGCCTATGTGCCGGCCATGAGCGAT
GAGAGCATTATCGTGCGCAACCAGGGCACGATTTTTCTGGGCGGGCCGCC
GCTGGTAAAGGCGGCAACGGGCGAAATTGTATCCGCCGAAGATCTGGGCG
GCGCGGATGTGCATTCGCGCATCAGTGGCGTGACCGATCATTATGCGATG
AATGACGCGCATGCGCTATCGATTGCGCGGCGCATTGTTGGTAATCTCAA
TCGTCGCAAACAGGCAAAGCTGGCAGTGCAGCCGCCGCGCGATCCGGCTT
TTGATATTGCGGAACTGAACGGCGTCATTCCCGCGAATGCGCAGGCCCAA
TATGATGTACGCGAAGTGATTGCACGCATTGTGGATGGCAGCGAATTTGA
CGAATTCAAAAAACTGTACGGTACGACGCTGGTTACGGGATTTGCGCATA
TTCACGGCTATCCGGTTGGCATCCTGGCCAATAACGGCATTTTGTTTTCG
GAATCCGCCGTGAAGGGCGCACATTTCATTGAACTGTGTGCGCAGCGTAA
CATTCCGCTGGTATTCTTGCAGAATATTTCGGGCTTCATGGTTGGGCGCA
AATATGAAGCGGGCGGCATTGCCAAG
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